Gene Symbol | ODC1 |
Entrez Gene ID | 421937 |
Full Name | ornithine decarboxylase 1 |
Synonyms | ODC |
General protein information |
|
Gene Type | protein-coding |
Organism | Gallus gallus(chicken) |
ORF » Species Summary » Gallus gallus » ODC1 cDNA ORF clone
Gene Symbol | ODC1 |
Entrez Gene ID | 421937 |
Full Name | ornithine decarboxylase 1 |
Synonyms | ODC |
General protein information |
|
Gene Type | protein-coding |
Organism | Gallus gallus(chicken) |
mRNA | Protein | Name |
---|---|---|
XM_015276042.1 | XP_015131528.1 | ornithine decarboxylase isoform X1 |
XM_015276041.2 | XP_015131527.1 | ornithine decarboxylase isoform X1 |
NM_001167766.1 | NP_001161238.1 | ornithine decarboxylase |
XM_015276041.1 | XP_015131527.1 | ornithine decarboxylase isoform X1 |
Canis lupus familiaris (dog) | ODC1 | XP_856711.1 |
Rattus norvegicus (Norway rat) | Odc1 | NP_036747.1 |
Caenorhabditis elegans (roundworm) | odc-1 | NP_504752.1 |
Schizosaccharomyces pombe (fission yeast) | spe1 | NP_594665.1 |
Oryza sativa (rice) | Os04g0136500 | NP_001052100.2 |
Gallus gallus (chicken) | ODC1 | NP_001161238.1 |
Drosophila melanogaster (fruit fly) | Odc2 | NP_477053.2 |
Magnaporthe oryzae (rice blast fungus) | MGG_02441 | XP_003709230.1 |
Xenopus tropicalis (tropical clawed frog) | odc1 | NP_001005441.1 |
Homo sapiens (human) | ODC1 | NP_002530.1 |
Pan troglodytes (chimpanzee) | ODC1 | XP_001157520.1 |
LOC694559 | XP_001084503.1 | |
Drosophila melanogaster (fruit fly) | Odc1 | NP_477052.2 |
Anopheles gambiae (African malaria mosquito) | AgaP_AGAP011805 | XP_320710.4 |
Kluyveromyces lactis | KLLA0B02673g | XP_451651.1 |
Eremothecium gossypii | AGOS_AER087C | NP_984947.2 |
Oryza sativa (rice) | Os09g0543400 | NP_001063827.2 |
Bos taurus (cattle) | ODC1 | NP_776555.1 |
Mus musculus (house mouse) | Odc1 | NP_038642.2 |
Saccharomyces cerevisiae (baker's yeast) | SPE1 | NP_012737.1 |
Neurospora crassa | NCU01271 | XP_960749.1 |
Danio rerio (zebrafish) | odc1 | NP_571876.1 |
Ornithine decarboxylase gene is a positional candidate gene affecting growth and carcass traits in F? intercross chickens.
Uemoto Y, Sato S, Ohtake T, Sato S, Okumura Y, Kobayashi E
Poultry science90(1)35-41(2011 Jan)
A large database of chicken bursal ESTs as a resource for the analysis of vertebrate gene function.
Abdrakhmanov I, Lodygin D, Geroth P, Arakawa H, Law A, Plachy J, Korn B, Buerstedde JM
Genome research10(12)2062-9(2000 Dec)
Molecular cloning and sequence analysis of a chicken ornithine decarboxylase cDNA.
Johnson R, Bulfield G
Animal genetics23(5)403-9(1992)
GeneRIFs: Gene References Into Functions What's a GeneRIF?
The role of ornithine decarboxylase genotype in growth and body composition traits in chickens is reported.
Title: Ornithine decarboxylase gene is a positional candidate gene affecting growth and carcass traits in F? intercross chickens.
The following ODC1 gene cDNA ORF clone sequences were retrieved from the NCBI Reference Sequence Database (RefSeq). These sequences represent the protein coding region of the ODC1 cDNA ORF which is encoded by the open reading frame (ORF) sequence. ORF sequences can be delivered in our standard vector, pcDNA3.1+/C-(K)DYK or the vector of your choice as an expression/transfection-ready ORF clone. Not the clone you want? Click here to find your clone.
