Gene Symbol | RPUSD1 |
Entrez Gene ID | 113000 |
Full Name | RNA pseudouridylate synthase domain containing 1 |
Synonyms | C16orf40,RLUCL |
General protein information |
|
Gene Type | protein-coding |
Organism | Homo sapiens(human) |
Genome |
ORF » Species Summary » Homo sapiens » RPUSD1 cDNA ORF clone
Gene Symbol | RPUSD1 |
Entrez Gene ID | 113000 |
Full Name | RNA pseudouridylate synthase domain containing 1 |
Synonyms | C16orf40,RLUCL |
General protein information |
|
Gene Type | protein-coding |
Organism | Homo sapiens(human) |
Genome |
mRNA | Protein | Name |
---|---|---|
NM_001324086.1 | NP_001311015.1 | RNA pseudouridylate synthase domain-containing protein 1 isoform 2 |
NM_001324410.1 | NP_001311339.1 | RNA pseudouridylate synthase domain-containing protein 1 isoform 3 |
NM_001324415.1 | NP_001311344.1 | RNA pseudouridylate synthase domain-containing protein 1 isoform 5 |
NM_001324412.2 | NP_001311341.1 | RNA pseudouridylate synthase domain-containing protein 1 isoform 5 |
NM_058192.3 | NP_478072.1 | RNA pseudouridylate synthase domain-containing protein 1 isoform 1 |
NM_001324415.2 | NP_001311344.1 | RNA pseudouridylate synthase domain-containing protein 1 isoform 5 |
NM_001369660.1 | NP_001356589.1 | RNA pseudouridylate synthase domain-containing protein 1 isoform 5 |
NM_001369658.1 | NP_001356587.1 | RNA pseudouridylate synthase domain-containing protein 1 isoform 6 |
NM_001324414.1 | NP_001311343.1 | RNA pseudouridylate synthase domain-containing protein 1 isoform 5 |
NM_001324412.1 | NP_001311341.1 | RNA pseudouridylate synthase domain-containing protein 1 isoform 5 |
NM_001324410.2 | NP_001311339.1 | RNA pseudouridylate synthase domain-containing protein 1 isoform 3 |
NM_001324413.1 | NP_001311342.1 | RNA pseudouridylate synthase domain-containing protein 1 isoform 5 |
NM_001324411.1 | NP_001311340.1 | RNA pseudouridylate synthase domain-containing protein 1 isoform 4 |
XM_024450144.1 | XP_024305912.1 | RNA pseudouridylate synthase domain-containing protein 1 isoform X1 |
NM_058192.2 | NP_478072.1 | RNA pseudouridylate synthase domain-containing protein 1 isoform 1 |
NM_001324411.2 | NP_001311340.1 | RNA pseudouridylate synthase domain-containing protein 1 isoform 4 |
NM_001324086.2 | NP_001311015.1 | RNA pseudouridylate synthase domain-containing protein 1 isoform 2 |
NM_001324413.2 | NP_001311342.1 | RNA pseudouridylate synthase domain-containing protein 1 isoform 5 |
NM_001324414.2 | NP_001311343.1 | RNA pseudouridylate synthase domain-containing protein 1 isoform 5 |
NM_001369659.1 | NP_001356588.1 | RNA pseudouridylate synthase domain-containing protein 1 isoform 3 |
Pan troglodytes (chimpanzee) | RPUSD1 | XP_510721.3 |
Canis lupus familiaris (dog) | RPUSD1 | XP_005621794.1 |
Gallus gallus (chicken) | RPUSD1 | XP_003642166.1 |
Mus musculus (house mouse) | Rpusd1 | NP_082285.1 |
Rattus norvegicus (Norway rat) | Rpusd1 | NP_001099244.1 |
Xenopus tropicalis (tropical clawed frog) | rpusd1 | XP_002935894.1 |
Homo sapiens (human) | RPUSD1 | NP_478072.1 |
Bos taurus (cattle) | RPUSD1 | NP_001069342.1 |
Danio rerio (zebrafish) | rpusd1 | NP_001070221.1 |
Anopheles gambiae (African malaria mosquito) | AgaP_AGAP004401 | XP_313685.5 |
Transcriptome analysis of human gastric cancer.
Oh JH, Yang JO, Hahn Y, Kim MR, Byun SS, Jeon YJ, Kim JM, Song KS, Noh SM, Kim S, Yoo HS, Kim YS, Kim NS
Mammalian genome : official journal of the International Mammalian Genome Society16(12)942-54(2005 Dec)
Sequence, structure and pathology of the fully annotated terminal 2 Mb of the short arm of human chromosome 16.
Daniels RJ, Peden JF, Lloyd C, Horsley SW, Clark K, Tufarelli C, Kearney L, Buckle VJ, Doggett NA, Flint J, Higgs DR
Human molecular genetics10(4)339-52(2001 Feb)
GeneRIFs: Gene References Into Functions What's a GeneRIF?
The following RPUSD1 gene cDNA ORF clone sequences were retrieved from the NCBI Reference Sequence Database (RefSeq). These sequences represent the protein coding region of the RPUSD1 cDNA ORF which is encoded by the open reading frame (ORF) sequence. ORF sequences can be delivered in our standard vector, pcDNA3.1+/C-(K)DYK or the vector of your choice as an expression/transfection-ready ORF clone. Not the clone you want? Click here to find your clone.
