Gene Symbol
PGLYRP2
Entrez Gene ID
114770
Full Name
peptidoglycan recognition protein 2
Synonyms
HMFT0141,PGLYRPL,PGRP-L,PGRPL,TAGL-like,tagL,tagL-alpha,tagl-beta
General protein information
Preferred Namespeptidoglycan recognition protein 2
NamesN-acetylmuramoyl-L-alanine amidase peptidoglycan recognition protein L peptidoglycan recognition protein long
Gene Type
protein-coding
Organism
Homo sapiens(human)
Genome
Chromosome: 19
Map Location: 19p13.12
Summary
This gene encodes a peptidoglycan recognition protein, which belongs to the N-acetylmuramoyl-L-alanine amidase 2 family. This protein hydrolyzes the link between N-acetylmuramoyl residues and L-amino acid residues in bacterial cell wall glycopeptides, and thus may play a scavenger role by digesting biologically active peptidoglycan into biologically inactive fragments. [provided by RefSeq, Sep 2011].
Disorder MIM:
608199
mRNA and Protein(s)
mRNA
Protein
Name
XM_006722633.3
XP_006722696.1
N-acetylmuramoyl-L-alanine amidase isoform X1
NM_052890.3
NP_443122.3
N-acetylmuramoyl-L-alanine amidase precursor
NM_052890.4
NP_443122.3
N-acetylmuramoyl-L-alanine amidase isoform 1 precursor
NM_001363546.1
NP_001350475.1
N-acetylmuramoyl-L-alanine amidase isoform 2 precursor
PGLYRP2
XP_001111934.2
Anopheles gambiae (African malaria mosquito)
PGRPLB
XP_003435776.1
Homo sapiens (human)
PGLYRP2
NP_443122.3
Pan troglodytes (chimpanzee)
PGLYRP2
XP_001172199.1
Mus musculus (house mouse)
Pglyrp2
NP_067294.2
Gallus gallus (chicken)
PGLYRP2
NP_001038151.1
Danio rerio (zebrafish)
pglyrp6
NP_001038687.1
Bos taurus (cattle)
PGLYRP2
XP_005208628.1
Danio rerio (zebrafish)
pglyrp2
NP_001038631.1
Canis lupus familiaris (dog)
PGLYRP2
XP_852999.3
Rattus norvegicus (Norway rat)
Pglyrp2
XP_006241155.1
Drosophila melanogaster (fruit fly)
PGRP-LB
NP_001247052.1
Xenopus tropicalis (tropical clawed frog)
pglyrp2
NP_001106487.2
Related articles in PubMed
A Novel Innate Response of Human Corneal Epithelium to Heat-killed Candida albicans by Producing Peptidoglycan Recognition Proteins.
Hua X, Yuan X, Li Z, Coursey TG, Pflugfelder SC, Li DQ PloS one10(6)e0128039(2015)
Peptidoglycan recognition protein genes and risk of Parkinson's disease.
Goldman SM, Kamel F, Ross GW, Jewell SA, Marras C, Hoppin JA, Umbach DM, Bhudhikanok GS, Meng C, Korell M, Comyns K, Hauser RA, Jankovic J, Factor SA, Bressman S, Lyons KE, Sandler DP, Langston JW, Tanner CM Movement disorders : official journal of the Movement Disorder Society29(9)1171-80(2014 Aug)
New genetic associations detected in a host response study to hepatitis B vaccine.
Davila S, Froeling FE, Tan A, Bonnard C, Boland GJ, Snippe H, Hibberd ML, Seielstad M Genes and immunity11(3)232-8(2010 Apr)
Gene variants associated with ischemic stroke: the cardiovascular health study.
Luke MM, O'Meara ES, Rowland CM, Shiffman D, Bare LA, Arellano AR, Longstreth WT Jr, Lumley T, Rice K, Tracy RP, Devlin JJ, Psaty BM Stroke40(2)363-8(2009 Feb)
GeneRIFs: Gene References Into Functions What's a GeneRIF?
The following PGLYRP2 gene cDNA ORF clone sequences were retrieved from the NCBI Reference Sequence Database (RefSeq). These sequences represent the protein coding region of the PGLYRP2 cDNA ORF which is encoded by the open reading frame (ORF) sequence. ORF sequences can be delivered in our standard vector, pcDNA3.1+ /C-(K)DYK or the vector of your choice as an expression/transfection-ready ORF clone. Not the clone you want? Click here to find your clone.
CloneID
OHu05555
Clone ID Related Accession (Same CDS sequence)
NM_052890.3
, NM_052890.4
Accession Version
NM_052890.3
Documents for ORF clone product in default vector
Sequence Information
ORF Nucleotide Sequence (Length: 1731bp)
Protein sequence
SNP
Vector
pcDNA3.1+ /C-(K)DYK or customized vector
User Manual
Clone information
Clone Map
MSDS
Tag on pcDNA3.1+ /C-(K)DYK
C terminal DYKDDDDK tags
ORF Insert Method
CloneEZ™ Seamless cloning technology
Insert Structure
linear
Update Date
2017-10-01
Organism
Homo sapiens(human)
Product
N-acetylmuramoyl-L-alanine amidase precursor
Comment
Comment: VALIDATED REFSEQ: This record has undergone validation or preliminary review. The reference sequence was derived from DB041324.1 and AF384856.1. On Aug 30, 2007 this sequence version replaced NM_052890.2.
Publication Note: This RefSeq record includes a subset of the publications that are available for this gene. Please see the Gene record to access additional publications.
##Evidence-Data-START##
Transcript exon combination :: AB073610.1, AK292292.1 [ECO:0000332]
RNAseq introns :: single sample supports all introns SAMEA2145122 [ECO:0000348]
##Evidence-Data-END##
COMPLETENESS: complete on the 3' end.
