Gene Symbol | CNTN3 |
Entrez Gene ID | 5067 |
Full Name | contactin 3 |
Synonyms | BIG-1,PANG,PCS |
General protein information |
|
Gene Type | protein-coding |
Organism | Homo sapiens(human) |
Genome | |
Disorder MIM: |
ORF » Species Summary » Homo sapiens » CNTN3 cDNA ORF clone
gRNAs
Gene Symbol | CNTN3 |
Entrez Gene ID | 5067 |
Full Name | contactin 3 |
Synonyms | BIG-1,PANG,PCS |
General protein information |
|
Gene Type | protein-coding |
Organism | Homo sapiens(human) |
Genome | |
Disorder MIM: |
mRNA | Protein | Name |
---|---|---|
XM_005264757.3 | XP_005264814.1 | contactin-3 isoform X1 |
XM_017006509.1 | XP_016861998.1 | contactin-3 isoform X4 |
XM_011533768.2 | XP_011532070.1 | contactin-3 isoform X2 |
XM_017006508.1 | XP_016861997.1 | contactin-3 isoform X3 |
XM_017006507.1 | XP_016861996.1 | contactin-3 isoform X1 |
NM_020872.2 | NP_065923.1 | contactin-3 precursor |
Homo sapiens (human) | CNTN3 | NP_065923.1 |
Pan troglodytes (chimpanzee) | CNTN3 | XP_526232.2 |
Danio rerio (zebrafish) | cntn3a.2 | XP_001340839.5 |
Danio rerio (zebrafish) | LOC556251 | XP_684096.6 |
Mus musculus (house mouse) | Cntn3 | NP_032805.2 |
Rattus norvegicus (Norway rat) | Cntn3 | NP_062202.1 |
Canis lupus familiaris (dog) | CNTN3 | XP_533761.4 |
Gallus gallus (chicken) | CNTN3 | XP_414433.4 |
Drosophila melanogaster (fruit fly) | Cont | NP_649461.2 |
CNTN3 | XP_001101862.1 | |
Bos taurus (cattle) | CNTN3 | XP_005222733.1 |
Anopheles gambiae (African malaria mosquito) | IGL1 | XP_311153.3 |
Genome-wide association study of smoking behaviours among Bangladeshi adults.
Argos M, Tong L, Pierce BL, Rakibuz-Zaman M, Ahmed A, Islam T, Rahman M, Paul-Brutus R, Rahaman R, Roy S, Jasmine F, Kibriya MG, Ahsan H
Journal of medical genetics51(5)327-33(2014 May)
The genetic architecture of economic and political preferences.
Benjamin DJ, Cesarini D, van der Loos MJ, Dawes CT, Koellinger PD, Magnusson PK, Chabris CF, Conley D, Laibson D, Johannesson M, Visscher PM
Proceedings of the National Academy of Sciences of the United States of America109(21)8026-31(2012 May)
Specific functions of BIG1 and BIG2 in endomembrane organization.
Boal F, Stephens DJ
PloS one5(3)e9898(2010 Mar)
Identification of new putative susceptibility genes for several psychiatric disorders by association analysis of regulatory and non-synonymous SNPs of 306 genes involved in neurotransmission and neurodevelopment.
Gratac?s M, Costas J, de Cid R, Bay?s M, Gonz?lez JR, Baca-Garc?a E, de Diego Y, Fern?ndez-Aranda F, Fern?ndez-Piqueras J, Guitart M, Mart?n-Santos R, Martorell L, Mench?n JM, Roca M, S?iz-Ruiz J, Sanju?n J, Torrens M, Urretavizcaya M, Valero J, Vilella E, Estivill X, Carracedo A,
American journal of medical genetics. Part B, Neuropsychiatric genetics : the official publication of the International Society of Psychiatric Genetics150B(6)808-16(2009 Sep)
Identification of a genetic variant associated with abdominal aortic aneurysms on chromosome 3p12.3 by genome wide association.
Elmore JR, Obmann MA, Kuivaniemi H, Tromp G, Gerhard GS, Franklin DP, Boddy AM, Carey DJ
Journal of vascular surgery49(6)1525-31(2009 Jun)
GeneRIFs: Gene References Into Functions What's a GeneRIF?
Clinical trial of gene-disease association and gene-environment interaction. (HuGE Navigator)
Title: Personalized smoking cessation: interactions between nicotine dose, dependence and quit-success genotype score.