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CloneID | OHu05715 | |
Clone ID Related Accession (Same CDS sequence) | NM_058192.3 , NM_058192.2 | |
Accession Version | NM_058192.3 Latest version! | Documents for ORF clone product in default vector |
Sequence Information | ORF Nucleotide Sequence (Length: 939bp) Protein sequence SNP |
|
Vector | pcDNA3.1-C-(k)DYK or customized vector | User Manual |
Clone information | Clone Map | MSDS |
Tag on pcDNA3.1+/C-(K)DYK | C terminal DYKDDDDK tags | |
ORF Insert Method | CloneEZ™ Seamless cloning technology | |
Insert Structure | linear | |
Update Date | 2019-08-21 | |
Organism | Homo sapiens(human) | |
Product | RNA pseudouridylate synthase domain-containing protein 1 isoform 1 | |
Comment | Comment: VALIDATED REFSEQ: This record has undergone validation or preliminary review. The reference sequence was derived from BG686882.1, BM763460.1, BC011783.2 and CB529100.1. This sequence is a reference standard in the RefSeqGene project. On Nov 23, 2018 this sequence version replaced NM_058192.2. ##Evidence-Data-START## Transcript exon combination :: SRR3476690.237804.1, SRR1163658.337473.1 [ECO:0000332] RNAseq introns :: single sample supports all introns SAMEA2145743, SAMEA2154125 [ECO:0000348] ##Evidence-Data-END## ##RefSeq-Attributes-START## MANE Ensembl match :: ENST00000007264.7/ ENSP00000007264.2 RefSeq Select criteria :: based on conservation, expression ##RefSeq-Attributes-END## COMPLETENESS: full length. |
1 | ATGGAGCCAG GCAGCGTGGA GAACCTGTCC ATCGTGTACC GGAGCCGCGA CTTCCTGGTG |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
RefSeq | NP_478072.1 |
CDS | 134..1072 |
Translation |
Target ORF information:
Target ORF information:
|
NM_058192.3 |
1 | ATGGAGCCAG GCAGCGTGGA GAACCTGTCC ATCGTGTACC GGAGCCGCGA CTTCCTGGTG |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
CloneID | OHu05715 | |
Clone ID Related Accession (Same CDS sequence) | NM_058192.3 , NM_058192.2 | |
Accession Version | NM_058192.2 | Documents for ORF clone product in default vector |
Sequence Information | ORF Nucleotide Sequence (Length: 939bp) Protein sequence SNP |
|
Vector | pcDNA3.1-C-(k)DYK or customized vector | User Manual |
Clone information | Clone Map | MSDS |
Tag on pcDNA3.1+/C-(K)DYK | C terminal DYKDDDDK tags | |
ORF Insert Method | CloneEZ™ Seamless cloning technology | |
Insert Structure | linear | |
Update Date | 2017-09-30 | |
Organism | Homo sapiens(human) | |
Product | RNA pseudouridylate synthase domain-containing protein 1 isoform 1 | |
Comment | Comment: VALIDATED REFSEQ: This record has undergone validation or preliminary review. The reference sequence was derived from BG686882.1, BM763460.1, BC011783.2 and CB529100.1. This sequence is a reference standard in the RefSeqGene project. On Jan 23, 2004 this sequence version replaced NM_058192.1. ##Evidence-Data-START## Transcript exon combination :: BX444774.2, SRR1163658.337473.1 [ECO:0000332] RNAseq introns :: single sample supports all introns SAMEA2145743, SAMEA2154125 [ECO:0000348] ##Evidence-Data-END## COMPLETENESS: complete on the 3' end. |
1 | ATGGAGCCAG GCAGCGTGGA GAACCTGTCC ATCGTGTACC GGAGCCGCGA CTTCCTGGTG |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
RefSeq | NP_478072.1 |
CDS | 136..1074 |
Translation |
Target ORF information:
Target ORF information:
|
NM_058192.2 |
1 | ATGGAGCCAG GCAGCGTGGA GAACCTGTCC ATCGTGTACC GGAGCCGCGA CTTCCTGGTG |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
CloneID | OHu100342 | |
Clone ID Related Accession (Same CDS sequence) | NM_001324415.1 , NM_001324412.2 , NM_001324415.2 , NM_001369660.1 , NM_001324414.1 , NM_001324412.1 , NM_001324413.1 , NM_001324413.2 , NM_001324414.2 | |
Accession Version | NM_001324415.1 | Documents for ORF clone product in default vector |
Sequence Information | ORF Nucleotide Sequence (Length: 552bp) Protein sequence SNP |
|
Vector | pcDNA3.1-C-(k)DYK or customized vector | User Manual |
Clone information | Clone Map | MSDS |
Tag on pcDNA3.1+/C-(K)DYK | C terminal DYKDDDDK tags | |
ORF Insert Method | CloneEZ™ Seamless cloning technology | |
Insert Structure | linear | |
Update Date | 2018-09-13 | |
Organism | Homo sapiens(human) | |
Product | RNA pseudouridylate synthase domain-containing protein 1 isoform 5 | |
Comment | Comment: VALIDATED REFSEQ: This record has undergone validation or preliminary review. The reference sequence was derived from AL031033.5 and CX786721.1. Transcript Variant: This variant (8), as well as variants 5, 6, and 7, encodes isoform 5. Sequence Note: This RefSeq record was created from transcript and genomic sequence data to make the sequence consistent with the reference genome assembly. The genomic coordinates used for the transcript record were based on transcript alignments. ##Evidence-Data-START## Transcript exon combination :: CX786721.1 [ECO:0000332] RNAseq introns :: single sample supports all introns SAMEA2145245, SAMEA2145743 [ECO:0000348] ##Evidence-Data-END## COMPLETENESS: complete on the 3' end. |
1 | ATGTGCATCG AGGGCTCGCA GGGTTGTGAG AACCCAAAGC CAAGCCTCAC AGATCTCGTG |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
RefSeq | NP_001311344.1 |
CDS | 533..1084 |
Translation |
Target ORF information:
Target ORF information:
|
NM_001324415.1 |
