Gene Symbol |
CCDC80 |
Entrez Gene ID |
395074 |
Full Name |
coiled-coil domain containing 80 |
Synonyms |
cequarin,equarin-S |
General protein information |
- Preferred Names
coiled-coil domain containing 80
Names
coiled-coil domain-containing protein 80 coiled-coil domain-containing protein 80oiled-coil domain-containing protein 80 equarin equarin-L
|
Gene Type |
protein-coding |
Organism |
Gallus gallus(chicken) |
mRNA and Protein(s)
mRNA |
Protein |
Name |
NM_204431.1 |
NP_989762.1 |
coiled-coil domain-containing protein 80 precursor |
Homo sapiens (human) |
CCDC80 |
NP_955805.1 |
Mus musculus (house mouse) |
Ccdc80 |
NP_080715.2 |
Danio rerio (zebrafish) |
ccdc80 |
NP_001007199.1 |
Canis lupus familiaris (dog) |
CCDC80 |
XP_005639700.1 |
Rattus norvegicus (Norway rat) |
Ccdc80 |
NP_071988.2 |
Pan troglodytes (chimpanzee) |
CCDC80 |
XP_001156251.2 |
|
CCDC80 |
XP_002802691.1 |
Bos taurus (cattle) |
CCDC80 |
NP_001092452.1 |
Gallus gallus (chicken) |
CCDC80 |
NP_989762.1 |
Related articles in PubMed
Multiple roles of Equarin during lens development.
Song X, Tanaka H, Ohta K
Development, growth & differentiation56(3)199-205(2014 Apr)
Equarin is involved in cell adhesion by means of heparan sulfate proteoglycan during lens development.
Song X, Sato Y, Sekiguchi K, Tanaka H, Ohta K
Developmental dynamics : an official publication of the American Association of Anatomists242(1)23-9(2013 Jan)
Equarin is involved as an FGF signaling modulator in chick lens differentiation.
Song X, Sato Y, Felemban A, Ito A, Hossain M, Ochiai H, Yamamoto T, Sekiguchi K, Tanaka H, Ohta K
Developmental biology368(1)109-17(2012 Aug)
A balance of FGF and BMP signals regulates cell cycle exit and Equarin expression in lens cells.
Jarrin M, Pandit T, Gunhaga L
Molecular biology of the cell23(16)3266-74(2012 Aug)
Equarin, a novel soluble molecule expressed with polarity at chick embryonic lens equator, is involved in eye formation.
Mu H, Ohta K, Kuriyama S, Shimada N, Tanihara H, Yasuda K, Tanaka H
Mechanisms of development120(2)143-55(2003 Feb)
GeneRIFs: Gene References Into Functions What's a GeneRIF?
The following CCDC80 gene cDNA ORF clone sequences were retrieved from the NCBI Reference Sequence Database (RefSeq). These sequences represent the protein coding region of the CCDC80 cDNA ORF which is encoded by the open reading frame (ORF) sequence. ORF sequences can be delivered in our standard vector, pcDNA3.1+/C-(K)DYK or the vector of your choice as an expression/transfection-ready ORF clone. Not the clone you want? Click here to find your clone.
CloneID |
OGa27088 |
Clone ID Related Accession (Same CDS sequence) |
NM_204431.1
|
Accession Version |
NM_204431.1 Latest version! |
Documents for ORF clone product in default vector |
Sequence Information |
ORF Nucleotide Sequence (Length: 2877bp)
Protein sequence
SNP |
Vector |
pcDNA3.1+/C-(K)DYK or customized vector |
User Manual |
Clone information |
Clone Map |
MSDS |
Tag on pcDNA3.1+/C-(K)DYK |
C terminal DYKDDDDK tags |
ORF Insert Method |
CloneEZ™ Seamless cloning technology |
Insert Structure |
linear |
Update Date |
2019-12-25 |
Organism |
Gallus gallus(chicken) |
Product |
coiled-coil domain-containing protein 80 precursor |
Comment |
Comment: PROVISIONAL REFSEQ: This record has not yet been subject to final NCBI review. The reference sequence was derived from AB086824.1.
