| Anopheles gambiae (African malaria mosquito) |
AgaP_AGAP005021 |
XP_001231045.2 |
| Caenorhabditis elegans (roundworm) |
spt-5 |
NP_502283.1 |
| Xenopus tropicalis (tropical clawed frog) |
supt5h |
NP_001123796.1 |
| Canis lupus familiaris (dog) |
SUPT5H |
XP_005616644.1 |
| Mus musculus (house mouse) |
Supt5 |
NP_038704.1 |
| Gallus gallus (chicken) |
SUPT5H |
NP_001026555.1 |
| Neurospora crassa |
NCU06929 |
XP_959276.2 |
|
SUPT5H |
XP_001088495.1 |
| Bos taurus (cattle) |
SUPT5H |
NP_001076908.2 |
| Rattus norvegicus (Norway rat) |
Supt5h |
NP_001100967.2 |
| Schizosaccharomyces pombe (fission yeast) |
spt5 |
NP_593191.1 |
| Arabidopsis thaliana (thale cress) |
AT2G34210 |
NP_180968.2 |
| Oryza sativa (rice) |
Os02g0772000 |
NP_001173159.1 |
| Saccharomyces cerevisiae (baker's yeast) |
SPT5 |
NP_013703.1 |
| Eremothecium gossypii |
AGOS_ADR187W |
NP_984283.2 |
| Homo sapiens (human) |
SUPT5H |
NP_001104490.1 |
| Pan troglodytes (chimpanzee) |
SUPT5H |
XP_512652.3 |
| Danio rerio (zebrafish) |
supt5h |
NP_571748.2 |
| Drosophila melanogaster (fruit fly) |
Spt5 |
NP_652610.1 |
| Kluyveromyces lactis |
KLLA0B00891g |
XP_451570.1 |
| Magnaporthe oryzae (rice blast fungus) |
MGG_12268 |
XP_003715018.1 |
| Arabidopsis thaliana (thale cress) |
GTA2 |
NP_192575.3 |
Related articles in PubMed
Gene Model Annotations for Drosophila melanogaster: Impact of High-Throughput Data.
Matthews BB, Dos Santos G, Crosby MA, Emmert DB, St Pierre SE, Gramates LS, Zhou P, Schroeder AJ, Falls K, Strelets V, Russo SM, Gelbart WM,
G3 (Bethesda, Md.)5(8)1721-36(2015 Jun)
Gene Model Annotations for Drosophila melanogaster: The Rule-Benders.
Crosby MA, Gramates LS, Dos Santos G, Matthews BB, St Pierre SE, Zhou P, Schroeder AJ, Falls K, Emmert DB, Russo SM, Gelbart WM,
G3 (Bethesda, Md.)5(8)1737-49(2015 Jun)
Sequence finishing and mapping of Drosophila melanogaster heterochromatin.
Hoskins RA, Carlson JW, Kennedy C, Acevedo D, Evans-Holm M, Frise E, Wan KH, Park S, Mendez-Lago M, Rossi F, Villasante A, Dimitri P, Karpen GH, Celniker SE
Science (New York, N.Y.)316(5831)1625-8(2007 Jun)
The Release 5.1 annotation of Drosophila melanogaster heterochromatin.
Smith CD, Shu S, Mungall CJ, Karpen GH
Science (New York, N.Y.)316(5831)1586-91(2007 Jun)
Combined evidence annotation of transposable elements in genome sequences.
Quesneville H, Bergman CM, Andrieu O, Autard D, Nouaud D, Ashburner M, Anxolabehere D
PLoS computational biology1(2)166-75(2005 Jul)
GeneRIFs: Gene References Into Functions What's a GeneRIF?
The following Spt5 gene cDNA ORF clone sequences were retrieved from the NCBI Reference Sequence Database (RefSeq). These sequences represent the protein coding region of the Spt5 cDNA ORF which is encoded by the open reading frame (ORF) sequence. ORF sequences can be delivered in our standard vector, pcDNA3.1+/C-(K)DYK or the vector of your choice as an expression/transfection-ready ORF clone. Not the clone you want? Click here to find your clone.
| CloneID |
OFa11527 |
| Clone ID Related Accession (Same CDS sequence) |
NM_144353.4
|
| Accession Version |
NM_144353.4 Latest version! |
Documents for ORF clone product in default vector |
| Sequence Information |
ORF Nucleotide Sequence (Length: 3237bp)
Protein sequence
SNP |
| Vector |
pcDNA3.1+/C-(K)DYK or customized vector |
 User Manual |
| Clone information |
Clone Map |
MSDS |
| Tag on pcDNA3.1+/C-(K)DYK |
C terminal DYKDDDDK tags |
| ORF Insert Method |
CloneEZ™ Seamless cloning technology |
| Insert Structure |
linear |
| Update Date |
2019-04-24 |
| Organism |
Drosophila melanogaster(fruit fly) |
| Product |
Spt5 |
| Comment |
Comment: REVIEWED REFSEQ: This record has been curated by FlyBase. This record is derived from an annotated genomic sequence (NT_033778). On Jul 15, 2014 this sequence version replaced NM_144353.3.
