Gene Symbol | TMEM53 |
Entrez Gene ID | 424581 |
Full Name | transmembrane protein 53 |
General protein information |
|
Gene Type | protein-coding |
Organism | Gallus gallus(chicken) |
ORF » Species Summary » Gallus gallus » TMEM53 cDNA ORF clone
gRNAs
Gene Symbol | TMEM53 |
Entrez Gene ID | 424581 |
Full Name | transmembrane protein 53 |
General protein information |
|
Gene Type | protein-coding |
Organism | Gallus gallus(chicken) |
mRNA | Protein | Name |
---|---|---|
XM_015291002.1 | XP_015146488.1 | transmembrane protein 53 isoform X1 |
NM_001277580.1 | NP_001264509.1 | transmembrane protein 53 |
XM_015291002.2 | XP_015146488.1 | transmembrane protein 53 isoform X1 |
XM_015291003.2 | XP_015146489.1 | transmembrane protein 53 isoform X1 |
XM_015291003.1 | XP_015146489.1 | transmembrane protein 53 isoform X1 |
TMEM53 | XP_002801564.1 | |
Bos taurus (cattle) | TMEM53 | NP_001033661.1 |
Mus musculus (house mouse) | Tmem53 | NP_001272741.1 |
Rattus norvegicus (Norway rat) | Tmem53 | NP_001101434.1 |
Danio rerio (zebrafish) | tmem53 | NP_001002637.1 |
Oryza sativa (rice) | Os06g0730300 | NP_001058655.1 |
Xenopus tropicalis (tropical clawed frog) | tmem53 | NP_001107322.1 |
Caenorhabditis elegans (roundworm) | C09B8.4 | NP_509006.2 |
Pan troglodytes (chimpanzee) | TMEM53 | XP_513099.3 |
Gallus gallus (chicken) | TMEM53 | NP_001264509.1 |
Homo sapiens (human) | TMEM53 | NP_078863.2 |
Caenorhabditis elegans (roundworm) | T10B11.6 | NP_491980.1 |
Caenorhabditis elegans (roundworm) | T24H10.4 | NP_495945.2 |
Arabidopsis thaliana (thale cress) | AT3G19970 | NP_566652.1 |
Canis lupus familiaris (dog) | TMEM53 | XP_005629146.1 |
Drosophila melanogaster (fruit fly) | CG8245 | NP_610178.2 |
Anopheles gambiae (African malaria mosquito) | AgaP_AGAP009586 | XP_318608.3 |
ESTs from brain and testis of White Leghorn and red junglefowl: annotation, bioinformatic classification of unknown transcripts and analysis of expression levels.
Savolainen P, Fitzsimmons C, Arvestad L, Andersson L, Lundeberg J
Cytogenetic and genome research111(1)79-87(2005)
GeneRIFs: Gene References Into Functions What's a GeneRIF?
The following TMEM53 gene cDNA ORF clone sequences were retrieved from the NCBI Reference Sequence Database (RefSeq). These sequences represent the protein coding region of the TMEM53 cDNA ORF which is encoded by the open reading frame (ORF) sequence. ORF sequences can be delivered in our standard vector, pcDNA3.1+/C-(K)DYK or the vector of your choice as an expression/transfection-ready ORF clone. Not the clone you want? Click here to find your clone.