1 | ATGTGCATCG AGGGCTCGCA GGGTTGTGAG AACCCAAAGC CAAGCCTCAC AGATCTCGTG |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
CloneID | OHu100342 | |
Clone ID Related Accession (Same CDS sequence) | NM_001324415.1 , NM_001324412.2 , NM_001324415.2 , NM_001369660.1 , NM_001324414.1 , NM_001324412.1 , NM_001324413.1 , NM_001324413.2 , NM_001324414.2 | |
Accession Version | NM_001324412.2 Latest version! | Documents for ORF clone product in default vector |
Sequence Information | ORF Nucleotide Sequence (Length: 552bp) Protein sequence SNP |
|
Vector | pcDNA3.1-C-(k)DYK or customized vector | User Manual |
Clone information | Clone Map | MSDS |
Tag on pcDNA3.1+/C-(K)DYK | C terminal DYKDDDDK tags | |
ORF Insert Method | CloneEZ™ Seamless cloning technology | |
Insert Structure | linear | |
Update Date | 2019-05-30 | |
Organism | Homo sapiens(human) | |
Product | RNA pseudouridylate synthase domain-containing protein 1 isoform 5 | |
Comment | Comment: VALIDATED REFSEQ: This record has undergone validation or preliminary review. The reference sequence was derived from AL031033.5 and BX358716.2. On May 31, 2019 this sequence version replaced NM_001324412.1. Transcript Variant: This variant (5), as well as variants 6, 7, and 8, encodes isoform 5. Sequence Note: This RefSeq record was created from transcript and genomic sequence data to make the sequence consistent with the reference genome assembly. The genomic coordinates used for the transcript record were based on transcript alignments. ##Evidence-Data-START## Transcript exon combination :: SRR3476690.694829.1, SRR3476690.1044849.1 [ECO:0000332] RNAseq introns :: single sample supports all introns SAMEA2154125 [ECO:0000348] ##Evidence-Data-END## COMPLETENESS: complete on the 3' end. |
1 | ATGTGCATCG AGGGCTCGCA GGGTTGTGAG AACCCAAAGC CAAGCCTCAC AGATCTCGTG |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
RefSeq | NP_001311341.1 |
CDS | 332..883 |
Translation |
Target ORF information:
Target ORF information:
|
NM_001324412.2 |
1 | ATGTGCATCG AGGGCTCGCA GGGTTGTGAG AACCCAAAGC CAAGCCTCAC AGATCTCGTG |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
CloneID | OHu100342 | |
Clone ID Related Accession (Same CDS sequence) | NM_001324415.1 , NM_001324412.2 , NM_001324415.2 , NM_001369660.1 , NM_001324414.1 , NM_001324412.1 , NM_001324413.1 , NM_001324413.2 , NM_001324414.2 | |
Accession Version | NM_001324415.2 Latest version! | Documents for ORF clone product in default vector |
Sequence Information | ORF Nucleotide Sequence (Length: 552bp) Protein sequence SNP |
|
Vector | pcDNA3.1-C-(k)DYK or customized vector | User Manual |
Clone information | Clone Map | MSDS |
Tag on pcDNA3.1+/C-(K)DYK | C terminal DYKDDDDK tags | |
ORF Insert Method | CloneEZ™ Seamless cloning technology | |
Insert Structure | linear | |
Update Date | 2019-05-31 | |
Organism | Homo sapiens(human) | |
Product | RNA pseudouridylate synthase domain-containing protein 1 isoform 5 | |
Comment | Comment: VALIDATED REFSEQ: This record has undergone validation or preliminary review. The reference sequence was derived from AL031033.5 and CX786721.1. On Jun 1, 2019 this sequence version replaced NM_001324415.1. Transcript Variant: This variant (8), as well as variants 5, 6, and 7, encodes isoform 5. Sequence Note: This RefSeq record was created from transcript and genomic sequence data to make the sequence consistent with the reference genome assembly. The genomic coordinates used for the transcript record were based on transcript alignments. ##Evidence-Data-START## Transcript exon combination :: CX786721.1 [ECO:0000332] RNAseq introns :: single sample supports all introns SAMEA2145245, SAMEA2145743 [ECO:0000348] ##Evidence-Data-END## COMPLETENESS: complete on the 3' end. |
1 | ATGTGCATCG AGGGCTCGCA GGGTTGTGAG AACCCAAAGC CAAGCCTCAC AGATCTCGTG |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
RefSeq | NP_001311344.1 |
CDS | 531..1082 |
Translation |
Target ORF information:
Target ORF information:
|
NM_001324415.2 |
1 | ATGTGCATCG AGGGCTCGCA GGGTTGTGAG AACCCAAAGC CAAGCCTCAC AGATCTCGTG |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
CloneID | OHu100342 | |
Clone ID Related Accession (Same CDS sequence) | NM_001324415.1 , NM_001324412.2 , NM_001324415.2 , NM_001369660.1 , NM_001324414.1 , NM_001324412.1 , NM_001324413.1 , NM_001324413.2 , NM_001324414.2 | |
Accession Version | NM_001369660.1 Latest version! | Documents for ORF clone product in default vector |
Sequence Information | ORF Nucleotide Sequence (Length: 552bp) Protein sequence SNP |
|
Vector | pcDNA3.1-C-(k)DYK or customized vector | User Manual |
Clone information | Clone Map | MSDS |
Tag on pcDNA3.1+/C-(K)DYK | C terminal DYKDDDDK tags | |
ORF Insert Method | CloneEZ™ Seamless cloning technology | |
Insert Structure | linear | |
Update Date | 2019-09-26 | |
Organism | Homo sapiens(human) | |
Product | RNA pseudouridylate synthase domain-containing protein 1 isoform 5 | |
Comment | Comment: VALIDATED REFSEQ: This record has undergone validation or preliminary review. The reference sequence was derived from AL031033.5. Sequence Note: The RefSeq transcript and protein were derived from genomic sequence to make the sequence consistent with the reference genome assembly. The genomic coordinates used for the transcript record were based on alignments. ##Evidence-Data-START## Transcript exon combination :: SRR3476690.20494.1 [ECO:0000332] RNAseq introns :: single sample supports all introns SAMEA2152474, SAMEA2159764 [ECO:0000348] ##Evidence-Data-END## |
