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PCDHA11 cDNA ORF clone, Gallus gallus(chicken)

Summary

Gene Symbol PCDHA11
Entrez Gene ID 497221
Full Name protocadherin alpha 11
Synonyms CNRv11
General protein information
Preferred Names

protocadherin alpha 11

Names

protocadherin alpha-11
cadherin-related neuronal receptor 11
Gene Type protein-coding
Organism Gallus gallus(chicken)

Reference Sequences (RefSeq)

mRNA and Protein(s)

mRNA Protein Name
NM_001111128.1 NP_001104598.1 protocadherin alpha-11 precursor

Pathways from BioSystems


Homologies


LOC698874 XP_002804600.1
Gallus gallus (chicken) PCDHA7 NP_001104607.1
Gallus gallus (chicken) PCDHA9 NP_001104609.1
Gallus gallus (chicken) PCDHA3 NP_001104603.1
Homo sapiens (human) PCDHA2 NP_061728.1
Pan troglodytes (chimpanzee) PCDHA2 NP_001076052.1
Mus musculus (house mouse) Pcdha2 NP_932785.1
Gallus gallus (chicken) PCDHA11 NP_001104598.1
Gallus gallus (chicken) PCDHA4 NP_001104604.1
Gallus gallus (chicken) PCDHA12 NP_001104599.1
Rattus norvegicus (Norway rat) Pcdha2 NP_955798.1
Gallus gallus (chicken) PCDHA2 NP_001104602.1
Gallus gallus (chicken) PCDHA6 NP_001104606.1

Gene Ontology


Bibliography

Related articles in PubMed

Distinct genomic sequence of the CNR/Pcdhalpha genes in chicken.
Sugino H, Yanase H, Hamada S, Kurokawa K, Asakawa S, Shimizu N, Yagi T
Biochemical and biophysical research communications316(2)437-45(2004 Apr)

GeneRIFs: Gene References Into Functions What's a GeneRIF?

Complete genomic sequence and organization of the Gallus gallus protocadherin alpha gene
Title: Distinct genomic sequence of the CNR/Pcdhalpha genes in chicken.

The following PCDHA11 gene cDNA ORF clone sequences were retrieved from the NCBI Reference Sequence Database (RefSeq). These sequences represent the protein coding region of the PCDHA11 cDNA ORF which is encoded by the open reading frame (ORF) sequence. ORF sequences can be delivered in our standard vector, pcDNA3.1+/C-(K)DYK or the vector of your choice as an expression/transfection-ready ORF clone. Not the clone you want? Click here to find your clone.

***CloneID Accession No. Definition **Vector *Turnaround time Price (USD) Select
OGa01131 NM_001111128.1
Latest version!		 Gallus gallus protocadherin alpha 11 (PCDHA11), mRNA. pcDNA3.1+/C-(K)DYK or customized vector TBD $510.30
$729.00

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** You may select a custom vector to replace pcDNA3.1+/C-(K)DYK after clone is added to cart.

** GenScript guarantees 100% sequence accuracy of all synthetic DNA constructs we deliver, but we do not guarantee protein expression in your experimental system. Protein expression is influenced by many factors that may vary between experiments or laboratories. In addition, please pay attention to the signal peptide, propeptide and transit peptide in target ORF, which may affect the choice of vector (N/C terminal tag vector).

***One clone ID might be correlated to multiple accession numbers, which share the same CDS sequence.

Reference Sequences (Refseq)


CloneID OGa01131
Clone ID Related Accession (Same CDS sequence) NM_001111128.1
Accession Version NM_001111128.1 Latest version! Documents for ORF clone product in default vector
Sequence Information ORF Nucleotide Sequence (Length: 2988bp)
Protein sequence
SNP
Vector pcDNA3.1+/C-(K)DYK or customized vector User Manual
Clone information Clone Map MSDS
Tag on pcDNA3.1+/C-(K)DYK C terminal DYKDDDDK tags
ORF Insert Method CloneEZ™ Seamless cloning technology
Insert Structure linear
Update Date 2016-08-19
Organism Gallus gallus(chicken)
Product protocadherin alpha-11 precursor
Comment Comment: PROVISIONAL REFSEQ: This record has not yet been subject to final NCBI review. The reference sequence was derived from AY519500.1. 

