Gene Symbol | BTBD3 |
Entrez Gene ID | 22903 |
Full Name | BTB domain containing 3 |
Synonyms | dJ742J24.1 |
General protein information |
|
Gene Type | protein-coding |
Organism | Homo sapiens(human) |
Genome | |
Disorder MIM: |
ORF » Species Summary » Homo sapiens » BTBD3 cDNA ORF clone
gRNAs
Gene Symbol | BTBD3 |
Entrez Gene ID | 22903 |
Full Name | BTB domain containing 3 |
Synonyms | dJ742J24.1 |
General protein information |
|
Gene Type | protein-coding |
Organism | Homo sapiens(human) |
Genome | |
Disorder MIM: |
mRNA | Protein | Name |
---|---|---|
NM_014962.3 | NP_055777.1 | BTB/POZ domain-containing protein 3 isoform a |
NM_001282551.1 | NP_001269480.1 | BTB/POZ domain-containing protein 3 isoform b |
NM_181443.3 | NP_852108.2 | BTB/POZ domain-containing protein 3 isoform d |
XM_017027730.2 | XP_016883219.1 | BTB/POZ domain-containing protein 3 isoform X2 |
XM_017027728.1 | XP_016883217.1 | BTB/POZ domain-containing protein 3 isoform X1 |
XM_017027729.1 | XP_016883218.1 | BTB/POZ domain-containing protein 3 isoform X1 |
XM_017027728.2 | XP_016883217.1 | BTB/POZ domain-containing protein 3 isoform X1 |
NM_001282554.1 | NP_001269483.1 | BTB/POZ domain-containing protein 3 isoform c |
NM_001282550.1 | NP_001269479.1 | BTB/POZ domain-containing protein 3 isoform b |
NM_001282552.2 | NP_001269481.1 | BTB/POZ domain-containing protein 3 isoform c |
XM_017027730.1 | XP_016883219.1 | BTB/POZ domain-containing protein 3 isoform X2 |
NM_014962.4 | NP_055777.1 | BTB/POZ domain-containing protein 3 isoform a |
BTBD3 | XP_001082699.1 | |
Bos taurus (cattle) | BTBD3 | XP_002692079.2 |
Gallus gallus (chicken) | BTBD3 | XP_004935291.1 |
Danio rerio (zebrafish) | btbd3b | XP_003199784.1 |
Homo sapiens (human) | BTBD3 | NP_055777.1 |
Mus musculus (house mouse) | Btbd3 | NP_663509.2 |
Rattus norvegicus (Norway rat) | Btbd3 | NP_001101252.1 |
Drosophila melanogaster (fruit fly) | lute | NP_001247149.1 |
Pan troglodytes (chimpanzee) | BTBD3 | XP_525266.2 |
Xenopus tropicalis (tropical clawed frog) | btbd3 | NP_001090697.1 |
Canis lupus familiaris (dog) | BTBD3 | XP_005634838.1 |
Anopheles gambiae (African malaria mosquito) | AgaP_AGAP004234 | XP_313147.4 |
Salt-inducible kinase 3, SIK3, is a new gene associated with hearing.
Wolber LE, Girotto G, Buniello A, Vuckovic D, Pirastu N, Lorente-C?novas B, Rudan I, Hayward C, Polasek O, Ciullo M, Mangino M, Steves C, Concas MP, Cocca M, Spector TD, Gasparini P, Steel KP, Williams FM
Human molecular genetics23(23)6407-18(2014 Dec)
Target gene repression mediated by miRNAs miR-181c and miR-9 both of which are down-regulated by amyloid-?.
Schonrock N, Humphreys DT, Preiss T, G?tz J
Journal of molecular neuroscience : MN46(2)324-35(2012 Feb)
Novel genetic loci identified for the pathophysiology of childhood obesity in the Hispanic population.
