Gene Symbol | sco1 |
Entrez Gene ID | 796572 |
Full Name | SCO1 cytochrome c oxidase assembly protein |
General protein information |
|
Gene Type | protein-coding |
Organism | Danio rerio(zebrafish) |
ORF » Species Summary » Danio rerio » sco1 cDNA ORF clone
gRNAs
Gene Symbol | sco1 |
Entrez Gene ID | 796572 |
Full Name | SCO1 cytochrome c oxidase assembly protein |
General protein information |
|
Gene Type | protein-coding |
Organism | Danio rerio(zebrafish) |
mRNA | Protein | Name |
---|---|---|
NM_001309798.1 | NP_001296727.1 | protein SCO1 homolog, mitochondrial |
Canis lupus familiaris (dog) | SCO1 | XP_546624.3 |
Bos taurus (cattle) | SCO1 | NP_001073712.1 |
Drosophila melanogaster (fruit fly) | Scox | NP_608884.1 |
Schizosaccharomyces pombe (fission yeast) | sco1 | NP_595287.1 |
Oryza sativa (rice) | Os02g0159700 | NP_001045964.1 |
Mus musculus (house mouse) | Sco1 | NP_001035115.1 |
Danio rerio (zebrafish) | LOC796572 | XP_005164365.1 |
Anopheles gambiae (African malaria mosquito) | AgaP_AGAP008774 | XP_314900.3 |
Caenorhabditis elegans (roundworm) | sco-1 | NP_494755.1 |
Saccharomyces cerevisiae (baker's yeast) | SCO1 | NP_009593.1 |
Homo sapiens (human) | SCO1 | NP_004580.1 |
Rattus norvegicus (Norway rat) | Sco1 | NP_001166845.1 |
Gallus gallus (chicken) | SCO1 | XP_004946120.1 |
Xenopus tropicalis (tropical clawed frog) | LOC100494754 | XP_002937049.2 |
LOC722074 | XP_001118271.1 | |
Magnaporthe oryzae (rice blast fungus) | MGG_03006 | XP_003720686.1 |
Neurospora crassa | NCU03177 | XP_964583.2 |
Arabidopsis thaliana (thale cress) | AT3G08950 | NP_566339.1 |
Pan troglodytes (chimpanzee) | SCO1 | XP_001164786.1 |
Kluyveromyces lactis | KLLA0D03630g | XP_453226.1 |
Eremothecium gossypii | AGOS_AEL191C | NP_984670.2 |
Evolution of complexity in the zebrafish synapse proteome.
Bay?s ?, Collins MO, Reig-Viader R, Gou G, Goulding D, Izquierdo A, Choudhary JS, Emes RD, Grant SG
Nature communications814613(2017 Mar)
Gene evolution and gene expression after whole genome duplication in fish: the PhyloFish database.
Pasquier J, Cabau C, Nguyen T, Jouanno E, Severac D, Braasch I, Journot L, Pontarotti P, Klopp C, Postlethwait JH, Guiguen Y, Bobe J
BMC genomics17368(2016 05)
GeneRIFs: Gene References Into Functions What's a GeneRIF?
The following sco1 gene cDNA ORF clone sequences were retrieved from the NCBI Reference Sequence Database (RefSeq). These sequences represent the protein coding region of the sco1 cDNA ORF which is encoded by the open reading frame (ORF) sequence. ORF sequences can be delivered in our standard vector, pcDNA3.1+/C-(K)DYK or the vector of your choice as an expression/transfection-ready ORF clone. Not the clone you want? Click here to find your clone.
CloneID | ODa08987 | |
Clone ID Related Accession (Same CDS sequence) | NM_001309798.1 | |
Accession Version | NM_001309798.1 Latest version! | Documents for ORF clone product in default vector |
Sequence Information | ORF Nucleotide Sequence (Length: 957bp) Protein sequence SNP |
|
Vector | pcDNA3.1-C-(k)DYK or customized vector | ![]() |
Clone information | Clone Map | ![]() |
Tag on pcDNA3.1+/C-(K)DYK | C terminal DYKDDDDK tags | |
ORF Insert Method | CloneEZ™ Seamless cloning technology | |
Insert Structure | linear | |
Update Date | 2019-10-21 | |
Organism | Danio rerio(zebrafish) | |
Product | protein SCO1 homolog, mitochondrial | |
Comment | Comment: VALIDATED REFSEQ: This record has undergone validation or preliminary review. The reference sequence was derived from CABZ01040209.1, EH501659.1 and EH527884.1. On Jun 12, 2015 this sequence version replaced XM_005164308.2. Sequence Note: This RefSeq record was created from transcript and genomic sequence data to make the sequence consistent with the reference genome assembly. The genomic coordinates used for the transcript record were based on transcript alignments. ##Evidence-Data-START## Transcript exon combination :: GDQQ01002899.1 [ECO:0000332] RNAseq introns :: single sample supports all introns SAMEA2168446, SAMEA2168447 [ECO:0000348] ##Evidence-Data-END## ##RefSeq-Attributes-START## gene product(s) localized to mito. :: inferred from homology ##RefSeq-Attributes-END## |
1 | ATGCGGGGCT CAGATGGTCA CTTCCGCGTA GCTGATGTGC TGACTGTTAG CACCATGAGT |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
RefSeq | NP_001296727.1 |
CDS | 101..1057 |
Translation |
Target ORF information:
Target ORF information:
|
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1 | ATGCGGGGCT CAGATGGTCA CTTCCGCGTA GCTGATGTGC TGACTGTTAG CACCATGAGT |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
Evolution of complexity in the zebrafish synapse proteome. |
Gene evolution and gene expression after whole genome duplication in fish: the PhyloFish database. |