1
61
121
181
241
301
361
421
481
541
601
661
721
781
841
901
961
1021
1081
1141
1201
1261
1321
1381
1441
1501
1561
1621
1681
1741
1801
1861
1921
1981
2041
2101
2161
2221
2281
2341
2401
2461
2521
2581
2641
2701
2761
2821
2881
2941
ATGGTCGGCG TTGGAGCAGC GCGGCGGAGC TGGGCGGCCG CGGTGGTGGT GCTGCAGGCG 
GCCTGGGCGC TGGTCGGCGG GCAGGTGCGG TACTCGGTGC CGGAGGAAGC CGAGGCCGGC 
ACGGTGGTGG GGCGGCTGGC GCAGGACCTG GGCCTGGAGG CGGGCGAGGC GGAGGCGGGG 
CGGCTGCGTC TGGTGGCGCG GGGCCGGCGG GCGAGCGTGG AGGTGAGCGG GGCGAGCGGG 
GCGCTGGTGG TGAGCTCGCG GCTGGACCGG GAGGAGCTGT GCGGGAAGAG CGCGCCGTGC 
GCCCTGCGTC TGGAGGTGCT GCTGGACCGG CCGCTGCGCG TCTTCCACGT GGAGGTGGAG 
GTCACCGACA TCAACGACAA TGCCCCGCGC TTCCCCGCCG CCTACAAAAA CATCAGCATC 
GCGGAACTGT CGCTGCCCGG GTCGCGGTTC CCTCTGGAGG GCGCGTCGGA TGCGGATATC 
GGTTCGAACG CGCAGCTCTC CTATAAACTA AGTCCCACCG AGCACTTCAC TGTGGATTTT 
CCGAAGGTGG AGGAGGATGG TGAGCCCCTG TTCTTGGTTC TCACAAAACC TCTGGACCGC 
GAGTCGCTGT CCGAGCACCG CTTGGTGCTG ACGGCGAGTG ACGGGGGCAG GCCGGCGCTG 
ACGGGCACGG TGCAGCTGGT GATCTCGGTG CTGGATGCGA ACGACAACGC GCCGCAGTTC 
AACCAGTCGG TGTACAAAGT TCTGCTCCCA GAGAATACTG AACATGGCAC TTTCGTGCTA 
AGGGTAAACG CTATGGATTT GGATGAGGGA ACGAACTGTA ACATCTCATA TTCTCTTACC 
AACTTCTTCC CTCCTAACGC GAAAGACATT TTCGAAATAG AAAAAAACAG TGGCGAGATC 
CATCTAATAG GTTCCTTAGA TTTTGAGGAG GCTGCTGTAT ATCGCATGCA AGTGGACGCA 
CAGGATAAGG GAAATCCACC GCTGAGTGGC CACTGCAAGT TGGTGGTGGA AGTGCTGGAC 
GTGAACGACA ACGCGCCCGA GGTGTGGGTG ACGTCGCTGT CGGTGCCGGT GCCCGAGGAC 
GCGGCGCTGG GGACGGTGGT GGCGCTGCTG AGCGTGTCGG ACCGGGACTC GGGGCCGAAC 
GGGCGGGTGC GCTGCGCGGT GCGGCCGCCG TCGCCGTTCG GGCTGGTGGC GACGTTCGCG 
GGCTCGTACT CGCTGGTGCT GCGGGAGGCG CTGGACCGGG AGCGGGTGTC GGAGTACGAG 
GTGGAGGTGC GTGCGGAGGA CGGCGGGGCG CCGCCGCTGC GCGCCAGCCG CGGGCTGCGG 
GTGCCGGTGT CGGACGTGAA CGACAACGCG CCGGCGTTCG CGCAGGCCGT GTACACGGTG 