Comuzzie AG, Cole SA, Laston SL, Voruganti VS, Haack K, Gibbs RA, Butte NF
PloS one7(12)e51954(2012)
Hypertrophy-associated polymorphisms ascertained in a founder cohort applied to heart failure risk and mortality.
Parsa A, Chang YP, Kelly RJ, Corretti MC, Ryan KA, Robinson SW, Gottlieb SS, Kardia SL, Shuldiner AR, Liggett SB
Clinical and translational science4(1)17-23(2011 Feb)
Genome-wide examination of genetic variants associated with response to platinum-based chemotherapy in patients with small-cell lung cancer.
Wu C, Xu B, Yuan P, Ott J, Guan Y, Liu Y, Liu Z, Shen Y, Yu D, Lin D
Pharmacogenetics and genomics20(6)389-95(2010 Jun)
GeneRIFs: Gene References Into Functions What's a GeneRIF?
BTBD3 is repressed by miR-9 and -181c, either alone or in combination.
Title: Target gene repression mediated by miRNAs miR-181c and miR-9 both of which are down-regulated by amyloid-?.
Observational study and genome-wide association study of gene-disease association. (HuGE Navigator)
Title: Genome-wide examination of genetic variants associated with response to platinum-based chemotherapy in patients with small-cell lung cancer.
The following BTBD3 gene cDNA ORF clone sequences were retrieved from the NCBI Reference Sequence Database (RefSeq). These sequences represent the protein coding region of the BTBD3 cDNA ORF which is encoded by the open reading frame (ORF) sequence. ORF sequences can be delivered in our standard vector, pcDNA3.1+/C-(K)DYK or the vector of your choice as an expression/transfection-ready ORF clone. Not the clone you want? Click here to find your clone.
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CloneID | OHu10457![]() |
|
Clone ID Related Accession (Same CDS sequence) | NM_001282551.1 , XM_017027728.1 , XM_017027729.1 , XM_017027728.2 , NM_001282550.1 | |
Accession Version | NM_001282551.1 Latest version! | Documents for ORF clone product in default vector |
Sequence Information | ORF Nucleotide Sequence (Length: 1386bp) Protein sequence SNP |
|
Vector | pcDNA3.1-C-(k)DYK or customized vector | ![]() |
Clone information | Clone Map | ![]() |
Tag on pcDNA3.1+/C-(K)DYK | C terminal DYKDDDDK tags | |
ORF Insert Method | CloneEZ™ Seamless cloning technology | |
Insert Structure | linear | |
Update Date | 2018-06-29 | |
Organism | Homo sapiens(human) | |
Product | BTB/POZ domain-containing protein 3 isoform b | |
Comment | Comment: VALIDATED REFSEQ: This record has undergone validation or preliminary review. The reference sequence was derived from DC314595.1, BC109316.1, AL035448.29 and AA127941.1. Transcript Variant: This variant (4) differs in the 5' UTR and coding sequence compared to variant 2. The resulting isoform (b) is shorter at the N-terminus compared to isoform d. Variants 3 and 4 both encode the same isoform (b). Sequence Note: This RefSeq record was created from transcript and genomic sequence data to make the sequence consistent with the reference genome assembly. The genomic coordinates used for the transcript record were based on transcript alignments. ##Evidence-Data-START## Transcript exon combination :: SRR1803611.224389.1, SRR1660809.34968.1 [ECO:0000332] RNAseq introns :: single sample supports all introns SAMEA1966682, SAMEA1968189 [ECO:0000348] ##Evidence-Data-END## COMPLETENESS: complete on the 3' end. |
1 | ATGGCTGCTG ATATATTCCC CCGTAAAAAG CCAGCCAACT CCAGCAGCAC CAGCGTCCAG |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
RefSeq | NP_001269480.1 |
CDS | 273..1658 |
Translation |
Target ORF information:
Target ORF information:
