| Gene Symbol |
CCDC80 |
| Entrez Gene ID |
395074 |
| Full Name |
coiled-coil domain containing 80 |
| Synonyms |
cequarin,equarin-S |
| General protein information |
- Preferred Names
coiled-coil domain containing 80
Names
coiled-coil domain-containing protein 80
coiled-coil domain-containing protein 80oiled-coil domain-containing protein 80
equarin
equarin-L
|
| Gene Type |
protein-coding |
| Organism |
Gallus gallus(chicken) |
mRNA and Protein(s)
| mRNA |
Protein |
Name |
| NM_204431.1 |
NP_989762.1 |
coiled-coil domain-containing protein 80 precursor |
| Homo sapiens (human) |
CCDC80 |
NP_955805.1 |
| Mus musculus (house mouse) |
Ccdc80 |
NP_080715.2 |
| Danio rerio (zebrafish) |
ccdc80 |
NP_001007199.1 |
| Canis lupus familiaris (dog) |
CCDC80 |
XP_005639700.1 |
| Rattus norvegicus (Norway rat) |
Ccdc80 |
NP_071988.2 |
| Pan troglodytes (chimpanzee) |
CCDC80 |
XP_001156251.2 |
|
CCDC80 |
XP_002802691.1 |
| Bos taurus (cattle) |
CCDC80 |
NP_001092452.1 |
| Gallus gallus (chicken) |
CCDC80 |
NP_989762.1 |
Related articles in PubMed
Multiple roles of Equarin during lens development.
Song X, Tanaka H, Ohta K
Development, growth & differentiation56(3)199-205(2014 Apr)
Equarin is involved in cell adhesion by means of heparan sulfate proteoglycan during lens development.
Song X, Sato Y, Sekiguchi K, Tanaka H, Ohta K
Developmental dynamics : an official publication of the American Association of Anatomists242(1)23-9(2013 Jan)
Equarin is involved as an FGF signaling modulator in chick lens differentiation.
Song X, Sato Y, Felemban A, Ito A, Hossain M, Ochiai H, Yamamoto T, Sekiguchi K, Tanaka H, Ohta K
Developmental biology368(1)109-17(2012 Aug)
A balance of FGF and BMP signals regulates cell cycle exit and Equarin expression in lens cells.
Jarrin M, Pandit T, Gunhaga L
Molecular biology of the cell23(16)3266-74(2012 Aug)
Equarin, a novel soluble molecule expressed with polarity at chick embryonic lens equator, is involved in eye formation.
Mu H, Ohta K, Kuriyama S, Shimada N, Tanihara H, Yasuda K, Tanaka H
Mechanisms of development120(2)143-55(2003 Feb)
GeneRIFs: Gene References Into Functions What's a GeneRIF?
The following CCDC80 gene cDNA ORF clone sequences were retrieved from the NCBI Reference Sequence Database (RefSeq). These sequences represent the protein coding region of the CCDC80 cDNA ORF which is encoded by the open reading frame (ORF) sequence. ORF sequences can be delivered in our standard vector, pcDNA3.1+/C-(K)DYK or the vector of your choice as an expression/transfection-ready ORF clone. Not the clone you want? Click here to find your clone.
| CloneID |
OGa27088 |
| Clone ID Related Accession (Same CDS sequence) |
NM_204431.1
|
| Accession Version |
NM_204431.1 Latest version! |
Documents for ORF clone product in default vector |
| Sequence Information |
ORF Nucleotide Sequence (Length: 2877bp)
Protein sequence
SNP |
| Vector |
pcDNA3.1+/C-(K)DYK or customized vector |
 User Manual |
| Clone information |
Clone Map |
MSDS |
| Tag on pcDNA3.1+/C-(K)DYK |
C terminal DYKDDDDK tags |
| ORF Insert Method |
CloneEZ™ Seamless cloning technology |
| Insert Structure |
linear |
| Update Date |
2019-12-25 |
| Organism |
Gallus gallus(chicken) |
| Product |
coiled-coil domain-containing protein 80 precursor |
| Comment |
Comment: PROVISIONAL REFSEQ: This record has not yet been subject to final NCBI review. The reference sequence was derived from AB086824.1.