CloneID | OGa00136 | |
Clone ID Related Accession (Same CDS sequence) | XM_015276042.1 , XM_015276041.2 , NM_001167766.1 , XM_015276041.1 | |
Accession Version | NM_001167766.1 Latest version! | Documents for ORF clone product in default vector |
Sequence Information | ORF Nucleotide Sequence (Length: 1395bp) Protein sequence SNP |
|
Vector | pcDNA3.1-C-(k)DYK or customized vector | User Manual |
Clone information | Clone Map | MSDS |
Tag on pcDNA3.1+/C-(K)DYK | C terminal DYKDDDDK tags | |
ORF Insert Method | CloneEZ™ Seamless cloning technology | |
Insert Structure | linear | |
Update Date | 2019-12-21 | |
Organism | Gallus gallus(chicken) | |
Product | ornithine decarboxylase | |
Comment | Comment: VALIDATED REFSEQ: This record has undergone validation or preliminary review. The reference sequence was derived from CK606878.1, AJ392686.1, X64710.1 and AADN05000843.1. On Nov 18, 2009 this sequence version replaced XM_419949.2. Sequence Note: This RefSeq record was created from transcript and genomic sequence data to make the sequence consistent with the reference genome assembly. The genomic coordinates used for the transcript record were based on transcript alignments. ##Evidence-Data-START## Transcript exon combination :: ERR2368565.183947.1, ERR2368565.269574.1 [ECO:0000332] RNAseq introns :: mixed/partial sample support SAMEA2201357, SAMEA2201358 [ECO:0000350] ##Evidence-Data-END## |
1 | ATGTCAGGAA TCATGGGTAG CTTCAGCAAA GAAGAACTTG AATTCACCTT CCTTGACGAG |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
RefSeq | NP_001161238.1 |
CDS | 181..1575 |
Translation |
Target ORF information:
Target ORF information:
|
NM_001167766.1 |
1 | ATGTCAGGAA TCATGGGTAG CTTCAGCAAA GAAGAACTTG AATTCACCTT CCTTGACGAG |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
CloneID | OGa00136 | |
Clone ID Related Accession (Same CDS sequence) | XM_015276042.1 , XM_015276041.2 , NM_001167766.1 , XM_015276041.1 | |
Accession Version | XM_015276042.1 Latest version! | Documents for ORF clone product in default vector |
Sequence Information | ORF Nucleotide Sequence (Length: 1395bp) Protein sequence SNP |
|
Vector | pcDNA3.1-C-(k)DYK or customized vector | User Manual |
Clone information | Clone Map | MSDS |
Tag on pcDNA3.1+/C-(K)DYK | C terminal DYKDDDDK tags | |
ORF Insert Method | CloneEZ™ Seamless cloning technology | |
Insert Structure | linear | |
Update Date | 2016-01-03 | |
Organism | Gallus gallus(chicken) | |
Product | ornithine decarboxylase isoform X1 | |
Comment | Comment: MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NW_001471673.3) annotated using gene prediction method: Gnomon, supported by mRNA and EST evidence. Also see: Documentation of NCBI's Annotation Process ##Genome-Annotation-Data-START## Annotation Provider :: NCBI Annotation Status :: Full annotation Annotation Version :: Gallus gallus Annotation Release 103 Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline Annotation Software Version :: 6.5 Annotation Method :: Best-placed RefSeq; Gnomon Features Annotated :: Gene; mRNA; CDS; ncRNA ##Genome-Annotation-Data-END## |
1 | ATGTCAGGAA TCATGGGTAG CTTCAGCAAA GAAGAACTTG AATTCACCTT CCTTGACGAG |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
RefSeq | XP_015131528.1 |
CDS | 184..1578 |
Translation |
Target ORF information:
Target ORF information:
|
XM_015276042.1 |
1 | ATGTCAGGAA TCATGGGTAG CTTCAGCAAA GAAGAACTTG AATTCACCTT CCTTGACGAG |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
CloneID | OGa00136 | |
Clone ID Related Accession (Same CDS sequence) | XM_015276042.1 , XM_015276041.2 , NM_001167766.1 , XM_015276041.1 | |
