Gene Symbol | SUCO |
Entrez Gene ID | 51430 |
Full Name | SUN domain containing ossification factor |
Synonyms | C1orf9,CH1,OPT,SLP1 |
General protein information |
|
Gene Type | protein-coding |
Organism | Homo sapiens(human) |
Genome |
ORF » Species Summary » Homo sapiens » SUCO cDNA ORF clone
gRNAs
Gene Symbol | SUCO |
Entrez Gene ID | 51430 |
Full Name | SUN domain containing ossification factor |
Synonyms | C1orf9,CH1,OPT,SLP1 |
General protein information |
|
Gene Type | protein-coding |
Organism | Homo sapiens(human) |
Genome |
mRNA | Protein | Name |
---|---|---|
NM_001282751.1 | NP_001269680.1 | SUN domain-containing ossification factor isoform 4 |
NM_014283.5 | NP_055098.1 | SUN domain-containing ossification factor isoform 1 precursor |
NM_001282750.2 | NP_001269679.1 | SUN domain-containing ossification factor isoform 3 precursor |
NM_014283.4 | NP_055098.1 | SUN domain-containing ossification factor isoform 1 precursor |
NM_001282750.1 | NP_001269679.1 | SUN domain-containing ossification factor isoform 3 precursor |
XM_006711374.2 | XP_006711437.1 | SUN domain-containing ossification factor isoform X1 |
XM_006711376.1 | XP_006711439.1 | SUN domain-containing ossification factor isoform X3 |
NM_016227.3 | NP_057311.3 | SUN domain-containing ossification factor isoform 2 |
XM_006711375.2 | XP_006711438.1 | SUN domain-containing ossification factor isoform X2 |
Pan troglodytes (chimpanzee) | SUCO | XP_514000.2 |
Canis lupus familiaris (dog) | SUCO | XP_537192.3 |
Bos taurus (cattle) | SUCO | XP_003587114.2 |
Mus musculus (house mouse) | Suco | NP_766233.2 |
Xenopus tropicalis (tropical clawed frog) | suco | XP_002934197.2 |
SUCO | XP_001100732.1 | |
Rattus norvegicus (Norway rat) | Suco | NP_955435.1 |
Gallus gallus (chicken) | C8H1ORF9 | XP_422229.4 |
Danio rerio (zebrafish) | suco | XP_005160502.1 |
Homo sapiens (human) | SUCO | NP_055098.1 |
Exome sequencing identifies SUCO mutations in mesial temporal lobe epilepsy.
Sha Z, Sha L, Li W, Dou W, Shen Y, Wu L, Xu Q
Neuroscience letters591149-54(2015 Mar)
Osteopotentia regulates osteoblast maturation, bone formation, and skeletal integrity in mice.
Sohaskey ML, Jiang Y, Zhao JJ, Mohr A, Roemer F, Harland RM
The Journal of cell biology189(3)511-25(2010 May)
Global patterns of human DNA sequence variation in a 10-kb region on chromosome 1.
Yu N, Zhao Z, Fu YX, Sambuughin N, Ramsay M, Jenkins T, Leskinen E, Patthy L, Jorde LB, Kuromori T, Li WH
Molecular biology and evolution18(2)214-22(2001 Feb)
The C1orf9 gene encodes a putative transmembrane member of a novel protein family.
R?sok O, Pedeutour F, Odeberg J, Lundeberg J, Aasheim HC
Biochemical and biophysical research communications267(3)855-62(2000 Jan)
GeneRIFs: Gene References Into Functions What's a GeneRIF?
neurons have abnormal development due to lack of SUCO, which may be a generalized-onset epilepsy-related gene
Title: Exome sequencing identifies SUCO mutations in mesial temporal lobe epilepsy.
The following SUCO gene cDNA ORF clone sequences were retrieved from the NCBI Reference Sequence Database (RefSeq). These sequences represent the protein coding region of the SUCO cDNA ORF which is encoded by the open reading frame (ORF) sequence. ORF sequences can be delivered in our standard vector, pcDNA3.1+/C-(K)DYK or the vector of your choice as an expression/transfection-ready ORF clone. Not the clone you want? Click here to find your clone.