BIG1 and BIG2 have roles in endomembrane organization
Title: Specific functions of BIG1 and BIG2 in endomembrane organization.
Observational study of gene-disease association. (HuGE Navigator)
Title: Identification of new putative susceptibility genes for several psychiatric disorders by association analysis of regulatory and non-synonymous SNPs of 306 genes involved in neurotransmission and neurodevelopment.
Observational study and genome-wide association study of gene-disease association. (HuGE Navigator)
Title: Identification of a genetic variant associated with abdominal aortic aneurysms on chromosome 3p12.3 by genome wide association.
The following CNTN3 gene cDNA ORF clone sequences were retrieved from the NCBI Reference Sequence Database (RefSeq). These sequences represent the protein coding region of the CNTN3 cDNA ORF which is encoded by the open reading frame (ORF) sequence. ORF sequences can be delivered in our standard vector, pcDNA3.1+/C-(K)DYK or the vector of your choice as an expression/transfection-ready ORF clone. Not the clone you want? Click here to find your clone.
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CloneID | OHu59478 | |
Clone ID Related Accession (Same CDS sequence) | XM_017006509.1 | |
Accession Version | XM_017006509.1 Latest version! | Documents for ORF clone product in default vector |
Sequence Information | ORF Nucleotide Sequence (Length: 1761bp) Protein sequence SNP |
|
Vector | pcDNA3.1-C-(k)DYK or customized vector | ![]() |
Clone information | Clone Map | ![]() |
Tag on pcDNA3.1+/C-(K)DYK | C terminal DYKDDDDK tags | |
ORF Insert Method | CloneEZ™ Seamless cloning technology | |
Insert Structure | linear | |
Update Date | 2019-12-05 | |
Organism | Homo sapiens(human) | |
Product | contactin-3 isoform X4 | |
Comment | Comment: MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NC_000003.12) annotated using gene prediction method: Gnomon, supported by mRNA and EST evidence. Also see: Documentation of NCBI's Annotation Process ##Genome-Annotation-Data-START## Annotation Provider :: NCBI Annotation Status :: Updated annotation Annotation Name :: Homo sapiens Updated Annotation Release 109.20191205 Annotation Version :: 109.20191205 Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline Annotation Software Version :: 8.3 Annotation Method :: Best-placed RefSeq; propagated RefSeq model Features Annotated :: Gene; mRNA; CDS; ncRNA ##Genome-Annotation-Data-END## |
1 | ATGCATTACA ACCTTCAGGG TCCCACGAGA AGAATCAGAA TTTCTTTGTT AAACGATGGA |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
RefSeq | XP_016861998.1 |
CDS | 34..1794 |
Translation |
Target ORF information:
Target ORF information:
|
![]() |
1 | ATGCATTACA ACCTTCAGGG TCCCACGAGA AGAATCAGAA TTTCTTTGTT AAACGATGGA |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
CloneID | OHu94242 | |
Clone ID Related Accession (Same CDS sequence) | XM_017006508.1 | |
Accession Version | XM_017006508.1 Latest version! | Documents for ORF clone product in default vector |
Sequence Information | ORF Nucleotide Sequence (Length: 2913bp) Protein sequence SNP |
|
Vector | pcDNA3.1-C-(k)DYK or customized vector | ![]() |
Clone information | Clone Map | ![]() |
Tag on pcDNA3.1+/C-(K)DYK | C terminal DYKDDDDK tags | |
ORF Insert Method | CloneEZ™ Seamless cloning technology | |
Insert Structure | linear | |
Update Date | 2019-12-05 | |
Organism | Homo sapiens(human) | |
Product | contactin-3 isoform X3 | |
Comment | Comment: MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NC_000003.12) annotated using gene prediction method: Gnomon, supported by mRNA and EST evidence. Also see: Documentation of NCBI's Annotation Process ##Genome-Annotation-Data-START## Annotation Provider :: NCBI Annotation Status :: Updated annotation Annotation Name :: Homo sapiens Updated Annotation Release 109.20191205 Annotation Version :: 109.20191205 Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline Annotation Software Version :: 8.3 Annotation Method :: Best-placed RefSeq; propagated RefSeq model Features Annotated :: Gene; mRNA; CDS; ncRNA ##Genome-Annotation-Data-END## |