1 | ATGTGCATCG AGGGCTCGCA GGGTTGTGAG AACCCAAAGC CAAGCCTCAC AGATCTCGTG |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
RefSeq | NP_001356589.1 |
CDS | 583..1134 |
Translation |
Target ORF information:
Target ORF information:
|
NM_001369660.1 |
1 | ATGTGCATCG AGGGCTCGCA GGGTTGTGAG AACCCAAAGC CAAGCCTCAC AGATCTCGTG |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
CloneID | OHu100342 | |
Clone ID Related Accession (Same CDS sequence) | NM_001324415.1 , NM_001324412.2 , NM_001324415.2 , NM_001369660.1 , NM_001324414.1 , NM_001324412.1 , NM_001324413.1 , NM_001324413.2 , NM_001324414.2 | |
Accession Version | NM_001324414.1 | Documents for ORF clone product in default vector |
Sequence Information | ORF Nucleotide Sequence (Length: 552bp) Protein sequence SNP |
|
Vector | pcDNA3.1-C-(k)DYK or customized vector | User Manual |
Clone information | Clone Map | MSDS |
Tag on pcDNA3.1+/C-(K)DYK | C terminal DYKDDDDK tags | |
ORF Insert Method | CloneEZ™ Seamless cloning technology | |
Insert Structure | linear | |
Update Date | 2018-09-13 | |
Organism | Homo sapiens(human) | |
Product | RNA pseudouridylate synthase domain-containing protein 1 isoform 5 | |
Comment | Comment: VALIDATED REFSEQ: This record has undergone validation or preliminary review. The reference sequence was derived from AL031033.5 and CN311777.1. Transcript Variant: This variant (7), as well as variants 5, 6, and 8, encodes isoform 5. Sequence Note: This RefSeq record was created from transcript and genomic sequence data to make the sequence consistent with the reference genome assembly. The genomic coordinates used for the transcript record were based on transcript alignments. ##Evidence-Data-START## CDS exon combination :: SRR1163657.567446.1, SRR1163658.206558.1 [ECO:0000331] RNAseq introns :: single sample supports all introns SAMEA1965299, SAMEA2142853 [ECO:0000348] ##Evidence-Data-END## COMPLETENESS: complete on the 3' end. |
1 | ATGTGCATCG AGGGCTCGCA GGGTTGTGAG AACCCAAAGC CAAGCCTCAC AGATCTCGTG |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
RefSeq | NP_001311343.1 |
CDS | 480..1031 |
Translation |
Target ORF information:
Target ORF information:
|
NM_001324414.1 |
1 | ATGTGCATCG AGGGCTCGCA GGGTTGTGAG AACCCAAAGC CAAGCCTCAC AGATCTCGTG |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
CloneID | OHu100342 | |
Clone ID Related Accession (Same CDS sequence) | NM_001324415.1 , NM_001324412.2 , NM_001324415.2 , NM_001369660.1 , NM_001324414.1 , NM_001324412.1 , NM_001324413.1 , NM_001324413.2 , NM_001324414.2 | |
Accession Version | NM_001324412.1 | Documents for ORF clone product in default vector |
Sequence Information | ORF Nucleotide Sequence (Length: 552bp) Protein sequence SNP |
|
Vector | pcDNA3.1-C-(k)DYK or customized vector | User Manual |
Clone information | Clone Map | MSDS |
Tag on pcDNA3.1+/C-(K)DYK | C terminal DYKDDDDK tags | |
ORF Insert Method | CloneEZ™ Seamless cloning technology | |
Insert Structure | linear | |
Update Date | 2018-09-13 | |
Organism | Homo sapiens(human) | |
Product | RNA pseudouridylate synthase domain-containing protein 1 isoform 5 | |
Comment | Comment: VALIDATED REFSEQ: This record has undergone validation or preliminary review. The reference sequence was derived from AL031033.5 and BX358716.2. Transcript Variant: This variant (5), as well as variants 6, 7, and 8, encodes isoform 5. Sequence Note: This RefSeq record was created from transcript and genomic sequence data to make the sequence consistent with the reference genome assembly. The genomic coordinates used for the transcript record were based on transcript alignments. ##Evidence-Data-START## Transcript exon combination :: BM544552.1, BX358716.2 [ECO:0000332] RNAseq introns :: single sample supports all introns SAMEA2154125 [ECO:0000348] ##Evidence-Data-END## COMPLETENESS: complete on the 3' end. |
1 | ATGTGCATCG AGGGCTCGCA GGGTTGTGAG AACCCAAAGC CAAGCCTCAC AGATCTCGTG |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
RefSeq | NP_001311341.1 |
CDS | 334..885 |
Translation |
Target ORF information:
Target ORF information:
|
NM_001324412.1 |
1 | ATGTGCATCG AGGGCTCGCA GGGTTGTGAG AACCCAAAGC CAAGCCTCAC AGATCTCGTG |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
CloneID | OHu100342 | |
Clone ID Related Accession (Same CDS sequence) | NM_001324415.1 , NM_001324412.2 , NM_001324415.2 , NM_001369660.1 , NM_001324414.1 , NM_001324412.1 , NM_001324413.1 , NM_001324413.2 , NM_001324414.2 | |
Accession Version | NM_001324413.1 | Documents for ORF clone product in default vector |
Sequence Information | ORF Nucleotide Sequence (Length: 552bp) Protein sequence SNP |
|
Vector | pcDNA3.1-C-(k)DYK or customized vector | User Manual |
Clone information | Clone Map | MSDS |
Tag on pcDNA3.1+/C-(K)DYK | C terminal DYKDDDDK tags | |
ORF Insert Method | CloneEZ™ Seamless cloning technology | |
Insert Structure | linear | |
Update Date | 2018-09-13 | |
Organism | Homo sapiens(human) | |
Product | RNA pseudouridylate synthase domain-containing protein 1 isoform 5 | |
