Transcriptome analysis of human gastric cancer.
Oh JH, Yang JO, Hahn Y, Kim MR, Byun SS, Jeon YJ, Kim JM, Song KS, Noh SM, Kim S, Yoo HS, Kim YS, Kim NS Mammalian genome : official journal of the International Mammalian Genome Society16(12)942-54(2005 Dec)
The following TMEM147 gene cDNA ORF clone sequences were retrieved from the NCBI Reference Sequence Database (RefSeq). These sequences represent the protein coding region of the TMEM147 cDNA ORF which is encoded by the open reading frame (ORF) sequence. ORF sequences can be delivered in our standard vector, pcDNA3.1+/C-(K)DYK or the vector of your choice as an expression/transfection-ready ORF clone. Not the clone you want? Click here to find your clone.
Comment: VALIDATED REFSEQ: This record has undergone validation or preliminary review. The reference sequence was derived from BM423809.1, BG697070.1, AW473288.1 and AW130399.1.
Transcript Variant: This variant (2) lacks a splice site in the 5' coding region and initiates translation at a downstream, in-frame start codon, compared to variant 1. The encoded isoform (2) has a shorter N-terminus, compared to isoform 1.
##Evidence-Data-START##
Transcript exon combination :: SRR1163658.47134.1, SRR1163658.279395.1 [ECO:0000332]
RNAseq introns :: single sample supports all introns SAMEA1965299, SAMEA1966682 [ECO:0000348]
##Evidence-Data-END##
COMPLETENESS: complete on the 3' end.
Comment: VALIDATED REFSEQ: This record has undergone validation or preliminary review. The reference sequence was derived from BM423809.1, BG697070.1, AW473288.1 and AW130399.1. On May 31, 2019 this sequence version replaced NM_001242597.1.
Transcript Variant: This variant (2) lacks a splice site in the 5' coding region and initiates translation at a downstream, in-frame start codon, compared to variant 1. The encoded isoform (2) has a shorter N-terminus, compared to isoform 1.
##Evidence-Data-START##
Transcript exon combination :: SRR1163657.226436.1, SRR1163657.26227.1 [ECO:0000332]
RNAseq introns :: single sample supports all introns SAMEA1965299, SAMEA1966682 [ECO:0000348]
##Evidence-Data-END##
COMPLETENESS: complete on the 3' end.
Comment: VALIDATED REFSEQ: This record has undergone validation or preliminary review. The reference sequence was derived from BM423809.1, BC001118.2 and AW130399.1. On Nov 23, 2018 this sequence version replaced NM_032635.3.
Transcript Variant: This variant (1) encodes the longest isoform (1).
##Evidence-Data-START##
Transcript exon combination :: SRR5189658.62246.1, SRR1163655.97135.1 [ECO:0000332]
RNAseq introns :: single sample supports all introns SAMEA1965299, SAMEA1966682 [ECO:0000348]
##Evidence-Data-END##
##RefSeq-Attributes-START##
MANE Ensembl match :: ENST00000222284.10/ ENSP00000222284.4
RefSeq Select criteria :: based on conservation, expression, longest protein
##RefSeq-Attributes-END##
COMPLETENESS: full length.
Comment: VALIDATED REFSEQ: This record has undergone validation or preliminary review. The reference sequence was derived from BM423809.1, BC001118.2 and AW130399.1. On Jun 16, 2011 this sequence version replaced NM_032635.2.
Transcript Variant: This variant (1) encodes the longest isoform (1).
##Evidence-Data-START##
Transcript exon combination :: SRR1163657.269744.1, SRR1163655.444231.1 [ECO:0000332]
RNAseq introns :: single sample supports all introns SAMEA1965299, SAMEA1966682 [ECO:0000348]
##Evidence-Data-END##
COMPLETENESS: complete on the 3' end.
Comment: VALIDATED REFSEQ: This record has undergone validation or preliminary review. The reference sequence was derived from BM423809.1, BM765457.1 and AW130399.1.
Transcript Variant: This variant (3) lacks two consecutive exons in the coding region but maintains the reading frame, compared to variant 1. The encoded isoform (3) is shorter than isoform 1.
##Evidence-Data-START##
Transcript exon combination :: BM765457.1 [ECO:0000332]
RNAseq introns :: single sample supports all introns SAMEA1968540, SAMEA2142348 [ECO:0000348]
##Evidence-Data-END##
COMPLETENESS: complete on the 3' end.
Comment: VALIDATED REFSEQ: This record has undergone validation or preliminary review. The reference sequence was derived from BM423809.1, BM765457.1 and AW130399.1. On May 31, 2019 this sequence version replaced NM_001242598.1.
Transcript Variant: This variant (3) lacks two consecutive exons in the coding region but maintains the reading frame, compared to variant 1. The encoded isoform (3) is shorter than isoform 1.
##Evidence-Data-START##
Transcript exon combination :: BM765457.1, DRR138512.395010.1 [ECO:0000332]
RNAseq introns :: single sample supports all introns SAMEA1968540, SAMEA2142348 [ECO:0000348]
##Evidence-Data-END##
COMPLETENESS: complete on the 3' end.