1 61 121 181 241 301 361 421 481 541 601 661 721 781 841 901 961 1021 1081 1141 1201 1261 1321 1381 1441 1501 1561 1621 1681 ATGGCCCAGG GTGTCCTCTG GATCCTACTC GGATTGCTAC TGTGGTCAGA CCCAGGGACA GCCTCCCTGC CCCTGCTCAT GGACTCTGTC ATCCAGGCCC TGGCTGAGCT GGAGCAGAAA GTGCCAGCTG CCAAGACCAG ACACACAGCT TCTGCGTGGC TGATGTCAGC TCCAAACTCT GGCCCCCACA ATCGCCTCTA CCACTTCCTG CTGGGGGCAT GGAGCCTCAA TGCTACAGAG TTGGATCCCT GCCCACTAAG CCCAGAGCTG TTAGGCCTGA CCAAGGAGGT GGCCCGACAT GACGTACGAG AAGGGAAGGA ATATGGGGTG GTGCTGGCAC CTGATGGCTC GACCGTGGCT GTGGAGCCTC TGCTGGCGGG GCTGGAGGCA GGGCTGCAAG GGCGCAGGGT CATAAATTTG CCCTTGGACA GCATGGCTGC CCCTTGGGAG ACTGGAGATA CCTTTCCAGA TGTTGTGGCC ATTGCTCCAG ATGTAAGAGC CACCTCCTCC CCAGGACTCA GGGATGGCTC TCCAGATGTC ACCACTGCAG ATATTGGAGC CAACACTCCA GATGCTACAA AAGGCTGTCC AGATGTCCAA GCTTCCTTGC CAGATGCCAA AGCCAAGTCC CCACCGACCA TGGTGGACAG CCTCCTGGCA GTCACCCTGG CTGGAAACCT GGGCCTGACC TTCCTCCGAG GTTCCCAGAC CCAGAGCCAT CCAGACCTGG GAACTGAGGG CTGCTGGGAC CAGCTCTCTG CCCCTCGGAC CTTTACGCTT TTGGACCCCA AGGCATCTCT GTTAACCATG GCCTTCCTCA ATGGCGCCCT GGATGGGGTC ATCCTTGGAG ACTACCTGAG CCGGACTCCT GAGCCCCGGC CATCCCTCAG CCACTTGCTG AGCCAGTACT ATGGGGCTGG GGTGGCCAGA GACCCAGGGT TCCGCAGCAA CTTCCGACGG CAGAACGGTG CTGCTCTGAC TTCAGCCTCC ATCCTGGCCC AGCAGGTGTG GGGAACCCTT GTCCTTCTAC AGAGGCTGGA GCCAGTACAC CTCCAGCTTC AGTGCATGAG CCAAGAACAG CTGGCCCAGG TGGCTGCCAA TGCTACCAAG GAATTCACTG AGGCCTTCCT GGGATGCCCG GCCATCCACC CCCGCTGCCG CTGGGGAGCG GCGCCTTATC GGGGCCGCCC GAAGCTGCTG CAGCTGCCGC TGGGATTCTT GTACGTGCAT CACACCTACG TGCCTGCACC ACCCTGCACG GACTTCACGC GCTGCGCAGC CAACATGCGC TCCATGCAGC GCTACCACCA GGACACGCAA GGCTGGGGAG ACATCGGCTA CAGTTTCGTG GTGGGCTCGG ACGGCTACGT GTACGAGGGA CGCGGCTGGC ACTGGGTGGG CGCCCACACG CTCGGCCACA ACTCCCGGGG CTTCGGCGTG GCCATAGTGG GCAACTACAC CGCGGCGCTG CCCACCGAGG CCGCTCTGCG CACGGTGCGC GACACGCTCC CGAGTTGTGC GGTGCGCGCC GGCCTCCTGC GGCCAGACTA CGCGCTGCTG GGCCACCGCC AGCTGGTGCG CACCGACTGC CCCGGCGACG CGCTCTTCGA CCTGCTGCGC ACCTGGCCGC ACTTCACCGC GACTGTTAAG CCAAGACCTG CCAGGAGTGT CTCTAAGAGA TCCAGGAGGG AGCCACCCCC AAGGACCCTG CCAGCCACAG ACCTCCAATA A
The stop codons will be deleted if pcDNA3.1+ /C-(K)DYK vector is selected.
RefSeq
NP_443122.3
CDS 134..1864
Translation
Target ORF information:
RefSeq Version NM_052890.3
Organism Homo sapiens(human)
Definition Homo sapiens peptidoglycan recognition protein 2 (PGLYRP2), mRNA.
Target ORF information:
Epitope DYKDDDDK
Bacterial selection AMPR
Mammalian selection NeoR
Vector pcDNA3.1+ /C-(K)DYK
NM_052890.3
ORF Insert Sequence:
1 61 121 181 241 301 361 421 481 541 601 661 721 781 841 901 961 1021 1081 1141 1201 1261 1321 1381 1441 1501 1561 1621 1681 ATGGCCCAGG GTGTCCTCTG GATCCTACTC GGATTGCTAC TGTGGTCAGA CCCAGGGACA GCCTCCCTGC CCCTGCTCAT GGACTCTGTC ATCCAGGCCC TGGCTGAGCT GGAGCAGAAA GTGCCAGCTG CCAAGACCAG ACACACAGCT TCTGCGTGGC TGATGTCAGC TCCAAACTCT GGCCCCCACA ATCGCCTCTA CCACTTCCTG CTGGGGGCAT GGAGCCTCAA TGCTACAGAG TTGGATCCCT GCCCACTAAG CCCAGAGCTG TTAGGCCTGA CCAAGGAGGT GGCCCGACAT GACGTACGAG AAGGGAAGGA ATATGGGGTG GTGCTGGCAC CTGATGGCTC GACCGTGGCT GTGGAGCCTC TGCTGGCGGG GCTGGAGGCA GGGCTGCAAG GGCGCAGGGT CATAAATTTG CCCTTGGACA GCATGGCTGC CCCTTGGGAG ACTGGAGATA CCTTTCCAGA TGTTGTGGCC ATTGCTCCAG ATGTAAGAGC CACCTCCTCC CCAGGACTCA GGGATGGCTC TCCAGATGTC ACCACTGCAG ATATTGGAGC CAACACTCCA GATGCTACAA AAGGCTGTCC AGATGTCCAA GCTTCCTTGC CAGATGCCAA AGCCAAGTCC CCACCGACCA TGGTGGACAG CCTCCTGGCA GTCACCCTGG CTGGAAACCT GGGCCTGACC TTCCTCCGAG GTTCCCAGAC CCAGAGCCAT CCAGACCTGG GAACTGAGGG CTGCTGGGAC CAGCTCTCTG CCCCTCGGAC CTTTACGCTT TTGGACCCCA AGGCATCTCT GTTAACCATG GCCTTCCTCA ATGGCGCCCT GGATGGGGTC ATCCTTGGAG