Comment | Comment: VALIDATED REFSEQ: This record has undergone validation or preliminary review. The reference sequence was derived from AL031033.5 and CN311779.1. Transcript Variant: This variant (6), as well as variants 5, 7, and 8, encodes isoform 5. Sequence Note: This RefSeq record was created from transcript and genomic sequence data to make the sequence consistent with the reference genome assembly. The genomic coordinates used for the transcript record were based on transcript alignments. ##Evidence-Data-START## Transcript exon combination :: SRR1163658.496681.1, SRR1163657.572195.1 [ECO:0000332] RNAseq introns :: mixed/partial sample support SAMEA1965299, SAMEA1966682 [ECO:0000350] ##Evidence-Data-END## COMPLETENESS: complete on the 3' end. |
1 | ATGTGCATCG AGGGCTCGCA GGGTTGTGAG AACCCAAAGC CAAGCCTCAC AGATCTCGTG |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
RefSeq | NP_001311342.1 |
CDS | 424..975 |
Translation |
Target ORF information:
Target ORF information:
|
NM_001324413.1 |
1 | ATGTGCATCG AGGGCTCGCA GGGTTGTGAG AACCCAAAGC CAAGCCTCAC AGATCTCGTG |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
CloneID | OHu100342 | |
Clone ID Related Accession (Same CDS sequence) | NM_001324415.1 , NM_001324412.2 , NM_001324415.2 , NM_001369660.1 , NM_001324414.1 , NM_001324412.1 , NM_001324413.1 , NM_001324413.2 , NM_001324414.2 | |
Accession Version | NM_001324413.2 Latest version! | Documents for ORF clone product in default vector |
Sequence Information | ORF Nucleotide Sequence (Length: 552bp) Protein sequence SNP |
|
Vector | pcDNA3.1-C-(k)DYK or customized vector | User Manual |
Clone information | Clone Map | MSDS |
Tag on pcDNA3.1+/C-(K)DYK | C terminal DYKDDDDK tags | |
ORF Insert Method | CloneEZ™ Seamless cloning technology | |
Insert Structure | linear | |
Update Date | 2019-05-30 | |
Organism | Homo sapiens(human) | |
Product | RNA pseudouridylate synthase domain-containing protein 1 isoform 5 | |
Comment | Comment: VALIDATED REFSEQ: This record has undergone validation or preliminary review. The reference sequence was derived from AL031033.5 and CN311779.1. On May 31, 2019 this sequence version replaced NM_001324413.1. Transcript Variant: This variant (6), as well as variants 5, 7, and 8, encodes isoform 5. Sequence Note: This RefSeq record was created from transcript and genomic sequence data to make the sequence consistent with the reference genome assembly. The genomic coordinates used for the transcript record were based on transcript alignments. ##Evidence-Data-START## Transcript exon combination :: SRR3476690.640591.1, SRR3476690.1095475.1 [ECO:0000332] RNAseq introns :: mixed/partial sample support SAMEA1965299, SAMEA1966682 [ECO:0000350] ##Evidence-Data-END## COMPLETENESS: complete on the 3' end. |
1 | ATGTGCATCG AGGGCTCGCA GGGTTGTGAG AACCCAAAGC CAAGCCTCAC AGATCTCGTG |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
RefSeq | NP_001311342.1 |
CDS | 422..973 |
Translation |
Target ORF information:
Target ORF information:
|
NM_001324413.2 |
1 | ATGTGCATCG AGGGCTCGCA GGGTTGTGAG AACCCAAAGC CAAGCCTCAC AGATCTCGTG |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
CloneID | OHu100342 | |
Clone ID Related Accession (Same CDS sequence) | NM_001324415.1 , NM_001324412.2 , NM_001324415.2 , NM_001369660.1 , NM_001324414.1 , NM_001324412.1 , NM_001324413.1 , NM_001324413.2 , NM_001324414.2 | |
Accession Version | NM_001324414.2 Latest version! | Documents for ORF clone product in default vector |
Sequence Information | ORF Nucleotide Sequence (Length: 552bp) Protein sequence SNP |
|
Vector | pcDNA3.1-C-(k)DYK or customized vector | User Manual |
Clone information | Clone Map | MSDS |
Tag on pcDNA3.1+/C-(K)DYK | C terminal DYKDDDDK tags | |
ORF Insert Method | CloneEZ™ Seamless cloning technology | |
Insert Structure | linear | |
Update Date | 2019-05-30 | |
Organism | Homo sapiens(human) | |
Product | RNA pseudouridylate synthase domain-containing protein 1 isoform 5 | |
Comment | Comment: VALIDATED REFSEQ: This record has undergone validation or preliminary review. The reference sequence was derived from AL031033.5 and CN311777.1. On May 31, 2019 this sequence version replaced NM_001324414.1. Transcript Variant: This variant (7), as well as variants 5, 6, and 8, encodes isoform 5. Sequence Note: This RefSeq record was created from transcript and genomic sequence data to make the sequence consistent with the reference genome assembly. The genomic coordinates used for the transcript record were based on transcript alignments. ##Evidence-Data-START## CDS exon combination :: BC036279.2, SRR3476690.293186.1 [ECO:0000331] RNAseq introns :: single sample supports all introns SAMEA1965299, SAMEA2142853 [ECO:0000348] ##Evidence-Data-END## COMPLETENESS: complete on the 3' end. |
1 | ATGTGCATCG AGGGCTCGCA GGGTTGTGAG AACCCAAAGC CAAGCCTCAC AGATCTCGTG |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
RefSeq | NP_001311343.1 |
CDS | 478..1029 |
Translation |
Target ORF information:
Target ORF information:
|
NM_001324414.2 |
1 | ATGTGCATCG AGGGCTCGCA GGGTTGTGAG AACCCAAAGC CAAGCCTCAC AGATCTCGTG |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
CloneID | OHu74673 | |
Clone ID Related Accession (Same CDS sequence) | NM_001324086.1 , NM_001324086.2 | |
