Gene Symbol | PDS5B |
Entrez Gene ID | 418910 |
Full Name | PDS5 cohesin associated factor B |
Synonyms | APRIN |
General protein information |
|
Gene Type | protein-coding |
Organism | Gallus gallus(chicken) |
ORF » Species Summary » Gallus gallus » PDS5B cDNA ORF clone
Gene Symbol | PDS5B |
Entrez Gene ID | 418910 |
Full Name | PDS5 cohesin associated factor B |
Synonyms | APRIN |
General protein information |
|
Gene Type | protein-coding |
Organism | Gallus gallus(chicken) |
mRNA | Protein | Name |
---|---|---|
XM_015277841.1 | XP_015133327.1 | sister chromatid cohesion protein PDS5 homolog B isoform X1 |
XM_015277851.1 | XP_015133337.1 | sister chromatid cohesion protein PDS5 homolog B isoform X1 |
NM_001012827.2 | NP_001012845.2 | sister chromatid cohesion protein PDS5 homolog B |
XM_015277851.2 | XP_015133337.1 | sister chromatid cohesion protein PDS5 homolog B isoform X1 |
XM_015277867.1 | XP_015133353.1 | sister chromatid cohesion protein PDS5 homolog B isoform X2 |
XM_015277859.1 | XP_015133345.1 | sister chromatid cohesion protein PDS5 homolog B isoform X1 |
XM_015277870.1 | XP_015133356.1 | sister chromatid cohesion protein PDS5 homolog B isoform X3 |
PDS5B | XP_001118201.2 | |
Bos taurus (cattle) | PDS5B | XP_002691801.2 |
Caenorhabditis elegans (roundworm) | evl-14 | NP_497865.2 |
Saccharomyces cerevisiae (baker's yeast) | PDS5 | NP_013793.1 |
Kluyveromyces lactis | KLLA0F25806g | XP_456229.1 |
Schizosaccharomyces pombe (fission yeast) | pds5 | NP_593535.1 |
Neurospora crassa | NCU00424 | XP_956688.2 |
Magnaporthe oryzae (rice blast fungus) | MGG_06465 | XP_003717099.1 |
Homo sapiens (human) | PDS5B | NP_055847.1 |
Danio rerio (zebrafish) | pds5b | XP_693953.2 |
Drosophila melanogaster (fruit fly) | pds5 | NP_001246271.1 |
Canis lupus familiaris (dog) | PDS5B | XP_543139.3 |
Anopheles gambiae (African malaria mosquito) | AgaP_AGAP010643 | XP_311361.4 |
Eremothecium gossypii | AGOS_AGL076W | NP_986590.1 |
Xenopus tropicalis (tropical clawed frog) | pds5b | NP_001107500.1 |
Pan troglodytes (chimpanzee) | PDS5B | XP_003314158.2 |
Mus musculus (house mouse) | Pds5b | NP_780519.3 |
Rattus norvegicus (Norway rat) | Pds5b | NP_001095853.1 |
Gallus gallus (chicken) | PDS5B | NP_001012845.2 |
Chicken genomics resource: sequencing and annotation of 35,407 ESTs from single and multiple tissue cDNA libraries and CAP3 assembly of a chicken gene index.
Carre W, Wang X, Porter TE, Nys Y, Tang J, Bernberg E, Morgan R, Burnside J, Aggrey SE, Simon J, Cogburn LA
Physiological genomics25(3)514-24(2006 May)
Full-length cDNAs from chicken bursal lymphocytes to facilitate gene function analysis.
Caldwell RB, Kierzek AM, Arakawa H, Bezzubov Y, Zaim J, Fiedler P, Kutter S, Blagodatski A, Kostovska D, Koter M, Plachy J, Carninci P, Hayashizaki Y, Buerstedde JM
Genome biology6(1)R6(2005)
A comprehensive collection of chicken cDNAs.
Boardman PE, Sanz-Ezquerro J, Overton IM, Burt DW, Bosch E, Fong WT, Tickle C, Brown WR, Wilson SA, Hubbard SJ
Current biology : CB12(22)1965-9(2002 Nov)
GeneRIFs: Gene References Into Functions What's a GeneRIF?
The following PDS5B gene cDNA ORF clone sequences were retrieved from the NCBI Reference Sequence Database (RefSeq). These sequences represent the protein coding region of the PDS5B cDNA ORF which is encoded by the open reading frame (ORF) sequence. ORF sequences can be delivered in our standard vector, pcDNA3.1+/C-(K)DYK or the vector of your choice as an expression/transfection-ready ORF clone. Not the clone you want? Click here to find your clone.