1 | ATGCGGAGAT GGCAGCTGAA TGGAAGTGAT ATTGATATGA GTATGGAACA TCGTTATAAG |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
RefSeq | XP_016861997.1 |
CDS | 108..3020 |
Translation |
Target ORF information:
Target ORF information:
|
![]() |
1 | ATGCGGAGAT GGCAGCTGAA TGGAAGTGAT ATTGATATGA GTATGGAACA TCGTTATAAG |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
CloneID | OHu37278 | |
Clone ID Related Accession (Same CDS sequence) | XM_005264757.3 , XM_017006507.1 , NM_020872.2 | |
Accession Version | NM_020872.2 Latest version! | Documents for ORF clone product in default vector |
Sequence Information | ORF Nucleotide Sequence (Length: 3087bp) Protein sequence SNP |
|
Vector | pcDNA3.1-C-(k)DYK or customized vector | ![]() |
Clone information | Clone Map | ![]() |
Tag on pcDNA3.1+/C-(K)DYK | C terminal DYKDDDDK tags | |
ORF Insert Method | CloneEZ™ Seamless cloning technology | |
Insert Structure | linear | |
Update Date | 2019-08-05 | |
Organism | Homo sapiens(human) | |
Product | contactin-3 precursor | |
Comment | Comment: VALIDATED REFSEQ: This record has undergone validation or preliminary review. The reference sequence was derived from BC150608.1, AC024222.16, AC016950.8 and AL512746.1. On Dec 23, 2014 this sequence version replaced NM_020872.1. Publication Note: This RefSeq record includes a subset of the publications that are available for this gene. Please see the Gene record to access additional publications. ##Evidence-Data-START## Transcript exon combination :: BC150608.1, SRR1660803.209553.1 [ECO:0000332] RNAseq introns :: mixed/partial sample support SAMEA1965299, SAMEA1966682 [ECO:0000350] ##Evidence-Data-END## ##RefSeq-Attributes-START## RefSeq Select criteria :: based on conservation, expression, longest protein ##RefSeq-Attributes-END## COMPLETENESS: complete on the 3' end. |
1 | ATGATGTTTC CATGGAAACA GTTGATCCTG CTTTCATTCA TTGGCTGCTT AGGAGGTGAG |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
RefSeq | NP_065923.1 |
CDS | 29..3115 |
Translation |
Target ORF information:
Target ORF information:
|
![]() |
1 | ATGATGTTTC CATGGAAACA GTTGATCCTG CTTTCATTCA TTGGCTGCTT AGGAGGTGAG |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
CloneID | OHu37278 | |
Clone ID Related Accession (Same CDS sequence) | XM_005264757.3 , XM_017006507.1 , NM_020872.2 | |
Accession Version | XM_005264757.3 Latest version! | Documents for ORF clone product in default vector |
Sequence Information | ORF Nucleotide Sequence (Length: 3087bp) Protein sequence SNP |
|
Vector | pcDNA3.1-C-(k)DYK or customized vector | ![]() |
Clone information | Clone Map | ![]() |
Tag on pcDNA3.1+/C-(K)DYK | C terminal DYKDDDDK tags | |
ORF Insert Method | CloneEZ™ Seamless cloning technology | |
Insert Structure | linear | |
Update Date | 2019-12-05 | |
Organism | Homo sapiens(human) | |
Product | contactin-3 isoform X1 | |
Comment | Comment: MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NC_000003.12) annotated using gene prediction method: Gnomon, supported by mRNA and EST evidence. Also see: Documentation of NCBI's Annotation Process On Jun 6, 2016 this sequence version replaced XM_005264757.2. ##Genome-Annotation-Data-START## Annotation Provider :: NCBI Annotation Status :: Updated annotation Annotation Name :: Homo sapiens Updated Annotation Release 109.20191205 Annotation Version :: 109.20191205 Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline Annotation Software Version :: 8.3 Annotation Method :: Best-placed RefSeq; propagated RefSeq model Features Annotated :: Gene; mRNA; CDS; ncRNA ##Genome-Annotation-Data-END## |
1 | ATGATGTTTC CATGGAAACA GTTGATCCTG CTTTCATTCA TTGGCTGCTT AGGAGGTGAG |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
RefSeq | XP_005264814.1 |
CDS | 139..3225 |
Translation |
Target ORF information:
Target ORF information:
|
![]() |
1 | ATGATGTTTC CATGGAAACA GTTGATCCTG CTTTCATTCA TTGGCTGCTT AGGAGGTGAG |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
