The following HOXA1 gene cDNA ORF clone sequences were retrieved from the NCBI Reference Sequence Database (RefSeq). These sequences represent the protein coding region of the HOXA1 cDNA ORF which is encoded by the open reading frame (ORF) sequence. ORF sequences can be delivered in our standard vector, pcDNA3.1+/C-(K)DYK or the vector of your choice as an expression/transfection-ready ORF clone. Not the clone you want? Click here to find your clone.
CloneID |
OHu17199 |
Clone ID Related Accession (Same CDS sequence) |
NM_153620.2
|
Accession Version |
NM_153620.2 Latest version! |
Documents for ORF clone product in default vector |
Sequence Information |
ORF Nucleotide Sequence (Length: 414bp)
Protein sequence
SNP |
Vector |
pcDNA3.1+/C-(K)DYK or customized vector |
User Manual |
Clone information |
Clone Map |
MSDS |
Tag on pcDNA3.1+/C-(K)DYK |
C terminal DYKDDDDK tags |
ORF Insert Method |
CloneEZ™ Seamless cloning technology |
Insert Structure |
linear |
Update Date |
2019-02-09 |
Organism |
Homo sapiens(human) |
Product |
homeobox protein Hox-A1 isoform b |
Comment |
Comment: REVIEWED REFSEQ: This record has been curated by NCBI staff. The reference sequence was derived from DB246535.1, S79871.1 and BC032547.2. On Jan 10, 2006 this sequence version replaced NM_153620.1.
Transcript Variant: This variant (2) lacks an alternate coding segment compared to variant 1, which causes a frameshift. The resulting isoform (b) has a shorter, distinct C-terminus and lacks the homeodomain region compared to isoform a.
Publication Note: This RefSeq record includes a subset of the publications that are available for this gene. Please see the Gene record to access additional publications.
##Evidence-Data-START##
Transcript exon combination :: S79871.1, AK308067.1 [ECO:0000332]
RNAseq introns :: single sample supports all introns SAMEA1965299, SAMEA1968968 [ECO:0000348]
##Evidence-Data-END##
COMPLETENESS: complete on the 3' end.
|
1 61 121 181 241 301 361
| ATGGACAATG CAAGAATGAA CTCCTTCCTG GAATACCCCA TACTTAGCAG TGGCGACTCG GGGACCTGCT CAGCCCGAGC CTACCCCTCG GACCATAGGA TTACAACTTT CCAGTCGTGC GCGGTCAGCG CCAACAGTTG CGGCGGCGAC GACCGCTTCC TAGTGGGCAG GGGGGTGCAG ATCGGTTCGC CCCACCACCA CCACCACCAC CACCATCACC ACCCCCAGCC GGCTACCTAC CAGACTTCCG GGAACCTGGG GGTGTCCTAC TCCCACTCAA GTTGTGGTCC AAGCTATGGC TCACAGAACT TCAGTGCGCC TTACAGCCCC TACGCGTTAA ATCAGGAAGC AGACCCACCA AGAAGCCTGT CGCTCCCCCG CATCGGAGAC ATCTTCTCCA GCGCAGACTT TTGA |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
RefSeq |
NP_705873.2 |
CDS | 95..508 |
Translation | |
Target ORF information:
RefSeq Version | NM_153620.2 |
Organism | Homo sapiens(human) |