ACTACCTGAG CCGGACTCCT GAGCCCCGGC CATCCCTCAG CCACTTGCTG AGCCAGTACT ATGGGGCTGG GGTGGCCAGA GACCCAGGGT TCCGCAGCAA CTTCCGACGG CAGAACGGTG CTGCTCTGAC TTCAGCCTCC ATCCTGGCCC AGCAGGTGTG GGGAACCCTT GTCCTTCTAC AGAGGCTGGA GCCAGTACAC CTCCAGCTTC AGTGCATGAG CCAAGAACAG CTGGCCCAGG TGGCTGCCAA TGCTACCAAG GAATTCACTG AGGCCTTCCT GGGATGCCCG GCCATCCACC CCCGCTGCCG CTGGGGAGCG GCGCCTTATC GGGGCCGCCC GAAGCTGCTG CAGCTGCCGC TGGGATTCTT GTACGTGCAT CACACCTACG TGCCTGCACC ACCCTGCACG GACTTCACGC GCTGCGCAGC CAACATGCGC TCCATGCAGC GCTACCACCA GGACACGCAA GGCTGGGGAG ACATCGGCTA CAGTTTCGTG GTGGGCTCGG ACGGCTACGT GTACGAGGGA CGCGGCTGGC ACTGGGTGGG CGCCCACACG CTCGGCCACA ACTCCCGGGG CTTCGGCGTG GCCATAGTGG GCAACTACAC CGCGGCGCTG CCCACCGAGG CCGCTCTGCG CACGGTGCGC GACACGCTCC CGAGTTGTGC GGTGCGCGCC GGCCTCCTGC GGCCAGACTA CGCGCTGCTG GGCCACCGCC AGCTGGTGCG CACCGACTGC CCCGGCGACG CGCTCTTCGA CCTGCTGCGC ACCTGGCCGC ACTTCACCGC GACTGTTAAG CCAAGACCTG CCAGGAGTGT CTCTAAGAGA TCCAGGAGGG AGCCACCCCC AAGGACCCTG CCAGCCACAG ACCTCCAATA A
The stop codons will be deleted if pcDNA3.1+ /C-(K)DYK vector is selected.
CloneID
OHu05555
Clone ID Related Accession (Same CDS sequence)
NM_052890.3
, NM_052890.4
Accession Version
NM_052890.4 Latest version!
Documents for ORF clone product in default vector
Sequence Information
ORF Nucleotide Sequence (Length: 1731bp)
Protein sequence
SNP
Vector
pcDNA3.1+ /C-(K)DYK or customized vector
User Manual
Clone information
Clone Map
MSDS
Tag on pcDNA3.1+ /C-(K)DYK
C terminal DYKDDDDK tags
ORF Insert Method
CloneEZ™ Seamless cloning technology
Insert Structure
linear
Update Date
2019-12-29
Organism
Homo sapiens(human)
Product
N-acetylmuramoyl-L-alanine amidase isoform 1 precursor
Comment
Comment: VALIDATED REFSEQ: This record has undergone validation or preliminary review. The reference sequence was derived from DB041324.1 and AF384856.1. On Nov 22, 2018 this sequence version replaced NM_052890.3.
Publication Note: This RefSeq record includes a subset of the publications that are available for this gene. Please see the Gene record to access additional publications.
##Evidence-Data-START##
Transcript exon combination :: AB073610.1, AK292292.1 [ECO:0000332]
RNAseq introns :: single sample supports all introns SAMEA2145122 [ECO:0000348]
##Evidence-Data-END##
##RefSeq-Attributes-START##
MANE Ensembl match :: ENST00000340880.5/ ENSP00000345968.4
RefSeq Select criteria :: based on conservation, expression
##RefSeq-Attributes-END##
COMPLETENESS: full length.
1 61 121 181 241 301 361 421 481 541 601 661 721 781 841 901 961 1021 1081 1141 1201 1261 1321 1381 1441 1501 1561 1621 1681 ATGGCCCAGG GTGTCCTCTG GATCCTACTC GGATTGCTAC TGTGGTCAGA CCCAGGGACA GCCTCCCTGC CCCTGCTCAT GGACTCTGTC ATCCAGGCCC TGGCTGAGCT GGAGCAGAAA GTGCCAGCTG CCAAGACCAG ACACACAGCT TCTGCGTGGC TGATGTCAGC TCCAAACTCT GGCCCCCACA ATCGCCTCTA CCACTTCCTG CTGGGGGCAT GGAGCCTCAA TGCTACAGAG TTGGATCCCT GCCCACTAAG CCCAGAGCTG TTAGGCCTGA CCAAGGAGGT GGCCCGACAT GACGTACGAG AAGGGAAGGA ATATGGGGTG GTGCTGGCAC CTGATGGCTC GACCGTGGCT GTGGAGCCTC TGCTGGCGGG GCTGGAGGCA GGGCTGCAAG GGCGCAGGGT CATAAATTTG CCCTTGGACA GCATGGCTGC CCCTTGGGAG ACTGGAGATA CCTTTCCAGA TGTTGTGGCC ATTGCTCCAG ATGTAAGAGC CACCTCCTCC CCAGGACTCA GGGATGGCTC TCCAGATGTC ACCACTGCAG ATATTGGAGC CAACACTCCA GATGCTACAA AAGGCTGTCC AGATGTCCAA GCTTCCTTGC CAGATGCCAA AGCCAAGTCC CCACCGACCA TGGTGGACAG CCTCCTGGCA GTCACCCTGG CTGGAAACCT GGGCCTGACC TTCCTCCGAG GTTCCCAGAC CCAGAGCCAT CCAGACCTGG GAACTGAGGG CTGCTGGGAC CAGCTCTCTG CCCCTCGGAC CTTTACGCTT TTGGACCCCA AGGCATCTCT GTTAACCATG GCCTTCCTCA ATGGCGCCCT GGATGGGGTC ATCCTTGGAG ACTACCTGAG