##Evidence-Data-START##
Transcript exon combination :: AB086824.1 [ECO:0000332]
##Evidence-Data-END##
|
1 61 121 181 241 301 361 421 481 541 601 661 721 781 841 901 961 1021 1081 1141 1201 1261 1321 1381 1441 1501 1561 1621 1681 1741 1801 1861 1921 1981 2041 2101 2161 2221 2281 2341 2401 2461 2521 2581 2641 2701 2761 2821
| ATGAACTGGA TGCCAGCTCT CAGCTTAGCC CTGCTGTGGA CAGCATGGCT AGTTTGTGGC TCGGAGAAGA CAGGGAGGTT AGCAGAGAGA GGGAGCCATG GAGTTAGGAA AGTGCCTCAG TCTCACAGGG CTCCAAGCAG CCTCCTGAGA AGGTCTGGAG CATCCCTAAA GAATCTGAGC CCCAGTCCCC AACACCCGGT CACCAAGAGA GATTCTTCAG TACCTCCAAA GGCACCTGCC AACCTCCTGA AAGAGGAATC ACGTTCCCAG CCCAGGAGCG TAGGCACCAG AACAAGGCGG TTACAGAGAC TCACAGCTGC AGCCAAATAC TCCAAGTCTG AGATGATTAA GGATGAAGGG ATATCTACCG CCTCACAGTC ACGAGCAGTA CGCTTCCCTT CAGGGTCAAG CTCCCCCAAT GTCTTGGCCA GCTTTGCTGG GAAAAATCGG GTGTGGGTCA TTTCTGCCCC CCATGCCTCA GAGGGCTACT ACCGGCTCAT GATGAGCCTG CTGAAAAATG ATGTTTACTG TGAACTGGCT GAGAGACACA TCCAGCAGAT TGTGTTGTTC CATGAAGAAG GGGAAGAAGG AGGGAAAGTC AGAAGGATAA CCAATGAAGG AAAAATCTTG GAACAGCCAC TGGATCCTGC TCTCATCCCT AAGCTCATGA GCTTTCTGAA ACTAGAAAAG GGGAAATTTG GCATGGTGCT GCTGAAGAAA ACTCTACAGG TGGAGGAAAG GTACCCTTAT CCCGTAAGGC TAGAGGCCAT GTATGAGGTC ATTGATCAGA ACCCCATCAG AAAAATTGAG AAGATGAGAC AGAAGGGTTT CATACAGACT TGCAAAGCAG CTGGGGTGGA GGGACAGGTG GTTGAAGATG ACAATAATGG GGGTAGCACC CAATCTATCC CTGGTGGTGG ACATGTCCAA GTGTCAGCAG GAGGGAGGAA GGAGGAACCA AGGAGGAGCA GCAACCAGCC AACAAGGACC AAAACAGTGA GAAAACCGAT GACAACCACT GTGGCTACTC CTCTGCCTAC AGTAAGGACC ACTACCCTCC CTACCACCAC CACAGCCACC CGGGCCACCA CCCGCACAGT GACAACAGCA AGCAGGCCTA CAACAACAAC TACACCCCTC CCCACCACGC AGAGGACATG GACCACAAAG TCACATACCA CCACAGAGTA CCATAGGCTG CCAGCATCTC CTGAGGTCAC CACACCGCGA GTCATGGCCT CTGAGGATTT CTATTCTCCT GTGTGGAAGG CAAATCGCAG GGACCGGCAG CGAGGCCACC CAGAGAAACA CCTGGCAGCC ACACGGAAAC CAAGCAAAGG TGGCCGCTAT GAGAGCTTCA CAGAAGTCCC AACAGCCCCC TCAGTGCACT ACACAAAGGC AAGCATGAGT AGGTTTAAAG ATAATCGAAC AGACAGGAAG GACTATAACC ACAGGGACCT GAATGTCACG CCAGGGCAAC ACAAACCGAC TAAGACTAAA CCACCAAAAA AGAAGACACA AGAGAAGATA CTGAGTAATG AATATGAAGA TAAATATGAC CCAAGTAAGC CTGCTAGTCC CCATTTAGAG GAAGAGATTG CAGTGGGAAG TATTCCCCCA AAGAAAGGAA AAGAATCAAA GAAGCATGAG CGAATGGATA AACCTGAGAA GAAAAAGAAG AAGGACAGAC CTGACAAGCT GCACAAGAGT GAGAAGCAGT CCAAGAAGGA CAAAGCTGAG AAAAAGAGCA AGCAGGATAA AGACCGTAGC AAAAAAAACA AGAAGGGGAG CAGAACAGAG AATGAGGATT TCCCCAAGCC CAACAAGAAG CCTTTCTTAC AGCCTCCCAG GAAATCGGTG GCCAACCTCC TGGACTATTT TGAAGGCAAA AGGCGGCTCA TTCTGATTAC AACCCCCAAG GCGGACAACA CCATGTATGT