CTGGCGCGGG AGAACAACGC GGCGGGCGCG GAGCTGGCGC GGCTGTGGGC GCGGGACCCG 
GACGAGGCGG GCAACGGGCG CGTGAGCTAC TCGGTGGCGG AGGGCGGCGC GGGGACGGGC 
GCGGGCTCGG GCTCGGGCTC GGGGTGGCGT CCGGCGTCGA GCTACGTGTC GGTGGACGCG 
GAGAGCGGGC GCCTGCGTGC GCTGCGTCCG CTGGACTACG AGGAGCTGCA GGTGCTGCAG 
TTCGAGGTGC GGGCGGTGGA CGCGGGGGAG CCGCCGCTGT GCGGCAACGC CACGGTGCAG 
CTGTTCGTGG TGGACGAGAA CGACAACGCG CCGGCGCTGC TGCCGCCTGC GGGCGGCGGG 
CCGTGGCCCT GGGCTGCGGG CGAGGCGGCG GAGCCGGGGT CGCGGCCGCC GGGCTCGGCG 
GGCTCGGCGG TGTCGTCGTG GTCGCTGTGG GCGCGGGCGG CGTGGGGCGC GCCGGCGGGG 
CAGGTGGTGG CGAAGATCCG CGCGGTGGAC GCGGACTCGG GCTACAACGC GTGGCTGCGC 
TACGAGCTGC GGGAGCCGCG GGGCGAGGGC CCGTTCCGCG TGGGGCTGTA CAGCGGCGAG 
GTGAGCACGG CGCGGGCGCT GGAGGAGGCG GACGGCCCGC GGCAGAGGCT GCTGATCGTG 
GTGCGGGACC ACGGGGAGCC GCCGCGCTCG GCCACGGCCA CGCTGAGCGT GTCGCTGGTG 
GAGGGCGCCG AGGCGGCGCT GGCGGCGGTG GGGGCAGGGG CGGTGTCGGT GTCGGCGGGG 
GCGGGGCTGC GGCCGGCGGC GAGCGCGGAG GGCGGATCTG CGGCGTCGGG AGCGTCGGCG 
GCGACGAACG TGTGGCTGGT GGTGGCCATC TGCGCGGTGT CGAGCCTGTT GGTGCTGGCG 
GTGGTGCTGT ACGGGGCCGG GCGCTGGGCG CCGCGGGCGG CGGTGCTGGC GGGGCCCGGT 
CCGGCGACGC TGGTGTGCGC CAGCGAGGTG GGCAGCTGGT CGTACTCGCA GCGCCAGAGC 
CGGAGCCTGT GCGTGGCCAC GGACGGCGCG GGCAAGAGCG ACCTGATGGT GTTCAGCCCC 
AACTGCCCTC CGGCGCCCGG CCCCGCGCCG AAGGAGACGC CGCAGGAGCC GCTCTCTTTG 
CTGGACACGC CAAAACACCC CAATCCTGAC TGGCGCTACT CCGCGTCCCT AAGGGCGGGA 
ATGCAAAGGG TGCTGTGCAT ATGGAGGAGG CAGGGATCTT ACGTGGAGGA CCAGGAGGGC 
CTGACCAGCA GTGGCCAACA GTCTCCAGTG CTACTCCAGC CTGAGGCAGG AGAGGTGTCC 
CCCCCGGTGG GAGCTGGTGT GAACAGCAAC AGCTGGACCT TTAAATTTGG ACCCAGCAAT 
TCGAAACAAG GTGGTCCTGG TGAGTTGCCA GACAAATTCA TTATCCCAGG ATCTCCTGCA 
ATCATCTCCA TCCGGCAGGA GCCACCAAAC AGCCAAATTG ACAAAAGTGA CTTCATAACC 
TTTGGCAAGA AGGAAGAGAC CAAGAAAAAG AAGAAAAAGA AGAAGGGAAA CAAGACTCAG 
GAGAAAAAAG AAAAGGGCAA CAGCACCACT GAGAACAGTG ACCAGTGA