|
![]() |
1 | ATGGCTGCTG ATATATTCCC CCGTAAAAAG CCAGCCAACT CCAGCAGCAC CAGCGTCCAG |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
CloneID | OHu10457![]() |
|
Clone ID Related Accession (Same CDS sequence) | NM_001282551.1 , XM_017027728.1 , XM_017027729.1 , XM_017027728.2 , NM_001282550.1 | |
Accession Version | NM_001282550.1 Latest version! | Documents for ORF clone product in default vector |
Sequence Information | ORF Nucleotide Sequence (Length: 1386bp) Protein sequence SNP |
|
Vector | pcDNA3.1-C-(k)DYK or customized vector | ![]() |
Clone information | Clone Map | ![]() |
Tag on pcDNA3.1+/C-(K)DYK | C terminal DYKDDDDK tags | |
ORF Insert Method | CloneEZ™ Seamless cloning technology | |
Insert Structure | linear | |
Update Date | 2018-06-29 | |
Organism | Homo sapiens(human) | |
Product | BTB/POZ domain-containing protein 3 isoform b | |
Comment | Comment: VALIDATED REFSEQ: This record has undergone validation or preliminary review. The reference sequence was derived from DC418438.1, AK299281.1, AL035448.29 and AA127941.1. Transcript Variant: This variant (3) differs in the 5' UTR and coding sequence compared to variant 2. The resulting isoform (b) is shorter at the N-terminus compared to isoform d. Variants 3 and 4 both encode the same isoform (b). Sequence Note: This RefSeq record was created from transcript and genomic sequence data to make the sequence consistent with the reference genome assembly. The genomic coordinates used for the transcript record were based on transcript alignments. ##Evidence-Data-START## Transcript exon combination :: DC418438.1, SRR1660809.6010.1 [ECO:0000332] RNAseq introns :: single sample supports all introns SAMEA1968968, SAMEA1970526 [ECO:0000348] ##Evidence-Data-END## COMPLETENESS: complete on the 3' end. |
1 | ATGGCTGCTG ATATATTCCC CCGTAAAAAG CCAGCCAACT CCAGCAGCAC CAGCGTCCAG |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
RefSeq | NP_001269479.1 |
CDS | 177..1562 |
Translation |
Target ORF information:
Target ORF information:
|
![]() |
1 | ATGGCTGCTG ATATATTCCC CCGTAAAAAG CCAGCCAACT CCAGCAGCAC CAGCGTCCAG |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
CloneID | OHu10457![]() |
|
Clone ID Related Accession (Same CDS sequence) | NM_001282551.1 , XM_017027728.1 , XM_017027729.1 , XM_017027728.2 , NM_001282550.1 | |
Accession Version | XM_017027728.1 | Documents for ORF clone product in default vector |
Sequence Information | ORF Nucleotide Sequence (Length: 1386bp) Protein sequence SNP |
|
Vector | pcDNA3.1-C-(k)DYK or customized vector | ![]() |
Clone information | Clone Map | ![]() |
Tag on pcDNA3.1+/C-(K)DYK | C terminal DYKDDDDK tags | |
ORF Insert Method | CloneEZ™ Seamless cloning technology | |
Insert Structure | linear | |
Update Date | 2016-06-05 | |
Organism | Homo sapiens(human) | |
Product | BTB/POZ domain-containing protein 3 isoform X1 | |
Comment | Comment: MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NC_000020.11) annotated using gene prediction method: Gnomon, supported by mRNA and EST evidence. Also see: Documentation of NCBI's Annotation Process ##Genome-Annotation-Data-START## Annotation Provider :: NCBI Annotation Status :: Full annotation Annotation Version :: Homo sapiens Annotation Release 108 Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline Annotation Software Version :: 7.0 Annotation Method :: Best-placed RefSeq; Gnomon Features Annotated :: Gene; mRNA; CDS; ncRNA ##Genome-Annotation-Data-END## |
1 | ATGGCTGCTG ATATATTCCC CCGTAAAAAG CCAGCCAACT CCAGCAGCAC CAGCGTCCAG |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