##Genome-Annotation-Data-START##
Annotation Provider :: FlyBase
Annotation Status :: Full annotation
Annotation Version :: Release 6.26
URL :: http://flybase.org
##Genome-Annotation-Data-END##
|
1
61
121
181
241
301
361
421
481
541
601
661
721
781
841
901
961
1021
1081
1141
1201
1261
1321
1381
1441
1501
1561
1621
1681
1741
1801
1861
1921
1981
2041
2101
2161
2221
2281
2341
2401
2461
2521
2581
2641
2701
2761
2821
2881
2941
3001
3061
3121
3181
| ATGTCGGACT CGGAAGTCAG TAATATGTCG GATAGTGGCT CCGAAGATGG ATCCATTTCC
AACAAGTCGC AACGGAGTGC CCGCTCCAAG TCAAGATCGC GTTCCAGGTC CGGTTCCAGG
GGATCTCGCT CCGTTTCCAG GTCCAGATCA CGCTCTCAAT CGGGCCACTC TAGATCTGGC
TCGGAATCTC CACAGAGACG AGATAATCGC GGCAAGAGCG ATGAATCCGG CGAAGAGGAG
GAGGAGCCAC CAGGTGAGGA CATCGATTCC GAGGAGTACG ATGAGGAGGA GAACGACGAT
CACCCAAGGA AGAAGAAAAA GAAGGAGCGT TTTGGGGGCT TCATCATTGA CGAGGCCGAA
GTGGACGATG AAGTCGATGA AGATGACGAG TGGGAAGAGG GTGCCAATGA AATTGGCATT
GTTGGCAATG AGATCGATGA GCTGGGCCCC ACAGCCAGGG ATATTGAAAT TCGACGACGA
GGCACAAACC TTTGGGACAC TCAAAAGGAG GACGAGATAG AGGAGTATCT CCGTAAGAAG
TACGCCGATG AGTCAATTGC AAAACGCCAC TTTGGAGATG GCGGTGAAGA GATGTCAGAC
GAAATTACCC AACAAACTCT ATTGCCCGGC ATCAAGGATC CCAATTTGTG GATGGTGAAA
TGTCGTATAG GCGAGGAGAA GGCCACAGCG CTTCTTCTAA TGCGAAAGTA CTTAACCTAC
CTGAACACAG ACGATCCATT GCAAATCAAA TCTATTATTG CACCAGAGGG CGTCAAGGGA
TACATTTACC TGGAGGCCTA TAAGCAGACT CATGTTAAAA CTTGCATTGA TAACGTGGGT
AATCTTCGGA TGGGCAAATG GAAACAGGAA ATGGTGCCCA TCAAGGAGAT GACGGATGTG
CTAAAGGTGG TCAAGGAGCA GGTTGGCCTT AAAGTGAAAC AATGGGTGCG CTTGAAGCGC
GGTCTCTACA AGGACGACAT CGCACAGGTG GACTACGTGG ATCTGGCCCA GAACCAAGTA
CATCTTAAGT TGCTTCCTCG CATTGACTAC ACACGCATGC GAGGAGCCTT GCGAACAACA
GCAACGGAGA GTGACGATAG CAAGCGCAAG AAGAAACGCC GCCCAGCAGC TAAACCTTTT
GATCCAGAGG CCGTAAGGGC AATTGGAGGT GAAGTACACT CAGATGGTGA TTTCCTGCTC
TTCGAGGGAA ACCGGTATTC GCGAAAGGGA TTCCTGTATA AAAACTTTAC CATGTCGGCC
ATTCTCTCGG ACGGTGTAAA GCCCACTTTA GCCGAGCTAG AACGCTTTGA AGAATCTCCG
GAAGAGGTAA ACTTGGAAAT TATGGGCACC GTGAAGGATG ATCCCACTAT GGCTCACTCA
TTCTCAATGG GCGACAATGT GGAAGTCTGC GTGGGTGATT TGGAAAACTT ACAGGCCAAG
ATTGTGGCTA TTGACGGCAC CATGATTACT GTCATGCCCA AACATCAGGA TTTAAAGGAT
CCTTTGATTT TCAAAGCCAG TGAGCTGCGC AAATACTTCA AAACAGGAGA TCACGCCAGA
GTGTTGGCTG GTCGTTACGA AGGCGAAACT GGCCTCATTA TTCGCGTCGA GCCTACAAGA
GTGGTGCTCG TCTCCGATCT AACCAATCAC GAGTTGGAGG TGCTGCCAAG GGACTTGCAA