Accession Version | NM_001324086.1 | Documents for ORF clone product in default vector |
Sequence Information | ORF Nucleotide Sequence (Length: 948bp) Protein sequence SNP |
|
Vector | pcDNA3.1-C-(k)DYK or customized vector | User Manual |
Clone information | Clone Map | MSDS |
Tag on pcDNA3.1+/C-(K)DYK | C terminal DYKDDDDK tags | |
ORF Insert Method | CloneEZ™ Seamless cloning technology | |
Insert Structure | linear | |
Update Date | 2018-12-04 | |
Organism | Homo sapiens(human) | |
Product | RNA pseudouridylate synthase domain-containing protein 1 isoform 2 | |
Comment | Comment: VALIDATED REFSEQ: This record has undergone validation or preliminary review. The reference sequence was derived from AL031033.5. On Apr 26, 2016 this sequence version replaced XM_011522352.1. Sequence Note: The RefSeq transcript and protein were derived from genomic sequence to make the sequence consistent with the reference genome assembly. The genomic coordinates used for the transcript record were based on alignments. ##Evidence-Data-START## Transcript exon combination :: SRR3476690.165963.1, SRR1163655.228612.1 [ECO:0000332] RNAseq introns :: single sample supports all introns SAMEA2145743, SAMEA2154125 [ECO:0000348] ##Evidence-Data-END## COMPLETENESS: complete on the 3' end. |
1 | ATGGAGCCAG GCAGCGTGGA GAACCTGTCC ATCGTGTACC GGAGCCGCGA CTTCCTGGTG |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
RefSeq | NP_001311015.1 |
CDS | 136..1083 |
Translation |
Target ORF information:
Target ORF information:
|
NM_001324086.1 |
1 | ATGGAGCCAG GCAGCGTGGA GAACCTGTCC ATCGTGTACC GGAGCCGCGA CTTCCTGGTG |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
CloneID | OHu74673 | |
Clone ID Related Accession (Same CDS sequence) | NM_001324086.1 , NM_001324086.2 | |
Accession Version | NM_001324086.2 Latest version! | Documents for ORF clone product in default vector |
Sequence Information | ORF Nucleotide Sequence (Length: 948bp) Protein sequence SNP |
|
Vector | pcDNA3.1-C-(k)DYK or customized vector | User Manual |
Clone information | Clone Map | MSDS |
Tag on pcDNA3.1+/C-(K)DYK | C terminal DYKDDDDK tags | |
ORF Insert Method | CloneEZ™ Seamless cloning technology | |
Insert Structure | linear | |
Update Date | 2019-05-30 | |
Organism | Homo sapiens(human) | |
Product | RNA pseudouridylate synthase domain-containing protein 1 isoform 2 | |
Comment | Comment: VALIDATED REFSEQ: This record has undergone validation or preliminary review. The reference sequence was derived from AL031033.5. On May 31, 2019 this sequence version replaced NM_001324086.1. Sequence Note: The RefSeq transcript and protein were derived from genomic sequence to make the sequence consistent with the reference genome assembly. The genomic coordinates used for the transcript record were based on alignments. ##Evidence-Data-START## Transcript exon combination :: SRR3476690.165963.1, SRR1163655.228612.1 [ECO:0000332] RNAseq introns :: single sample supports all introns SAMEA2145743, SAMEA2154125 [ECO:0000348] ##Evidence-Data-END## COMPLETENESS: complete on the 3' end. |
1 | ATGGAGCCAG GCAGCGTGGA GAACCTGTCC ATCGTGTACC GGAGCCGCGA CTTCCTGGTG |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
RefSeq | NP_001311015.1 |
CDS | 134..1081 |
Translation |
Target ORF information:
Target ORF information:
|
NM_001324086.2 |
1 | ATGGAGCCAG GCAGCGTGGA GAACCTGTCC ATCGTGTACC GGAGCCGCGA CTTCCTGGTG |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
CloneID | OHu100320 | |
Clone ID Related Accession (Same CDS sequence) | NM_001324411.1 , XM_024450144.1 , NM_001324411.2 | |
Accession Version | NM_001324411.1 | Documents for ORF clone product in default vector |
Sequence Information | ORF Nucleotide Sequence (Length: 396bp) Protein sequence SNP |
|
Vector | pcDNA3.1-C-(k)DYK or customized vector | User Manual |
Clone information | Clone Map | MSDS |
Tag on pcDNA3.1+/C-(K)DYK | C terminal DYKDDDDK tags | |
ORF Insert Method | CloneEZ™ Seamless cloning technology | |
Insert Structure | linear | |
Update Date | 2018-09-13 | |
Organism | Homo sapiens(human) | |
Product | RNA pseudouridylate synthase domain-containing protein 1 isoform 4 | |
Comment | Comment: VALIDATED REFSEQ: This record has undergone validation or preliminary review. The reference sequence was derived from AL031033.5 and AL520203.3. Sequence Note: This RefSeq record was created from transcript and genomic sequence data to make the sequence consistent with the reference genome assembly. The genomic coordinates used for the transcript record were based on transcript alignments. ##Evidence-Data-START## Transcript exon combination :: SRR1163658.38680.1, BX360870.2 [ECO:0000332] RNAseq introns :: single sample supports all introns SAMEA1965299, SAMEA2148093 [ECO:0000348] ##Evidence-Data-END## COMPLETENESS: complete on the 3' end. |
1 | ATGGAGCCAG GCAGCGTGGA GAACCTGTCC ATCGTGTACC GGAGCCGCGA CTTCCTGGTG |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
RefSeq | NP_001311340.1 |
CDS | 136..531 |
Translation |
Target ORF information:
Target ORF information:
|
NM_001324411.1 |
1 | ATGGAGCCAG GCAGCGTGGA GAACCTGTCC ATCGTGTACC GGAGCCGCGA CTTCCTGGTG |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
CloneID | OHu100320 | |