RefSeq | XP_016883217.1 |
CDS | 506..1891 |
Translation |
Target ORF information:
Target ORF information:
|
![]() |
1 | ATGGCTGCTG ATATATTCCC CCGTAAAAAG CCAGCCAACT CCAGCAGCAC CAGCGTCCAG |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
CloneID | OHu10457![]() |
|
Clone ID Related Accession (Same CDS sequence) | NM_001282551.1 , XM_017027728.1 , XM_017027729.1 , XM_017027728.2 , NM_001282550.1 | |
Accession Version | XM_017027729.1 Latest version! | Documents for ORF clone product in default vector |
Sequence Information | ORF Nucleotide Sequence (Length: 1386bp) Protein sequence SNP |
|
Vector | pcDNA3.1-C-(k)DYK or customized vector | ![]() |
Clone information | Clone Map | ![]() |
Tag on pcDNA3.1+/C-(K)DYK | C terminal DYKDDDDK tags | |
ORF Insert Method | CloneEZ™ Seamless cloning technology | |
Insert Structure | linear | |
Update Date | 2016-06-05 | |
Organism | Homo sapiens(human) | |
Product | BTB/POZ domain-containing protein 3 isoform X1 | |
Comment | Comment: MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NC_000020.11) annotated using gene prediction method: Gnomon, supported by mRNA and EST evidence. Also see: Documentation of NCBI's Annotation Process ##Genome-Annotation-Data-START## Annotation Provider :: NCBI Annotation Status :: Full annotation Annotation Version :: Homo sapiens Annotation Release 108 Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline Annotation Software Version :: 7.0 Annotation Method :: Best-placed RefSeq; Gnomon Features Annotated :: Gene; mRNA; CDS; ncRNA ##Genome-Annotation-Data-END## |
1 | ATGGCTGCTG ATATATTCCC CCGTAAAAAG CCAGCCAACT CCAGCAGCAC CAGCGTCCAG |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
RefSeq | XP_016883218.1 |
CDS | 438..1823 |
Translation |
Target ORF information:
Target ORF information:
|
![]() |
1 | ATGGCTGCTG ATATATTCCC CCGTAAAAAG CCAGCCAACT CCAGCAGCAC CAGCGTCCAG |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
CloneID | OHu10457![]() |
|
Clone ID Related Accession (Same CDS sequence) | NM_001282551.1 , XM_017027728.1 , XM_017027729.1 , XM_017027728.2 , NM_001282550.1 | |
Accession Version | XM_017027728.2 Latest version! | Documents for ORF clone product in default vector |
Sequence Information | ORF Nucleotide Sequence (Length: 1386bp) Protein sequence SNP |
|
Vector | pcDNA3.1-C-(k)DYK or customized vector | ![]() |
Clone information | Clone Map | ![]() |
Tag on pcDNA3.1+/C-(K)DYK | C terminal DYKDDDDK tags | |
ORF Insert Method | CloneEZ™ Seamless cloning technology | |
Insert Structure | linear | |
Update Date | 2019-12-05 | |
Organism | Homo sapiens(human) | |
Product | BTB/POZ domain-containing protein 3 isoform X1 | |
Comment | Comment: MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NC_000020.11) annotated using gene prediction method: Gnomon, supported by mRNA and EST evidence. Also see: Documentation of NCBI's Annotation Process On Mar 26, 2018 this sequence version replaced XM_017027728.1. ##Genome-Annotation-Data-START## Annotation Provider :: NCBI Annotation Status :: Updated annotation Annotation Name :: Homo sapiens Updated Annotation Release 109.20191205 Annotation Version :: 109.20191205 Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline Annotation Software Version :: 8.3 Annotation Method :: Best-placed RefSeq; propagated RefSeq model Features Annotated :: Gene; mRNA; CDS; ncRNA ##Genome-Annotation-Data-END## |
1 | ATGGCTGCTG ATATATTCCC CCGTAAAAAG CCAGCCAACT CCAGCAGCAC CAGCGTCCAG |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