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CloneID | OHu00538 | |
Clone ID Related Accession (Same CDS sequence) | NM_001282751.1 | |
Accession Version | NM_001282751.1 Latest version! | Documents for ORF clone product in default vector |
Sequence Information | ORF Nucleotide Sequence (Length: 2076bp) Protein sequence SNP |
|
Vector | pcDNA3.1-C-(k)DYK or customized vector | ![]() |
Clone information | Clone Map | ![]() |
Tag on pcDNA3.1+/C-(K)DYK | C terminal DYKDDDDK tags | |
ORF Insert Method | CloneEZ™ Seamless cloning technology | |
Insert Structure | linear | |
Update Date | 2018-06-29 | |
Organism | Homo sapiens(human) | |
Product | SUN domain-containing ossification factor isoform 4 | |
Comment | Comment: VALIDATED REFSEQ: This record has undergone validation or preliminary review. The reference sequence was derived from DB093941.1, BC144487.1, AL035291.1 and AJ250075.1. On Sep 19, 2013 this sequence version replaced XM_005245253.1. Transcript Variant: This variant (4) contains multiple differences in the 5' UTR and coding region, compared to variant 2. This variant represents translation initiation at a downstream AUG compared to variant 2; the 5'-most initiation codon, as used in variant 2, is associated with a truncated ORF that would render the transcript a candidate for nonsense-mediated decay (NMD). Leaky scanning may allow translation initiation at the downstream AUG. ##Evidence-Data-START## Transcript exon combination :: SRR1660805.197902.1, SRR1660807.99074.1 [ECO:0000332] RNAseq introns :: single sample supports all introns SAMEA1965299, SAMEA1966682 [ECO:0000348] ##Evidence-Data-END## COMPLETENESS: complete on the 3' end. |
1 | ATGGAGCCGT CAACACCAGA TACTCCAAAA GAGAGTCCCA TTGTACAGTT AGTTCAAGAG |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
RefSeq | NP_001269680.1 |
CDS | 1848..3923 |
Translation |
Target ORF information:
Target ORF information:
|
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1 | ATGGAGCCGT CAACACCAGA TACTCCAAAA GAGAGTCCCA TTGTACAGTT AGTTCAAGAG |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
CloneID | OHu05093 | |
Clone ID Related Accession (Same CDS sequence) | NM_001282750.2 , NM_001282750.1 | |
Accession Version | NM_001282750.2 Latest version! | Documents for ORF clone product in default vector |
Sequence Information | ORF Nucleotide Sequence (Length: 2652bp) Protein sequence SNP |
|
Vector | pcDNA3.1-C-(k)DYK or customized vector | ![]() |
Clone information | Clone Map | ![]() |
Tag on pcDNA3.1+/C-(K)DYK | C terminal DYKDDDDK tags | |
ORF Insert Method | CloneEZ™ Seamless cloning technology | |
Insert Structure | linear | |
Update Date | 2019-05-30 | |
Organism | Homo sapiens(human) | |
Product | SUN domain-containing ossification factor isoform 3 precursor | |
Comment | Comment: VALIDATED REFSEQ: This record has undergone validation or preliminary review. The reference sequence was derived from DB093941.1, AK302509.1, AL035291.1 and AJ250075.1. On May 31, 2019 this sequence version replaced NM_001282750.1. Transcript Variant: This variant (3) differs in the 5' UTR, lacks a portion of the 5' and 3' coding region, and initiates translation at a downstream AUG, compared to variant 2. The encoded protein (isoform 3) is shorter than isoform 2. ##Evidence-Data-START## Transcript exon combination :: AK302509.1 [ECO:0000332] RNAseq introns :: mixed/partial sample support SAMEA1965299, SAMEA1966682 [ECO:0000350] ##Evidence-Data-END## COMPLETENESS: complete on the 3' end. |
1 | ATGAAGAAGC ACCGGCGGGC CTTGGCCCTG GTCTCCTGCC TCTTTCTGTG CTCTCTGGTC |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
RefSeq | NP_001269679.1 |
CDS | 287..2938 |
Translation |
Target ORF information:
Target ORF information:
|
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1 | ATGAAGAAGC ACCGGCGGGC CTTGGCCCTG GTCTCCTGCC TCTTTCTGTG CTCTCTGGTC |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
CloneID | OHu05093 | |
Clone ID Related Accession (Same CDS sequence) | NM_001282750.2 , NM_001282750.1 | |
Accession Version | NM_001282750.1 | Documents for ORF clone product in default vector |
Sequence Information | ORF Nucleotide Sequence (Length: 2652bp) Protein sequence SNP |
