Gene Symbol | BPIFA3 |
Entrez Gene ID | 128861 |
Full Name | BPI fold containing family A member 3 |
Synonyms | C20orf71,SPLUNC3 |
General protein information |
|
Gene Type | protein-coding |
Organism | Homo sapiens(human) |
Genome |
ORF » Species Summary » Homo sapiens » BPIFA3 cDNA ORF clone
gRNAs
Gene Symbol | BPIFA3 |
Entrez Gene ID | 128861 |
Full Name | BPI fold containing family A member 3 |
Synonyms | C20orf71,SPLUNC3 |
General protein information |
|
Gene Type | protein-coding |
Organism | Homo sapiens(human) |
Genome |
mRNA | Protein | Name |
---|---|---|
NM_001042439.2 | NP_001035904.1 | BPI fold-containing family A member 3 isoform 2 precursor |
NM_178466.4 | NP_848561.2 | BPI fold-containing family A member 3 isoform 1 precursor |
NM_178466.5 | NP_848561.2 | BPI fold-containing family A member 3 isoform 1 precursor |
Homo sapiens (human) | BPIFA3 | NP_848561.2 |
BPIFA3 | XP_001105961.1 | |
Pan troglodytes (chimpanzee) | BPIFA3 | NP_001230207.1 |
Canis lupus familiaris (dog) | BPIFA3 | XP_852436.2 |
Bos taurus (cattle) | BPIFA3 | NP_001035625.1 |
Mus musculus (house mouse) | Bpifa3 | NP_082804.1 |
Rattus norvegicus (Norway rat) | Bpifa3 | NP_001103058.1 |
Systematic nomenclature for the PLUNC/PSP/BSP30/SMGB proteins as a subfamily of the BPI fold-containing superfamily.
Bingle CD, Seal RL, Craven CJ
Biochemical Society transactions39(4)977-83(2011 Aug)
Phylogenetic and evolutionary analysis of the PLUNC gene family.
Bingle CD, LeClair EE, Havard S, Bingle L, Gillingham P, Craven CJ
Protein science : a publication of the Protein Society13(2)422-30(2004 Feb)
PLUNC: a novel family of candidate host defence proteins expressed in the upper airways and nasopharynx.
Bingle CD, Craven CJ
Human molecular genetics11(8)937-43(2002 Apr)
The DNA sequence and comparative analysis of human chromosome 20.
Deloukas P, Matthews LH, Ashurst J, Burton J, Gilbert JG, Jones M, Stavrides G, Almeida JP, Babbage AK, Bagguley CL, Bailey J, Barlow KF, Bates KN, Beard LM, Beare DM, Beasley OP, Bird CP, Blakey SE, Bridgeman AM, Brown AJ, Buck D, Burrill W, Butler AP, Carder C, Carter NP, Chapman JC, Clamp M, Clark G, Clark LN, Clark SY, Clee CM, Clegg S, Cobley VE, Collier RE, Connor R, Corby NR, Coulson A, Coville GJ, Deadman R, Dhami P, Dunn M, Ellington AG, Frankland JA, Fraser A, French L, Garner P, Grafham DV, Griffiths C, Griffiths MN, Gwilliam R, Hall RE, Hammond S, Harley JL, Heath PD, Ho S, Holden JL, Howden PJ, Huckle E, Hunt AR, Hunt SE, Jekosch K, Johnson CM, Johnson D, Kay MP, Kimberley AM, King A, Knights A, Laird GK, Lawlor S, Lehvaslaiho MH, Leversha M, Lloyd C, Lloyd DM, Lovell JD, Marsh VL, Martin SL, McConnachie LJ, McLay K, McMurray AA, Milne S, Mistry D, Moore MJ, Mullikin JC, Nickerson T, Oliver K, Parker A, Patel R, Pearce TA, Peck AI, Phillimore BJ, Prathalingam SR, Plumb RW, Ramsay H, Rice CM, Ross MT, Scott CE, Sehra HK, Shownkeen R, Sims S, Skuce CD, Smith ML, Soderlund C, Steward CA, Sulston JE, Swann M, Sycamore N, Taylor R, Tee L, Thomas DW, Thorpe A, Tracey A, Tromans AC, Vaudin M, Wall M, Wallis JM, Whitehead SL, Whittaker P, Willey DL, Williams L, Williams SA, Wilming L, Wray PW, Hubbard T, Durbin RM, Bentley DR, Beck S, Rogers J
Nature414(6866)865-71(2001 Dec 20-27)
GeneRIFs: Gene References Into Functions What's a GeneRIF?
The following BPIFA3 gene cDNA ORF clone sequences were retrieved from the NCBI Reference Sequence Database (RefSeq). These sequences represent the protein coding region of the BPIFA3 cDNA ORF which is encoded by the open reading frame (ORF) sequence. ORF sequences can be delivered in our standard vector, pcDNA3.1+/C-(K)DYK or the vector of your choice as an expression/transfection-ready ORF clone. Not the clone you want? Click here to find your clone.
