Gene Symbol | C11orf42 |
Entrez Gene ID | 160298 |
Full Name | chromosome 11 open reading frame 42 |
General protein information |
|
Gene Type | protein-coding |
Organism | Homo sapiens(human) |
Genome |
ORF » Species Summary » Homo sapiens » C11orf42 cDNA ORF clone
Gene Symbol | C11orf42 |
Entrez Gene ID | 160298 |
Full Name | chromosome 11 open reading frame 42 |
General protein information |
|
Gene Type | protein-coding |
Organism | Homo sapiens(human) |
Genome |
mRNA | Protein | Name |
---|---|---|
XM_011519926.2 | XP_011518228.1 | uncharacterized protein C11orf42 isoform X1 |
XM_011519927.2 | XP_011518229.1 | uncharacterized protein C11orf42 isoform X2 |
XM_011519927.3 | XP_011518229.1 | uncharacterized protein C11orf42 isoform X2 |
NM_173525.3 | NP_775796.2 | uncharacterized protein C11orf42 |
NM_173525.2 | NP_775796.2 | uncharacterized protein C11orf42 |
XM_011519926.3 | XP_011518228.1 | uncharacterized protein C11orf42 isoform X1 |
Canis lupus familiaris (dog) | C21H11orf42 | XP_534033.2 |
Mus musculus (house mouse) | Gm5901 | NP_001182656.1 |
Homo sapiens (human) | C11orf42 | NP_775796.2 |
Pan troglodytes (chimpanzee) | C11H11orf42 | XP_001163901.2 |
Rattus norvegicus (Norway rat) | RGD1561034 | XP_219097.3 |
C14H11orf42 | XP_001110465.1 | |
Bos taurus (cattle) | C15H11orf42 | XP_002693197.1 |
The status, quality, and expansion of the NIH full-length cDNA project: the Mammalian Gene Collection (MGC).
Gerhard DS, Wagner L, Feingold EA, Shenmen CM, Grouse LH, Schuler G, Klein SL, Old S, Rasooly R, Good P, Guyer M, Peck AM, Derge JG, Lipman D, Collins FS, Jang W, Sherry S, Feolo M, Misquitta L, Lee E, Rotmistrovsky K, Greenhut SF, Schaefer CF, Buetow K, Bonner TI, Haussler D, Kent J, Kiekhaus M, Furey T, Brent M, Prange C, Schreiber K, Shapiro N, Bhat NK, Hopkins RF, Hsie F, Driscoll T, Soares MB, Casavant TL, Scheetz TE, Brown-stein MJ, Usdin TB, Toshiyuki S, Carninci P, Piao Y, Dudekula DB, Ko MS, Kawakami K, Suzuki Y, Sugano S, Gruber CE, Smith MR, Simmons B, Moore T, Waterman R, Johnson SL, Ruan Y, Wei CL, Mathavan S, Gunaratne PH, Wu J, Garcia AM, Hulyk SW, Fuh E, Yuan Y, Sneed A, Kowis C, Hodgson A, Muzny DM, McPherson J, Gibbs RA, Fahey J, Helton E, Ketteman M, Madan A, Rodrigues S, Sanchez A, Whiting M, Madari A, Young AC, Wetherby KD, Granite SJ, Kwong PN, Brinkley CP, Pearson RL, Bouffard GG, Blakesly RW, Green ED, Dickson MC, Rodriguez AC, Grimwood J, Schmutz J, Myers RM, Butterfield YS, Griffith M, Griffith OL, Krzywinski MI, Liao N, Morin R, Morrin R, Palmquist D, Petrescu AS, Skalska U, Smailus DE, Stott JM, Schnerch A, Schein JE, Jones SJ, Holt RA, Baross A, Marra MA, Clifton S, Makowski KA, Bosak S, Malek J,
Genome research14(10B)2121-7(2004 Oct)
GeneRIFs: Gene References Into Functions What's a GeneRIF?
