Gene Symbol | smp-30 |
Entrez Gene ID | 41786 |
Full Name | Senescence marker protein-30 |
Synonyms | CG7390,CT22723,Dca,Dmel\CG7390,Smp-30 |
General protein information |
|
Gene Type | protein-coding |
Organism | Drosophila melanogaster(fruit fly) |
Genome |
ORF » Species Summary » Drosophila melanogaster » smp-30 cDNA ORF clone
Gene Symbol | smp-30 |
Entrez Gene ID | 41786 |
Full Name | Senescence marker protein-30 |
Synonyms | CG7390,CT22723,Dca,Dmel\CG7390,Smp-30 |
General protein information |
|
Gene Type | protein-coding |
Organism | Drosophila melanogaster(fruit fly) |
Genome |
mRNA | Protein | Name |
---|---|---|
NM_169602.2 | NP_731942.1 | senescence marker protein-30, isoform B |
NM_079629.4 | NP_524353.2 | senescence marker protein-30, isoform A |
NM_001275652.1 | NP_001262581.1 | senescence marker protein-30, isoform D |
NM_001275651.1 | NP_001262580.1 | senescence marker protein-30, isoform C |
Drosophila melanogaster (fruit fly) | regucalcin | NP_727588.2 |
Kluyveromyces lactis | KLLA0F04301g | XP_455274.1 |
Eremothecium gossypii | AGOS_ABL098W | NP_982849.1 |
Bos taurus (cattle) | RGN | NP_776382.1 |
Homo sapiens (human) | RGN | NP_004674.1 |
RGN | XP_001090835.1 | |
Mus musculus (house mouse) | Rgn | NP_033086.1 |
Danio rerio (zebrafish) | rgn | NP_991309.1 |
Drosophila melanogaster (fruit fly) | smp-30 | NP_731942.1 |
Saccharomyces cerevisiae (baker's yeast) | YBR053C | NP_009609.1 |
Magnaporthe oryzae (rice blast fungus) | MGG_05015 | XP_003712519.1 |
Neurospora crassa | NCU00326 | XP_957797.1 |
Xenopus tropicalis (tropical clawed frog) | rgn | NP_001006822.1 |
Pan troglodytes (chimpanzee) | RGN | XP_003317492.1 |
Canis lupus familiaris (dog) | RGN | XP_538011.3 |
Rattus norvegicus (Norway rat) | Rgn | NP_113734.1 |
Gallus gallus (chicken) | RGN | NP_990060.1 |
Gene Model Annotations for Drosophila melanogaster: Impact of High-Throughput Data.
Matthews BB, Dos Santos G, Crosby MA, Emmert DB, St Pierre SE, Gramates LS, Zhou P, Schroeder AJ, Falls K, Strelets V, Russo SM, Gelbart WM,
G3 (Bethesda, Md.)5(8)1721-36(2015 Jun)
Gene Model Annotations for Drosophila melanogaster: The Rule-Benders.
Crosby MA, Gramates LS, Dos Santos G, Matthews BB, St Pierre SE, Zhou P, Schroeder AJ, Falls K, Emmert DB, Russo SM, Gelbart WM,
G3 (Bethesda, Md.)5(8)1737-49(2015 Jun)
Sequence finishing and mapping of Drosophila melanogaster heterochromatin.
Hoskins RA, Carlson JW, Kennedy C, Acevedo D, Evans-Holm M, Frise E, Wan KH, Park S, Mendez-Lago M, Rossi F, Villasante A, Dimitri P, Karpen GH, Celniker SE
Science (New York, N.Y.)316(5831)1625-8(2007 Jun)
The Release 5.1 annotation of Drosophila melanogaster heterochromatin.
Smith CD, Shu S, Mungall CJ, Karpen GH
Science (New York, N.Y.)316(5831)1586-91(2007 Jun)
Combined evidence annotation of transposable elements in genome sequences.
Quesneville H, Bergman CM, Andrieu O, Autard D, Nouaud D, Ashburner M, Anxolabehere D
PLoS computational biology1(2)166-75(2005 Jul)
GeneRIFs: Gene References Into Functions What's a GeneRIF?