CTGTGCTCGG ATGTGGCCAC AGGTGTGGAT TGTCTCGGCC AGTTTCAATG GGGAGATATG
GTGCAACTGG ATTCCCAGAA TGTGGGTGTC ATAGTGCGTT TGGAGAGGGA GAATTTCCAT
GTCTTGGGCA TGAATGGCAA GTGCATCGAG TGCAAGCCAA CTGCATTGCA CAAGCGAAAG
GAGAACCGTC ATACGGTGGC TCTGGATGCA GATCAAAACC AAATCCGCCG GCGCGATGTA
GTCAAGGTGA TGGAGGGACC CCATGCAGGA CGTTCCGGCG AGATCAAGCA TTTGTATCGC
AGTCTGGCCT TTCTCCATTG CCGCATGTAC ACGGAGAACG GTGGAATATT TGTGTGCAAG
ACTAGGCATT TGCAGTTGGC TGGAGGCAGC AAGACTACCG TTAGTAATGC CGGCATTGTG
GGCGGCCTAG GATTTATGTC GCCGCGCATT CAATCGCCCA TGCATCCATC CGGTGGTCGT
GGAGCTCGTG GTGGCGCCCG TGGTGGACGA GGTGGTTTCC GAGTGACCCG TGACCGTGAG
ATCTTGGGTA AAACCATTAA GATTAGTGGA GGACCTTATA AGGGCGCCGT GGGAATTGTG
AAGGATGCCA CCGAGAGCAC GGCTCGTGTG GAACTGCATA CCTCATGCCA GACGATTTCG
GTAGACCGGA ATCACATTGC CATTGTGGGA GTTACCGGTA AAGAGGGCAG TGTCTCCACA
TATGGACGCA CCCCAGCTCG CACTCCCGGC TACGGTGCCC AGACTCCCAG TTATACCGCT
GCCGGATCGA AAACTCCGTT GGTGGGAAGC CAGACGCCCA ACTGGGATAC GGATACTCGT
ACTCCTTATG GTACAATGAC ACCATCGCAC GATGGCAGCA TGACACCACG TCATGGCGCT
TGGGATCCCA CGGCAAACAC AACGCCGGCC AGGAACAACG ATTTCGATTA CTCCCTTGAG
GAGCCCAGTC CCAGCCCTGG ATACAATCCA AGTACCCCTG GCTATCAAAT GACTTCCCAG
TTTGCCCCGC AAACTCCTGG CACTCTGTAT GGATCGGACA GAAGCTACAG TCCATTCAAT
CCCAGCCCCA GTCCTGCTCC GTCGCCGTAT CCCGTTGGTT ACATGAACAC TCCGTCGCCA
TCGACTTATT CACCGAATAC TCCTGGTGGC ATACCGCAGT CGCCGTACAA TCCGCAGACC
CCTGGAGCCA GTCTGGACTC GTCGATGGGC GACTGGTGTA CCACAGACAT TGAAGTTCGG
ATTCACACGC ACGACGACAC CGATCTCGTT GGGCAAACGG GCATCATTCG CACCGTTTCG
AACGGCGTCT GCTCCGTATT CCTGCGCCAG GAGGATCGCA GTGTGTCCAT CGTTAGTGAG
CACTTGGCGC CAGTGCTACC ATGCAATGGC GACGAATTCA AGATCATCTA CGGCGATGAC
CGCGAGTCCG TGGGCAGAGT GCTGTCCAAG GATGGCGATG TGTTCGTCTG CAGGATTAAC
GAGGAAATCA AGCTGCTACC GATTAACTTC CTCTGCAAGA TGAAGTCCAT CGACTAA |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
| RefSeq |
NP_652610.1 |
| CDS | 117..3353 |
| Translation | |
Target ORF information:
| RefSeq Version | NM_144353.4 |
| Organism | Drosophila melanogaster(fruit fly) |
| Definition | Drosophila melanogaster Spt5 (Spt5), mRNA. |
Target ORF information:
| Epitope | DYKDDDDK |
| Bacterial selection | AMPR |
| Mammalian selection | NeoR |
| Vector | pcDNA3.1+/C-(K)DYK |
|
 NM_144353.4 |
ORF Insert Sequence:
1
61
121
181
241
301
361
421
481
541
601
661
721
781
841
901
961
1021
1081
1141