|
Vector | pcDNA3.1-C-(k)DYK or customized vector | ![]() |
Clone information | Clone Map | ![]() |
Tag on pcDNA3.1+/C-(K)DYK | C terminal DYKDDDDK tags | |
ORF Insert Method | CloneEZ™ Seamless cloning technology | |
Insert Structure | linear | |
Update Date | 2018-06-29 | |
Organism | Homo sapiens(human) | |
Product | SUN domain-containing ossification factor isoform 3 precursor | |
Comment | Comment: VALIDATED REFSEQ: This record has undergone validation or preliminary review. The reference sequence was derived from DB093941.1, AK302509.1, AL035291.1 and AJ250075.1. On Sep 19, 2013 this sequence version replaced XM_005245252.1. Transcript Variant: This variant (3) differs in the 5' UTR, lacks a portion of the 5' and 3' coding region, and initiates translation at a downstream AUG, compared to variant 2. The encoded protein (isoform 3) is shorter than isoform 2. ##Evidence-Data-START## Transcript exon combination :: AK302509.1 [ECO:0000332] RNAseq introns :: mixed/partial sample support SAMEA1965299, SAMEA1966682 [ECO:0000350] ##Evidence-Data-END## COMPLETENESS: complete on the 3' end. |
1 | ATGAAGAAGC ACCGGCGGGC CTTGGCCCTG GTCTCCTGCC TCTTTCTGTG CTCTCTGGTC |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
RefSeq | NP_001269679.1 |
CDS | 319..2970 |
Translation |
Target ORF information:
Target ORF information:
|
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1 | ATGAAGAAGC ACCGGCGGGC CTTGGCCCTG GTCTCCTGCC TCTTTCTGTG CTCTCTGGTC |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
CloneID | OHu06293 | |
Clone ID Related Accession (Same CDS sequence) | NM_014283.5 , NM_014283.4 | |
Accession Version | NM_014283.5 Latest version! | Documents for ORF clone product in default vector |
Sequence Information | ORF Nucleotide Sequence (Length: 3765bp) Protein sequence SNP |
|
Vector | pcDNA3.1-C-(k)DYK or customized vector | ![]() |
Clone information | Clone Map | ![]() |
Tag on pcDNA3.1+/C-(K)DYK | C terminal DYKDDDDK tags | |
ORF Insert Method | CloneEZ™ Seamless cloning technology | |
Insert Structure | linear | |
Update Date | 2019-05-01 | |
Organism | Homo sapiens(human) | |
Product | SUN domain-containing ossification factor isoform 1 precursor | |
Comment | Comment: VALIDATED REFSEQ: This record has undergone validation or preliminary review. The reference sequence was derived from DB093941.1, BC137125.1, AL035291.1 and AJ250075.1. On Nov 23, 2018 this sequence version replaced NM_014283.4. Transcript Variant: This variant (1) differs in the 5' UTR and 5' coding region and initiates translation at a downstream AUG, compared to variant 2. The encoded protein (isoform 1) is shorter than isoform 2. ##Evidence-Data-START## Transcript exon combination :: AJ250075.1, SRR1660807.64791.1 [ECO:0000332] RNAseq introns :: single sample supports all introns SAMEA1965299, SAMEA1966682 [ECO:0000348] ##Evidence-Data-END## ##RefSeq-Attributes-START## MANE Ensembl match :: ENST00000263688.4/ ENSP00000263688.3 RefSeq Select criteria :: based on conservation, expression ##RefSeq-Attributes-END## COMPLETENESS: full length. |
1 | ATGAAGAAGC ACCGGCGGGC CTTGGCCCTG GTCTCCTGCC TCTTTCTGTG CTCTCTGGTC |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
RefSeq | NP_055098.1 |
CDS | 287..4051 |
Translation |
Target ORF information:
Target ORF information:
|
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1 | ATGAAGAAGC ACCGGCGGGC CTTGGCCCTG GTCTCCTGCC TCTTTCTGTG CTCTCTGGTC |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
CloneID | OHu06293 | |
Clone ID Related Accession (Same CDS sequence) | NM_014283.5 , NM_014283.4 | |
Accession Version | NM_014283.4 | Documents for ORF clone product in default vector |
Sequence Information | ORF Nucleotide Sequence (Length: 3765bp) Protein sequence SNP |
|
Vector | pcDNA3.1-C-(k)DYK or customized vector | ![]() |
Clone information | Clone Map | ![]() |
Tag on pcDNA3.1+/C-(K)DYK | C terminal DYKDDDDK tags | |
ORF Insert Method | CloneEZ™ Seamless cloning technology | |
Insert Structure | linear | |
Update Date | 2017-10-01 | |
Organism | Homo sapiens(human) | |
Product | SUN domain-containing ossification factor isoform 1 precursor | |