##Evidence-Data-START##
Transcript exon combination :: AB086824.1 [ECO:0000332]
##Evidence-Data-END##
|
1
61
121
181
241
301
361
421
481
541
601
661
721
781
841
901
961
1021
1081
1141
1201
1261
1321
1381
1441
1501
1561
1621
1681
1741
1801
1861
1921
1981
2041
2101
2161
2221
2281
2341
2401
2461
2521
2581
2641
2701
2761
2821
| ATGAACTGGA TGCCAGCTCT CAGCTTAGCC CTGCTGTGGA CAGCATGGCT AGTTTGTGGC
TCGGAGAAGA CAGGGAGGTT AGCAGAGAGA GGGAGCCATG GAGTTAGGAA AGTGCCTCAG
TCTCACAGGG CTCCAAGCAG CCTCCTGAGA AGGTCTGGAG CATCCCTAAA GAATCTGAGC
CCCAGTCCCC AACACCCGGT CACCAAGAGA GATTCTTCAG TACCTCCAAA GGCACCTGCC
AACCTCCTGA AAGAGGAATC ACGTTCCCAG CCCAGGAGCG TAGGCACCAG AACAAGGCGG
TTACAGAGAC TCACAGCTGC AGCCAAATAC TCCAAGTCTG AGATGATTAA GGATGAAGGG
ATATCTACCG CCTCACAGTC ACGAGCAGTA CGCTTCCCTT CAGGGTCAAG CTCCCCCAAT
GTCTTGGCCA GCTTTGCTGG GAAAAATCGG GTGTGGGTCA TTTCTGCCCC CCATGCCTCA
GAGGGCTACT ACCGGCTCAT GATGAGCCTG CTGAAAAATG ATGTTTACTG TGAACTGGCT
GAGAGACACA TCCAGCAGAT TGTGTTGTTC CATGAAGAAG GGGAAGAAGG AGGGAAAGTC
AGAAGGATAA CCAATGAAGG AAAAATCTTG GAACAGCCAC TGGATCCTGC TCTCATCCCT
AAGCTCATGA GCTTTCTGAA ACTAGAAAAG GGGAAATTTG GCATGGTGCT GCTGAAGAAA
ACTCTACAGG TGGAGGAAAG GTACCCTTAT CCCGTAAGGC TAGAGGCCAT GTATGAGGTC
ATTGATCAGA ACCCCATCAG AAAAATTGAG AAGATGAGAC AGAAGGGTTT CATACAGACT
TGCAAAGCAG CTGGGGTGGA GGGACAGGTG GTTGAAGATG ACAATAATGG GGGTAGCACC
CAATCTATCC CTGGTGGTGG ACATGTCCAA GTGTCAGCAG GAGGGAGGAA GGAGGAACCA
AGGAGGAGCA GCAACCAGCC AACAAGGACC AAAACAGTGA GAAAACCGAT GACAACCACT
GTGGCTACTC CTCTGCCTAC AGTAAGGACC ACTACCCTCC CTACCACCAC CACAGCCACC
CGGGCCACCA CCCGCACAGT GACAACAGCA AGCAGGCCTA CAACAACAAC TACACCCCTC
CCCACCACGC AGAGGACATG GACCACAAAG TCACATACCA CCACAGAGTA CCATAGGCTG
CCAGCATCTC CTGAGGTCAC CACACCGCGA GTCATGGCCT CTGAGGATTT CTATTCTCCT
GTGTGGAAGG CAAATCGCAG GGACCGGCAG CGAGGCCACC CAGAGAAACA CCTGGCAGCC
ACACGGAAAC CAAGCAAAGG TGGCCGCTAT GAGAGCTTCA CAGAAGTCCC AACAGCCCCC
TCAGTGCACT ACACAAAGGC AAGCATGAGT AGGTTTAAAG ATAATCGAAC AGACAGGAAG
GACTATAACC ACAGGGACCT GAATGTCACG CCAGGGCAAC ACAAACCGAC TAAGACTAAA
CCACCAAAAA AGAAGACACA AGAGAAGATA CTGAGTAATG AATATGAAGA TAAATATGAC
CCAAGTAAGC CTGCTAGTCC CCATTTAGAG GAAGAGATTG CAGTGGGAAG TATTCCCCCA
AAGAAAGGAA AAGAATCAAA GAAGCATGAG CGAATGGATA AACCTGAGAA GAAAAAGAAG
AAGGACAGAC CTGACAAGCT GCACAAGAGT GAGAAGCAGT CCAAGAAGGA CAAAGCTGAG
AAAAAGAGCA AGCAGGATAA AGACCGTAGC AAAAAAAACA AGAAGGGGAG CAGAACAGAG
AATGAGGATT TCCCCAAGCC CAACAAGAAG CCTTTCTTAC AGCCTCCCAG GAAATCGGTG
GCCAACCTCC TGGACTATTT TGAAGGCAAA AGGCGGCTCA TTCTGATTAC AACCCCCAAG