Definition | Homo sapiens homeobox A1 (HOXA1), transcript variant 2, mRNA. |
Target ORF information:
Epitope | DYKDDDDK |
Bacterial selection | AMPR |
Mammalian selection | NeoR |
Vector | pcDNA3.1+/C-(K)DYK |
|
NM_153620.2 |
ORF Insert Sequence:
1 61 121 181 241 301 361
| ATGGACAATG CAAGAATGAA CTCCTTCCTG GAATACCCCA TACTTAGCAG TGGCGACTCG GGGACCTGCT CAGCCCGAGC CTACCCCTCG GACCATAGGA TTACAACTTT CCAGTCGTGC GCGGTCAGCG CCAACAGTTG CGGCGGCGAC GACCGCTTCC TAGTGGGCAG GGGGGTGCAG ATCGGTTCGC CCCACCACCA CCACCACCAC CACCATCACC ACCCCCAGCC GGCTACCTAC CAGACTTCCG GGAACCTGGG GGTGTCCTAC TCCCACTCAA GTTGTGGTCC AAGCTATGGC TCACAGAACT TCAGTGCGCC TTACAGCCCC TACGCGTTAA ATCAGGAAGC AGACCCACCA AGAAGCCTGT CGCTCCCCCG CATCGGAGAC ATCTTCTCCA GCGCAGACTT TTGA |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
CloneID |
OHu108650 |
Clone ID Related Accession (Same CDS sequence) |
NM_153620.3
|
Accession Version |
NM_153620.3 Latest version! |
Documents for ORF clone product in default vector |
Sequence Information |
ORF Nucleotide Sequence (Length: 414bp)
Protein sequence
SNP |
Vector |
pcDNA3.1+/C-(K)DYK or customized vector |
User Manual |
Clone information |
Clone Map |
MSDS |
Tag on pcDNA3.1+/C-(K)DYK |
C terminal DYKDDDDK tags |
ORF Insert Method |
CloneEZ™ Seamless cloning technology |
Insert Structure |
linear |
Update Date |
2019-10-13 |
Organism |
Homo sapiens(human) |
Product |
homeobox protein Hox-A1 isoform b |
Comment |
Comment: REVIEWED REFSEQ: This record has been curated by NCBI staff. The reference sequence was derived from AC004079.1. On Jun 2, 2019 this sequence version replaced NM_153620.2.
Publication Note: This RefSeq record includes a subset of the publications that are available for this gene. Please see the Gene record to access additional publications.
##Evidence-Data-START##
Transcript exon combination :: S79871.1, AK308067.1 [ECO:0000332]
RNAseq introns :: single sample supports all introns SAMEA1965299, SAMEA1968968 [ECO:0000348]
##Evidence-Data-END##
COMPLETENESS: complete on the 3' end.
|
1 61 121 181 241 301 361
| ATGGACAATG CAAGAATGAA CTCCTTCCTG GAATACCCCA TACTTAGCAG TGGCGACTCG GGGACCTGCT CAGCCCGAGC CTACCCCTCG GACCATAGGA TTACAACTTT CCAGTCGTGC GCGGTCAGCG CCAACAGTTG CGGCGGCGAC GACCGCTTCC TAGTGGGCAG GGGGGTGCAG ATCGGTTCGC CCCACCACCA CCACCACCAC CACCATCGCC ACCCCCAGCC GGCTACCTAC CAGACTTCCG GGAACCTGGG GGTGTCCTAC TCCCACTCAA GTTGTGGTCC AAGCTATGGC TCACAGAACT TCAGTGCGCC TTACAGCCCC TACGCGTTAA ATCAGGAAGC AGACCCACCA AGAAGCCTGT CGCTCCCCCG CATCGGAGAC ATCTTCTCCA GCGCAGACTT TTGA |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
RefSeq |
NP_705873.3 |
CDS | 89..502 |
Translation | |