CloneID | OGa30964 | |
Clone ID Related Accession (Same CDS sequence) | XM_015277841.1 , XM_015277851.1 , XM_015277851.2 , XM_015277859.1 | |
Accession Version | XM_015277841.1 Latest version! | Documents for ORF clone product in default vector |
Sequence Information | ORF Nucleotide Sequence (Length: 4347bp) Protein sequence SNP |
|
Vector | pcDNA3.1-C-(k)DYK or customized vector | User Manual |
Clone information | Clone Map | MSDS |
Tag on pcDNA3.1+/C-(K)DYK | C terminal DYKDDDDK tags | |
ORF Insert Method | CloneEZ™ Seamless cloning technology | |
Insert Structure | linear | |
Update Date | 2018-05-16 | |
Organism | Gallus gallus(chicken) | |
Product | sister chromatid cohesion protein PDS5 homolog B isoform X1 | |
Comment | Comment: MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NC_006088.5) annotated using gene prediction method: Gnomon, supported by mRNA and EST evidence. Also see: Documentation of NCBI's Annotation Process ##Genome-Annotation-Data-START## Annotation Provider :: NCBI Annotation Status :: Full annotation Annotation Name :: Gallus gallus Annotation Release 104 Annotation Version :: 104 Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline Annotation Software Version :: 8.0 Annotation Method :: Best-placed RefSeq; Gnomon Features Annotated :: Gene; mRNA; CDS; ncRNA ##Genome-Annotation-Data-END## |
1 | ATGGCTCATT CAAAGACGAG AGCCAATGAT GGAAAAATCA CATATCCTCC AGGAGTCAAA |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
RefSeq | XP_015133327.1 |
CDS | 175..4521 |
Translation |
Target ORF information:
Target ORF information:
|
XM_015277841.1 |
1 | ATGGCTCATT CAAAGACGAG AGCCAATGAT GGAAAAATCA CATATCCTCC AGGAGTCAAA |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
CloneID | OGa30964 | |
Clone ID Related Accession (Same CDS sequence) | XM_015277841.1 , XM_015277851.1 , XM_015277851.2 , XM_015277859.1 | |
Accession Version | XM_015277851.1 | Documents for ORF clone product in default vector |
Sequence Information | ORF Nucleotide Sequence (Length: 4347bp) Protein sequence SNP |
|
Vector | pcDNA3.1-C-(k)DYK or customized vector | User Manual |
Clone information | Clone Map | MSDS |
Tag on pcDNA3.1+/C-(K)DYK | C terminal DYKDDDDK tags | |
ORF Insert Method | CloneEZ™ Seamless cloning technology | |
Insert Structure | linear | |
Update Date | 2016-01-03 | |
Organism | Gallus gallus(chicken) | |
Product | sister chromatid cohesion protein PDS5 homolog B isoform X1 | |
Comment | Comment: MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NT_455760.1) annotated using gene prediction method: Gnomon, supported by mRNA and EST evidence. Also see: Documentation of NCBI's Annotation Process ##Genome-Annotation-Data-START## Annotation Provider :: NCBI Annotation Status :: Full annotation Annotation Version :: Gallus gallus Annotation Release 103 Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline Annotation Software Version :: 6.5 Annotation Method :: Best-placed RefSeq; Gnomon Features Annotated :: Gene; mRNA; CDS; ncRNA ##Genome-Annotation-Data-END## |
1 | ATGGCTCATT CAAAGACGAG AGCCAATGAT GGAAAAATCA CATATCCTCC AGGAGTCAAA |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
RefSeq | XP_015133337.1 |
CDS | 39..4385 |
Translation |
Target ORF information:
Target ORF information:
|
XM_015277851.1 |
1 | ATGGCTCATT CAAAGACGAG AGCCAATGAT GGAAAAATCA CATATCCTCC AGGAGTCAAA |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
CloneID | OGa30964 | |
Clone ID Related Accession (Same CDS sequence) | XM_015277841.1 , XM_015277851.1 , XM_015277851.2 , XM_015277859.1 | |
Accession Version | XM_015277851.2 Latest version! | Documents for ORF clone product in default vector |
Sequence Information | ORF Nucleotide Sequence (Length: 4347bp) Protein sequence SNP |
|
Vector | pcDNA3.1-C-(k)DYK or customized vector | User Manual |
Clone information | Clone Map | MSDS |
Tag on pcDNA3.1+/C-(K)DYK | C terminal DYKDDDDK tags | |
ORF Insert Method | CloneEZ™ Seamless cloning technology | |
Insert Structure | linear | |
Update Date | 2018-05-16 | |
Organism | Gallus gallus(chicken) | |