Comment | Comment: VALIDATED REFSEQ: This record has undergone validation or preliminary review. The reference sequence was derived from DB093941.1, BC137125.1, AL035291.1 and AJ250075.1. On Sep 19, 2013 this sequence version replaced NM_014283.3. Transcript Variant: This variant (1) differs in the 5' UTR and 5' coding region and initiates translation at a downstream AUG, compared to variant 2. The encoded protein (isoform 1) is shorter than isoform 2. ##Evidence-Data-START## Transcript exon combination :: AJ250075.1, SRR1803616.169205.1 [ECO:0000332] RNAseq introns :: single sample supports all introns SAMEA1965299, SAMEA1966682 [ECO:0000348] ##Evidence-Data-END## COMPLETENESS: complete on the 3' end. |
1 | ATGAAGAAGC ACCGGCGGGC CTTGGCCCTG GTCTCCTGCC TCTTTCTGTG CTCTCTGGTC |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
RefSeq | NP_055098.1 |
CDS | 319..4083 |
Translation |
Target ORF information:
Target ORF information:
|
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1 | ATGAAGAAGC ACCGGCGGGC CTTGGCCCTG GTCTCCTGCC TCTTTCTGTG CTCTCTGGTC |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
CloneID | OHu34455 | |
Clone ID Related Accession (Same CDS sequence) | XM_006711374.2 | |
Accession Version | XM_006711374.2 Latest version! | Documents for ORF clone product in default vector |
Sequence Information | ORF Nucleotide Sequence (Length: 3744bp) Protein sequence SNP |
|
Vector | pcDNA3.1-C-(k)DYK or customized vector | ![]() |
Clone information | Clone Map | ![]() |
Tag on pcDNA3.1+/C-(K)DYK | C terminal DYKDDDDK tags | |
ORF Insert Method | CloneEZ™ Seamless cloning technology | |
Insert Structure | linear | |
Update Date | 2019-12-05 | |
Organism | Homo sapiens(human) | |
Product | SUN domain-containing ossification factor isoform X1 | |
Comment | Comment: MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NC_000001.11) annotated using gene prediction method: Gnomon, supported by EST evidence. Also see: Documentation of NCBI's Annotation Process On Jun 6, 2016 this sequence version replaced XM_006711374.1. ##Genome-Annotation-Data-START## Annotation Provider :: NCBI Annotation Status :: Updated annotation Annotation Name :: Homo sapiens Updated Annotation Release 109.20191205 Annotation Version :: 109.20191205 Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline Annotation Software Version :: 8.3 Annotation Method :: Best-placed RefSeq; propagated RefSeq model Features Annotated :: Gene; mRNA; CDS; ncRNA ##Genome-Annotation-Data-END## |
1 | ATGAAGAAGC ACCGGCGGGC CTTGGCCCTG GTCTCCTGCC TCTTTCTGTG CTCTCTGGTC |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
RefSeq | XP_006711437.1 |
CDS | 400..4143 |
Translation |
Target ORF information:
Target ORF information:
|
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1 | ATGAAGAAGC ACCGGCGGGC CTTGGCCCTG GTCTCCTGCC TCTTTCTGTG CTCTCTGGTC |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
CloneID | OHu34456 | |
Clone ID Related Accession (Same CDS sequence) | XM_006711375.2 | |
Accession Version | XM_006711375.2 Latest version! | Documents for ORF clone product in default vector |
Sequence Information | ORF Nucleotide Sequence (Length: 3654bp) Protein sequence SNP |
|
Vector | pcDNA3.1-C-(k)DYK or customized vector | ![]() |
Clone information | Clone Map | ![]() |
Tag on pcDNA3.1+/C-(K)DYK | C terminal DYKDDDDK tags | |
ORF Insert Method | CloneEZ™ Seamless cloning technology | |
Insert Structure | linear | |
Update Date | 2019-12-05 | |
Organism | Homo sapiens(human) | |
Product | SUN domain-containing ossification factor isoform X2 | |
Comment | Comment: MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NC_000001.11) annotated using gene prediction method: Gnomon, supported by EST evidence. Also see: Documentation of NCBI's Annotation Process On Jun 6, 2016 this sequence version replaced XM_006711375.1. ##Genome-Annotation-Data-START## Annotation Provider :: NCBI Annotation Status :: Updated annotation Annotation Name :: Homo sapiens Updated Annotation Release 109.20191205 Annotation Version :: 109.20191205 Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline Annotation Software Version :: 8.3 Annotation Method :: Best-placed RefSeq; propagated RefSeq model Features Annotated :: Gene; mRNA; CDS; ncRNA ##Genome-Annotation-Data-END## |
