Gene Symbol | SMIM11A |
Entrez Gene ID | 54065 |
Full Name | small integral membrane protein 11A |
Synonyms | C21orf51,FAM165B,SMIM11,SMIM11B |
General protein information |
|
Gene Type | protein-coding |
Organism | Homo sapiens(human) |
Genome |
ORF » Species Summary » Homo sapiens » SMIM11A cDNA ORF clone
Gene Symbol | SMIM11A |
Entrez Gene ID | 54065 |
Full Name | small integral membrane protein 11A |
Synonyms | C21orf51,FAM165B,SMIM11,SMIM11B |
General protein information |
|
Gene Type | protein-coding |
Organism | Homo sapiens(human) |
Genome |
mRNA | Protein | Name |
---|---|---|
NM_058182.4 | NP_478062.1 | small integral membrane protein 11A |
XM_017028397.1 | XP_016883886.1 | small integral membrane protein 11A isoform X1 |
XM_017028399.2 | XP_016883888.1 | small integral membrane protein 11A isoform X1 |
NM_058182.5 | NP_478062.1 | small integral membrane protein 11A |
NM_001376899.1 | NP_001363828.1 | small integral membrane protein 11A |
XM_017028398.1 | XP_016883887.1 | small integral membrane protein 11A isoform X1 |
XM_017028399.1 | XP_016883888.1 | small integral membrane protein 11A isoform X1 |
Annotation of human chromosome 21 for relevance to Down syndrome: gene structure and expression analysis.
Gardiner K, Slavov D, Bechtel L, Davisson M
Genomics79(6)833-43(2002 Jun)
From PREDs and open reading frames to cDNA isolation: revisiting the human chromosome 21 transcription map.
Reymond A, Friedli M, Henrichsen CN, Chapot F, Deutsch S, Ucla C, Rossier C, Lyle R, Guipponi M, Antonarakis SE
Genomics78(1-2)46-54(2001 Nov)
Initial assessment of human gene diversity and expression patterns based upon 83 million nucleotides of cDNA sequence.
Adams MD, Kerlavage AR, Fleischmann RD, Fuldner RA, Bult CJ, Lee NH, Kirkness EF, Weinstock KG, Gocayne JD, White O
Nature377(6547 Suppl)3-174(1995 Sep)
GeneRIFs: Gene References Into Functions What's a GeneRIF?
Clinical trial of gene-disease association and gene-environment interaction. (HuGE Navigator)
Title: Personalized smoking cessation: interactions between nicotine dose, dependence and quit-success genotype score.
The following SMIM11A gene cDNA ORF clone sequences were retrieved from the NCBI Reference Sequence Database (RefSeq). These sequences represent the protein coding region of the SMIM11A cDNA ORF which is encoded by the open reading frame (ORF) sequence. ORF sequences can be delivered in our standard vector, pcDNA3.1+/C-(K)DYK or the vector of your choice as an expression/transfection-ready ORF clone. Not the clone you want? Click here to find your clone.