The following C11orf42 gene cDNA ORF clone sequences were retrieved from the NCBI Reference Sequence Database (RefSeq). These sequences represent the protein coding region of the C11orf42 cDNA ORF which is encoded by the open reading frame (ORF) sequence. ORF sequences can be delivered in our standard vector, pcDNA3.1+/C-(K)DYK or the vector of your choice as an expression/transfection-ready ORF clone. Not the clone you want? Click here to find your clone.
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CloneID | OHu01542 | |
Clone ID Related Accession (Same CDS sequence) | NM_173525.3 , NM_173525.2 | |
Accession Version | NM_173525.3 Latest version! | Documents for ORF clone product in default vector |
Sequence Information | ORF Nucleotide Sequence (Length: 1002bp) Protein sequence SNP |
|
Vector | pcDNA3.1-C-(k)DYK or customized vector | User Manual |
Clone information | Clone Map | MSDS |
Tag on pcDNA3.1+/C-(K)DYK | C terminal DYKDDDDK tags | |
ORF Insert Method | CloneEZ™ Seamless cloning technology | |
Insert Structure | linear | |
Update Date | 2019-10-25 | |
Organism | Homo sapiens(human) | |
Product | uncharacterized protein C11orf42 | |
Comment | Comment: VALIDATED REFSEQ: This record has undergone validation or preliminary review. The reference sequence was derived from AC022762.8, BC031612.1 and AA781757.1. On May 17, 2019 this sequence version replaced NM_173525.2. ##Evidence-Data-START## Transcript exon combination :: SRR5189667.64056.1, BC031612.1 [ECO:0000332] RNAseq introns :: single sample supports all introns SAMEA1968968, SAMEA2148093 [ECO:0000348] ##Evidence-Data-END## ##RefSeq-Attributes-START## MANE Ensembl match :: ENST00000316375.3/ ENSP00000321021.2 RefSeq Select criteria :: based on conservation, expression, longest protein ##RefSeq-Attributes-END## COMPLETENESS: complete on the 3' end. |
1 | ATGTTGGTGG GTACCCCCAA CCTGCTGACA CTGGATGAAG CTGATGCCAC CTGGACCCTC |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
RefSeq | NP_775796.2 |
CDS | 60..1061 |
Translation |
Target ORF information:
Target ORF information:
|
NM_173525.3 |
1 | ATGTTGGTGG GTACCCCCAA CCTGCTGACA CTGGATGAAG CTGATGCCAC CTGGACCCTC |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
CloneID | OHu01542 | |
Clone ID Related Accession (Same CDS sequence) | NM_173525.3 , NM_173525.2 | |
Accession Version | NM_173525.2 | Documents for ORF clone product in default vector |
Sequence Information | ORF Nucleotide Sequence (Length: 1002bp) Protein sequence SNP |
|
Vector | pcDNA3.1-C-(k)DYK or customized vector | User Manual |
Clone information | Clone Map | MSDS |
Tag on pcDNA3.1+/C-(K)DYK | C terminal DYKDDDDK tags | |
ORF Insert Method | CloneEZ™ Seamless cloning technology | |
Insert Structure | linear | |
Update Date | 2018-06-23 | |
Organism | Homo sapiens(human) | |
Product | uncharacterized protein C11orf42 | |
Comment | Comment: VALIDATED REFSEQ: This record has undergone validation or preliminary review. The reference sequence was derived from BC031612.1, AC022762.8 and AA781757.1. On Jan 5, 2010 this sequence version replaced NM_173525.1. ##Evidence-Data-START## Transcript exon combination :: BC031612.1, ERR279865.1049.1 [ECO:0000332] RNAseq introns :: single sample supports all introns SAMEA1968968, SAMEA2148093 [ECO:0000348] ##Evidence-Data-END## COMPLETENESS: complete on the 3' end. |
1 | ATGTTGGTGG GTACCCCCAA CCTGCTGACA CTGGATGAAG CTGATGCCAC CTGGACCCTC |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
RefSeq | NP_775796.2 |
CDS | 49..1050 |
Translation |
Target ORF information:
Target ORF information:
|