CloneID | OGa25569 | |
Clone ID Related Accession (Same CDS sequence) | NM_001277580.1 | |
Accession Version | NM_001277580.1 Latest version! | Documents for ORF clone product in default vector |
Sequence Information | ORF Nucleotide Sequence (Length: 831bp) Protein sequence SNP |
|
Vector | pcDNA3.1-C-(k)DYK or customized vector | ![]() |
Clone information | Clone Map | ![]() |
Tag on pcDNA3.1+/C-(K)DYK | C terminal DYKDDDDK tags | |
ORF Insert Method | CloneEZ™ Seamless cloning technology | |
Insert Structure | linear | |
Update Date | 2018-05-20 | |
Organism | Gallus gallus(chicken) | |
Product | transmembrane protein 53 | |
Comment | Comment: VALIDATED REFSEQ: This record has undergone validation or preliminary review. The reference sequence was derived from CN233827.1, BX934725.1 and BX933889.2. On Apr 12, 2013 this sequence version replaced XM_422420.3. Sequence Note: This RefSeq record was created from transcript data from different strains because no single transcript from the same strain was available for the full length of the gene. The extent of this transcript is supported by transcript alignments. ##Evidence-Data-START## Transcript exon combination :: CN233827.1, BX934725.1 [ECO:0000332] ##Evidence-Data-END## |
1 | ATGGGGGCCG GCGAGCTGGA GGCAACGGTG GAGCTGGCGC CGGGGGCGGC CCGCGGGAGC |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
RefSeq | NP_001264509.1 |
CDS | 28..858 |
Translation |
Target ORF information:
Target ORF information:
|
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1 | ATGGGGGCCG GCGAGCTGGA GGCAACGGTG GAGCTGGCGC CGGGGGCGGC CCGCGGGAGC |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
CloneID | OGa39359 | |
Clone ID Related Accession (Same CDS sequence) | XM_015291002.1 , XM_015291002.2 , XM_015291003.2 , XM_015291003.1 | |
Accession Version | XM_015291002.1 | Documents for ORF clone product in default vector |
Sequence Information | ORF Nucleotide Sequence (Length: 627bp) Protein sequence SNP |
|
Vector | pcDNA3.1-C-(k)DYK or customized vector | ![]() |
Clone information | Clone Map | ![]() |
Tag on pcDNA3.1+/C-(K)DYK | C terminal DYKDDDDK tags | |
ORF Insert Method | CloneEZ™ Seamless cloning technology | |
Insert Structure | linear | |
Update Date | 2016-01-03 | |
Organism | Gallus gallus(chicken) | |
Product | transmembrane protein 53 isoform X1 | |
Comment | Comment: MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NT_455913.1) annotated using gene prediction method: Gnomon, supported by EST evidence. Also see: Documentation of NCBI's Annotation Process ##Genome-Annotation-Data-START## Annotation Provider :: NCBI Annotation Status :: Full annotation Annotation Version :: Gallus gallus Annotation Release 103 Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline Annotation Software Version :: 6.5 Annotation Method :: Best-placed RefSeq; Gnomon Features Annotated :: Gene; mRNA; CDS; ncRNA ##Genome-Annotation-Data-END## |
1 | ATGATATTCT TCTCTGAGAG CTTTGGCATC AAATCCCTCC AGACCCCAGC CAAGAGACTC |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
RefSeq | XP_015146488.1 |
CDS | 257..883 |
Translation |
Target ORF information:
Target ORF information:
|
![]() |
1 | ATGATATTCT TCTCTGAGAG CTTTGGCATC AAATCCCTCC AGACCCCAGC CAAGAGACTC |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
CloneID | OGa39359 | |
Clone ID Related Accession (Same CDS sequence) | XM_015291002.1 , XM_015291002.2 , XM_015291003.2 , XM_015291003.1 | |
Accession Version | XM_015291002.2 Latest version! | Documents for ORF clone product in default vector |
Sequence Information | ORF Nucleotide Sequence (Length: 627bp) Protein sequence SNP |
|
Vector | pcDNA3.1-C-(k)DYK or customized vector | ![]() |
Clone information | Clone Map | ![]() |
Tag on pcDNA3.1+/C-(K)DYK | C terminal DYKDDDDK tags | |
ORF Insert Method | CloneEZ™ Seamless cloning technology | |
Insert Structure | linear | |
Update Date | 2018-05-16 | |
Organism | Gallus gallus(chicken) | |
Product | transmembrane protein 53 isoform X1 | |