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CloneID | OHu31229 | |
Clone ID Related Accession (Same CDS sequence) | NM_058182.4 , XM_017028397.1 , XM_017028399.2 , NM_058182.5 , NM_001376899.1 , XM_017028398.1 , XM_017028399.1 | |
Accession Version | NM_058182.4 | Documents for ORF clone product in default vector |
Sequence Information | ORF Nucleotide Sequence (Length: 177bp) Protein sequence SNP |
|
Vector | pcDNA3.1-C-(k)DYK or customized vector | User Manual |
Clone information | Clone Map | MSDS |
Tag on pcDNA3.1+/C-(K)DYK | C terminal DYKDDDDK tags | |
ORF Insert Method | CloneEZ™ Seamless cloning technology | |
Insert Structure | linear | |
Update Date | 2019-07-05 | |
Organism | Homo sapiens(human) | |
Product | small integral membrane protein 11A | |
Comment | Comment: VALIDATED REFSEQ: This record has undergone validation or preliminary review. The reference sequence was derived from BI460535.1, AP000320.1, BC015596.2 and BM989806.1. On or before Jun 22, 2007 this sequence version replaced NM_001042401.1, NM_058182.3. ##Evidence-Data-START## Transcript exon combination :: SRR1163658.481316.1, SRR1163658.259543.1 [ECO:0000332] RNAseq introns :: single sample supports all introns SAMEA1965299, SAMEA1966682 [ECO:0000348] ##Evidence-Data-END## ##RefSeq-Attributes-START## RefSeq Select criteria :: based on single protein-coding transcript ##RefSeq-Attributes-END## COMPLETENESS: complete on the 3' end. |
1 | ATGAATTGGA AGGTTCTTGA GCACGTGCCC CTGCTGCTGT ATATCTTGGC AGCAAAAACA |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
RefSeq | NP_478062.1 |
CDS | 196..372 |
Translation |
Target ORF information:
Target ORF information:
|
NM_058182.4 |
1 | ATGAATTGGA AGGTTCTTGA GCACGTGCCC CTGCTGCTGT ATATCTTGGC AGCAAAAACA |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
CloneID | OHu31229 | |
Clone ID Related Accession (Same CDS sequence) | NM_058182.4 , XM_017028397.1 , XM_017028399.2 , NM_058182.5 , NM_001376899.1 , XM_017028398.1 , XM_017028399.1 | |
Accession Version | NM_058182.5 Latest version! | Documents for ORF clone product in default vector |
Sequence Information | ORF Nucleotide Sequence (Length: 177bp) Protein sequence SNP |
|
Vector | pcDNA3.1-C-(k)DYK or customized vector | User Manual |
Clone information | Clone Map | MSDS |
Tag on pcDNA3.1+/C-(K)DYK | C terminal DYKDDDDK tags | |
ORF Insert Method | CloneEZ™ Seamless cloning technology | |
Insert Structure | linear | |
Update Date | 2019-12-19 | |
Organism | Homo sapiens(human) | |
Product | small integral membrane protein 11A | |
Comment | Comment: VALIDATED REFSEQ: This record has undergone validation or preliminary review. The reference sequence was derived from AP000320.1 and AP000321.1. On Nov 22, 2019 this sequence version replaced NM_058182.4. ##Evidence-Data-START## Transcript exon combination :: SRR5189658.175550.1, ERR1172418.563.1 [ECO:0000332] ##Evidence-Data-END## ##RefSeq-Attributes-START## RefSeq Select criteria :: based on conservation, expression, longest protein ##RefSeq-Attributes-END## COMPLETENESS: complete on the 3' end. |
1 | ATGAATTGGA AGGTTCTTGA GCACGTGCCC CTGCTGCTGT ATATCTTGGC AGCAAAAACA |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
RefSeq | NP_478062.1 |
CDS | 139..315 |
Translation |
Target ORF information:
Target ORF information:
|
NM_058182.5 |
1 | ATGAATTGGA AGGTTCTTGA GCACGTGCCC CTGCTGCTGT ATATCTTGGC AGCAAAAACA |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
CloneID | OHu31229 | |
Clone ID Related Accession (Same CDS sequence) | NM_058182.4 , XM_017028397.1 , XM_017028399.2 , NM_058182.5 , NM_001376899.1 , XM_017028398.1 , XM_017028399.1 | |
Accession Version | NM_001376899.1 Latest version! | Documents for ORF clone product in default vector |
Sequence Information | ORF Nucleotide Sequence (Length: 177bp) Protein sequence SNP |
|
Vector | pcDNA3.1-C-(k)DYK or customized vector | User Manual |
Clone information | Clone Map | MSDS |
Tag on pcDNA3.1+/C-(K)DYK | C terminal DYKDDDDK tags | |
ORF Insert Method | CloneEZ™ Seamless cloning technology | |
Insert Structure | linear | |