TCAGCAGCGA GACGAGTATC TGGAGAGCTT CTGCAAGATG GCAACAAGGA AAATCTCAGT CATTACAATT TTTGGCACCA TGAACAACAG CAGCATGAAA ATTGACCACT TCCAGCTAGA TAACGAAAAG CCCATGAAAG TGATAGAGGA TGAAGATCTT GTGGATCAGC AGCTCATCAG TGAGCTGAGG AAAGAGTATG GGATGACCTA CAATGACTTC TTCATGGTGC TGACGGACAC TGACATGAAG GTCAAGCAAT ACTATGAAGT ACCTATAGCA ATGAAGTCTG TGTTTGATTT GATCGACACC TTCCAGTCAC GAATTAAAGA CATGGAAAGA CAGAAAAAAG AGGGCATTGT CTGCAAAGAA GATAAAAAGC AATCCCTTGA GAGCTTCTTA TCCAGGTTCC GATGGAGAAG GCGGCTAGTG GTGATCTCTG CTCCCAGTGA TGAGGACTGG GCTTATTCCC AGCAGCTTGC TGCTCTCAGT GGACAAGCCT GTAATTTTGG TCTGCGCCAT ATAACTATCC TCAAGTTGCT AGGAGTTGGA GAAGATATTG GTGGTGTCTT AGAGTTGTAT CCAATTAATG GAAGTGCTAC TGTAGACCGA GAAGATATCC CAGCTAACTT GGTGAAAGAC ATTCGAAATT ATTTCCAAAT TAGCCCAGAG TATTTCTCCA TGCTTCTAGT TGGGAAAGAT GGAAACGTCA AATCCTGGTA TCCTTCTCCA ATGTGGTCTA TGGCAATTGT GTATGATCTG ATTGATTCCA TGCAGCTTCG GCGACAGGAA ATGACAATTC AGCAATCGCT CGGCATGCAA TGCCCAGAAG ATGAGTATGG TGGGTATGGT TACCATAGCT ATCACCAGGG ATACCAGGAA GGTTACCAGG ATGACTACCG CCACCATGGA AGTTACCACC ATGGATATCC ATACTGA |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
RefSeq |
NP_989762.1 |
CDS | 633..3509 |
Translation | |
Target ORF information:
RefSeq Version | NM_204431.1 |
Organism | Gallus gallus(chicken) |
Definition | Gallus gallus coiled-coil domain containing 80 (CCDC80), mRNA. |
Target ORF information:
Epitope | DYKDDDDK |
Bacterial selection | AMPR |
Mammalian selection | NeoR |
Vector | pcDNA3.1+/C-(K)DYK |
|
NM_204431.1 |
ORF Insert Sequence:
1 61 121 181 241 301 361 421 481 541 601 661 721 781 841 901 961 1021 1081 1141 1201 1261 1321 1381 1441 1501 1561 1621 1681 1741 1801 1861 1921 1981 2041 2101 2161 2221 2281 2341 2401 2461 2521 2581 2641 2701 2761 2821
| ATGAACTGGA TGCCAGCTCT CAGCTTAGCC CTGCTGTGGA CAGCATGGCT AGTTTGTGGC TCGGAGAAGA CAGGGAGGTT AGCAGAGAGA GGGAGCCATG GAGTTAGGAA AGTGCCTCAG TCTCACAGGG CTCCAAGCAG CCTCCTGAGA AGGTCTGGAG CATCCCTAAA GAATCTGAGC CCCAGTCCCC AACACCCGGT CACCAAGAGA GATTCTTCAG TACCTCCAAA GGCACCTGCC AACCTCCTGA AAGAGGAATC ACGTTCCCAG CCCAGGAGCG TAGGCACCAG AACAAGGCGG TTACAGAGAC TCACAGCTGC AGCCAAATAC TCCAAGTCTG AGATGATTAA GGATGAAGGG ATATCTACCG CCTCACAGTC ACGAGCAGTA CGCTTCCCTT CAGGGTCAAG CTCCCCCAAT GTCTTGGCCA GCTTTGCTGG GAAAAATCGG GTGTGGGTCA TTTCTGCCCC CCATGCCTCA GAGGGCTACT ACCGGCTCAT GATGAGCCTG CTGAAAAATG ATGTTTACTG TGAACTGGCT GAGAGACACA TCCAGCAGAT TGTGTTGTTC CATGAAGAAG GGGAAGAAGG AGGGAAAGTC AGAAGGATAA CCAATGAAGG AAAAATCTTG GAACAGCCAC TGGATCCTGC TCTCATCCCT AAGCTCATGA GCTTTCTGAA ACTAGAAAAG