Comment | Comment: MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NC_006095.5) annotated using gene prediction method: Gnomon, supported by mRNA and EST evidence. Also see: Documentation of NCBI's Annotation Process On May 17, 2018 this sequence version replaced XM_015291002.1. ##Genome-Annotation-Data-START## Annotation Provider :: NCBI Annotation Status :: Full annotation Annotation Name :: Gallus gallus Annotation Release 104 Annotation Version :: 104 Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline Annotation Software Version :: 8.0 Annotation Method :: Best-placed RefSeq; Gnomon Features Annotated :: Gene; mRNA; CDS; ncRNA ##Genome-Annotation-Data-END## |
1 | ATGATATTCT TCTCTGAGAG CTTTGGCATC AAATCCCTCC AGACCCCAGC CAAGAGACTC |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
RefSeq | XP_015146488.1 |
CDS | 234..860 |
Translation |
Target ORF information:
Target ORF information:
|
![]() |
1 | ATGATATTCT TCTCTGAGAG CTTTGGCATC AAATCCCTCC AGACCCCAGC CAAGAGACTC |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
CloneID | OGa39359 | |
Clone ID Related Accession (Same CDS sequence) | XM_015291002.1 , XM_015291002.2 , XM_015291003.2 , XM_015291003.1 | |
Accession Version | XM_015291003.2 Latest version! | Documents for ORF clone product in default vector |
Sequence Information | ORF Nucleotide Sequence (Length: 627bp) Protein sequence SNP |
|
Vector | pcDNA3.1-C-(k)DYK or customized vector | ![]() |
Clone information | Clone Map | ![]() |
Tag on pcDNA3.1+/C-(K)DYK | C terminal DYKDDDDK tags | |
ORF Insert Method | CloneEZ™ Seamless cloning technology | |
Insert Structure | linear | |
Update Date | 2018-05-16 | |
Organism | Gallus gallus(chicken) | |
Product | transmembrane protein 53 isoform X1 | |
Comment | Comment: MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NC_006095.5) annotated using gene prediction method: Gnomon, supported by mRNA and EST evidence. Also see: Documentation of NCBI's Annotation Process On May 17, 2018 this sequence version replaced XM_015291003.1. ##Genome-Annotation-Data-START## Annotation Provider :: NCBI Annotation Status :: Full annotation Annotation Name :: Gallus gallus Annotation Release 104 Annotation Version :: 104 Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline Annotation Software Version :: 8.0 Annotation Method :: Best-placed RefSeq; Gnomon Features Annotated :: Gene; mRNA; CDS; ncRNA ##Genome-Annotation-Data-END## |
1 | ATGATATTCT TCTCTGAGAG CTTTGGCATC AAATCCCTCC AGACCCCAGC CAAGAGACTC |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
RefSeq | XP_015146489.1 |
CDS | 171..797 |
Translation |
Target ORF information:
Target ORF information:
|
![]() |
1 | ATGATATTCT TCTCTGAGAG CTTTGGCATC AAATCCCTCC AGACCCCAGC CAAGAGACTC |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
CloneID | OGa39359 | |
Clone ID Related Accession (Same CDS sequence) | XM_015291002.1 , XM_015291002.2 , XM_015291003.2 , XM_015291003.1 | |
Accession Version | XM_015291003.1 | Documents for ORF clone product in default vector |
Sequence Information | ORF Nucleotide Sequence (Length: 627bp) Protein sequence SNP |
|
Vector | pcDNA3.1-C-(k)DYK or customized vector | ![]() |
Clone information | Clone Map | ![]() |
Tag on pcDNA3.1+/C-(K)DYK | C terminal DYKDDDDK tags | |
ORF Insert Method | CloneEZ™ Seamless cloning technology | |
Insert Structure | linear | |
Update Date | 2016-01-03 | |
Organism | Gallus gallus(chicken) | |
Product | transmembrane protein 53 isoform X1 | |
Comment | Comment: MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NT_455913.1) annotated using gene prediction method: Gnomon, supported by EST evidence. Also see: Documentation of NCBI's Annotation Process ##Genome-Annotation-Data-START## Annotation Provider :: NCBI Annotation Status :: Full annotation Annotation Version :: Gallus gallus Annotation Release 103 Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline Annotation Software Version :: 6.5 Annotation Method :: Best-placed RefSeq; Gnomon Features Annotated :: Gene; mRNA; CDS; ncRNA ##Genome-Annotation-Data-END## |
1 | ATGATATTCT TCTCTGAGAG CTTTGGCATC AAATCCCTCC AGACCCCAGC CAAGAGACTC |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
RefSeq | XP_015146489.1 |
CDS | 143..769 |
Translation |
Target ORF information:
Target ORF information:
|
![]() |
1 | ATGATATTCT TCTCTGAGAG CTTTGGCATC AAATCCCTCC AGACCCCAGC CAAGAGACTC |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
ESTs from brain and testis of White Leghorn and red junglefowl: annotation, bioinformatic classification of unknown transcripts and analysis of expression levels. |