Clone ID Related Accession (Same CDS sequence) | NM_001324411.1 , XM_024450144.1 , NM_001324411.2 | |
Accession Version | NM_001324411.2 Latest version! | Documents for ORF clone product in default vector |
Sequence Information | ORF Nucleotide Sequence (Length: 396bp) Protein sequence SNP |
|
Vector | pcDNA3.1-C-(k)DYK or customized vector | User Manual |
Clone information | Clone Map | MSDS |
Tag on pcDNA3.1+/C-(K)DYK | C terminal DYKDDDDK tags | |
ORF Insert Method | CloneEZ™ Seamless cloning technology | |
Insert Structure | linear | |
Update Date | 2019-05-30 | |
Organism | Homo sapiens(human) | |
Product | RNA pseudouridylate synthase domain-containing protein 1 isoform 4 | |
Comment | Comment: VALIDATED REFSEQ: This record has undergone validation or preliminary review. The reference sequence was derived from AL031033.5 and AL520203.3. On May 31, 2019 this sequence version replaced NM_001324411.1. Sequence Note: This RefSeq record was created from transcript and genomic sequence data to make the sequence consistent with the reference genome assembly. The genomic coordinates used for the transcript record were based on transcript alignments. ##Evidence-Data-START## Transcript exon combination :: SRR1163658.38680.1, SRR3476690.693753.1 [ECO:0000332] RNAseq introns :: single sample supports all introns SAMEA1965299, SAMEA2148093 [ECO:0000348] ##Evidence-Data-END## COMPLETENESS: complete on the 3' end. |
1 | ATGGAGCCAG GCAGCGTGGA GAACCTGTCC ATCGTGTACC GGAGCCGCGA CTTCCTGGTG |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
RefSeq | NP_001311340.1 |
CDS | 134..529 |
Translation |
Target ORF information:
Target ORF information:
|
NM_001324411.2 |
1 | ATGGAGCCAG GCAGCGTGGA GAACCTGTCC ATCGTGTACC GGAGCCGCGA CTTCCTGGTG |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
CloneID | OHu108018 | |
Clone ID Related Accession (Same CDS sequence) | NM_001369658.1 | |
Accession Version | NM_001369658.1 Latest version! | Documents for ORF clone product in default vector |
Sequence Information | ORF Nucleotide Sequence (Length: 891bp) Protein sequence SNP |
|
Vector | pcDNA3.1-C-(k)DYK or customized vector | User Manual |
Clone information | Clone Map | MSDS |
Tag on pcDNA3.1+/C-(K)DYK | C terminal DYKDDDDK tags | |
ORF Insert Method | CloneEZ™ Seamless cloning technology | |
Insert Structure | linear | |
Update Date | 2019-09-26 | |
Organism | Homo sapiens(human) | |
Product | RNA pseudouridylate synthase domain-containing protein 1 isoform 6 | |
Comment | Comment: VALIDATED REFSEQ: This record has undergone validation or preliminary review. The reference sequence was derived from AL031033.5. Sequence Note: The RefSeq transcript and protein were derived from genomic sequence to make the sequence consistent with the reference genome assembly. The genomic coordinates used for the transcript record were based on alignments. ##Evidence-Data-START## Transcript exon combination :: DRR138518.32422.1 [ECO:0000332] RNAseq introns :: mixed/partial sample support SAMEA1965299, SAMEA1966682 [ECO:0000350] ##Evidence-Data-END## |
1 | ATGGAGCCAG GCAGCGTGGA GAACCTGTCC ATCGTGTACC GGAGCCGCGA CTTCCTGGTG |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
RefSeq | NP_001356587.1 |
CDS | 134..1024 |
Translation |
Target ORF information:
Target ORF information:
|
NM_001369658.1 |
1 | ATGGAGCCAG GCAGCGTGGA GAACCTGTCC ATCGTGTACC GGAGCCGCGA CTTCCTGGTG |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
CloneID | OHu82924 | |
Clone ID Related Accession (Same CDS sequence) | NM_001324410.1 , NM_001324410.2 , NM_001369659.1 | |
Accession Version | NM_001324410.1 | Documents for ORF clone product in default vector |
Sequence Information | ORF Nucleotide Sequence (Length: 561bp) Protein sequence SNP |
|
Vector | pcDNA3.1-C-(k)DYK or customized vector | User Manual |
Clone information | Clone Map | MSDS |
Tag on pcDNA3.1+/C-(K)DYK | C terminal DYKDDDDK tags | |
ORF Insert Method | CloneEZ™ Seamless cloning technology | |
Insert Structure | linear | |
Update Date | 2018-09-13 | |
Organism | Homo sapiens(human) | |
Product | RNA pseudouridylate synthase domain-containing protein 1 isoform 3 | |
Comment | Comment: VALIDATED REFSEQ: This record has undergone validation or preliminary review. The reference sequence was derived from AL031033.5 and AL514840.3. Sequence Note: This RefSeq record was created from transcript and genomic sequence data to make the sequence consistent with the reference genome assembly. The genomic coordinates used for the transcript record were based on transcript alignments. ##Evidence-Data-START## Transcript exon combination :: AL514840.3 [ECO:0000332] RNAseq introns :: mixed/partial sample support SAMEA1965299, SAMEA1966682 [ECO:0000350] ##Evidence-Data-END## COMPLETENESS: complete on the 3' end. |
1 | ATGTGCATCG AGGGCTCGCA GGGTGTGGCA GGTTGTGAGA ACCCAAAGCC AAGCCTCACA |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
RefSeq | NP_001311339.1 |
CDS | 424..984 |
Translation |
Target ORF information:
Target ORF information:
|
NM_001324410.1 |
1 | ATGTGCATCG AGGGCTCGCA GGGTGTGGCA GGTTGTGAGA ACCCAAAGCC AAGCCTCACA |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
CloneID | OHu82924 | |
Clone ID Related Accession (Same CDS sequence) | NM_001324410.1 , NM_001324410.2 , NM_001369659.1 | |