RefSeq | XP_016883217.1 |
CDS | 453..1838 |
Translation |
Target ORF information:
Target ORF information:
|
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1 | ATGGCTGCTG ATATATTCCC CCGTAAAAAG CCAGCCAACT CCAGCAGCAC CAGCGTCCAG |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
CloneID | OHu07943 | |
Clone ID Related Accession (Same CDS sequence) | XM_017027730.2 , NM_001282554.1 , NM_001282552.2 , XM_017027730.1 | |
Accession Version | NM_001282554.1 Latest version! | Documents for ORF clone product in default vector |
Sequence Information | ORF Nucleotide Sequence (Length: 1116bp) Protein sequence SNP |
|
Vector | pcDNA3.1-C-(k)DYK or customized vector | ![]() |
Clone information | Clone Map | ![]() |
Tag on pcDNA3.1+/C-(K)DYK | C terminal DYKDDDDK tags | |
ORF Insert Method | CloneEZ™ Seamless cloning technology | |
Insert Structure | linear | |
Update Date | 2018-06-29 | |
Organism | Homo sapiens(human) | |
Product | BTB/POZ domain-containing protein 3 isoform c | |
Comment | Comment: VALIDATED REFSEQ: This record has undergone validation or preliminary review. The reference sequence was derived from DC314595.1, AK316256.1, AL035448.29 and AA127941.1. Transcript Variant: This variant (6) differs in the 5' UTR and lacks an alternate exon compared to variant 2. It encodes isoform c, which has a shorter N-terminus compared to isoform b. Variants 5 and 6 both encode the same isoform (c). Sequence Note: This RefSeq record was created from transcript and genomic sequence data to make the sequence consistent with the reference genome assembly. The genomic coordinates used for the transcript record were based on transcript alignments. ##Evidence-Data-START## Transcript exon combination :: SRR1803615.15592.1, AK316256.1 [ECO:0000332] RNAseq introns :: single sample supports all introns SAMEA1968540, SAMEA1968832 [ECO:0000348] ##Evidence-Data-END## COMPLETENESS: complete on the 3' end. |
1 | ATGTTTTACG GAGAACTTGC AGAGGACAAA GATGAAATCC GTATACCAGA TGTCGAACCT |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
RefSeq | NP_001269483.1 |
CDS | 452..1567 |
Translation |
Target ORF information:
Target ORF information:
|
![]() |
1 | ATGTTTTACG GAGAACTTGC AGAGGACAAA GATGAAATCC GTATACCAGA TGTCGAACCT |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
CloneID | OHu07943 | |
Clone ID Related Accession (Same CDS sequence) | XM_017027730.2 , NM_001282554.1 , NM_001282552.2 , XM_017027730.1 | |
Accession Version | NM_001282552.2 Latest version! | Documents for ORF clone product in default vector |
Sequence Information | ORF Nucleotide Sequence (Length: 1116bp) Protein sequence SNP |
|
Vector | pcDNA3.1-C-(k)DYK or customized vector | ![]() |
Clone information | Clone Map | ![]() |
Tag on pcDNA3.1+/C-(K)DYK | C terminal DYKDDDDK tags | |
ORF Insert Method | CloneEZ™ Seamless cloning technology | |
Insert Structure | linear | |
Update Date | 2018-06-29 | |
Organism | Homo sapiens(human) | |
Product | BTB/POZ domain-containing protein 3 isoform c | |
Comment | Comment: VALIDATED REFSEQ: This record has undergone validation or preliminary review. The reference sequence was derived from AK299281.1, DR759697.1, AL035448.29 and AA127941.1. On Nov 5, 2013 this sequence version replaced NM_001282552.1. Transcript Variant: This variant (5) lacks an alternate exon and uses a downstream start codon compared to variant 2. It encodes isoform c, which has a shorter N-terminus compared to isoform b. Variants 5 and 6 both encode the same isoform (c). Sequence Note: This RefSeq record was created from transcript and genomic sequence data to make the sequence consistent with the reference genome assembly. The genomic coordinates used for the transcript record were based on transcript alignments. ##Evidence-Data-START## Transcript exon combination :: SRR1660803.133463.1, SRR1803614.154073.1 [ECO:0000332] RNAseq introns :: single sample supports all introns SAMEA1968540, SAMEA1968832 [ECO:0000348] ##Evidence-Data-END## COMPLETENESS: complete on the 3' end. |