NM_173525.2 |
1 | ATGTTGGTGG GTACCCCCAA CCTGCTGACA CTGGATGAAG CTGATGCCAC CTGGACCCTC |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
CloneID | OHu77067 | |
Clone ID Related Accession (Same CDS sequence) | XM_011519926.2 , XM_011519926.3 | |
Accession Version | XM_011519926.2 | Documents for ORF clone product in default vector |
Sequence Information | ORF Nucleotide Sequence (Length: 912bp) Protein sequence SNP |
|
Vector | pcDNA3.1-C-(k)DYK or customized vector | User Manual |
Clone information | Clone Map | MSDS |
Tag on pcDNA3.1+/C-(K)DYK | C terminal DYKDDDDK tags | |
ORF Insert Method | CloneEZ™ Seamless cloning technology | |
Insert Structure | linear | |
Update Date | 2016-06-05 | |
Organism | Homo sapiens(human) | |
Product | uncharacterized protein C11orf42 isoform X1 | |
Comment | Comment: MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NC_000011.10) annotated using gene prediction method: Gnomon, supported by EST evidence. Also see: Documentation of NCBI's Annotation Process On Jun 6, 2016 this sequence version replaced XM_011519926.1. ##Genome-Annotation-Data-START## Annotation Provider :: NCBI Annotation Status :: Full annotation Annotation Version :: Homo sapiens Annotation Release 108 Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline Annotation Software Version :: 7.0 Annotation Method :: Best-placed RefSeq; Gnomon Features Annotated :: Gene; mRNA; CDS; ncRNA ##Genome-Annotation-Data-END## |
1 | ATGTTGGTGG GTACCCCCAA CCTGCTGACA CTGGATGAAG CTGATGCCAC CTGGACCCTC |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
RefSeq | XP_011518228.1 |
CDS | 2620..3531 |
Translation |
Target ORF information:
Target ORF information:
|
XM_011519926.2 |
1 | ATGTTGGTGG GTACCCCCAA CCTGCTGACA CTGGATGAAG CTGATGCCAC CTGGACCCTC |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
CloneID | OHu77067 | |
Clone ID Related Accession (Same CDS sequence) | XM_011519926.2 , XM_011519926.3 | |
Accession Version | XM_011519926.3 Latest version! | Documents for ORF clone product in default vector |
Sequence Information | ORF Nucleotide Sequence (Length: 912bp) Protein sequence SNP |
|
Vector | pcDNA3.1-C-(k)DYK or customized vector | User Manual |
Clone information | Clone Map | MSDS |
Tag on pcDNA3.1+/C-(K)DYK | C terminal DYKDDDDK tags | |
ORF Insert Method | CloneEZ™ Seamless cloning technology | |
Insert Structure | linear | |
Update Date | 2019-12-05 | |
Organism | Homo sapiens(human) | |
Product | uncharacterized protein C11orf42 isoform X1 | |
Comment | Comment: MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NC_000011.10) annotated using gene prediction method: Gnomon, supported by EST evidence. Also see: Documentation of NCBI's Annotation Process On Mar 26, 2018 this sequence version replaced XM_011519926.2. ##Genome-Annotation-Data-START## Annotation Provider :: NCBI Annotation Status :: Updated annotation Annotation Name :: Homo sapiens Updated Annotation Release 109.20191205 Annotation Version :: 109.20191205 Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline Annotation Software Version :: 8.3 Annotation Method :: Best-placed RefSeq; propagated RefSeq model Features Annotated :: Gene; mRNA; CDS; ncRNA ##Genome-Annotation-Data-END## |
1 | ATGTTGGTGG GTACCCCCAA CCTGCTGACA CTGGATGAAG CTGATGCCAC CTGGACCCTC |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
RefSeq | XP_011518228.1 |
CDS | 3712..4623 |
Translation |
Target ORF information:
Target ORF information:
|
XM_011519926.3 |
1 | ATGTTGGTGG GTACCCCCAA CCTGCTGACA CTGGATGAAG CTGATGCCAC CTGGACCCTC |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