Accession Version | NM_001324410.2 Latest version! | Documents for ORF clone product in default vector |
Sequence Information | ORF Nucleotide Sequence (Length: 561bp) Protein sequence SNP |
|
Vector | pcDNA3.1-C-(k)DYK or customized vector | User Manual |
Clone information | Clone Map | MSDS |
Tag on pcDNA3.1+/C-(K)DYK | C terminal DYKDDDDK tags | |
ORF Insert Method | CloneEZ™ Seamless cloning technology | |
Insert Structure | linear | |
Update Date | 2019-05-30 | |
Organism | Homo sapiens(human) | |
Product | RNA pseudouridylate synthase domain-containing protein 1 isoform 3 | |
Comment | Comment: VALIDATED REFSEQ: This record has undergone validation or preliminary review. The reference sequence was derived from AL031033.5 and AL514840.3. On May 31, 2019 this sequence version replaced NM_001324410.1. Sequence Note: This RefSeq record was created from transcript and genomic sequence data to make the sequence consistent with the reference genome assembly. The genomic coordinates used for the transcript record were based on transcript alignments. ##Evidence-Data-START## Transcript exon combination :: SRR3476690.865111.1, AL514840.3 [ECO:0000332] RNAseq introns :: mixed/partial sample support SAMEA1965299, SAMEA1966682 [ECO:0000350] ##Evidence-Data-END## COMPLETENESS: complete on the 3' end. |
1 | ATGTGCATCG AGGGCTCGCA GGGTGTGGCA GGTTGTGAGA ACCCAAAGCC AAGCCTCACA |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
RefSeq | NP_001311339.1 |
CDS | 422..982 |
Translation |
Target ORF information:
Target ORF information:
|
NM_001324410.2 |
1 | ATGTGCATCG AGGGCTCGCA GGGTGTGGCA GGTTGTGAGA ACCCAAAGCC AAGCCTCACA |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
CloneID | OHu82924 | |
Clone ID Related Accession (Same CDS sequence) | NM_001324410.1 , NM_001324410.2 , NM_001369659.1 | |
Accession Version | NM_001369659.1 Latest version! | Documents for ORF clone product in default vector |
Sequence Information | ORF Nucleotide Sequence (Length: 561bp) Protein sequence SNP |
|
Vector | pcDNA3.1-C-(k)DYK or customized vector | User Manual |
Clone information | Clone Map | MSDS |
Tag on pcDNA3.1+/C-(K)DYK | C terminal DYKDDDDK tags | |
ORF Insert Method | CloneEZ™ Seamless cloning technology | |
Insert Structure | linear | |
Update Date | 2019-09-26 | |
Organism | Homo sapiens(human) | |
Product | RNA pseudouridylate synthase domain-containing protein 1 isoform 3 | |
Comment | Comment: VALIDATED REFSEQ: This record has undergone validation or preliminary review. The reference sequence was derived from AL031033.5. Sequence Note: The RefSeq transcript and protein were derived from genomic sequence to make the sequence consistent with the reference genome assembly. The genomic coordinates used for the transcript record were based on alignments. ##Evidence-Data-START## Transcript exon combination :: SRR3476690.928772.1, DRR138512.388158.1 [ECO:0000332] RNAseq introns :: single sample supports all introns SAMEA1965299, SAMEA2144120 [ECO:0000348] ##Evidence-Data-END## |
1 | ATGTGCATCG AGGGCTCGCA GGGTGTGGCA GGTTGTGAGA ACCCAAAGCC AAGCCTCACA |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
RefSeq | NP_001356588.1 |
CDS | 478..1038 |
Translation |
Target ORF information:
Target ORF information:
|
NM_001369659.1 |
1 | ATGTGCATCG AGGGCTCGCA GGGTGTGGCA GGTTGTGAGA ACCCAAAGCC AAGCCTCACA |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
CloneID | OHu100320 | |
Clone ID Related Accession (Same CDS sequence) | NM_001324411.1 , XM_024450144.1 , NM_001324411.2 | |
Accession Version | XM_024450144.1 Latest version! | Documents for ORF clone product in default vector |
Sequence Information | ORF Nucleotide Sequence (Length: 396bp) Protein sequence SNP |
|
Vector | pcDNA3.1-C-(k)DYK or customized vector | User Manual |
Clone information | Clone Map | MSDS |
Tag on pcDNA3.1+/C-(K)DYK | C terminal DYKDDDDK tags | |
ORF Insert Method | CloneEZ™ Seamless cloning technology | |
Insert Structure | linear | |
Update Date | 2019-12-05 | |
Organism | Homo sapiens(human) | |
Product | RNA pseudouridylate synthase domain-containing protein 1 isoform X1 | |
Comment | Comment: MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NC_000016.10) annotated using gene prediction method: Gnomon. Also see: Documentation of NCBI's Annotation Process ##Genome-Annotation-Data-START## Annotation Provider :: NCBI Annotation Status :: Updated annotation Annotation Name :: Homo sapiens Updated Annotation Release 109.20191205 Annotation Version :: 109.20191205 Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline Annotation Software Version :: 8.3 Annotation Method :: Best-placed RefSeq; propagated RefSeq model Features Annotated :: Gene; mRNA; CDS; ncRNA ##Genome-Annotation-Data-END## |
1 | ATGGAGCCAG GCAGCGTGGA GAACCTGTCC ATCGTGTACC GGAGCCGCGA CTTCCTGGTG |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
RefSeq | XP_024305912.1 |
CDS | 505..900 |
Translation |
Target ORF information:
Target ORF information:
|
XM_024450144.1 |
1 | ATGGAGCCAG GCAGCGTGGA GAACCTGTCC ATCGTGTACC GGAGCCGCGA CTTCCTGGTG |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
Transcriptome analysis of human gastric cancer. |
Sequence, structure and pathology of the fully annotated terminal 2 Mb of the short arm of human chromosome 16. |