Gene Symbol | RBM27 |
Entrez Gene ID | 54439 |
Full Name | RNA binding motif protein 27 |
Synonyms | ARRS1,Psc1,ZC3H18,ZC3H20 |
General protein information |
|
Gene Type | protein-coding |
Organism | Homo sapiens(human) |
Genome |
ORF » Species Summary » Homo sapiens » RBM27 cDNA ORF clone
Gene Symbol | RBM27 |
Entrez Gene ID | 54439 |
Full Name | RNA binding motif protein 27 |
Synonyms | ARRS1,Psc1,ZC3H18,ZC3H20 |
General protein information |
|
Gene Type | protein-coding |
Organism | Homo sapiens(human) |
Genome |
mRNA | Protein | Name |
---|---|---|
XM_005268466.1 | XP_005268523.1 | RNA-binding protein 27 isoform X1 |
XM_006714787.1 | XP_006714850.1 | RNA-binding protein 27 isoform X2 |
XM_005268467.1 | XP_005268524.1 | RNA-binding protein 27 isoform X4 |
NM_018989.1 | NP_061862.1 | RNA-binding protein 27 |
NM_018989.2 | NP_061862.1 | RNA-binding protein 27 |
XM_017009587.1 | XP_016865076.1 | RNA-binding protein 27 isoform X3 |
XM_011537661.1 | XP_011535963.1 | RNA-binding protein 27 isoform X6 |
XM_005268468.1 | XP_005268525.1 | RNA-binding protein 27 isoform X5 |
XM_011537662.1 | XP_011535964.1 | RNA-binding protein 27 isoform X7 |
Mus musculus (house mouse) | Rbm27 | NP_766214.2 |
Xenopus tropicalis (tropical clawed frog) | rbm27 | XP_002935312.2 |
Bos taurus (cattle) | RBM27 | NP_001180101.1 |
Gallus gallus (chicken) | RBM27 | XP_004945104.1 |
RBM27 | XP_001100227.1 | |
Canis lupus familiaris (dog) | RBM27 | XP_005617405.1 |
Rattus norvegicus (Norway rat) | Rbm27 | XP_006254739.1 |
Homo sapiens (human) | RBM27 | NP_061862.1 |
Pan troglodytes (chimpanzee) | RBM27 | XP_527062.2 |
Danio rerio (zebrafish) | rbm27 | XP_005167991.1 |
Insights into RNA biology from an atlas of mammalian mRNA-binding proteins.
Castello A, Fischer B, Eichelbaum K, Horos R, Beckmann BM, Strein C, Davey NE, Humphreys DT, Preiss T, Steinmetz LM, Krijgsveld J, Hentze MW
Cell149(6)1393-406(2012 Jun)
The mRNA-bound proteome and its global occupancy profile on protein-coding transcripts.
Baltz AG, Munschauer M, Schwanh?usser B, Vasile A, Murakawa Y, Schueler M, Youngs N, Penfold-Brown D, Drew K, Milek M, Wyler E, Bonneau R, Selbach M, Dieterich C, Landthaler M
Molecular cell46(5)674-90(2012 Jun)
A probability-based approach for high-throughput protein phosphorylation analysis and site localization.
Beausoleil SA, Vill?n J, Gerber SA, Rush J, Gygi SP
Nature biotechnology24(10)1285-92(2006 Oct)
A family of RS domain proteins with novel subcellular localization and trafficking.
Kavanagh SJ, Schulz TC, Davey P, Claudianos C, Russell C, Rathjen PD
Nucleic acids research33(4)1309-22(2005)
The DNA sequence and comparative analysis of human chromosome 5.