Update Date | 2019-11-21 | |
Organism | Homo sapiens(human) | |
Product | small integral membrane protein 11A | |
Comment | Comment: VALIDATED REFSEQ: This record has undergone validation or preliminary review. The reference sequence was derived from AP000320.1 and AP000321.1. ##Evidence-Data-START## Transcript exon combination :: SRR7346977.73593.1, SRR3476690.737884.1 [ECO:0000332] ##Evidence-Data-END## |
1 | ATGAATTGGA AGGTTCTTGA GCACGTGCCC CTGCTGCTGT ATATCTTGGC AGCAAAAACA |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
RefSeq | NP_001363828.1 |
CDS | 751..927 |
Translation |
Target ORF information:
Target ORF information:
|
NM_001376899.1 |
1 | ATGAATTGGA AGGTTCTTGA GCACGTGCCC CTGCTGCTGT ATATCTTGGC AGCAAAAACA |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
CloneID | OHu31229 | |
Clone ID Related Accession (Same CDS sequence) | NM_058182.4 , XM_017028397.1 , XM_017028399.2 , NM_058182.5 , NM_001376899.1 , XM_017028398.1 , XM_017028399.1 | |
Accession Version | XM_017028397.1 Latest version! | Documents for ORF clone product in default vector |
Sequence Information | ORF Nucleotide Sequence (Length: 177bp) Protein sequence SNP |
|
Vector | pcDNA3.1-C-(k)DYK or customized vector | User Manual |
Clone information | Clone Map | MSDS |
Tag on pcDNA3.1+/C-(K)DYK | C terminal DYKDDDDK tags | |
ORF Insert Method | CloneEZ™ Seamless cloning technology | |
Insert Structure | linear | |
Update Date | 2018-03-25 | |
Organism | Homo sapiens(human) | |
Product | small integral membrane protein 11A isoform X1 | |
Comment | Comment: MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NC_000021.9) annotated using gene prediction method: Gnomon, supported by EST evidence. Also see: Documentation of NCBI's Annotation Process ##Genome-Annotation-Data-START## Annotation Provider :: NCBI Annotation Status :: Full annotation Annotation Name :: Homo sapiens Annotation Release 109 Annotation Version :: 109 Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline Annotation Software Version :: 8.0 Annotation Method :: Best-placed RefSeq; Gnomon Features Annotated :: Gene; mRNA; CDS; ncRNA ##Genome-Annotation-Data-END## |
1 | ATGAATTGGA AGGTTCTTGA GCACGTGCCC CTGCTGCTGT ATATCTTGGC AGCAAAAACA |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
RefSeq | XP_016883886.1 |
CDS | 155..331 |
Translation |
Target ORF information:
Target ORF information:
|
XM_017028397.1 |
1 | ATGAATTGGA AGGTTCTTGA GCACGTGCCC CTGCTGCTGT ATATCTTGGC AGCAAAAACA |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
CloneID | OHu31229 | |
Clone ID Related Accession (Same CDS sequence) | NM_058182.4 , XM_017028397.1 , XM_017028399.2 , NM_058182.5 , NM_001376899.1 , XM_017028398.1 , XM_017028399.1 | |
Accession Version | XM_017028399.2 Latest version! | Documents for ORF clone product in default vector |
Sequence Information | ORF Nucleotide Sequence (Length: 177bp) Protein sequence SNP |
|
Vector | pcDNA3.1-C-(k)DYK or customized vector | User Manual |
Clone information | Clone Map | MSDS |
Tag on pcDNA3.1+/C-(K)DYK | C terminal DYKDDDDK tags | |
ORF Insert Method | CloneEZ™ Seamless cloning technology | |
Insert Structure | linear | |
Update Date | 2018-03-25 | |
Organism | Homo sapiens(human) | |
Product | small integral membrane protein 11A isoform X1 | |
Comment | Comment: MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NC_000021.9) annotated using gene prediction method: Gnomon, supported by EST evidence. Also see: Documentation of NCBI's Annotation Process On Mar 26, 2018 this sequence version replaced XM_017028399.1. ##Genome-Annotation-Data-START## Annotation Provider :: NCBI Annotation Status :: Full annotation Annotation Name :: Homo sapiens Annotation Release 109 Annotation Version :: 109 Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline Annotation Software Version :: 8.0 Annotation Method :: Best-placed RefSeq; Gnomon Features Annotated :: Gene; mRNA; CDS; ncRNA ##Genome-Annotation-Data-END## |
1 | ATGAATTGGA AGGTTCTTGA GCACGTGCCC CTGCTGCTGT ATATCTTGGC AGCAAAAACA |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