GCGGACAACA CCATGTATGT TCAGCAGCGA GACGAGTATC TGGAGAGCTT CTGCAAGATG
GCAACAAGGA AAATCTCAGT CATTACAATT TTTGGCACCA TGAACAACAG CAGCATGAAA
ATTGACCACT TCCAGCTAGA TAACGAAAAG CCCATGAAAG TGATAGAGGA TGAAGATCTT
GTGGATCAGC AGCTCATCAG TGAGCTGAGG AAAGAGTATG GGATGACCTA CAATGACTTC
TTCATGGTGC TGACGGACAC TGACATGAAG GTCAAGCAAT ACTATGAAGT ACCTATAGCA
ATGAAGTCTG TGTTTGATTT GATCGACACC TTCCAGTCAC GAATTAAAGA CATGGAAAGA
CAGAAAAAAG AGGGCATTGT CTGCAAAGAA GATAAAAAGC AATCCCTTGA GAGCTTCTTA
TCCAGGTTCC GATGGAGAAG GCGGCTAGTG GTGATCTCTG CTCCCAGTGA TGAGGACTGG
GCTTATTCCC AGCAGCTTGC TGCTCTCAGT GGACAAGCCT GTAATTTTGG TCTGCGCCAT
ATAACTATCC TCAAGTTGCT AGGAGTTGGA GAAGATATTG GTGGTGTCTT AGAGTTGTAT
CCAATTAATG GAAGTGCTAC TGTAGACCGA GAAGATATCC CAGCTAACTT GGTGAAAGAC
ATTCGAAATT ATTTCCAAAT TAGCCCAGAG TATTTCTCCA TGCTTCTAGT TGGGAAAGAT
GGAAACGTCA AATCCTGGTA TCCTTCTCCA ATGTGGTCTA TGGCAATTGT GTATGATCTG
ATTGATTCCA TGCAGCTTCG GCGACAGGAA ATGACAATTC AGCAATCGCT CGGCATGCAA
TGCCCAGAAG ATGAGTATGG TGGGTATGGT TACCATAGCT ATCACCAGGG ATACCAGGAA
GGTTACCAGG ATGACTACCG CCACCATGGA AGTTACCACC ATGGATATCC ATACTGA |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
| RefSeq |
NP_989762.1 |
| CDS | 633..3509 |
| Translation | |
Target ORF information:
| RefSeq Version | NM_204431.1 |
| Organism | Gallus gallus(chicken) |
| Definition | Gallus gallus coiled-coil domain containing 80 (CCDC80), mRNA. |
Target ORF information:
| Epitope | DYKDDDDK |
| Bacterial selection | AMPR |
| Mammalian selection | NeoR |
| Vector | pcDNA3.1+/C-(K)DYK |
|
 NM_204431.1 |
ORF Insert Sequence:
1
61
121
181
241
301
361
421
481
541
601
661
721
781
841
901
961
1021
1081
1141
1201
1261
1321
1381
1441
1501
1561
1621
1681
1741
1801
1861
1921
1981
2041
2101
2161
2221
2281
2341
2401
2461
2521
2581
2641
2701
2761
2821
| ATGAACTGGA TGCCAGCTCT CAGCTTAGCC CTGCTGTGGA CAGCATGGCT AGTTTGTGGC
TCGGAGAAGA CAGGGAGGTT AGCAGAGAGA GGGAGCCATG GAGTTAGGAA AGTGCCTCAG
TCTCACAGGG CTCCAAGCAG CCTCCTGAGA AGGTCTGGAG CATCCCTAAA GAATCTGAGC
CCCAGTCCCC AACACCCGGT CACCAAGAGA GATTCTTCAG TACCTCCAAA GGCACCTGCC
AACCTCCTGA AAGAGGAATC ACGTTCCCAG CCCAGGAGCG TAGGCACCAG AACAAGGCGG
TTACAGAGAC TCACAGCTGC AGCCAAATAC TCCAAGTCTG AGATGATTAA GGATGAAGGG
ATATCTACCG CCTCACAGTC ACGAGCAGTA CGCTTCCCTT CAGGGTCAAG CTCCCCCAAT
GTCTTGGCCA GCTTTGCTGG GAAAAATCGG GTGTGGGTCA TTTCTGCCCC CCATGCCTCA
GAGGGCTACT ACCGGCTCAT GATGAGCCTG CTGAAAAATG ATGTTTACTG TGAACTGGCT
GAGAGACACA TCCAGCAGAT TGTGTTGTTC CATGAAGAAG GGGAAGAAGG AGGGAAAGTC
AGAAGGATAA CCAATGAAGG AAAAATCTTG GAACAGCCAC TGGATCCTGC TCTCATCCCT