Accession Version | XM_015276041.2 Latest version! | Documents for ORF clone product in default vector |
Sequence Information | ORF Nucleotide Sequence (Length: 1395bp) Protein sequence SNP |
|
Vector | pcDNA3.1-C-(k)DYK or customized vector | User Manual |
Clone information | Clone Map | MSDS |
Tag on pcDNA3.1+/C-(K)DYK | C terminal DYKDDDDK tags | |
ORF Insert Method | CloneEZ™ Seamless cloning technology | |
Insert Structure | linear | |
Update Date | 2018-05-16 | |
Organism | Gallus gallus(chicken) | |
Product | ornithine decarboxylase isoform X1 | |
Comment | Comment: MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NC_006090.5) annotated using gene prediction method: Gnomon, supported by mRNA and EST evidence. Also see: Documentation of NCBI's Annotation Process On May 17, 2018 this sequence version replaced XM_015276041.1. ##Genome-Annotation-Data-START## Annotation Provider :: NCBI Annotation Status :: Full annotation Annotation Name :: Gallus gallus Annotation Release 104 Annotation Version :: 104 Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline Annotation Software Version :: 8.0 Annotation Method :: Best-placed RefSeq; Gnomon Features Annotated :: Gene; mRNA; CDS; ncRNA ##Genome-Annotation-Data-END## |
1 | ATGTCAGGAA TCATGGGTAG CTTCAGCAAA GAAGAACTTG AATTCACCTT CCTTGACGAG |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
RefSeq | XP_015131527.1 |
CDS | 88..1482 |
Translation |
Target ORF information:
Target ORF information:
|
XM_015276041.2 |
1 | ATGTCAGGAA TCATGGGTAG CTTCAGCAAA GAAGAACTTG AATTCACCTT CCTTGACGAG |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
CloneID | OGa00136 | |
Clone ID Related Accession (Same CDS sequence) | XM_015276042.1 , XM_015276041.2 , NM_001167766.1 , XM_015276041.1 | |
Accession Version | XM_015276041.1 | Documents for ORF clone product in default vector |
Sequence Information | ORF Nucleotide Sequence (Length: 1395bp) Protein sequence SNP |
|
Vector | pcDNA3.1-C-(k)DYK or customized vector | User Manual |
Clone information | Clone Map | MSDS |
Tag on pcDNA3.1+/C-(K)DYK | C terminal DYKDDDDK tags | |
ORF Insert Method | CloneEZ™ Seamless cloning technology | |
Insert Structure | linear | |
Update Date | 2016-01-03 | |
Organism | Gallus gallus(chicken) | |
Product | ornithine decarboxylase isoform X1 | |
Comment | Comment: MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NW_001471673.3) annotated using gene prediction method: Gnomon, supported by mRNA and EST evidence. Also see: Documentation of NCBI's Annotation Process ##Genome-Annotation-Data-START## Annotation Provider :: NCBI Annotation Status :: Full annotation Annotation Version :: Gallus gallus Annotation Release 103 Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline Annotation Software Version :: 6.5 Annotation Method :: Best-placed RefSeq; Gnomon Features Annotated :: Gene; mRNA; CDS; ncRNA ##Genome-Annotation-Data-END## |
1 | ATGTCAGGAA TCATGGGTAG CTTCAGCAAA GAAGAACTTG AATTCACCTT CCTTGACGAG |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
RefSeq | XP_015131527.1 |
CDS | 369..1763 |
Translation |
Target ORF information:
Target ORF information:
|
XM_015276041.1 |
1 | ATGTCAGGAA TCATGGGTAG CTTCAGCAAA GAAGAACTTG AATTCACCTT CCTTGACGAG |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
Ornithine decarboxylase gene is a positional candidate gene affecting growth and carcass traits in F? intercross chickens. |
A large database of chicken bursal ESTs as a resource for the analysis of vertebrate gene function. |
Molecular cloning and sequence analysis of a chicken ornithine decarboxylase cDNA. |