CCGGACTCCT GAGCCCCGGC CATCCCTCAG CCACTTGCTG AGCCAGTACT ATGGGGCTGG GGTGGCCAGA GACCCAGGGT TCCGCAGCAA CTTCCGACGG CAGAACGGTG CTGCTCTGAC TTCAGCCTCC ATCCTGGCCC AGCAGGTGTG GGGAACCCTT GTCCTTCTAC AGAGGCTGGA GCCAGTACAC CTCCAGCTTC AGTGCATGAG CCAAGAACAG CTGGCCCAGG TGGCTGCCAA TGCTACCAAG GAATTCACTG AGGCCTTCCT GGGATGCCCG GCCATCCACC CCCGCTGCCG CTGGGGAGCG GCGCCTTATC GGGGCCGCCC GAAGCTGCTG CAGCTGCCGC TGGGATTCTT GTACGTGCAT CACACCTACG TGCCTGCACC ACCCTGCACG GACTTCACGC GCTGCGCAGC CAACATGCGC TCCATGCAGC GCTACCACCA GGACACGCAA GGCTGGGGAG ACATCGGCTA CAGTTTCGTG GTGGGCTCGG ACGGCTACGT GTACGAGGGA CGCGGCTGGC ACTGGGTGGG CGCCCACACG CTCGGCCACA ACTCCCGGGG CTTCGGCGTG GCCATAGTGG GCAACTACAC CGCGGCGCTG CCCACCGAGG CCGCTCTGCG CACGGTGCGC GACACGCTCC CGAGTTGTGC GGTGCGCGCC GGCCTCCTGC GGCCAGACTA CGCGCTGCTG GGCCACCGCC AGCTGGTGCG CACCGACTGC CCCGGCGACG CGCTCTTCGA CCTGCTGCGC ACCTGGCCGC ACTTCACCGC GACTGTTAAG CCAAGACCTG CCAGGAGTGT CTCTAAGAGA TCCAGGAGGG AGCCACCCCC AAGGACCCTG CCAGCCACAG ACCTCCAATA A
The stop codons will be deleted if pcDNA3.1+ /C-(K)DYK vector is selected.
RefSeq
NP_443122.3
CDS 131..1861
Translation
Target ORF information:
RefSeq Version NM_052890.4
Organism Homo sapiens(human)
Definition Homo sapiens peptidoglycan recognition protein 2 (PGLYRP2), transcript variant 1, mRNA.
Target ORF information:
Epitope DYKDDDDK
Bacterial selection AMPR
Mammalian selection NeoR
Vector pcDNA3.1+ /C-(K)DYK
NM_052890.4
ORF Insert Sequence:
1 61 121 181 241 301 361 421 481 541 601 661 721 781 841 901 961 1021 1081 1141 1201 1261 1321 1381 1441 1501 1561 1621 1681 ATGGCCCAGG GTGTCCTCTG GATCCTACTC GGATTGCTAC TGTGGTCAGA CCCAGGGACA GCCTCCCTGC CCCTGCTCAT GGACTCTGTC ATCCAGGCCC TGGCTGAGCT GGAGCAGAAA GTGCCAGCTG CCAAGACCAG ACACACAGCT TCTGCGTGGC TGATGTCAGC TCCAAACTCT GGCCCCCACA ATCGCCTCTA CCACTTCCTG CTGGGGGCAT GGAGCCTCAA TGCTACAGAG TTGGATCCCT GCCCACTAAG CCCAGAGCTG TTAGGCCTGA CCAAGGAGGT GGCCCGACAT GACGTACGAG AAGGGAAGGA ATATGGGGTG GTGCTGGCAC CTGATGGCTC GACCGTGGCT GTGGAGCCTC TGCTGGCGGG GCTGGAGGCA GGGCTGCAAG GGCGCAGGGT CATAAATTTG CCCTTGGACA GCATGGCTGC CCCTTGGGAG ACTGGAGATA CCTTTCCAGA TGTTGTGGCC ATTGCTCCAG ATGTAAGAGC CACCTCCTCC CCAGGACTCA GGGATGGCTC TCCAGATGTC ACCACTGCAG ATATTGGAGC CAACACTCCA GATGCTACAA AAGGCTGTCC AGATGTCCAA GCTTCCTTGC CAGATGCCAA AGCCAAGTCC CCACCGACCA TGGTGGACAG CCTCCTGGCA GTCACCCTGG CTGGAAACCT GGGCCTGACC TTCCTCCGAG GTTCCCAGAC CCAGAGCCAT CCAGACCTGG GAACTGAGGG CTGCTGGGAC CAGCTCTCTG CCCCTCGGAC CTTTACGCTT TTGGACCCCA AGGCATCTCT GTTAACCATG GCCTTCCTCA ATGGCGCCCT GGATGGGGTC ATCCTTGGAG ACTACCTGAG CCGGACTCCT GAGCCCCGGC CATCCCTCAG CCACTTGCTG AGCCAGTACT ATGGGGCTGG GGTGGCCAGA GACCCAGGGT TCCGCAGCAA CTTCCGACGG CAGAACGGTG CTGCTCTGAC TTCAGCCTCC ATCCTGGCCC AGCAGGTGTG GGGAACCCTT GTCCTTCTAC AGAGGCTGGA GCCAGTACAC CTCCAGCTTC AGTGCATGAG CCAAGAACAG CTGGCCCAGG TGGCTGCCAA TGCTACCAAG GAATTCACTG AGGCCTTCCT GGGATGCCCG GCCATCCACC CCCGCTGCCG CTGGGGAGCG GCGCCTTATC GGGGCCGCCC GAAGCTGCTG CAGCTGCCGC TGGGATTCTT GTACGTGCAT CACACCTACG TGCCTGCACC ACCCTGCACG GACTTCACGC GCTGCGCAGC CAACATGCGC TCCATGCAGC GCTACCACCA GGACACGCAA GGCTGGGGAG ACATCGGCTA CAGTTTCGTG GTGGGCTCGG ACGGCTACGT GTACGAGGGA CGCGGCTGGC ACTGGGTGGG CGCCCACACG CTCGGCCACA ACTCCCGGGG CTTCGGCGTG GCCATAGTGG GCAACTACAC CGCGGCGCTG CCCACCGAGG CCGCTCTGCG CACGGTGCGC GACACGCTCC CGAGTTGTGC GGTGCGCGCC GGCCTCCTGC GGCCAGACTA CGCGCTGCTG GGCCACCGCC AGCTGGTGCG CACCGACTGC CCCGGCGACG CGCTCTTCGA CCTGCTGCGC ACCTGGCCGC ACTTCACCGC GACTGTTAAG CCAAGACCTG CCAGGAGTGT CTCTAAGAGA TCCAGGAGGG AGCCACCCCC AAGGACCCTG CCAGCCACAG ACCTCCAATA A
The stop codons will be deleted if pcDNA3.1+ /C-(K)DYK vector is selected.