1201
1261
1321
1381
1441
1501
1561
1621
1681
1741
1801
1861
1921
1981
2041
2101
2161
2221
2281
2341
2401
2461
2521
2581
2641
2701
2761
2821
2881
2941
3001
3061
3121
3181
| ATGTCGGACT CGGAAGTCAG TAATATGTCG GATAGTGGCT CCGAAGATGG ATCCATTTCC
AACAAGTCGC AACGGAGTGC CCGCTCCAAG TCAAGATCGC GTTCCAGGTC CGGTTCCAGG
GGATCTCGCT CCGTTTCCAG GTCCAGATCA CGCTCTCAAT CGGGCCACTC TAGATCTGGC
TCGGAATCTC CACAGAGACG AGATAATCGC GGCAAGAGCG ATGAATCCGG CGAAGAGGAG
GAGGAGCCAC CAGGTGAGGA CATCGATTCC GAGGAGTACG ATGAGGAGGA GAACGACGAT
CACCCAAGGA AGAAGAAAAA GAAGGAGCGT TTTGGGGGCT TCATCATTGA CGAGGCCGAA
GTGGACGATG AAGTCGATGA AGATGACGAG TGGGAAGAGG GTGCCAATGA AATTGGCATT
GTTGGCAATG AGATCGATGA GCTGGGCCCC ACAGCCAGGG ATATTGAAAT TCGACGACGA
GGCACAAACC TTTGGGACAC TCAAAAGGAG GACGAGATAG AGGAGTATCT CCGTAAGAAG
TACGCCGATG AGTCAATTGC AAAACGCCAC TTTGGAGATG GCGGTGAAGA GATGTCAGAC
GAAATTACCC AACAAACTCT ATTGCCCGGC ATCAAGGATC CCAATTTGTG GATGGTGAAA
TGTCGTATAG GCGAGGAGAA GGCCACAGCG CTTCTTCTAA TGCGAAAGTA CTTAACCTAC
CTGAACACAG ACGATCCATT GCAAATCAAA TCTATTATTG CACCAGAGGG CGTCAAGGGA
TACATTTACC TGGAGGCCTA TAAGCAGACT CATGTTAAAA CTTGCATTGA TAACGTGGGT
AATCTTCGGA TGGGCAAATG GAAACAGGAA ATGGTGCCCA TCAAGGAGAT GACGGATGTG
CTAAAGGTGG TCAAGGAGCA GGTTGGCCTT AAAGTGAAAC AATGGGTGCG CTTGAAGCGC
GGTCTCTACA AGGACGACAT CGCACAGGTG GACTACGTGG ATCTGGCCCA GAACCAAGTA
CATCTTAAGT TGCTTCCTCG CATTGACTAC ACACGCATGC GAGGAGCCTT GCGAACAACA
GCAACGGAGA GTGACGATAG CAAGCGCAAG AAGAAACGCC GCCCAGCAGC TAAACCTTTT
GATCCAGAGG CCGTAAGGGC AATTGGAGGT GAAGTACACT CAGATGGTGA TTTCCTGCTC
TTCGAGGGAA ACCGGTATTC GCGAAAGGGA TTCCTGTATA AAAACTTTAC CATGTCGGCC
ATTCTCTCGG ACGGTGTAAA GCCCACTTTA GCCGAGCTAG AACGCTTTGA AGAATCTCCG
GAAGAGGTAA ACTTGGAAAT TATGGGCACC GTGAAGGATG ATCCCACTAT GGCTCACTCA
TTCTCAATGG GCGACAATGT GGAAGTCTGC GTGGGTGATT TGGAAAACTT ACAGGCCAAG
ATTGTGGCTA TTGACGGCAC CATGATTACT GTCATGCCCA AACATCAGGA TTTAAAGGAT
CCTTTGATTT TCAAAGCCAG TGAGCTGCGC AAATACTTCA AAACAGGAGA TCACGCCAGA
GTGTTGGCTG GTCGTTACGA AGGCGAAACT GGCCTCATTA TTCGCGTCGA GCCTACAAGA
GTGGTGCTCG TCTCCGATCT AACCAATCAC GAGTTGGAGG TGCTGCCAAG GGACTTGCAA
CTGTGCTCGG ATGTGGCCAC AGGTGTGGAT TGTCTCGGCC AGTTTCAATG GGGAGATATG
GTGCAACTGG ATTCCCAGAA TGTGGGTGTC ATAGTGCGTT TGGAGAGGGA GAATTTCCAT
GTCTTGGGCA TGAATGGCAA GTGCATCGAG TGCAAGCCAA CTGCATTGCA CAAGCGAAAG
GAGAACCGTC ATACGGTGGC TCTGGATGCA GATCAAAACC AAATCCGCCG GCGCGATGTA