Product | sister chromatid cohesion protein PDS5 homolog B isoform X1 | |
Comment | Comment: MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NC_006088.5) annotated using gene prediction method: Gnomon, supported by mRNA and EST evidence. Also see: Documentation of NCBI's Annotation Process On May 17, 2018 this sequence version replaced XM_015277851.1. ##Genome-Annotation-Data-START## Annotation Provider :: NCBI Annotation Status :: Full annotation Annotation Name :: Gallus gallus Annotation Release 104 Annotation Version :: 104 Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline Annotation Software Version :: 8.0 Annotation Method :: Best-placed RefSeq; Gnomon Features Annotated :: Gene; mRNA; CDS; ncRNA ##Genome-Annotation-Data-END## |
1 | ATGGCTCATT CAAAGACGAG AGCCAATGAT GGAAAAATCA CATATCCTCC AGGAGTCAAA |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
RefSeq | XP_015133337.1 |
CDS | 139..4485 |
Translation |
Target ORF information:
Target ORF information:
|
XM_015277851.2 |
1 | ATGGCTCATT CAAAGACGAG AGCCAATGAT GGAAAAATCA CATATCCTCC AGGAGTCAAA |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
CloneID | OGa30964 | |
Clone ID Related Accession (Same CDS sequence) | XM_015277841.1 , XM_015277851.1 , XM_015277851.2 , XM_015277859.1 | |
Accession Version | XM_015277859.1 Latest version! | Documents for ORF clone product in default vector |
Sequence Information | ORF Nucleotide Sequence (Length: 4347bp) Protein sequence SNP |
|
Vector | pcDNA3.1-C-(k)DYK or customized vector | User Manual |
Clone information | Clone Map | MSDS |
Tag on pcDNA3.1+/C-(K)DYK | C terminal DYKDDDDK tags | |
ORF Insert Method | CloneEZ™ Seamless cloning technology | |
Insert Structure | linear | |
Update Date | 2016-01-03 | |
Organism | Gallus gallus(chicken) | |
Product | sister chromatid cohesion protein PDS5 homolog B isoform X1 | |
Comment | Comment: MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NT_455760.1) annotated using gene prediction method: Gnomon, supported by mRNA and EST evidence. Also see: Documentation of NCBI's Annotation Process ##Genome-Annotation-Data-START## Annotation Provider :: NCBI Annotation Status :: Full annotation Annotation Version :: Gallus gallus Annotation Release 103 Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline Annotation Software Version :: 6.5 Annotation Method :: Best-placed RefSeq; Gnomon Features Annotated :: Gene; mRNA; CDS; ncRNA ##Genome-Annotation-Data-END## |
1 | ATGGCTCATT CAAAGACGAG AGCCAATGAT GGAAAAATCA CATATCCTCC AGGAGTCAAA |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
RefSeq | XP_015133345.1 |
CDS | 175..4521 |
Translation |
Target ORF information:
Target ORF information:
|
XM_015277859.1 |
1 | ATGGCTCATT CAAAGACGAG AGCCAATGAT GGAAAAATCA CATATCCTCC AGGAGTCAAA |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
CloneID | OGa30965 | |
Clone ID Related Accession (Same CDS sequence) | XM_015277867.1 | |
Accession Version | XM_015277867.1 Latest version! | Documents for ORF clone product in default vector |
Sequence Information | ORF Nucleotide Sequence (Length: 4245bp) Protein sequence SNP |
|
Vector | pcDNA3.1-C-(k)DYK or customized vector | User Manual |
Clone information | Clone Map | MSDS |
Tag on pcDNA3.1+/C-(K)DYK | C terminal DYKDDDDK tags | |
ORF Insert Method | CloneEZ™ Seamless cloning technology | |
Insert Structure | linear | |
Update Date | 2018-05-16 | |
Organism | Gallus gallus(chicken) | |
Product | sister chromatid cohesion protein PDS5 homolog B isoform X2 | |
Comment | Comment: MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NC_006088.5) annotated using gene prediction method: Gnomon, supported by mRNA and EST evidence. Also see: Documentation of NCBI's Annotation Process ##Genome-Annotation-Data-START## Annotation Provider :: NCBI Annotation Status :: Full annotation Annotation Name :: Gallus gallus Annotation Release 104 Annotation Version :: 104 Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline Annotation Software Version :: 8.0 Annotation Method :: Best-placed RefSeq; Gnomon Features Annotated :: Gene; mRNA; CDS; ncRNA ##Genome-Annotation-Data-END## |