CloneID
OHu51409
Clone ID Related Accession (Same CDS sequence)
XM_006722633.3
, NM_001363546.1
Accession Version
NM_001363546.1 Latest version!
Documents for ORF clone product in default vector
Sequence Information
ORF Nucleotide Sequence (Length: 1905bp)
Protein sequence
SNP
Vector
pcDNA3.1+ /C-(K)DYK or customized vector
User Manual
Clone information
Clone Map
MSDS
Tag on pcDNA3.1+ /C-(K)DYK
C terminal DYKDDDDK tags
ORF Insert Method
CloneEZ™ Seamless cloning technology
Insert Structure
linear
Update Date
2019-12-29
Organism
Homo sapiens(human)
Product
N-acetylmuramoyl-L-alanine amidase isoform 2 precursor
Comment
Comment: VALIDATED REFSEQ: This record has undergone validation or preliminary review. The reference sequence was derived from AK055882.1, BC144238.1 and AY358156.1. On May 24, 2018 this sequence version replaced XM_006722633.3.
Publication Note: This RefSeq record includes a subset of the publications that are available for this gene. Please see the Gene record to access additional publications.
##Evidence-Data-START##
Transcript exon combination :: BC136551.1 [ECO:0000332]
##Evidence-Data-END##
1 61 121 181 241 301 361 421 481 541 601 661 721 781 841 901 961 1021 1081 1141 1201 1261 1321 1381 1441 1501 1561 1621 1681 1741 1801 1861 ATGGCCCAGG GTGTCCTCTG GATCCTACTC GGATTGCTAC TGTGGTCAGA CCCAGGGACA GCCTCCCTGC CCCTGCTCAT GGACTCTGTC ATCCAGGCCC TGGCTGAGCT GGAGCAGAAA GTGCCAGCTG CCAAGACCAG ACACACAGCT TCTGCGTGGC TGATGTCAGC TCCAAACTCT GGCCCCCACA ATCGCCTCTA CCACTTCCTG CTGGGGGCAT GGAGCCTCAA TGCTACAGAG TTGGATCCCT GCCCACTAAG CCCAGAGCTG TTAGGCCTGA CCAAGGAGGT GGCCCGACAT GACGTACGAG AAGGGAAGGA ATATGGGGTG GTGCTGGCAC CTGATGGCTC GACCGTGGCT GTGGAGCCTC TGCTGGCGGG GCTGGAGGCA GGGCTGCAAG GGCGCAGGGT CATAAATTTG CCCTTGGACA GCATGGCTGC CCCTTGGGAG ACTGGAGATA CCTTTCCAGA TGTTGTGGCC ATTGCTCCAG ATGTAAGAGC CACCTCCTCC CCAGGACTCA GGGATGGCTC TCCAGATGTC ACCACTGCAG ATATTGGAGC CAACACTCCA GATGCTACAA AAGGCTGTCC AGATGTCCAA GCTTCCTTGC CAGATGCCAA AGCCAAGTCC CCACCGACCA TGGTGGACAG CCTCCTGGCA GTCACCCTGG CTGGAAACCT GGGCCTGACC TTCCTCCGAG GTTCCCAGAC CCAGAGCCAT CCAGACCTGG GAACTGAGGG CTGCTGGGAC CAGCTCTCTG CCCCTCGGAC CTTTACGCTT TTGGACCCCA AGGCATCTCT GTTAACCATG GCCTTCCTCA ATGGCGCCCT GGATGGGGTC ATCCTTGGAG ACTACCTGAG CCGGACTCCT GAGCCCCGGC CATCCCTCAG CCACTTGCTG AGCCAGTACT ATGGGGCTGG GGTGGCCAGA GACCCAGGGT TCCGCAGCAA CTTCCGACGG CAGAACGGTG CTGCTCTGAC TTCAGCCTCC ATCCTGGCCC AGCAGGTGTG GGGAACCCTT GTCCTTCTAC AGAGGCTGGA GCCAGTACAC CTCCAGCTTC AGTGCATGAG CCAAGAACAG CTGGCCCAGG TGGCTGCCAA TGCTACCAAG GAATTCACTG AGGCCTTCCT GGGATGCCCG GCCATCCACC CCCGCTGCCG CTGGGGAGCG GCGCCTTATC GGGGCCGCCC GAAGCTGCTG CAGCTGCCGC TGGGATTCTT GTACGTGCAT CACACCTACG TGCCTGCACC ACCCTGCACG GACTTCACGC GCTGCGCAGC CAACATGCGC TCCATGCAGC GCTACCACCA GGACACGCAA GGCTGGGGAG ACATCGGCTA CAGTTTCGTG GTGGGCTCGG ACGGCTACGT GTACGAGGGA CGCGGCTGGC ACTGGGTGGG CGCCCACACG CTCGGCCACA ACTCCCGGGG CTTCGGCGTG GCCATAGTGG GCAACTACAC CGCGGCGCTG CCCACCGAGG CCGCTCTGCG CACGGTGCGC GACACGCTCC CGAGTTGTGC GGTGCGCGCC GGCCTCCTGC GGCCAGACTA CGCGCTGCTG GGCCACCGCC AGCTGGTGCG CACCGACTGC CCCGGCGACG CGCTCTTCGA CCTGCTGCGC ACCTGGCCGC ACTTCACCGC GGTGAGTCTT CGCAGCCTGC ACTACACGGC CCGCCGCCCC TCCGTCTACA CAAGCTCCAC GAGGCCCCTG CCCCCTGCCT GTAACAGCTG TGCCCGCACA GCCTCAGCCA GGCCCCCAAC TTCCCGGCGG CACGTCTATT CAGGAAACCT AGGCCCAGCC TTTGCGGGTC ACTCTGCGGG CAACATCCCT GATCCTGTGA CTTCTGCCTA TGCAGCCTCA GCTCAGCCCC AGACCCAGCC AGCCTGTCCT TTCCCCAGCT CCTAA
The stop codons will be deleted if pcDNA3.1+ /C-(K)DYK vector is selected.