GGGAAATTTG GCATGGTGCT GCTGAAGAAA ACTCTACAGG TGGAGGAAAG GTACCCTTAT CCCGTAAGGC TAGAGGCCAT GTATGAGGTC ATTGATCAGA ACCCCATCAG AAAAATTGAG AAGATGAGAC AGAAGGGTTT CATACAGACT TGCAAAGCAG CTGGGGTGGA GGGACAGGTG GTTGAAGATG ACAATAATGG GGGTAGCACC CAATCTATCC CTGGTGGTGG ACATGTCCAA GTGTCAGCAG GAGGGAGGAA GGAGGAACCA AGGAGGAGCA GCAACCAGCC AACAAGGACC AAAACAGTGA GAAAACCGAT GACAACCACT GTGGCTACTC CTCTGCCTAC AGTAAGGACC ACTACCCTCC CTACCACCAC CACAGCCACC CGGGCCACCA CCCGCACAGT GACAACAGCA AGCAGGCCTA CAACAACAAC TACACCCCTC CCCACCACGC AGAGGACATG GACCACAAAG TCACATACCA CCACAGAGTA CCATAGGCTG CCAGCATCTC CTGAGGTCAC CACACCGCGA GTCATGGCCT CTGAGGATTT CTATTCTCCT GTGTGGAAGG CAAATCGCAG GGACCGGCAG CGAGGCCACC CAGAGAAACA CCTGGCAGCC ACACGGAAAC CAAGCAAAGG TGGCCGCTAT GAGAGCTTCA CAGAAGTCCC AACAGCCCCC TCAGTGCACT ACACAAAGGC AAGCATGAGT AGGTTTAAAG ATAATCGAAC AGACAGGAAG GACTATAACC ACAGGGACCT GAATGTCACG CCAGGGCAAC ACAAACCGAC TAAGACTAAA CCACCAAAAA AGAAGACACA AGAGAAGATA CTGAGTAATG AATATGAAGA TAAATATGAC CCAAGTAAGC CTGCTAGTCC CCATTTAGAG GAAGAGATTG CAGTGGGAAG TATTCCCCCA AAGAAAGGAA AAGAATCAAA GAAGCATGAG CGAATGGATA AACCTGAGAA GAAAAAGAAG AAGGACAGAC CTGACAAGCT GCACAAGAGT GAGAAGCAGT CCAAGAAGGA CAAAGCTGAG AAAAAGAGCA AGCAGGATAA AGACCGTAGC AAAAAAAACA AGAAGGGGAG CAGAACAGAG AATGAGGATT TCCCCAAGCC CAACAAGAAG CCTTTCTTAC AGCCTCCCAG GAAATCGGTG GCCAACCTCC TGGACTATTT TGAAGGCAAA AGGCGGCTCA TTCTGATTAC AACCCCCAAG GCGGACAACA CCATGTATGT TCAGCAGCGA GACGAGTATC TGGAGAGCTT CTGCAAGATG GCAACAAGGA AAATCTCAGT CATTACAATT TTTGGCACCA TGAACAACAG CAGCATGAAA ATTGACCACT TCCAGCTAGA TAACGAAAAG CCCATGAAAG TGATAGAGGA TGAAGATCTT GTGGATCAGC AGCTCATCAG TGAGCTGAGG AAAGAGTATG GGATGACCTA CAATGACTTC TTCATGGTGC TGACGGACAC TGACATGAAG GTCAAGCAAT ACTATGAAGT ACCTATAGCA ATGAAGTCTG TGTTTGATTT GATCGACACC TTCCAGTCAC GAATTAAAGA CATGGAAAGA CAGAAAAAAG AGGGCATTGT CTGCAAAGAA GATAAAAAGC AATCCCTTGA GAGCTTCTTA TCCAGGTTCC GATGGAGAAG GCGGCTAGTG GTGATCTCTG CTCCCAGTGA TGAGGACTGG GCTTATTCCC AGCAGCTTGC TGCTCTCAGT GGACAAGCCT GTAATTTTGG TCTGCGCCAT ATAACTATCC TCAAGTTGCT AGGAGTTGGA GAAGATATTG GTGGTGTCTT AGAGTTGTAT CCAATTAATG GAAGTGCTAC TGTAGACCGA GAAGATATCC CAGCTAACTT GGTGAAAGAC ATTCGAAATT ATTTCCAAAT TAGCCCAGAG TATTTCTCCA TGCTTCTAGT TGGGAAAGAT GGAAACGTCA AATCCTGGTA TCCTTCTCCA ATGTGGTCTA TGGCAATTGT GTATGATCTG ATTGATTCCA TGCAGCTTCG GCGACAGGAA ATGACAATTC AGCAATCGCT CGGCATGCAA TGCCCAGAAG ATGAGTATGG TGGGTATGGT TACCATAGCT ATCACCAGGG ATACCAGGAA GGTTACCAGG ATGACTACCG CCACCATGGA AGTTACCACC ATGGATATCC ATACTGA |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.