1 | ATGTTTTACG GAGAACTTGC AGAGGACAAA GATGAAATCC GTATACCAGA TGTCGAACCT |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
RefSeq | NP_001269481.1 |
CDS | 537..1652 |
Translation |
Target ORF information:
Target ORF information:
|
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1 | ATGTTTTACG GAGAACTTGC AGAGGACAAA GATGAAATCC GTATACCAGA TGTCGAACCT |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
CloneID | OHu07943 | |
Clone ID Related Accession (Same CDS sequence) | XM_017027730.2 , NM_001282554.1 , NM_001282552.2 , XM_017027730.1 | |
Accession Version | XM_017027730.2 Latest version! | Documents for ORF clone product in default vector |
Sequence Information | ORF Nucleotide Sequence (Length: 1116bp) Protein sequence SNP |
|
Vector | pcDNA3.1-C-(k)DYK or customized vector | ![]() |
Clone information | Clone Map | ![]() |
Tag on pcDNA3.1+/C-(K)DYK | C terminal DYKDDDDK tags | |
ORF Insert Method | CloneEZ™ Seamless cloning technology | |
Insert Structure | linear | |
Update Date | 2019-12-05 | |
Organism | Homo sapiens(human) | |
Product | BTB/POZ domain-containing protein 3 isoform X2 | |
Comment | Comment: MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NC_000020.11) annotated using gene prediction method: Gnomon, supported by mRNA and EST evidence. Also see: Documentation of NCBI's Annotation Process On Mar 26, 2018 this sequence version replaced XM_017027730.1. ##Genome-Annotation-Data-START## Annotation Provider :: NCBI Annotation Status :: Updated annotation Annotation Name :: Homo sapiens Updated Annotation Release 109.20191205 Annotation Version :: 109.20191205 Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline Annotation Software Version :: 8.3 Annotation Method :: Best-placed RefSeq; propagated RefSeq model Features Annotated :: Gene; mRNA; CDS; ncRNA ##Genome-Annotation-Data-END## |
1 | ATGTTTTACG GAGAACTTGC AGAGGACAAA GATGAAATCC GTATACCAGA TGTCGAACCT |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
RefSeq | XP_016883219.1 |
CDS | 769..1884 |
Translation |
Target ORF information:
Target ORF information:
|
![]() |
1 | ATGTTTTACG GAGAACTTGC AGAGGACAAA GATGAAATCC GTATACCAGA TGTCGAACCT |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
CloneID | OHu07943 | |
Clone ID Related Accession (Same CDS sequence) | XM_017027730.2 , NM_001282554.1 , NM_001282552.2 , XM_017027730.1 | |
Accession Version | XM_017027730.1 | Documents for ORF clone product in default vector |
Sequence Information | ORF Nucleotide Sequence (Length: 1116bp) Protein sequence SNP |
|
Vector | pcDNA3.1-C-(k)DYK or customized vector | ![]() |
Clone information | Clone Map | ![]() |
Tag on pcDNA3.1+/C-(K)DYK | C terminal DYKDDDDK tags | |
ORF Insert Method | CloneEZ™ Seamless cloning technology | |
Insert Structure | linear | |
Update Date | 2016-06-05 | |
Organism | Homo sapiens(human) | |
Product | BTB/POZ domain-containing protein 3 isoform X2 | |