RefSeq
NP_001350475.1
CDS 131..2035
Translation
Target ORF information:
RefSeq Version NM_001363546.1
Organism Homo sapiens(human)
Definition Homo sapiens peptidoglycan recognition protein 2 (PGLYRP2), transcript variant 2, mRNA.
Target ORF information:
Epitope DYKDDDDK
Bacterial selection AMPR
Mammalian selection NeoR
Vector pcDNA3.1+ /C-(K)DYK
NM_001363546.1
ORF Insert Sequence:
1 61 121 181 241 301 361 421 481 541 601 661 721 781 841 901 961 1021 1081 1141 1201 1261 1321 1381 1441 1501 1561 1621 1681 1741 1801 1861 ATGGCCCAGG GTGTCCTCTG GATCCTACTC GGATTGCTAC TGTGGTCAGA CCCAGGGACA GCCTCCCTGC CCCTGCTCAT GGACTCTGTC ATCCAGGCCC TGGCTGAGCT GGAGCAGAAA GTGCCAGCTG CCAAGACCAG ACACACAGCT TCTGCGTGGC TGATGTCAGC TCCAAACTCT GGCCCCCACA ATCGCCTCTA CCACTTCCTG CTGGGGGCAT GGAGCCTCAA TGCTACAGAG TTGGATCCCT GCCCACTAAG CCCAGAGCTG TTAGGCCTGA CCAAGGAGGT GGCCCGACAT GACGTACGAG AAGGGAAGGA ATATGGGGTG GTGCTGGCAC CTGATGGCTC GACCGTGGCT GTGGAGCCTC TGCTGGCGGG GCTGGAGGCA GGGCTGCAAG GGCGCAGGGT CATAAATTTG CCCTTGGACA GCATGGCTGC CCCTTGGGAG ACTGGAGATA CCTTTCCAGA TGTTGTGGCC ATTGCTCCAG ATGTAAGAGC CACCTCCTCC CCAGGACTCA GGGATGGCTC TCCAGATGTC ACCACTGCAG ATATTGGAGC CAACACTCCA GATGCTACAA AAGGCTGTCC AGATGTCCAA GCTTCCTTGC CAGATGCCAA AGCCAAGTCC CCACCGACCA TGGTGGACAG CCTCCTGGCA GTCACCCTGG CTGGAAACCT GGGCCTGACC TTCCTCCGAG GTTCCCAGAC CCAGAGCCAT CCAGACCTGG GAACTGAGGG CTGCTGGGAC CAGCTCTCTG CCCCTCGGAC CTTTACGCTT TTGGACCCCA AGGCATCTCT GTTAACCATG GCCTTCCTCA ATGGCGCCCT GGATGGGGTC ATCCTTGGAG ACTACCTGAG CCGGACTCCT GAGCCCCGGC CATCCCTCAG CCACTTGCTG AGCCAGTACT ATGGGGCTGG GGTGGCCAGA GACCCAGGGT TCCGCAGCAA CTTCCGACGG CAGAACGGTG CTGCTCTGAC TTCAGCCTCC ATCCTGGCCC AGCAGGTGTG GGGAACCCTT GTCCTTCTAC AGAGGCTGGA GCCAGTACAC CTCCAGCTTC AGTGCATGAG CCAAGAACAG CTGGCCCAGG TGGCTGCCAA TGCTACCAAG GAATTCACTG AGGCCTTCCT GGGATGCCCG GCCATCCACC CCCGCTGCCG CTGGGGAGCG GCGCCTTATC GGGGCCGCCC GAAGCTGCTG CAGCTGCCGC TGGGATTCTT GTACGTGCAT CACACCTACG TGCCTGCACC ACCCTGCACG GACTTCACGC GCTGCGCAGC CAACATGCGC TCCATGCAGC GCTACCACCA GGACACGCAA GGCTGGGGAG ACATCGGCTA CAGTTTCGTG GTGGGCTCGG ACGGCTACGT GTACGAGGGA CGCGGCTGGC ACTGGGTGGG CGCCCACACG CTCGGCCACA ACTCCCGGGG CTTCGGCGTG GCCATAGTGG GCAACTACAC CGCGGCGCTG CCCACCGAGG CCGCTCTGCG CACGGTGCGC GACACGCTCC CGAGTTGTGC GGTGCGCGCC GGCCTCCTGC GGCCAGACTA CGCGCTGCTG GGCCACCGCC AGCTGGTGCG CACCGACTGC CCCGGCGACG CGCTCTTCGA CCTGCTGCGC ACCTGGCCGC ACTTCACCGC GGTGAGTCTT CGCAGCCTGC ACTACACGGC CCGCCGCCCC TCCGTCTACA CAAGCTCCAC GAGGCCCCTG CCCCCTGCCT GTAACAGCTG TGCCCGCACA GCCTCAGCCA GGCCCCCAAC TTCCCGGCGG CACGTCTATT CAGGAAACCT AGGCCCAGCC TTTGCGGGTC ACTCTGCGGG CAACATCCCT GATCCTGTGA CTTCTGCCTA TGCAGCCTCA GCTCAGCCCC AGACCCAGCC AGCCTGTCCT TTCCCCAGCT CCTAA
The stop codons will be deleted if pcDNA3.1+ /C-(K)DYK vector is selected.