Dca is a candidate for climatic adaptation in D. melanogaster.
Title: Molecular basis of adaptive shift in body size in Drosophila melanogaster: functional and sequence analyses of the Dca gene.
Molecular evolution of Dca has been affected by its implication in the adaptive response to cold temperatures.
Title: The Dca gene involved in cold adaptation in Drosophila melanogaster arose by duplication of the ancestral regucalcin gene.
Genetic variation in senescence marker protein-30 is associated with natural variation in cold tolerance in Drosophila
Title: Genetic variation in senescence marker protein-30 is associated with natural variation in cold tolerance in Drosophila.
The following smp-30 gene cDNA ORF clone sequences were retrieved from the NCBI Reference Sequence Database (RefSeq). These sequences represent the protein coding region of the smp-30 cDNA ORF which is encoded by the open reading frame (ORF) sequence. ORF sequences can be delivered in our standard vector, pcDNA3.1+/C-(K)DYK or the vector of your choice as an expression/transfection-ready ORF clone. Not the clone you want? Click here to find your clone.
CloneID | OFa04898 | |
Clone ID Related Accession (Same CDS sequence) | NM_169602.2 , NM_079629.4 , NM_001275652.1 | |
Accession Version | NM_169602.2 Latest version! | Documents for ORF clone product in default vector |
Sequence Information | ORF Nucleotide Sequence (Length: 912bp) Protein sequence SNP |
|
Vector | pcDNA3.1-C-(k)DYK or customized vector | User Manual |
Clone information | Clone Map | MSDS |
Tag on pcDNA3.1+/C-(K)DYK | C terminal DYKDDDDK tags | |
ORF Insert Method | CloneEZ™ Seamless cloning technology | |
Insert Structure | linear | |
Update Date | 2019-04-24 | |
Organism | Drosophila melanogaster(fruit fly) | |
Product | senescence marker protein-30, isoform B | |
Comment | Comment: REVIEWED REFSEQ: This record has been curated by FlyBase. This record is derived from an annotated genomic sequence (NT_033777). On Jan 16, 2013 this sequence version replaced NM_169602.1. ##Genome-Annotation-Data-START## Annotation Provider :: FlyBase Annotation Status :: Full annotation Annotation Version :: Release 6.26 URL :: http://flybase.org ##Genome-Annotation-Data-END## |
1 | ATGTCATACA AGGTTGAAGC TGTTCCCGAT TCCTACGCCG CCCTGGGCGA GGGACCCCAC |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
RefSeq | NP_731942.1 |
CDS | 53..964 |
Translation |
Target ORF information:
Target ORF information:
|
NM_169602.2 |
1 | ATGTCATACA AGGTTGAAGC TGTTCCCGAT TCCTACGCCG CCCTGGGCGA GGGACCCCAC |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
CloneID | OFa04898 | |
Clone ID Related Accession (Same CDS sequence) | NM_169602.2 , NM_079629.4 , NM_001275652.1 | |
Accession Version | NM_079629.4 Latest version! | Documents for ORF clone product in default vector |
Sequence Information | ORF Nucleotide Sequence (Length: 912bp) Protein sequence SNP |
|
Vector | pcDNA3.1-C-(k)DYK or customized vector | User Manual |
Clone information | Clone Map | MSDS |
Tag on pcDNA3.1+/C-(K)DYK | C terminal DYKDDDDK tags | |
ORF Insert Method | CloneEZ™ Seamless cloning technology | |
Insert Structure | linear | |
Update Date | 2019-04-24 | |
Organism | Drosophila melanogaster(fruit fly) | |
Product | senescence marker protein-30, isoform A | |
Comment | Comment: REVIEWED REFSEQ: This record has been curated by FlyBase. This record is derived from an annotated genomic sequence (NT_033777). On Jan 16, 2013 this sequence version replaced NM_079629.3. ##Genome-Annotation-Data-START## Annotation Provider :: FlyBase Annotation Status :: Full annotation Annotation Version :: Release 6.26 URL :: http://flybase.org ##Genome-Annotation-Data-END## |