Comment | Comment: MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NC_000020.11) annotated using gene prediction method: Gnomon, supported by mRNA and EST evidence. Also see: Documentation of NCBI's Annotation Process ##Genome-Annotation-Data-START## Annotation Provider :: NCBI Annotation Status :: Full annotation Annotation Version :: Homo sapiens Annotation Release 108 Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline Annotation Software Version :: 7.0 Annotation Method :: Best-placed RefSeq; Gnomon Features Annotated :: Gene; mRNA; CDS; ncRNA ##Genome-Annotation-Data-END## |
1 | ATGTTTTACG GAGAACTTGC AGAGGACAAA GATGAAATCC GTATACCAGA TGTCGAACCT |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
RefSeq | XP_016883219.1 |
CDS | 796..1911 |
Translation |
Target ORF information:
Target ORF information:
|
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1 | ATGTTTTACG GAGAACTTGC AGAGGACAAA GATGAAATCC GTATACCAGA TGTCGAACCT |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
CloneID | OHu09819 | |
Clone ID Related Accession (Same CDS sequence) | NM_014962.3 , NM_014962.4 | |
Accession Version | NM_014962.3 | Documents for ORF clone product in default vector |
Sequence Information | ORF Nucleotide Sequence (Length: 1569bp) Protein sequence SNP |
|
Vector | pcDNA3.1-C-(k)DYK or customized vector | ![]() |
Clone information | Clone Map | ![]() |
Tag on pcDNA3.1+/C-(K)DYK | C terminal DYKDDDDK tags | |
ORF Insert Method | CloneEZ™ Seamless cloning technology | |
Insert Structure | linear | |
Update Date | 2017-10-02 | |
Organism | Homo sapiens(human) | |
Product | BTB/POZ domain-containing protein 3 isoform a | |
Comment | Comment: VALIDATED REFSEQ: This record has undergone validation or preliminary review. The reference sequence was derived from DC314595.1, AB023169.1, AL035448.29 and AA127941.1. On Sep 13, 2013 this sequence version replaced NM_014962.2. Transcript Variant: This variant (1) differs in the 5' UTR and coding sequence compared to variant 2. The resulting isoform (a) has a shorter and distinct N-terminus compared to isoform d. Sequence Note: This RefSeq record was created from transcript and genomic sequence data to make the sequence consistent with the reference genome assembly. The genomic coordinates used for the transcript record were based on transcript alignments. ##Evidence-Data-START## Transcript exon combination :: SRR1660809.194285.1, SRR1660803.150635.1 [ECO:0000332] RNAseq introns :: single sample supports all introns SAMEA1965299, SAMEA1966682 [ECO:0000348] ##Evidence-Data-END## COMPLETENESS: complete on the 3' end. |
1 | ATGGTAGATG ACAAGGAAAA GAACATGAAA TGTCTCACCT TCTTCTTGAT GCTTCCAGAG |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
RefSeq | NP_055777.1 |
CDS | 412..1980 |
Translation |
Target ORF information:
Target ORF information:
|
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1 | ATGGTAGATG ACAAGGAAAA GAACATGAAA TGTCTCACCT TCTTCTTGAT GCTTCCAGAG |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
CloneID | OHu09819 | |
Clone ID Related Accession (Same CDS sequence) | NM_014962.3 , NM_014962.4 | |
Accession Version | NM_014962.4 Latest version! | Documents for ORF clone product in default vector |
Sequence Information | ORF Nucleotide Sequence (Length: 1569bp) Protein sequence SNP |
|
Vector | pcDNA3.1-C-(k)DYK or customized vector | ![]() |
Clone information | Clone Map | ![]() |
Tag on pcDNA3.1+/C-(K)DYK | C terminal DYKDDDDK tags | |
ORF Insert Method | CloneEZ™ Seamless cloning technology | |
Insert Structure | linear | |
Update Date | 2019-05-01 | |
Organism | Homo sapiens(human) | |
Product | BTB/POZ domain-containing protein 3 isoform a | |