CloneID
OHu51409
Clone ID Related Accession (Same CDS sequence)
XM_006722633.3
, NM_001363546.1
Accession Version
XM_006722633.3 Latest version!
Documents for ORF clone product in default vector
Sequence Information
ORF Nucleotide Sequence (Length: 1905bp)
Protein sequence
SNP
Vector
pcDNA3.1+ /C-(K)DYK or customized vector
User Manual
Clone information
Clone Map
MSDS
Tag on pcDNA3.1+ /C-(K)DYK
C terminal DYKDDDDK tags
ORF Insert Method
CloneEZ™ Seamless cloning technology
Insert Structure
linear
Update Date
2016-06-05
Organism
Homo sapiens(human)
Product
N-acetylmuramoyl-L-alanine amidase isoform X1
Comment
Comment: MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NC_000019.10) annotated using gene prediction method: Gnomon, supported by mRNA and EST evidence. Also see: Documentation of NCBI's Annotation Process
On Jun 6, 2016 this sequence version replaced XM_006722633.2.
##Genome-Annotation-Data-START##
Annotation Provider :: NCBI
Annotation Status :: Full annotation
Annotation Version :: Homo sapiens Annotation Release 108
Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline
Annotation Software Version :: 7.0
Annotation Method :: Best-placed RefSeq; Gnomon
Features Annotated :: Gene; mRNA; CDS; ncRNA
##Genome-Annotation-Data-END##
1 61 121 181 241 301 361 421 481 541 601 661 721 781 841 901 961 1021 1081 1141 1201 1261 1321 1381 1441 1501 1561 1621 1681 1741 1801 1861 ATGGCCCAGG GTGTCCTCTG GATCCTACTC GGATTGCTAC TGTGGTCAGA CCCAGGGACA GCCTCCCTGC CCCTGCTCAT GGACTCTGTC ATCCAGGCCC TGGCTGAGCT GGAGCAGAAA GTGCCAGCTG CCAAGACCAG ACACACAGCT TCTGCGTGGC TGATGTCAGC TCCAAACTCT GGCCCCCACA ATCGCCTCTA CCACTTCCTG CTGGGGGCAT GGAGCCTCAA TGCTACAGAG TTGGATCCCT GCCCACTAAG CCCAGAGCTG TTAGGCCTGA CCAAGGAGGT GGCCCGACAT GACGTACGAG AAGGGAAGGA ATATGGGGTG GTGCTGGCAC CTGATGGCTC GACCGTGGCT GTGGAGCCTC TGCTGGCGGG GCTGGAGGCA GGGCTGCAAG GGCGCAGGGT CATAAATTTG CCCTTGGACA GCATGGCTGC CCCTTGGGAG ACTGGAGATA CCTTTCCAGA TGTTGTGGCC ATTGCTCCAG ATGTAAGAGC CACCTCCTCC CCAGGACTCA GGGATGGCTC TCCAGATGTC ACCACTGCAG ATATTGGAGC CAACACTCCA GATGCTACAA AAGGCTGTCC AGATGTCCAA GCTTCCTTGC CAGATGCCAA AGCCAAGTCC CCACCGACCA TGGTGGACAG CCTCCTGGCA GTCACCCTGG CTGGAAACCT GGGCCTGACC TTCCTCCGAG GTTCCCAGAC CCAGAGCCAT CCAGACCTGG GAACTGAGGG CTGCTGGGAC CAGCTCTCTG CCCCTCGGAC CTTTACGCTT TTGGACCCCA AGGCATCTCT GTTAACCATG GCCTTCCTCA ATGGCGCCCT GGATGGGGTC ATCCTTGGAG ACTACCTGAG CCGGACTCCT GAGCCCCGGC CATCCCTCAG CCACTTGCTG AGCCAGTACT ATGGGGCTGG GGTGGCCAGA GACCCAGGGT TCCGCAGCAA CTTCCGACGG CAGAACGGTG CTGCTCTGAC TTCAGCCTCC ATCCTGGCCC AGCAGGTGTG GGGAACCCTT GTCCTTCTAC AGAGGCTGGA GCCAGTACAC CTCCAGCTTC AGTGCATGAG CCAAGAACAG CTGGCCCAGG TGGCTGCCAA TGCTACCAAG GAATTCACTG AGGCCTTCCT GGGATGCCCG GCCATCCACC CCCGCTGCCG CTGGGGAGCG GCGCCTTATC GGGGCCGCCC GAAGCTGCTG CAGCTGCCGC TGGGATTCTT GTACGTGCAT CACACCTACG TGCCTGCACC ACCCTGCACG GACTTCACGC GCTGCGCAGC CAACATGCGC TCCATGCAGC GCTACCACCA GGACACGCAA GGCTGGGGAG ACATCGGCTA CAGTTTCGTG GTGGGCTCGG ACGGCTACGT GTACGAGGGA CGCGGCTGGC ACTGGGTGGG CGCCCACACG CTCGGCCACA ACTCCCGGGG CTTCGGCGTG GCCATAGTGG GCAACTACAC CGCGGCGCTG CCCACCGAGG CCGCTCTGCG CACGGTGCGC GACACGCTCC CGAGTTGTGC GGTGCGCGCC GGCCTCCTGC GGCCAGACTA CGCGCTGCTG GGCCACCGCC AGCTGGTGCG CACCGACTGC CCCGGCGACG CGCTCTTCGA CCTGCTGCGC ACCTGGCCGC ACTTCACCGC GGTGAGTCTT CGCAGCCTGC ACTACACGGC CCGCCGCCCC TCCGTCTACA CAAGCTCCAC GAGGCCCCTG CCCCCTGCCT GTAACAGCTG TGCCCGCACA GCCTCAGCCA GGCCCCCAAC TTCCCGGCGG CACGTCTATT CAGGAAACCT AGGCCCAGCC TTTGCGGGTC ACTCTGCGGG CAACATCCCT GATCCTGTGA CTTCTGCCTA TGCAGCCTCA GCTCAGCCCC AGACCCAGCC AGCCTGTCCT TTCCCCAGCT CCTAA
The stop codons will be deleted if pcDNA3.1+ /C-(K)DYK vector is selected.