Target ORF information:
RefSeq Version | NM_153620.3 |
Organism | Homo sapiens(human) |
Definition | Homo sapiens homeobox A1 (HOXA1), transcript variant 2, mRNA. |
Target ORF information:
Epitope | DYKDDDDK |
Bacterial selection | AMPR |
Mammalian selection | NeoR |
Vector | pcDNA3.1+/C-(K)DYK |
|
NM_153620.3 |
ORF Insert Sequence:
1 61 121 181 241 301 361
| ATGGACAATG CAAGAATGAA CTCCTTCCTG GAATACCCCA TACTTAGCAG TGGCGACTCG GGGACCTGCT CAGCCCGAGC CTACCCCTCG GACCATAGGA TTACAACTTT CCAGTCGTGC GCGGTCAGCG CCAACAGTTG CGGCGGCGAC GACCGCTTCC TAGTGGGCAG GGGGGTGCAG ATCGGTTCGC CCCACCACCA CCACCACCAC CACCATCGCC ACCCCCAGCC GGCTACCTAC CAGACTTCCG GGAACCTGGG GGTGTCCTAC TCCCACTCAA GTTGTGGTCC AAGCTATGGC TCACAGAACT TCAGTGCGCC TTACAGCCCC TACGCGTTAA ATCAGGAAGC AGACCCACCA AGAAGCCTGT CGCTCCCCCG CATCGGAGAC ATCTTCTCCA GCGCAGACTT TTGA |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
CloneID |
OHu109358 |
Clone ID Related Accession (Same CDS sequence) |
NM_005522.5
|
Accession Version |
NM_005522.5 Latest version! |
Documents for ORF clone product in default vector |
Sequence Information |
ORF Nucleotide Sequence (Length: 1008bp)
Protein sequence
SNP |
Vector |
pcDNA3.1+/C-(K)DYK or customized vector |
User Manual |
Clone information |
Clone Map |
MSDS |
Tag on pcDNA3.1+/C-(K)DYK |
C terminal DYKDDDDK tags |
ORF Insert Method |
CloneEZ™ Seamless cloning technology |
Insert Structure |
linear |
Update Date |
2019-12-19 |
Organism |
Homo sapiens(human) |
Product |
homeobox protein Hox-A1 isoform a |
Comment |
Comment: REVIEWED REFSEQ: This record has been curated by NCBI staff. The reference sequence was derived from AC004079.1. On Sep 19, 2019 this sequence version replaced NM_005522.4.
Sequence Note: The RefSeq transcript and protein were derived from genomic sequence to make the sequence consistent with the reference genome assembly. The genomic coordinates used for the transcript record were based on alignments.
Publication Note: This RefSeq record includes a subset of the publications that are available for this gene. Please see the Gene record to access additional publications.
##Evidence-Data-START##
Transcript exon combination :: BC032547.2, S79910.1 [ECO:0000332]
##Evidence-Data-END##
##RefSeq-Attributes-START##
RefSeq Select criteria :: based on manual assertion, conservation, expression, longest protein
##RefSeq-Attributes-END##
COMPLETENESS: complete on the 3' end.
|
1 61 121 181 241 301 361 421 481 541 601 661 721 781 841 901 961