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CloneID | OHu11295![]() |
|
Clone ID Related Accession (Same CDS sequence) | NM_178466.4 , NM_178466.5 | |
Accession Version | NM_178466.4 | Documents for ORF clone product in default vector |
Sequence Information | ORF Nucleotide Sequence (Length: 765bp) Protein sequence SNP |
|
Vector | pcDNA3.1-C-(k)DYK or customized vector | ![]() |
Clone information | Clone Map | ![]() |
Tag on pcDNA3.1+/C-(K)DYK | C terminal DYKDDDDK tags | |
ORF Insert Method | CloneEZ™ Seamless cloning technology | |
Insert Structure | linear | |
Update Date | 2019-02-23 | |
Organism | Homo sapiens(human) | |
Product | BPI fold-containing family A member 3 isoform 1 precursor | |
Comment | Comment: VALIDATED REFSEQ: This record has undergone validation or preliminary review. The reference sequence was derived from AL121901.20, HY050111.1, BF966133.1, BC066354.1 and AI638623.1. On Jan 10, 2014 this sequence version replaced NM_178466.3. Transcript Variant: This variant (1) represents the longer transcript and encodes the longer protein (isoform 1). ##Evidence-Data-START## Transcript exon combination :: SRR5189667.80904.1, SRR5189667.59577.1 [ECO:0000332] RNAseq introns :: single sample supports all introns SAMEA1968968, SAMEA2148093 [ECO:0000348] ##Evidence-Data-END## COMPLETENESS: complete on the 3' end. |
1 | ATGATGTGTC CACTCTGGAG GCTCCTCATC TTCCTCGGGT TGCTGGCCTT GCCCTTGGCA |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
RefSeq | NP_848561.2 |
CDS | 228..992 |
Translation |
Target ORF information:
Target ORF information:
|
![]() |
1 | ATGATGTGTC CACTCTGGAG GCTCCTCATC TTCCTCGGGT TGCTGGCCTT GCCCTTGGCA |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
CloneID | OHu11295![]() |
|
Clone ID Related Accession (Same CDS sequence) | NM_178466.4 , NM_178466.5 | |
Accession Version | NM_178466.5 Latest version! | Documents for ORF clone product in default vector |
Sequence Information | ORF Nucleotide Sequence (Length: 765bp) Protein sequence SNP |
|
Vector | pcDNA3.1-C-(k)DYK or customized vector | ![]() |
Clone information | Clone Map | ![]() |
Tag on pcDNA3.1+/C-(K)DYK | C terminal DYKDDDDK tags | |
ORF Insert Method | CloneEZ™ Seamless cloning technology | |
Insert Structure | linear | |
Update Date | 2019-10-25 | |
Organism | Homo sapiens(human) | |
Product | BPI fold-containing family A member 3 isoform 1 precursor | |
Comment | Comment: VALIDATED REFSEQ: This record has undergone validation or preliminary review. The reference sequence was derived from HY050111.1, BF966133.1, BC066354.1 and AI638623.1. On May 17, 2019 this sequence version replaced NM_178466.4. Transcript Variant: This variant (1) represents the longer transcript and encodes the longer protein (isoform 1). ##Evidence-Data-START## Transcript exon combination :: SRR5189667.108696.1, SRR5189667.59577.1 [ECO:0000332] RNAseq introns :: single sample supports all introns SAMEA1968968, SAMEA2148093 [ECO:0000348] ##Evidence-Data-END## ##RefSeq-Attributes-START## MANE Ensembl match :: ENST00000375454.8/ ENSP00000364603.3 RefSeq Select criteria :: based on conservation, expression, longest protein ##RefSeq-Attributes-END## COMPLETENESS: complete on the 3' end. |
1 | ATGATGTGTC CACTCTGGAG GCTCCTCATC TTCCTCGGGT TGCTGGCCTT GCCCTTGGCA |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
RefSeq | NP_848561.2 |
CDS | 186..950 |
Translation |
Target ORF information:
Target ORF information:
|
![]() |
1 | ATGATGTGTC CACTCTGGAG GCTCCTCATC TTCCTCGGGT TGCTGGCCTT GCCCTTGGCA |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
CloneID | OHu12363![]() |
|
Clone ID Related Accession (Same CDS sequence) | NM_001042439.2 | |
Accession Version | NM_001042439.2 Latest version! | Documents for ORF clone product in default vector |
Sequence Information | ORF Nucleotide Sequence (Length: 657bp) Protein sequence SNP |
|
Vector | pcDNA3.1-C-(k)DYK or customized vector | ![]() |
Clone information | Clone Map | ![]() |
Tag on pcDNA3.1+/C-(K)DYK | C terminal DYKDDDDK tags | |
ORF Insert Method | CloneEZ™ Seamless cloning technology | |
Insert Structure | linear | |
Update Date | 2019-08-05 | |
Organism | Homo sapiens(human) | |
Product | BPI fold-containing family A member 3 isoform 2 precursor | |
Comment | Comment: VALIDATED REFSEQ: This record has undergone validation or preliminary review. The reference sequence was derived from AL121901.20, BC066354.1 and AI638623.1. On Jan 10, 2014 this sequence version replaced NM_001042439.1. Transcript Variant: This variant (2) lacks an alternate exon in the coding region compared to variant 1. The resulting protein (isoform 2) is shorter but has the same N- and C-termini compared to isoform 1. ##Evidence-Data-START## Transcript exon combination :: BC066354.1, BG717907.1 [ECO:0000332] RNAseq introns :: single sample supports all introns SAMEA1968968, SAMEA2148093 [ECO:0000348] ##Evidence-Data-END## COMPLETENESS: complete on the 3' end. |
1 | ATGATGTGTC CACTCTGGAG GCTCCTCATC TTCCTCGGGT TGCTGGCCTT GCCCTTGGCA |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
RefSeq | NP_001035904.1 |
CDS | 228..884 |
Translation |
Target ORF information:
Target ORF information:
|
![]() |
1 | ATGATGTGTC CACTCTGGAG GCTCCTCATC TTCCTCGGGT TGCTGGCCTT GCCCTTGGCA |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
Systematic nomenclature for the PLUNC/PSP/BSP30/SMGB proteins as a subfamily of the BPI fold-containing superfamily. |
Phylogenetic and evolutionary analysis of the PLUNC gene family. |
PLUNC: a novel family of candidate host defence proteins expressed in the upper airways and nasopharynx. |
The DNA sequence and comparative analysis of human chromosome 20. |