The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.

RefSeq NP_001104598.1
CDS1..2988
Translation

Target ORF information:

RefSeq Version NM_001111128.1
Organism Gallus gallus(chicken)
Definition Gallus gallus protocadherin alpha 11 (PCDHA11), mRNA.

Target ORF information:

Epitope DYKDDDDK
Bacterial selection AMPR
Mammalian selection NeoR
Vector pcDNA3.1+/C-(K)DYK
 NM_001111128.1

ORF Insert Sequence:

1
61
121
181
241
301
361
421
481
541
601
661
721
781
841
901
961
1021
1081
1141
1201
1261
1321
1381
1441
1501
1561
1621
1681
1741
1801
1861
1921
1981
2041
2101
2161
2221
2281
2341
2401
2461
2521
2581
2641
2701
2761
2821
2881
2941
ATGGTCGGCG TTGGAGCAGC GCGGCGGAGC TGGGCGGCCG CGGTGGTGGT GCTGCAGGCG 
GCCTGGGCGC TGGTCGGCGG GCAGGTGCGG TACTCGGTGC CGGAGGAAGC CGAGGCCGGC 
ACGGTGGTGG GGCGGCTGGC GCAGGACCTG GGCCTGGAGG CGGGCGAGGC GGAGGCGGGG 
CGGCTGCGTC TGGTGGCGCG GGGCCGGCGG GCGAGCGTGG AGGTGAGCGG GGCGAGCGGG 
GCGCTGGTGG TGAGCTCGCG GCTGGACCGG GAGGAGCTGT GCGGGAAGAG CGCGCCGTGC 
GCCCTGCGTC TGGAGGTGCT GCTGGACCGG CCGCTGCGCG TCTTCCACGT GGAGGTGGAG 
GTCACCGACA TCAACGACAA TGCCCCGCGC TTCCCCGCCG CCTACAAAAA CATCAGCATC 
GCGGAACTGT CGCTGCCCGG GTCGCGGTTC CCTCTGGAGG GCGCGTCGGA TGCGGATATC 
GGTTCGAACG CGCAGCTCTC CTATAAACTA AGTCCCACCG AGCACTTCAC TGTGGATTTT 
CCGAAGGTGG AGGAGGATGG TGAGCCCCTG TTCTTGGTTC TCACAAAACC TCTGGACCGC 
GAGTCGCTGT CCGAGCACCG CTTGGTGCTG ACGGCGAGTG ACGGGGGCAG GCCGGCGCTG 
ACGGGCACGG TGCAGCTGGT GATCTCGGTG CTGGATGCGA ACGACAACGC GCCGCAGTTC 
AACCAGTCGG TGTACAAAGT TCTGCTCCCA GAGAATACTG AACATGGCAC TTTCGTGCTA 
AGGGTAAACG CTATGGATTT GGATGAGGGA ACGAACTGTA ACATCTCATA TTCTCTTACC 
AACTTCTTCC CTCCTAACGC GAAAGACATT TTCGAAATAG AAAAAAACAG TGGCGAGATC 
CATCTAATAG GTTCCTTAGA TTTTGAGGAG GCTGCTGTAT ATCGCATGCA AGTGGACGCA 
CAGGATAAGG GAAATCCACC GCTGAGTGGC CACTGCAAGT TGGTGGTGGA AGTGCTGGAC 
GTGAACGACA ACGCGCCCGA GGTGTGGGTG ACGTCGCTGT CGGTGCCGGT GCCCGAGGAC 
GCGGCGCTGG GGACGGTGGT GGCGCTGCTG AGCGTGTCGG ACCGGGACTC GGGGCCGAAC 
GGGCGGGTGC GCTGCGCGGT GCGGCCGCCG TCGCCGTTCG GGCTGGTGGC GACGTTCGCG 
GGCTCGTACT CGCTGGTGCT GCGGGAGGCG CTGGACCGGG AGCGGGTGTC GGAGTACGAG 
GTGGAGGTGC GTGCGGAGGA CGGCGGGGCG CCGCCGCTGC GCGCCAGCCG CGGGCTGCGG 