Schmutz J, Martin J, Terry A, Couronne O, Grimwood J, Lowry S, Gordon LA, Scott D, Xie G, Huang W, Hellsten U, Tran-Gyamfi M, She X, Prabhakar S, Aerts A, Altherr M, Bajorek E, Black S, Branscomb E, Caoile C, Challacombe JF, Chan YM, Denys M, Detter JC, Escobar J, Flowers D, Fotopulos D, Glavina T, Gomez M, Gonzales E, Goodstein D, Grigoriev I, Groza M, Hammon N, Hawkins T, Haydu L, Israni S, Jett J, Kadner K, Kimball H, Kobayashi A, Lopez F, Lou Y, Martinez D, Medina C, Morgan J, Nandkeshwar R, Noonan JP, Pitluck S, Pollard M, Predki P, Priest J, Ramirez L, Retterer J, Rodriguez A, Rogers S, Salamov A, Salazar A, Thayer N, Tice H, Tsai M, Ustaszewska A, Vo N, Wheeler J, Wu K, Yang J, Dickson M, Cheng JF, Eichler EE, Olsen A, Pennacchio LA, Rokhsar DS, Richardson P, Lucas SM, Myers RM, Rubin EM
Nature431(7006)268-74(2004 Sep)
GeneRIFs: Gene References Into Functions What's a GeneRIF?
Clinical trial of gene-disease association and gene-environment interaction. (HuGE Navigator)
Title: Personalized smoking cessation: interactions between nicotine dose, dependence and quit-success genotype score.
The following RBM27 gene cDNA ORF clone sequences were retrieved from the NCBI Reference Sequence Database (RefSeq). These sequences represent the protein coding region of the RBM27 cDNA ORF which is encoded by the open reading frame (ORF) sequence. ORF sequences can be delivered in our standard vector, pcDNA3.1+/C-(K)DYK or the vector of your choice as an expression/transfection-ready ORF clone. Not the clone you want? Click here to find your clone.
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CloneID | OHu68307 | |
Clone ID Related Accession (Same CDS sequence) | XM_011537661.1 | |
Accession Version | XM_011537661.1 Latest version! | Documents for ORF clone product in default vector |
Sequence Information | ORF Nucleotide Sequence (Length: 2889bp) Protein sequence SNP |
|
Vector | pcDNA3.1-C-(k)DYK or customized vector | User Manual |
Clone information | Clone Map | MSDS |
Tag on pcDNA3.1+/C-(K)DYK | C terminal DYKDDDDK tags | |
ORF Insert Method | CloneEZ™ Seamless cloning technology | |
Insert Structure | linear | |
Update Date | 2019-12-05 | |
Organism | Homo sapiens(human) | |
Product | RNA-binding protein 27 isoform X6 | |
Comment | Comment: MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NC_000005.10) annotated using gene prediction method: Gnomon, supported by mRNA and EST evidence. Also see: Documentation of NCBI's Annotation Process ##Genome-Annotation-Data-START## Annotation Provider :: NCBI Annotation Status :: Updated annotation Annotation Name :: Homo sapiens Updated Annotation Release 109.20191205 Annotation Version :: 109.20191205 Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline Annotation Software Version :: 8.3 Annotation Method :: Best-placed RefSeq; propagated RefSeq model Features Annotated :: Gene; mRNA; CDS; ncRNA ##Genome-Annotation-Data-END## |
1 | ATGCTCATAG AGGATGTGGA TGCCCTCAAG TCCTGGCTGG CCAAGTTACT GGAGCCGATA |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
RefSeq | XP_011535963.1 |
CDS | 217..3105 |
Translation |
Target ORF information:
Target ORF information:
|
XM_011537661.1 |
1 | ATGCTCATAG AGGATGTGGA TGCCCTCAAG TCCTGGCTGG CCAAGTTACT GGAGCCGATA |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
CloneID | OHu68308 | |
Clone ID Related Accession (Same CDS sequence) | XM_011537662.1 | |
Accession Version | XM_011537662.1 Latest version! | Documents for ORF clone product in default vector |
Sequence Information | ORF Nucleotide Sequence (Length: 2886bp) Protein sequence SNP |
|
Vector | pcDNA3.1-C-(k)DYK or customized vector | User Manual |