1 | ATGAAGAAGC ACCGGCGGGC CTTGGCCCTG GTCTCCTGCC TCTTTCTGTG CTCTCTGGTC |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
RefSeq | XP_006711438.1 |
CDS | 400..4053 |
Translation |
Target ORF information:
Target ORF information:
|
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1 | ATGAAGAAGC ACCGGCGGGC CTTGGCCCTG GTCTCCTGCC TCTTTCTGTG CTCTCTGGTC |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
CloneID | OHu34457 | |
Clone ID Related Accession (Same CDS sequence) | XM_006711376.1 | |
Accession Version | XM_006711376.1 Latest version! | Documents for ORF clone product in default vector |
Sequence Information | ORF Nucleotide Sequence (Length: 3633bp) Protein sequence SNP |
|
Vector | pcDNA3.1-C-(k)DYK or customized vector | ![]() |
Clone information | Clone Map | ![]() |
Tag on pcDNA3.1+/C-(K)DYK | C terminal DYKDDDDK tags | |
ORF Insert Method | CloneEZ™ Seamless cloning technology | |
Insert Structure | linear | |
Update Date | 2019-12-05 | |
Organism | Homo sapiens(human) | |
Product | SUN domain-containing ossification factor isoform X3 | |
Comment | Comment: MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NC_000001.11) annotated using gene prediction method: Gnomon, supported by mRNA and EST evidence. Also see: Documentation of NCBI's Annotation Process ##Genome-Annotation-Data-START## Annotation Provider :: NCBI Annotation Status :: Updated annotation Annotation Name :: Homo sapiens Updated Annotation Release 109.20191205 Annotation Version :: 109.20191205 Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline Annotation Software Version :: 8.3 Annotation Method :: Best-placed RefSeq; propagated RefSeq model Features Annotated :: Gene; mRNA; CDS; ncRNA ##Genome-Annotation-Data-END## |
1 | ATGAAGAAGC ACCGGCGGGC CTTGGCCCTG GTCTCCTGCC TCTTTCTGTG CTCTCTGGTC |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
RefSeq | XP_006711439.1 |
CDS | 400..4032 |
Translation |
Target ORF information:
Target ORF information:
|
![]() |
1 | ATGAAGAAGC ACCGGCGGGC CTTGGCCCTG GTCTCCTGCC TCTTTCTGTG CTCTCTGGTC |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
CloneID | OHu11338 | |
Clone ID Related Accession (Same CDS sequence) | NM_016227.3 | |
Accession Version | NM_016227.3 Latest version! | Documents for ORF clone product in default vector |
Sequence Information | ORF Nucleotide Sequence (Length: 4218bp) Protein sequence SNP |
|
Vector | pcDNA3.1-C-(k)DYK or customized vector | ![]() |
Clone information | Clone Map | ![]() |
Tag on pcDNA3.1+/C-(K)DYK | C terminal DYKDDDDK tags | |
ORF Insert Method | CloneEZ™ Seamless cloning technology | |
Insert Structure | linear | |
Update Date | 2018-06-29 | |
Organism | Homo sapiens(human) | |
Product | SUN domain-containing ossification factor isoform 2 | |
Comment | Comment: VALIDATED REFSEQ: This record has undergone validation or preliminary review. The reference sequence was derived from AF097535.1, Z94054.1, AJ250075.1 and AL035291.1. On or before Sep 19, 2013 this sequence version replaced XM_005245250.1, NM_016227.2. Transcript Variant: This variant (2) represents the longest transcript and encodes the longest protein (isoform 1). ##Evidence-Data-START## Transcript exon combination :: AF097535.1 [ECO:0000332] ##Evidence-Data-END## COMPLETENESS: complete on the 3' end. |
1 | ATGAGAGGAT TCTTGGCACG CCCCTTTCTA TCTACCAATC AACATCTAGC TCAATGGGGC |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
RefSeq | NP_057311.3 |
CDS | 125..4342 |
Translation |
Target ORF information:
Target ORF information:
|
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1 | ATGAGAGGAT TCTTGGCACG CCCCTTTCTA TCTACCAATC AACATCTAGC TCAATGGGGC |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
Exome sequencing identifies SUCO mutations in mesial temporal lobe epilepsy. |
Osteopotentia regulates osteoblast maturation, bone formation, and skeletal integrity in mice. |
Global patterns of human DNA sequence variation in a 10-kb region on chromosome 1. |
The C1orf9 gene encodes a putative transmembrane member of a novel protein family. |