CloneID | OHu77068 | |
Clone ID Related Accession (Same CDS sequence) | XM_011519927.2 , XM_011519927.3 | |
Accession Version | XM_011519927.2 | Documents for ORF clone product in default vector |
Sequence Information | ORF Nucleotide Sequence (Length: 897bp) Protein sequence SNP |
|
Vector | pcDNA3.1-C-(k)DYK or customized vector | User Manual |
Clone information | Clone Map | MSDS |
Tag on pcDNA3.1+/C-(K)DYK | C terminal DYKDDDDK tags | |
ORF Insert Method | CloneEZ™ Seamless cloning technology | |
Insert Structure | linear | |
Update Date | 2016-06-05 | |
Organism | Homo sapiens(human) | |
Product | uncharacterized protein C11orf42 isoform X2 | |
Comment | Comment: MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NC_000011.10) annotated using gene prediction method: Gnomon, supported by EST evidence. Also see: Documentation of NCBI's Annotation Process On Jun 6, 2016 this sequence version replaced XM_011519927.1. ##Genome-Annotation-Data-START## Annotation Provider :: NCBI Annotation Status :: Full annotation Annotation Version :: Homo sapiens Annotation Release 108 Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline Annotation Software Version :: 7.0 Annotation Method :: Best-placed RefSeq; Gnomon Features Annotated :: Gene; mRNA; CDS; ncRNA ##Genome-Annotation-Data-END## |
1 | ATGTTGGTGG GTACCCCCAA CCTGCTGACA CTGGATGAAG CTGATGCCAC CTGGACCCTC |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
RefSeq | XP_011518229.1 |
CDS | 2620..3516 |
Translation |
Target ORF information:
Target ORF information:
|
XM_011519927.2 |
1 | ATGTTGGTGG GTACCCCCAA CCTGCTGACA CTGGATGAAG CTGATGCCAC CTGGACCCTC |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
CloneID | OHu77068 | |
Clone ID Related Accession (Same CDS sequence) | XM_011519927.2 , XM_011519927.3 | |
Accession Version | XM_011519927.3 Latest version! | Documents for ORF clone product in default vector |
Sequence Information | ORF Nucleotide Sequence (Length: 897bp) Protein sequence SNP |
|
Vector | pcDNA3.1-C-(k)DYK or customized vector | User Manual |
Clone information | Clone Map | MSDS |
Tag on pcDNA3.1+/C-(K)DYK | C terminal DYKDDDDK tags | |
ORF Insert Method | CloneEZ™ Seamless cloning technology | |
Insert Structure | linear | |
Update Date | 2019-12-05 | |
Organism | Homo sapiens(human) | |
Product | uncharacterized protein C11orf42 isoform X2 | |
Comment | Comment: MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NC_000011.10) annotated using gene prediction method: Gnomon, supported by EST evidence. Also see: Documentation of NCBI's Annotation Process On Mar 26, 2018 this sequence version replaced XM_011519927.2. ##Genome-Annotation-Data-START## Annotation Provider :: NCBI Annotation Status :: Updated annotation Annotation Name :: Homo sapiens Updated Annotation Release 109.20191205 Annotation Version :: 109.20191205 Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline Annotation Software Version :: 8.3 Annotation Method :: Best-placed RefSeq; propagated RefSeq model Features Annotated :: Gene; mRNA; CDS; ncRNA ##Genome-Annotation-Data-END## |
1 | ATGTTGGTGG GTACCCCCAA CCTGCTGACA CTGGATGAAG CTGATGCCAC CTGGACCCTC |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
RefSeq | XP_011518229.1 |
CDS | 3711..4607 |
Translation |
Target ORF information:
Target ORF information:
|
XM_011519927.3 |
1 | ATGTTGGTGG GTACCCCCAA CCTGCTGACA CTGGATGAAG CTGATGCCAC CTGGACCCTC |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
The status, quality, and expansion of the NIH full-length cDNA project: the Mammalian Gene Collection (MGC). |