| ATGGACAATG CAAGAATGAA CTCCTTCCTG GAATACCCCA TACTTAGCAG TGGCGACTCG GGGACCTGCT CAGCCCGAGC CTACCCCTCG GACCATAGGA TTACAACTTT CCAGTCGTGC GCGGTCAGCG CCAACAGTTG CGGCGGCGAC GACCGCTTCC TAGTGGGCAG GGGGGTGCAG ATCGGTTCGC CCCACCACCA CCACCACCAC CACCATCGCC ACCCCCAGCC GGCTACCTAC CAGACTTCCG GGAACCTGGG GGTGTCCTAC TCCCACTCAA GTTGTGGTCC AAGCTATGGC TCACAGAACT TCAGTGCGCC TTACAGCCCC TACGCGTTAA ATCAGGAAGC AGACGTAAGT GGTGGGTACC CCCAGTGCGC TCCCGCTGTT TACTCTGGAA ATCTCTCATC TCCCATGGTC CAGCATCACC ACCACCACCA GGGTTATGCT GGGGGCGCGG TGGGCTCGCC TCAATACATT CACCACTCAT ATGGACAGGA GCACCAGAGC CTGGCCCTGG CTACGTATAA TAACTCCTTG TCCCCTCTCC ACGCCAGCCA CCAAGAAGCC TGTCGCTCCC CCGCATCGGA GACATCTTCT CCAGCGCAGA CTTTTGACTG GATGAAAGTC AAAAGAAACC CTCCCAAAAC AGGGAAAGTT GGAGAGTACG GCTACCTGGG TCAACCCAAC GCGGTGCGCA CCAACTTCAC TACCAAGCAG CTCACGGAAC TGGAGAAGGA GTTCCACTTC AACAAGTACC TGACGCGCGC CCGCAGGGTG GAGATCGCTG CATCCCTGCA GCTCAACGAG ACCCAAGTGA AGATCTGGTT CCAGAACCGC CGAATGAAGC AAAAGAAACG TGAGAAGGAG GGTCTCTTGC CCATCTCTCC GGCCACCCCG CCAGGAAACG ACGAGAAGGC CGAGGAATCC TCAGAGAAGT CCAGCTCTTC GCCCTGCGTT CCTTCCCCGG GGTCTTCTAC CTCAGACACT CTGACTACCT CCCACTGA |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
RefSeq |
NP_005513.2 |
CDS | 89..1096 |
Translation | |
Target ORF information:
RefSeq Version | NM_005522.5 |
Organism | Homo sapiens(human) |
Definition | Homo sapiens homeobox A1 (HOXA1), transcript variant 1, mRNA. |
Target ORF information:
Epitope | DYKDDDDK |
Bacterial selection | AMPR |
Mammalian selection | NeoR |
Vector | pcDNA3.1+/C-(K)DYK |
|
NM_005522.5 |
ORF Insert Sequence:
1 61 121 181 241 301 361 421 481 541 601 661 721 781 841 901 961
| ATGGACAATG CAAGAATGAA CTCCTTCCTG GAATACCCCA TACTTAGCAG TGGCGACTCG GGGACCTGCT CAGCCCGAGC CTACCCCTCG GACCATAGGA TTACAACTTT CCAGTCGTGC GCGGTCAGCG CCAACAGTTG CGGCGGCGAC GACCGCTTCC TAGTGGGCAG GGGGGTGCAG ATCGGTTCGC CCCACCACCA CCACCACCAC CACCATCGCC ACCCCCAGCC GGCTACCTAC CAGACTTCCG GGAACCTGGG GGTGTCCTAC TCCCACTCAA GTTGTGGTCC AAGCTATGGC TCACAGAACT TCAGTGCGCC TTACAGCCCC TACGCGTTAA ATCAGGAAGC AGACGTAAGT GGTGGGTACC CCCAGTGCGC TCCCGCTGTT TACTCTGGAA ATCTCTCATC TCCCATGGTC CAGCATCACC ACCACCACCA GGGTTATGCT GGGGGCGCGG TGGGCTCGCC TCAATACATT CACCACTCAT ATGGACAGGA GCACCAGAGC CTGGCCCTGG CTACGTATAA TAACTCCTTG TCCCCTCTCC ACGCCAGCCA CCAAGAAGCC TGTCGCTCCC CCGCATCGGA GACATCTTCT CCAGCGCAGA CTTTTGACTG GATGAAAGTC AAAAGAAACC CTCCCAAAAC AGGGAAAGTT GGAGAGTACG GCTACCTGGG TCAACCCAAC GCGGTGCGCA CCAACTTCAC TACCAAGCAG CTCACGGAAC TGGAGAAGGA GTTCCACTTC AACAAGTACC TGACGCGCGC CCGCAGGGTG GAGATCGCTG CATCCCTGCA GCTCAACGAG ACCCAAGTGA AGATCTGGTT CCAGAACCGC CGAATGAAGC AAAAGAAACG TGAGAAGGAG GGTCTCTTGC CCATCTCTCC GGCCACCCCG CCAGGAAACG ACGAGAAGGC CGAGGAATCC TCAGAGAAGT CCAGCTCTTC GCCCTGCGTT CCTTCCCCGG GGTCTTCTAC CTCAGACACT CTGACTACCT CCCACTGA |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.