1 | ATGTCATACA AGGTTGAAGC TGTTCCCGAT TCCTACGCCG CCCTGGGCGA GGGACCCCAC |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
RefSeq | NP_524353.2 |
CDS | 53..964 |
Translation |
Target ORF information:
Target ORF information:
|
NM_079629.4 |
1 | ATGTCATACA AGGTTGAAGC TGTTCCCGAT TCCTACGCCG CCCTGGGCGA GGGACCCCAC |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
CloneID | OFa04898 | |
Clone ID Related Accession (Same CDS sequence) | NM_169602.2 , NM_079629.4 , NM_001275652.1 | |
Accession Version | NM_001275652.1 Latest version! | Documents for ORF clone product in default vector |
Sequence Information | ORF Nucleotide Sequence (Length: 912bp) Protein sequence SNP |
|
Vector | pcDNA3.1-C-(k)DYK or customized vector | User Manual |
Clone information | Clone Map | MSDS |
Tag on pcDNA3.1+/C-(K)DYK | C terminal DYKDDDDK tags | |
ORF Insert Method | CloneEZ™ Seamless cloning technology | |
Insert Structure | linear | |
Update Date | 2019-04-24 | |
Organism | Drosophila melanogaster(fruit fly) | |
Product | senescence marker protein-30, isoform D | |
Comment | Comment: REVIEWED REFSEQ: This record has been curated by FlyBase. This record is derived from an annotated genomic sequence (NT_033777). ##Genome-Annotation-Data-START## Annotation Provider :: FlyBase Annotation Status :: Full annotation Annotation Version :: Release 6.26 URL :: http://flybase.org ##Genome-Annotation-Data-END## |
1 | ATGTCATACA AGGTTGAAGC TGTTCCCGAT TCCTACGCCG CCCTGGGCGA GGGACCCCAC |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
RefSeq | NP_001262581.1 |
CDS | 322..1233 |
Translation |
Target ORF information:
Target ORF information:
|
NM_001275652.1 |
1 | ATGTCATACA AGGTTGAAGC TGTTCCCGAT TCCTACGCCG CCCTGGGCGA GGGACCCCAC |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
CloneID | OFa07782 | |
Clone ID Related Accession (Same CDS sequence) | NM_001275651.1 | |
Accession Version | NM_001275651.1 Latest version! | Documents for ORF clone product in default vector |
Sequence Information | ORF Nucleotide Sequence (Length: 921bp) Protein sequence SNP |
|
Vector | pcDNA3.1-C-(k)DYK or customized vector | User Manual |
Clone information | Clone Map | MSDS |
Tag on pcDNA3.1+/C-(K)DYK | C terminal DYKDDDDK tags | |
ORF Insert Method | CloneEZ™ Seamless cloning technology | |
Insert Structure | linear | |
Update Date | 2019-04-24 | |
Organism | Drosophila melanogaster(fruit fly) | |
Product | senescence marker protein-30, isoform C | |
Comment | Comment: REVIEWED REFSEQ: This record has been curated by FlyBase. This record is derived from an annotated genomic sequence (NT_033777). ##Genome-Annotation-Data-START## Annotation Provider :: FlyBase Annotation Status :: Full annotation Annotation Version :: Release 6.26 URL :: http://flybase.org ##Genome-Annotation-Data-END## |
1 | ATGACACAAA TGTCATACAA GGTTGAAGCT GTTCCCGATT CCTACGCCGC CCTGGGCGAG |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
RefSeq | NP_001262580.1 |
CDS | 118..1038 |
Translation |
Target ORF information:
Target ORF information:
|
NM_001275651.1 |
1 | ATGACACAAA TGTCATACAA GGTTGAAGCT GTTCCCGATT CCTACGCCGC CCTGGGCGAG |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
Gene Model Annotations for Drosophila melanogaster: Impact of High-Throughput Data. |
Gene Model Annotations for Drosophila melanogaster: The Rule-Benders. |
Sequence finishing and mapping of Drosophila melanogaster heterochromatin. |
The Release 5.1 annotation of Drosophila melanogaster heterochromatin. |
Combined evidence annotation of transposable elements in genome sequences. |