RefSeq | XP_016883888.1 |
CDS | 704..880 |
Translation |
Target ORF information:
Target ORF information:
|
XM_017028399.2 |
1 | ATGAATTGGA AGGTTCTTGA GCACGTGCCC CTGCTGCTGT ATATCTTGGC AGCAAAAACA |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
CloneID | OHu31229 | |
Clone ID Related Accession (Same CDS sequence) | NM_058182.4 , XM_017028397.1 , XM_017028399.2 , NM_058182.5 , NM_001376899.1 , XM_017028398.1 , XM_017028399.1 | |
Accession Version | XM_017028398.1 Latest version! | Documents for ORF clone product in default vector |
Sequence Information | ORF Nucleotide Sequence (Length: 177bp) Protein sequence SNP |
|
Vector | pcDNA3.1-C-(k)DYK or customized vector | User Manual |
Clone information | Clone Map | MSDS |
Tag on pcDNA3.1+/C-(K)DYK | C terminal DYKDDDDK tags | |
ORF Insert Method | CloneEZ™ Seamless cloning technology | |
Insert Structure | linear | |
Update Date | 2018-03-25 | |
Organism | Homo sapiens(human) | |
Product | small integral membrane protein 11A isoform X1 | |
Comment | Comment: MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NC_000021.9) annotated using gene prediction method: Gnomon, supported by EST evidence. Also see: Documentation of NCBI's Annotation Process ##Genome-Annotation-Data-START## Annotation Provider :: NCBI Annotation Status :: Full annotation Annotation Name :: Homo sapiens Annotation Release 109 Annotation Version :: 109 Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline Annotation Software Version :: 8.0 Annotation Method :: Best-placed RefSeq; Gnomon Features Annotated :: Gene; mRNA; CDS; ncRNA ##Genome-Annotation-Data-END## |
1 | ATGAATTGGA AGGTTCTTGA GCACGTGCCC CTGCTGCTGT ATATCTTGGC AGCAAAAACA |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
RefSeq | XP_016883887.1 |
CDS | 155..331 |
Translation |
Target ORF information:
Target ORF information:
|
XM_017028398.1 |
1 | ATGAATTGGA AGGTTCTTGA GCACGTGCCC CTGCTGCTGT ATATCTTGGC AGCAAAAACA |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
CloneID | OHu31229 | |
Clone ID Related Accession (Same CDS sequence) | NM_058182.4 , XM_017028397.1 , XM_017028399.2 , NM_058182.5 , NM_001376899.1 , XM_017028398.1 , XM_017028399.1 | |
Accession Version | XM_017028399.1 | Documents for ORF clone product in default vector |
Sequence Information | ORF Nucleotide Sequence (Length: 177bp) Protein sequence SNP |
|
Vector | pcDNA3.1-C-(k)DYK or customized vector | User Manual |
Clone information | Clone Map | MSDS |
Tag on pcDNA3.1+/C-(K)DYK | C terminal DYKDDDDK tags | |
ORF Insert Method | CloneEZ™ Seamless cloning technology | |
Insert Structure | linear | |
Update Date | 2016-06-05 | |
Organism | Homo sapiens(human) | |
Product | small integral membrane protein 11A isoform X1 | |
Comment | Comment: MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NC_000021.9) annotated using gene prediction method: Gnomon, supported by EST evidence. Also see: Documentation of NCBI's Annotation Process ##Genome-Annotation-Data-START## Annotation Provider :: NCBI Annotation Status :: Full annotation Annotation Version :: Homo sapiens Annotation Release 108 Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline Annotation Software Version :: 7.0 Annotation Method :: Best-placed RefSeq; Gnomon Features Annotated :: Gene; mRNA; CDS; ncRNA ##Genome-Annotation-Data-END## |
1 | ATGAATTGGA AGGTTCTTGA GCACGTGCCC CTGCTGCTGT ATATCTTGGC AGCAAAAACA |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
RefSeq | XP_016883888.1 |
CDS | 704..880 |
Translation |
Target ORF information:
Target ORF information:
|
XM_017028399.1 |
1 | ATGAATTGGA AGGTTCTTGA GCACGTGCCC CTGCTGCTGT ATATCTTGGC AGCAAAAACA |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
Annotation of human chromosome 21 for relevance to Down syndrome: gene structure and expression analysis. |
From PREDs and open reading frames to cDNA isolation: revisiting the human chromosome 21 transcription map. |
Initial assessment of human gene diversity and expression patterns based upon 83 million nucleotides of cDNA sequence. |