CloneID | OHu37278 | |
Clone ID Related Accession (Same CDS sequence) | XM_005264757.3 , XM_017006507.1 , NM_020872.2 | |
Accession Version | XM_017006507.1 Latest version! | Documents for ORF clone product in default vector |
Sequence Information | ORF Nucleotide Sequence (Length: 3087bp) Protein sequence SNP |
|
Vector | pcDNA3.1-C-(k)DYK or customized vector | ![]() |
Clone information | Clone Map | ![]() |
Tag on pcDNA3.1+/C-(K)DYK | C terminal DYKDDDDK tags | |
ORF Insert Method | CloneEZ™ Seamless cloning technology | |
Insert Structure | linear | |
Update Date | 2019-12-05 | |
Organism | Homo sapiens(human) | |
Product | contactin-3 isoform X1 | |
Comment | Comment: MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NC_000003.12) annotated using gene prediction method: Gnomon, supported by mRNA and EST evidence. Also see: Documentation of NCBI's Annotation Process ##Genome-Annotation-Data-START## Annotation Provider :: NCBI Annotation Status :: Updated annotation Annotation Name :: Homo sapiens Updated Annotation Release 109.20191205 Annotation Version :: 109.20191205 Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline Annotation Software Version :: 8.3 Annotation Method :: Best-placed RefSeq; propagated RefSeq model Features Annotated :: Gene; mRNA; CDS; ncRNA ##Genome-Annotation-Data-END## |
1 | ATGATGTTTC CATGGAAACA GTTGATCCTG CTTTCATTCA TTGGCTGCTT AGGAGGTGAG |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
RefSeq | XP_016861996.1 |
CDS | 709..3795 |
Translation |
Target ORF information:
Target ORF information:
|
![]() |
1 | ATGATGTTTC CATGGAAACA GTTGATCCTG CTTTCATTCA TTGGCTGCTT AGGAGGTGAG |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
CloneID | OHu59477 | |
Clone ID Related Accession (Same CDS sequence) | XM_011533768.2 | |
Accession Version | XM_011533768.2 Latest version! | Documents for ORF clone product in default vector |
Sequence Information | ORF Nucleotide Sequence (Length: 3087bp) Protein sequence SNP |
|
Vector | pcDNA3.1-C-(k)DYK or customized vector | ![]() |
Clone information | Clone Map | ![]() |
Tag on pcDNA3.1+/C-(K)DYK | C terminal DYKDDDDK tags | |
ORF Insert Method | CloneEZ™ Seamless cloning technology | |
Insert Structure | linear | |
Update Date | 2019-12-05 | |
Organism | Homo sapiens(human) | |
Product | contactin-3 isoform X2 | |
Comment | Comment: MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NC_000003.12) annotated using gene prediction method: Gnomon, supported by mRNA and EST evidence. Also see: Documentation of NCBI's Annotation Process On Jun 6, 2016 this sequence version replaced XM_011533768.1. ##Genome-Annotation-Data-START## Annotation Provider :: NCBI Annotation Status :: Updated annotation Annotation Name :: Homo sapiens Updated Annotation Release 109.20191205 Annotation Version :: 109.20191205 Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline Annotation Software Version :: 8.3 Annotation Method :: Best-placed RefSeq; propagated RefSeq model Features Annotated :: Gene; mRNA; CDS; ncRNA ##Genome-Annotation-Data-END## |
1 | ATGCTTGGGA AGGCCTGGCA GGCCCCTAAG AAGGATCTCT GCCCCATCTC AATAGGTGAG |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
RefSeq | XP_011532070.1 |
CDS | 3661..6747 |
Translation |
Target ORF information:
Target ORF information:
|
![]() |
1 | ATGCTTGGGA AGGCCTGGCA GGCCCCTAAG AAGGATCTCT GCCCCATCTC AATAGGTGAG |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
Genome-wide association study of smoking behaviours among Bangladeshi adults. |
The genetic architecture of economic and political preferences. |
Specific functions of BIG1 and BIG2 in endomembrane organization. |
Identification of new putative susceptibility genes for several psychiatric disorders by association analysis of regulatory and non-synonymous SNPs of 306 genes involved in neurotransmission and neurodevelopment. |
Identification of a genetic variant associated with abdominal aortic aneurysms on chromosome 3p12.3 by genome wide association. |