AAGCTCATGA GCTTTCTGAA ACTAGAAAAG GGGAAATTTG GCATGGTGCT GCTGAAGAAA
ACTCTACAGG TGGAGGAAAG GTACCCTTAT CCCGTAAGGC TAGAGGCCAT GTATGAGGTC
ATTGATCAGA ACCCCATCAG AAAAATTGAG AAGATGAGAC AGAAGGGTTT CATACAGACT
TGCAAAGCAG CTGGGGTGGA GGGACAGGTG GTTGAAGATG ACAATAATGG GGGTAGCACC
CAATCTATCC CTGGTGGTGG ACATGTCCAA GTGTCAGCAG GAGGGAGGAA GGAGGAACCA
AGGAGGAGCA GCAACCAGCC AACAAGGACC AAAACAGTGA GAAAACCGAT GACAACCACT
GTGGCTACTC CTCTGCCTAC AGTAAGGACC ACTACCCTCC CTACCACCAC CACAGCCACC
CGGGCCACCA CCCGCACAGT GACAACAGCA AGCAGGCCTA CAACAACAAC TACACCCCTC
CCCACCACGC AGAGGACATG GACCACAAAG TCACATACCA CCACAGAGTA CCATAGGCTG
CCAGCATCTC CTGAGGTCAC CACACCGCGA GTCATGGCCT CTGAGGATTT CTATTCTCCT
GTGTGGAAGG CAAATCGCAG GGACCGGCAG CGAGGCCACC CAGAGAAACA CCTGGCAGCC
ACACGGAAAC CAAGCAAAGG TGGCCGCTAT GAGAGCTTCA CAGAAGTCCC AACAGCCCCC
TCAGTGCACT ACACAAAGGC AAGCATGAGT AGGTTTAAAG ATAATCGAAC AGACAGGAAG
GACTATAACC ACAGGGACCT GAATGTCACG CCAGGGCAAC ACAAACCGAC TAAGACTAAA
CCACCAAAAA AGAAGACACA AGAGAAGATA CTGAGTAATG AATATGAAGA TAAATATGAC
CCAAGTAAGC CTGCTAGTCC CCATTTAGAG GAAGAGATTG CAGTGGGAAG TATTCCCCCA
AAGAAAGGAA AAGAATCAAA GAAGCATGAG CGAATGGATA AACCTGAGAA GAAAAAGAAG
AAGGACAGAC CTGACAAGCT GCACAAGAGT GAGAAGCAGT CCAAGAAGGA CAAAGCTGAG
AAAAAGAGCA AGCAGGATAA AGACCGTAGC AAAAAAAACA AGAAGGGGAG CAGAACAGAG
AATGAGGATT TCCCCAAGCC CAACAAGAAG CCTTTCTTAC AGCCTCCCAG GAAATCGGTG
GCCAACCTCC TGGACTATTT TGAAGGCAAA AGGCGGCTCA TTCTGATTAC AACCCCCAAG
GCGGACAACA CCATGTATGT TCAGCAGCGA GACGAGTATC TGGAGAGCTT CTGCAAGATG
GCAACAAGGA AAATCTCAGT CATTACAATT TTTGGCACCA TGAACAACAG CAGCATGAAA
ATTGACCACT TCCAGCTAGA TAACGAAAAG CCCATGAAAG TGATAGAGGA TGAAGATCTT
GTGGATCAGC AGCTCATCAG TGAGCTGAGG AAAGAGTATG GGATGACCTA CAATGACTTC
TTCATGGTGC TGACGGACAC TGACATGAAG GTCAAGCAAT ACTATGAAGT ACCTATAGCA
ATGAAGTCTG TGTTTGATTT GATCGACACC TTCCAGTCAC GAATTAAAGA CATGGAAAGA
CAGAAAAAAG AGGGCATTGT CTGCAAAGAA GATAAAAAGC AATCCCTTGA GAGCTTCTTA
TCCAGGTTCC GATGGAGAAG GCGGCTAGTG GTGATCTCTG CTCCCAGTGA TGAGGACTGG
GCTTATTCCC AGCAGCTTGC TGCTCTCAGT GGACAAGCCT GTAATTTTGG TCTGCGCCAT
ATAACTATCC TCAAGTTGCT AGGAGTTGGA GAAGATATTG GTGGTGTCTT AGAGTTGTAT
CCAATTAATG GAAGTGCTAC TGTAGACCGA GAAGATATCC CAGCTAACTT GGTGAAAGAC
ATTCGAAATT ATTTCCAAAT TAGCCCAGAG TATTTCTCCA TGCTTCTAGT TGGGAAAGAT
GGAAACGTCA AATCCTGGTA TCCTTCTCCA ATGTGGTCTA TGGCAATTGT GTATGATCTG
ATTGATTCCA TGCAGCTTCG GCGACAGGAA ATGACAATTC AGCAATCGCT CGGCATGCAA
TGCCCAGAAG ATGAGTATGG TGGGTATGGT TACCATAGCT ATCACCAGGG ATACCAGGAA
GGTTACCAGG ATGACTACCG CCACCATGGA AGTTACCACC ATGGATATCC ATACTGA |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
