Gene Symbol | usp39 |
Entrez Gene ID | 790924 |
Full Name | ubiquitin specific peptidase 39 |
Synonyms | wu:fb54d10,wu:fb79f05,zgc:158428 |
General protein information |
|
Gene Type | protein-coding |
Organism | Danio rerio(zebrafish) |
ORF » Species Summary » Danio rerio » usp39 cDNA ORF clone
Gene Symbol | usp39 |
Entrez Gene ID | 790924 |
Full Name | ubiquitin specific peptidase 39 |
Synonyms | wu:fb54d10,wu:fb79f05,zgc:158428 |
General protein information |
|
Gene Type | protein-coding |
Organism | Danio rerio(zebrafish) |
mRNA | Protein | Name |
---|---|---|
NM_001080070.1 | NP_001073539.1 | U4/U6.U5 tri-snRNP-associated protein 2 |
Homo sapiens (human) | USP39 | NP_006581.2 |
Canis lupus familiaris (dog) | USP39 | XP_532977.1 |
Bos taurus (cattle) | USP39 | NP_001094615.1 |
Caenorhabditis elegans (roundworm) | F09D1.1 | NP_494298.1 |
Rattus norvegicus (Norway rat) | Usp39 | NP_001100067.1 |
Gallus gallus (chicken) | USP39 | XP_003643514.2 |
Magnaporthe oryzae (rice blast fungus) | MGG_08169 | XP_003715141.1 |
Danio rerio (zebrafish) | usp39 | NP_001073539.1 |
Neurospora crassa | NCU09547 | XP_958766.2 |
Arabidopsis thaliana (thale cress) | AT4G22350 | NP_193966.2 |
Mus musculus (house mouse) | Usp39 | NP_613058.1 |
Drosophila melanogaster (fruit fly) | CG7288 | NP_573334.1 |
Anopheles gambiae (African malaria mosquito) | AgaP_AGAP008381 | XP_317070.4 |
Schizosaccharomyces pombe (fission yeast) | ubp10 | NP_595305.1 |
Arabidopsis thaliana (thale cress) | AT4G22285 | NP_001078426.1 |
Pan troglodytes (chimpanzee) | USP39 | XP_515591.2 |
USP39 | XP_001089375.1 | |
Oryza sativa (rice) | Os09g0407900 | NP_001063139.1 |
Xenopus tropicalis (tropical clawed frog) | usp39 | XP_002932588.1 |
Importance of deubiquitinases in zebrafish craniofacial development.
Tse WKF
Biochemical and biophysical research communications487(4)813-819(2017 06)
Gene evolution and gene expression after whole genome duplication in fish: the PhyloFish database.
Pasquier J, Cabau C, Nguyen T, Jouanno E, Severac D, Braasch I, Journot L, Pontarotti P, Klopp C, Postlethwait JH, Guiguen Y, Bobe J
BMC genomics17368(2016 05)
RFX transcription factors are essential for hearing in mice.
Elkon R, Milon B, Morrison L, Shah M, Vijayakumar S, Racherla M, Leitch CC, Silipino L, Hadi S, Weiss-Gayet M, Barras E, Schmid CD, Ait-Lounis A, Barnes A, Song Y, Eisenman DJ, Eliyahu E, Frolenkov GI, Strome SE, Durand B, Zaghloul NA, Jones SM, Reith W, Hertzano R
Nature communications68549(2015 Oct)
Zebrafish usp39 mutation leads to rb1 mRNA splicing defect and pituitary lineage expansion.
R?os Y, Melmed S, Lin S, Liu NA
PLoS genetics7(1)e1001271(2011 Jan)
Genome-wide loss-of-function analysis of deubiquitylating enzymes for zebrafish development.
Tse WK, Eisenhaber B, Ho SH, Ng Q, Eisenhaber F, Jiang YJ
BMC genomics10637(2009 Dec)
GeneRIFs: Gene References Into Functions What's a GeneRIF?
Zebrafish usp39 regulates embryonic pituitary homeostasis by targeting rb1 and e2f4 expression, respectively, contributing to increased adenohypophyseal sensitivity to these altered cell cycle regulators
Title: Zebrafish usp39 mutation leads to rb1 mRNA splicing defect and pituitary lineage expansion.
The following usp39 gene cDNA ORF clone sequences were retrieved from the NCBI Reference Sequence Database (RefSeq). These sequences represent the protein coding region of the usp39 cDNA ORF which is encoded by the open reading frame (ORF) sequence. ORF sequences can be delivered in our standard vector, pcDNA3.1+/C-(K)DYK or the vector of your choice as an expression/transfection-ready ORF clone. Not the clone you want? Click here to find your clone.
CloneID | ODa34465 | |
Clone ID Related Accession (Same CDS sequence) | NM_001080070.1 | |
Accession Version | NM_001080070.1 Latest version! | Documents for ORF clone product in default vector |
Sequence Information | ORF Nucleotide Sequence (Length: 1494bp) Protein sequence SNP |
|
Vector | pcDNA3.1-C-(k)DYK or customized vector | User Manual |
Clone information | Clone Map | MSDS |
Tag on pcDNA3.1+/C-(K)DYK | C terminal DYKDDDDK tags | |
ORF Insert Method | CloneEZ™ Seamless cloning technology | |
Insert Structure | linear | |
Update Date | 2018-11-23 | |
Organism | Danio rerio(zebrafish) | |
Product | U4/U6.U5 tri-snRNP-associated protein 2 | |
Comment | Comment: PROVISIONAL REFSEQ: This record has not yet been subject to final NCBI review. The reference sequence was derived from BC128868.1. On Mar 11, 2007 this sequence version replaced XM_688504.2. ##Evidence-Data-START## Transcript exon combination :: BC128868.1 [ECO:0000332] RNAseq introns :: single sample supports all introns SAMEA2168446, SAMEA2168447 [ECO:0000348] ##Evidence-Data-END## |
1 | ATGATCAGAG GCGTGAAACG GGAGAGGGAT TTTGATGAAG ACGAAGAGGA AGAAGTGCGT |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
RefSeq | NP_001073539.1 |
CDS | 76..1569 |
Translation |
Target ORF information:
Target ORF information:
|
NM_001080070.1 |
1 | ATGATCAGAG GCGTGAAACG GGAGAGGGAT TTTGATGAAG ACGAAGAGGA AGAAGTGCGT |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
Importance of deubiquitinases in zebrafish craniofacial development. |
Gene evolution and gene expression after whole genome duplication in fish: the PhyloFish database. |
RFX transcription factors are essential for hearing in mice. |
Zebrafish usp39 mutation leads to rb1 mRNA splicing defect and pituitary lineage expansion. |
Genome-wide loss-of-function analysis of deubiquitylating enzymes for zebrafish development. |