GTGCCGGTGT CGGACGTGAA CGACAACGCG CCGGCGTTCG CGCAGGCCGT GTACACGGTG 
CTGGCGCGGG AGAACAACGC GGCGGGCGCG GAGCTGGCGC GGCTGTGGGC GCGGGACCCG 
GACGAGGCGG GCAACGGGCG CGTGAGCTAC TCGGTGGCGG AGGGCGGCGC GGGGACGGGC 
GCGGGCTCGG GCTCGGGCTC GGGGTGGCGT CCGGCGTCGA GCTACGTGTC GGTGGACGCG 
GAGAGCGGGC GCCTGCGTGC GCTGCGTCCG CTGGACTACG AGGAGCTGCA GGTGCTGCAG 
TTCGAGGTGC GGGCGGTGGA CGCGGGGGAG CCGCCGCTGT GCGGCAACGC CACGGTGCAG 
CTGTTCGTGG TGGACGAGAA CGACAACGCG CCGGCGCTGC TGCCGCCTGC GGGCGGCGGG 
CCGTGGCCCT GGGCTGCGGG CGAGGCGGCG GAGCCGGGGT CGCGGCCGCC GGGCTCGGCG 
GGCTCGGCGG TGTCGTCGTG GTCGCTGTGG GCGCGGGCGG CGTGGGGCGC GCCGGCGGGG 
CAGGTGGTGG CGAAGATCCG CGCGGTGGAC GCGGACTCGG GCTACAACGC GTGGCTGCGC 
TACGAGCTGC GGGAGCCGCG GGGCGAGGGC CCGTTCCGCG TGGGGCTGTA CAGCGGCGAG 
GTGAGCACGG CGCGGGCGCT GGAGGAGGCG GACGGCCCGC GGCAGAGGCT GCTGATCGTG 
GTGCGGGACC ACGGGGAGCC GCCGCGCTCG GCCACGGCCA CGCTGAGCGT GTCGCTGGTG 
GAGGGCGCCG AGGCGGCGCT GGCGGCGGTG GGGGCAGGGG CGGTGTCGGT GTCGGCGGGG 
GCGGGGCTGC GGCCGGCGGC GAGCGCGGAG GGCGGATCTG CGGCGTCGGG AGCGTCGGCG 
GCGACGAACG TGTGGCTGGT GGTGGCCATC TGCGCGGTGT CGAGCCTGTT GGTGCTGGCG 
GTGGTGCTGT ACGGGGCCGG GCGCTGGGCG CCGCGGGCGG CGGTGCTGGC GGGGCCCGGT 
CCGGCGACGC TGGTGTGCGC CAGCGAGGTG GGCAGCTGGT CGTACTCGCA GCGCCAGAGC 
CGGAGCCTGT GCGTGGCCAC GGACGGCGCG GGCAAGAGCG ACCTGATGGT GTTCAGCCCC 
AACTGCCCTC CGGCGCCCGG CCCCGCGCCG AAGGAGACGC CGCAGGAGCC GCTCTCTTTG 
CTGGACACGC CAAAACACCC CAATCCTGAC TGGCGCTACT CCGCGTCCCT AAGGGCGGGA 
ATGCAAAGGG TGCTGTGCAT ATGGAGGAGG CAGGGATCTT ACGTGGAGGA CCAGGAGGGC 
CTGACCAGCA GTGGCCAACA GTCTCCAGTG CTACTCCAGC CTGAGGCAGG AGAGGTGTCC 
CCCCCGGTGG GAGCTGGTGT GAACAGCAAC AGCTGGACCT TTAAATTTGG ACCCAGCAAT 
TCGAAACAAG GTGGTCCTGG TGAGTTGCCA GACAAATTCA TTATCCCAGG ATCTCCTGCA 
ATCATCTCCA TCCGGCAGGA GCCACCAAAC AGCCAAATTG ACAAAAGTGA CTTCATAACC 
TTTGGCAAGA AGGAAGAGAC CAAGAAAAAG AAGAAAAAGA AGAAGGGAAA CAAGACTCAG 
GAGAAAAAAG AAAAGGGCAA CAGCACCACT GAGAACAGTG ACCAGTGA

The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.

PubMed

book

Distinct genomic sequence of the CNR/Pcdhalpha genes in chicken.
Biochemical and biophysical research communications316(2)437-45(2004 Apr)
Sugino H,Yanase H,Hamada S,Kurokawa K,Asakawa S,Shimizu N,Yagi T