Gene Symbol | ry |
Entrez Gene ID | 41605 |
Full Name | rosy |
Synonyms | CG7642,Dmel\CG7642,Ry,XDH,XOR,Xdh,Xdh/ry,xdh |
General protein information |
|
Gene Type | protein-coding |
Organism | Drosophila melanogaster(fruit fly) |
Genome |
ORF » Species Summary » Drosophila melanogaster » ry cDNA ORF clone
Gene Symbol | ry |
Entrez Gene ID | 41605 |
Full Name | rosy |
Synonyms | CG7642,Dmel\CG7642,Ry,XDH,XOR,Xdh,Xdh/ry,xdh |
General protein information |
|
Gene Type | protein-coding |
Organism | Drosophila melanogaster(fruit fly) |
Genome |
mRNA | Protein | Name |
---|---|---|
NM_079613.3 | NP_524337.1 | rosy |
Pan troglodytes (chimpanzee) | XDH | XP_525729.2 |
Canis lupus familiaris (dog) | XDH | XP_540143.2 |
Bos taurus (cattle) | XDH | NP_776397.1 |
Gallus gallus (chicken) | XDH | NP_990458.1 |
Drosophila melanogaster (fruit fly) | ry | NP_524337.1 |
Arabidopsis thaliana (thale cress) | XDH1 | NP_195215.2 |
Oryza sativa (rice) | Os03g0429800 | NP_001050420.1 |
Homo sapiens (human) | XDH | NP_000370.2 |
Danio rerio (zebrafish) | xdh | XP_688983.3 |
Caenorhabditis elegans (roundworm) | F55B11.1 | NP_502747.1 |
Arabidopsis thaliana (thale cress) | XDH2 | NP_195216.2 |
Magnaporthe oryzae (rice blast fungus) | MGG_12738 | XP_003716708.1 |
Neurospora crassa | NCU03350 | XP_956459.2 |
Rattus norvegicus (Norway rat) | Xdh | NP_058850.1 |
Xenopus tropicalis (tropical clawed frog) | LOC100497499 | XP_004914866.1 |
XDH | XP_002808080.1 | |
Mus musculus (house mouse) | Xdh | NP_035853.2 |
Anopheles gambiae (African malaria mosquito) | AgaP_AGAP007918 | XP_317568.3 |
Gene Model Annotations for Drosophila melanogaster: Impact of High-Throughput Data.
Matthews BB, Dos Santos G, Crosby MA, Emmert DB, St Pierre SE, Gramates LS, Zhou P, Schroeder AJ, Falls K, Strelets V, Russo SM, Gelbart WM,
G3 (Bethesda, Md.)5(8)1721-36(2015 Jun)
Gene Model Annotations for Drosophila melanogaster: The Rule-Benders.
Crosby MA, Gramates LS, Dos Santos G, Matthews BB, St Pierre SE, Zhou P, Schroeder AJ, Falls K, Emmert DB, Russo SM, Gelbart WM,
G3 (Bethesda, Md.)5(8)1737-49(2015 Jun)
Sequence finishing and mapping of Drosophila melanogaster heterochromatin.
Hoskins RA, Carlson JW, Kennedy C, Acevedo D, Evans-Holm M, Frise E, Wan KH, Park S, Mendez-Lago M, Rossi F, Villasante A, Dimitri P, Karpen GH, Celniker SE
Science (New York, N.Y.)316(5831)1625-8(2007 Jun)
The Release 5.1 annotation of Drosophila melanogaster heterochromatin.
Smith CD, Shu S, Mungall CJ, Karpen GH
Science (New York, N.Y.)316(5831)1586-91(2007 Jun)
Combined evidence annotation of transposable elements in genome sequences.
Quesneville H, Bergman CM, Andrieu O, Autard D, Nouaud D, Ashburner M, Anxolabehere D
PLoS computational biology1(2)166-75(2005 Jul)
GeneRIFs: Gene References Into Functions What's a GeneRIF?
Xdh appears to be fixing more A/T mutations than G/C mutations in most lineages, leading to evolution of higher A/T content in the recent past.
Title: Molecular population genetics of Xdh and the evolution of base composition in Drosophila.
expression in Aspergillus nidulans and properties
Title: Expression of Drosophila melanogaster xanthine dehydrogenase in Aspergillus nidulans and some properties of the recombinant enzyme.
The following ry gene cDNA ORF clone sequences were retrieved from the NCBI Reference Sequence Database (RefSeq). These sequences represent the protein coding region of the ry cDNA ORF which is encoded by the open reading frame (ORF) sequence. ORF sequences can be delivered in our standard vector, pcDNA3.1+/C-(K)DYK or the vector of your choice as an expression/transfection-ready ORF clone. Not the clone you want? Click here to find your clone.
CloneID | OFa04758 | |
Clone ID Related Accession (Same CDS sequence) | NM_079613.3 | |
Accession Version | NM_079613.3 Latest version! | Documents for ORF clone product in default vector |
Sequence Information | ORF Nucleotide Sequence (Length: 4008bp) Protein sequence SNP |
|
Vector | pcDNA3.1-C-(k)DYK or customized vector | User Manual |
Clone information | Clone Map | MSDS |
Tag on pcDNA3.1+/C-(K)DYK | C terminal DYKDDDDK tags | |
ORF Insert Method | CloneEZ™ Seamless cloning technology | |
Insert Structure | linear | |
Update Date | 2019-04-24 | |
Organism | Drosophila melanogaster(fruit fly) | |
Product | rosy | |
Comment | Comment: REVIEWED REFSEQ: This record has been curated by FlyBase. This record is derived from an annotated genomic sequence (NT_033777). On Jan 16, 2013 this sequence version replaced NM_079613.2. ##Genome-Annotation-Data-START## Annotation Provider :: FlyBase Annotation Status :: Full annotation Annotation Version :: Release 6.26 URL :: http://flybase.org ##Genome-Annotation-Data-END## |
1 | ATGTCTAACT CGGTTTTGGT GTTTTTCGTG AATGGAAAGA AGGTGACCGA AGTGTCGCCT |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
RefSeq | NP_524337.1 |
CDS | 239..4246 |
Translation |
Target ORF information:
Target ORF information:
|
NM_079613.3 |
1 | ATGTCTAACT CGGTTTTGGT GTTTTTCGTG AATGGAAAGA AGGTGACCGA AGTGTCGCCT |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
Gene Model Annotations for Drosophila melanogaster: Impact of High-Throughput Data. |
Gene Model Annotations for Drosophila melanogaster: The Rule-Benders. |
Sequence finishing and mapping of Drosophila melanogaster heterochromatin. |
The Release 5.1 annotation of Drosophila melanogaster heterochromatin. |
Combined evidence annotation of transposable elements in genome sequences. |