GTCAAGGTGA TGGAGGGACC CCATGCAGGA CGTTCCGGCG AGATCAAGCA TTTGTATCGC
AGTCTGGCCT TTCTCCATTG CCGCATGTAC ACGGAGAACG GTGGAATATT TGTGTGCAAG
ACTAGGCATT TGCAGTTGGC TGGAGGCAGC AAGACTACCG TTAGTAATGC CGGCATTGTG
GGCGGCCTAG GATTTATGTC GCCGCGCATT CAATCGCCCA TGCATCCATC CGGTGGTCGT
GGAGCTCGTG GTGGCGCCCG TGGTGGACGA GGTGGTTTCC GAGTGACCCG TGACCGTGAG
ATCTTGGGTA AAACCATTAA GATTAGTGGA GGACCTTATA AGGGCGCCGT GGGAATTGTG
AAGGATGCCA CCGAGAGCAC GGCTCGTGTG GAACTGCATA CCTCATGCCA GACGATTTCG
GTAGACCGGA ATCACATTGC CATTGTGGGA GTTACCGGTA AAGAGGGCAG TGTCTCCACA
TATGGACGCA CCCCAGCTCG CACTCCCGGC TACGGTGCCC AGACTCCCAG TTATACCGCT
GCCGGATCGA AAACTCCGTT GGTGGGAAGC CAGACGCCCA ACTGGGATAC GGATACTCGT
ACTCCTTATG GTACAATGAC ACCATCGCAC GATGGCAGCA TGACACCACG TCATGGCGCT
TGGGATCCCA CGGCAAACAC AACGCCGGCC AGGAACAACG ATTTCGATTA CTCCCTTGAG
GAGCCCAGTC CCAGCCCTGG ATACAATCCA AGTACCCCTG GCTATCAAAT GACTTCCCAG
TTTGCCCCGC AAACTCCTGG CACTCTGTAT GGATCGGACA GAAGCTACAG TCCATTCAAT
CCCAGCCCCA GTCCTGCTCC GTCGCCGTAT CCCGTTGGTT ACATGAACAC TCCGTCGCCA
TCGACTTATT CACCGAATAC TCCTGGTGGC ATACCGCAGT CGCCGTACAA TCCGCAGACC
CCTGGAGCCA GTCTGGACTC GTCGATGGGC GACTGGTGTA CCACAGACAT TGAAGTTCGG
ATTCACACGC ACGACGACAC CGATCTCGTT GGGCAAACGG GCATCATTCG CACCGTTTCG
AACGGCGTCT GCTCCGTATT CCTGCGCCAG GAGGATCGCA GTGTGTCCAT CGTTAGTGAG
CACTTGGCGC CAGTGCTACC ATGCAATGGC GACGAATTCA AGATCATCTA CGGCGATGAC
CGCGAGTCCG TGGGCAGAGT GCTGTCCAAG GATGGCGATG TGTTCGTCTG CAGGATTAAC
GAGGAAATCA AGCTGCTACC GATTAACTTC CTCTGCAAGA TGAAGTCCAT CGACTAA |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
 |
Gene Model Annotations for Drosophila melanogaster: Impact of High-Throughput Data.
G3 (Bethesda, Md.)5(8)1721-36(2015 Jun)
Matthews BB,Dos Santos G,Crosby MA,Emmert DB,St Pierre SE,Gramates LS,Zhou P,Schroeder AJ,Falls K,Strelets V,Russo SM,Gelbart WM, |
|
Gene Model Annotations for Drosophila melanogaster: The Rule-Benders.
G3 (Bethesda, Md.)5(8)1737-49(2015 Jun)
Crosby MA,Gramates LS,Dos Santos G,Matthews BB,St Pierre SE,Zhou P,Schroeder AJ,Falls K,Emmert DB,Russo SM,Gelbart WM, |
|
Sequence finishing and mapping of Drosophila melanogaster heterochromatin.
Science (New York, N.Y.)316(5831)1625-8(2007 Jun)
Hoskins RA,Carlson JW,Kennedy C,Acevedo D,Evans-Holm M,Frise E,Wan KH,Park S,Mendez-Lago M,Rossi F,Villasante A,Dimitri P,Karpen GH,Celniker SE |