RefSeq
XP_006722696.1
CDS 131..2035
Translation
Target ORF information:
RefSeq Version XM_006722633.3
Organism Homo sapiens(human)
Definition Homo sapiens peptidoglycan recognition protein 2 (PGLYRP2), transcript variant X1, mRNA.
Target ORF information:
Epitope DYKDDDDK
Bacterial selection AMPR
Mammalian selection NeoR
Vector pcDNA3.1+ /C-(K)DYK
XM_006722633.3
ORF Insert Sequence:
1 61 121 181 241 301 361 421 481 541 601 661 721 781 841 901 961 1021 1081 1141 1201 1261 1321 1381 1441 1501 1561 1621 1681 1741 1801 1861 ATGGCCCAGG GTGTCCTCTG GATCCTACTC GGATTGCTAC TGTGGTCAGA CCCAGGGACA GCCTCCCTGC CCCTGCTCAT GGACTCTGTC ATCCAGGCCC TGGCTGAGCT GGAGCAGAAA GTGCCAGCTG CCAAGACCAG ACACACAGCT TCTGCGTGGC TGATGTCAGC TCCAAACTCT GGCCCCCACA ATCGCCTCTA CCACTTCCTG CTGGGGGCAT GGAGCCTCAA TGCTACAGAG TTGGATCCCT GCCCACTAAG CCCAGAGCTG TTAGGCCTGA CCAAGGAGGT GGCCCGACAT GACGTACGAG AAGGGAAGGA ATATGGGGTG GTGCTGGCAC CTGATGGCTC GACCGTGGCT GTGGAGCCTC TGCTGGCGGG GCTGGAGGCA GGGCTGCAAG GGCGCAGGGT CATAAATTTG CCCTTGGACA GCATGGCTGC CCCTTGGGAG ACTGGAGATA CCTTTCCAGA TGTTGTGGCC ATTGCTCCAG ATGTAAGAGC CACCTCCTCC CCAGGACTCA GGGATGGCTC TCCAGATGTC ACCACTGCAG ATATTGGAGC CAACACTCCA GATGCTACAA AAGGCTGTCC AGATGTCCAA GCTTCCTTGC CAGATGCCAA AGCCAAGTCC CCACCGACCA TGGTGGACAG CCTCCTGGCA GTCACCCTGG CTGGAAACCT GGGCCTGACC TTCCTCCGAG GTTCCCAGAC CCAGAGCCAT CCAGACCTGG GAACTGAGGG CTGCTGGGAC CAGCTCTCTG CCCCTCGGAC CTTTACGCTT TTGGACCCCA AGGCATCTCT GTTAACCATG GCCTTCCTCA ATGGCGCCCT GGATGGGGTC ATCCTTGGAG ACTACCTGAG CCGGACTCCT GAGCCCCGGC CATCCCTCAG CCACTTGCTG AGCCAGTACT ATGGGGCTGG GGTGGCCAGA GACCCAGGGT TCCGCAGCAA CTTCCGACGG CAGAACGGTG CTGCTCTGAC TTCAGCCTCC ATCCTGGCCC AGCAGGTGTG GGGAACCCTT GTCCTTCTAC AGAGGCTGGA GCCAGTACAC CTCCAGCTTC AGTGCATGAG CCAAGAACAG CTGGCCCAGG TGGCTGCCAA TGCTACCAAG GAATTCACTG AGGCCTTCCT GGGATGCCCG GCCATCCACC CCCGCTGCCG CTGGGGAGCG GCGCCTTATC GGGGCCGCCC GAAGCTGCTG CAGCTGCCGC TGGGATTCTT GTACGTGCAT CACACCTACG TGCCTGCACC ACCCTGCACG GACTTCACGC GCTGCGCAGC CAACATGCGC TCCATGCAGC GCTACCACCA GGACACGCAA GGCTGGGGAG ACATCGGCTA CAGTTTCGTG GTGGGCTCGG ACGGCTACGT GTACGAGGGA CGCGGCTGGC ACTGGGTGGG CGCCCACACG CTCGGCCACA ACTCCCGGGG CTTCGGCGTG GCCATAGTGG GCAACTACAC CGCGGCGCTG CCCACCGAGG CCGCTCTGCG CACGGTGCGC GACACGCTCC CGAGTTGTGC GGTGCGCGCC GGCCTCCTGC GGCCAGACTA CGCGCTGCTG GGCCACCGCC AGCTGGTGCG CACCGACTGC CCCGGCGACG CGCTCTTCGA CCTGCTGCGC ACCTGGCCGC ACTTCACCGC GGTGAGTCTT CGCAGCCTGC ACTACACGGC CCGCCGCCCC TCCGTCTACA CAAGCTCCAC GAGGCCCCTG CCCCCTGCCT GTAACAGCTG TGCCCGCACA GCCTCAGCCA GGCCCCCAAC TTCCCGGCGG CACGTCTATT CAGGAAACCT AGGCCCAGCC TTTGCGGGTC ACTCTGCGGG CAACATCCCT GATCCTGTGA CTTCTGCCTA TGCAGCCTCA GCTCAGCCCC AGACCCAGCC AGCCTGTCCT TTCCCCAGCT CCTAA
The stop codons will be deleted if pcDNA3.1+ /C-(K)DYK vector is selected.
Peptidoglycan recognition protein genes and risk of Parkinson's disease.
Movement disorders : official journal of the Movement Disorder Society29(9)1171-80(2014 Aug)
Goldman SM,Kamel F,Ross GW,Jewell SA,Marras C,Hoppin JA,Umbach DM,Bhudhikanok GS,Meng C,Korell M,Comyns K,Hauser RA,Jankovic J,Factor SA,Bressman S,Lyons KE,Sandler DP,Langston JW,Tanner CM
Gene variants associated with ischemic stroke: the cardiovascular health study.
Stroke40(2)363-8(2009 Feb)
Luke MM,O'Meara ES,Rowland CM,Shiffman D,Bare LA,Arellano AR,Longstreth WT Jr,Lumley T,Rice K,Tracy RP,Devlin JJ,Psaty BM