1 | ATGGCTCATT CAAAGACGAG AGCCAATGAT GGAAAAATCA CATATCCTCC AGGAGTCAAA |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
RefSeq | XP_015133353.1 |
CDS | 175..4419 |
Translation |
Target ORF information:
Target ORF information:
|
XM_015277867.1 |
1 | ATGGCTCATT CAAAGACGAG AGCCAATGAT GGAAAAATCA CATATCCTCC AGGAGTCAAA |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
CloneID | OGa30966 | |
Clone ID Related Accession (Same CDS sequence) | XM_015277870.1 | |
Accession Version | XM_015277870.1 Latest version! | Documents for ORF clone product in default vector |
Sequence Information | ORF Nucleotide Sequence (Length: 4239bp) Protein sequence SNP |
|
Vector | pcDNA3.1-C-(k)DYK or customized vector | User Manual |
Clone information | Clone Map | MSDS |
Tag on pcDNA3.1+/C-(K)DYK | C terminal DYKDDDDK tags | |
ORF Insert Method | CloneEZ™ Seamless cloning technology | |
Insert Structure | linear | |
Update Date | 2018-05-16 | |
Organism | Gallus gallus(chicken) | |
Product | sister chromatid cohesion protein PDS5 homolog B isoform X3 | |
Comment | Comment: MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NC_006088.5) annotated using gene prediction method: Gnomon, supported by mRNA and EST evidence. Also see: Documentation of NCBI's Annotation Process ##Genome-Annotation-Data-START## Annotation Provider :: NCBI Annotation Status :: Full annotation Annotation Name :: Gallus gallus Annotation Release 104 Annotation Version :: 104 Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline Annotation Software Version :: 8.0 Annotation Method :: Best-placed RefSeq; Gnomon Features Annotated :: Gene; mRNA; CDS; ncRNA ##Genome-Annotation-Data-END## |
1 | ATGGCTCATT CAAAGACGAG AGCCAATGAT GGAAAAATCA CATATCCTCC AGGAGTCAAA |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
RefSeq | XP_015133356.1 |
CDS | 175..4413 |
Translation |
Target ORF information:
Target ORF information:
|
XM_015277870.1 |
1 | ATGGCTCATT CAAAGACGAG AGCCAATGAT GGAAAAATCA CATATCCTCC AGGAGTCAAA |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
CloneID | OGa28139 | |
Clone ID Related Accession (Same CDS sequence) | NM_001012827.2 | |
Accession Version | NM_001012827.2 Latest version! | Documents for ORF clone product in default vector |
Sequence Information | ORF Nucleotide Sequence (Length: 4341bp) Protein sequence SNP |
|
Vector | pcDNA3.1-C-(k)DYK or customized vector | User Manual |
Clone information | Clone Map | MSDS |
Tag on pcDNA3.1+/C-(K)DYK | C terminal DYKDDDDK tags | |
ORF Insert Method | CloneEZ™ Seamless cloning technology | |
Insert Structure | linear | |
Update Date | 2019-10-19 | |
Organism | Gallus gallus(chicken) | |
Product | sister chromatid cohesion protein PDS5 homolog B | |
Comment | Comment: VALIDATED REFSEQ: This record has undergone validation or preliminary review. The reference sequence was derived from AC147444.4, AJ452847.1, AJ733629.1, AJ733630.1, BG625340.1, BU482899.1, BU363024.1, AJ733634.1, CR385478.1 and CR388849.1. On Oct 19, 2007 this sequence version replaced NM_001012827.1. Sequence Note: This RefSeq record was created from transcript and genomic sequence data because no single transcript from the same strain was available for the full length of the gene. The extent of this transcript is supported by transcript alignments and orthologous data. COMPLETENESS: complete on the 3' end. |
1 | ATGGCTCATT CAAAGACGAG AGCCAATGAT GGAAAAATCA CATATCCTCC AGGAGTCAAA |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
RefSeq | NP_001012845.2 |
CDS | 180..4520 |
Translation |
Target ORF information:
Target ORF information:
|
NM_001012827.2 |
1 | ATGGCTCATT CAAAGACGAG AGCCAATGAT GGAAAAATCA CATATCCTCC AGGAGTCAAA |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
Chicken genomics resource: sequencing and annotation of 35,407 ESTs from single and multiple tissue cDNA libraries and CAP3 assembly of a chicken gene index. |
Full-length cDNAs from chicken bursal lymphocytes to facilitate gene function analysis. |
A comprehensive collection of chicken cDNAs. |