Comment | Comment: VALIDATED REFSEQ: This record has undergone validation or preliminary review. The reference sequence was derived from DC314595.1, AB023169.1, AL035448.29 and AA127941.1. On Nov 22, 2018 this sequence version replaced NM_014962.3. Transcript Variant: This variant (1) differs in the 5' UTR and coding sequence compared to variant 2. The resulting isoform (a) has a shorter and distinct N-terminus compared to isoform d. Sequence Note: This RefSeq record was created from transcript and genomic sequence data to make the sequence consistent with the reference genome assembly. The genomic coordinates used for the transcript record were based on transcript alignments. ##Evidence-Data-START## Transcript exon combination :: SRR1660809.194285.1, SRR1803613.148290.1 [ECO:0000332] RNAseq introns :: single sample supports all introns SAMEA1965299, SAMEA1966682 [ECO:0000348] ##Evidence-Data-END## ##RefSeq-Attributes-START## MANE Ensembl match :: ENST00000378226.7/ ENSP00000367471.2 RefSeq Select criteria :: based on conservation, expression ##RefSeq-Attributes-END## COMPLETENESS: full length. |
1 | ATGGTAGATG ACAAGGAAAA GAACATGAAA TGTCTCACCT TCTTCTTGAT GCTTCCAGAG |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
RefSeq | NP_055777.1 |
CDS | 384..1952 |
Translation |
Target ORF information:
Target ORF information:
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1 | ATGGTAGATG ACAAGGAAAA GAACATGAAA TGTCTCACCT TCTTCTTGAT GCTTCCAGAG |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
CloneID | OHu00246 | |
Clone ID Related Accession (Same CDS sequence) | NM_181443.3 | |
Accession Version | NM_181443.3 Latest version! | Documents for ORF clone product in default vector |
Sequence Information | ORF Nucleotide Sequence (Length: 1698bp) Protein sequence SNP |
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Vector | pcDNA3.1-C-(k)DYK or customized vector | ![]() |
Clone information | Clone Map | ![]() |
Tag on pcDNA3.1+/C-(K)DYK | C terminal DYKDDDDK tags | |
ORF Insert Method | CloneEZ™ Seamless cloning technology | |
Insert Structure | linear | |
Update Date | 2018-06-29 | |
Organism | Homo sapiens(human) | |
Product | BTB/POZ domain-containing protein 3 isoform d | |
Comment | Comment: VALIDATED REFSEQ: This record has undergone validation or preliminary review. The reference sequence was derived from AK299281.1, AL035448.29 and AA127941.1. On or before Nov 6, 2013 this sequence version replaced XM_005260676.1, NM_181443.2. Transcript Variant: This variant (2) encodes the longest isoform (d). Sequence Note: This RefSeq record was created from transcript and genomic sequence data to make the sequence consistent with the reference genome assembly. The genomic coordinates used for the transcript record were based on transcript alignments. ##Evidence-Data-START## Transcript exon combination :: SRR1660805.87252.1, SRR1660807.21573.1 [ECO:0000332] RNAseq introns :: single sample supports all introns SAMEA1965299, SAMEA1966682 [ECO:0000348] ##Evidence-Data-END## COMPLETENESS: complete on the 3' end. |
1 | ATGCCGCTCC GCTCCCTCCC GGTGACCGGG CACGCGCGCT CGCTCCCGCA GAGCGTGCCC |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
RefSeq | NP_852108.2 |
CDS | 46..1743 |
Translation |
Target ORF information:
Target ORF information:
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1 | ATGCCGCTCC GCTCCCTCCC GGTGACCGGG CACGCGCGCT CGCTCCCGCA GAGCGTGCCC |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
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