Clone information | Clone Map | MSDS |
Tag on pcDNA3.1+/C-(K)DYK | C terminal DYKDDDDK tags | |
ORF Insert Method | CloneEZ™ Seamless cloning technology | |
Insert Structure | linear | |
Update Date | 2019-12-05 | |
Organism | Homo sapiens(human) | |
Product | RNA-binding protein 27 isoform X7 | |
Comment | Comment: MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NC_000005.10) annotated using gene prediction method: Gnomon, supported by mRNA and EST evidence. Also see: Documentation of NCBI's Annotation Process ##Genome-Annotation-Data-START## Annotation Provider :: NCBI Annotation Status :: Updated annotation Annotation Name :: Homo sapiens Updated Annotation Release 109.20191205 Annotation Version :: 109.20191205 Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline Annotation Software Version :: 8.3 Annotation Method :: Best-placed RefSeq; propagated RefSeq model Features Annotated :: Gene; mRNA; CDS; ncRNA ##Genome-Annotation-Data-END## |
1 | ATGCTCATAG AGGATGTGGA TGCCCTCAAG TCCTGGCTGG CCAAGTTACT GGAGCCGATA |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
RefSeq | XP_011535964.1 |
CDS | 217..3102 |
Translation |
Target ORF information:
Target ORF information:
|
XM_011537662.1 |
1 | ATGCTCATAG AGGATGTGGA TGCCCTCAAG TCCTGGCTGG CCAAGTTACT GGAGCCGATA |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
CloneID | OHu02383 | |
Clone ID Related Accession (Same CDS sequence) | NM_018989.1 , NM_018989.2 | |
Accession Version | NM_018989.1 | Documents for ORF clone product in default vector |
Sequence Information | ORF Nucleotide Sequence (Length: 3183bp) Protein sequence SNP |
|
Vector | pcDNA3.1-C-(k)DYK or customized vector | User Manual |
Clone information | Clone Map | MSDS |
Tag on pcDNA3.1+/C-(K)DYK | C terminal DYKDDDDK tags | |
ORF Insert Method | CloneEZ™ Seamless cloning technology | |
Insert Structure | linear | |
Update Date | 2017-10-01 | |
Organism | Homo sapiens(human) | |
Product | RNA-binding protein 27 | |
Comment | Comment: VALIDATED REFSEQ: This record has undergone validation or preliminary review. The reference sequence was derived from BX647384.1, AB037732.1 and AL833706.1. On or before Mar 29, 2008 this sequence version replaced XM_001723796.1, XM_001723897.1, XM_001720239.1. ##Evidence-Data-START## Transcript exon combination :: BX647384.1, SRR1803617.98509.1 [ECO:0000332] RNAseq introns :: single sample supports all introns SAMEA1965299, SAMEA1966682 [ECO:0000348] ##Evidence-Data-END## |
1 | ATGCTCATAG AGGATGTGGA TGCCCTCAAG TCCTGGCTGG CCAAGTTACT GGAGCCGATA |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
RefSeq | NP_061862.1 |
CDS | 167..3349 |
Translation |
Target ORF information:
Target ORF information:
|
NM_018989.1 |
1 | ATGCTCATAG AGGATGTGGA TGCCCTCAAG TCCTGGCTGG CCAAGTTACT GGAGCCGATA |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
CloneID | OHu02383 | |
Clone ID Related Accession (Same CDS sequence) | NM_018989.1 , NM_018989.2 | |
Accession Version | NM_018989.2 Latest version! | Documents for ORF clone product in default vector |
Sequence Information | ORF Nucleotide Sequence (Length: 3183bp) Protein sequence SNP |
|
Vector | pcDNA3.1-C-(k)DYK or customized vector | User Manual |
Clone information | Clone Map | MSDS |
Tag on pcDNA3.1+/C-(K)DYK | C terminal DYKDDDDK tags | |
ORF Insert Method | CloneEZ™ Seamless cloning technology | |
Insert Structure | linear | |
Update Date | 2019-05-01 | |
Organism | Homo sapiens(human) | |
Product | RNA-binding protein 27 | |
Comment | Comment: VALIDATED REFSEQ: This record has undergone validation or preliminary review. The reference sequence was derived from BX647384.1, AB037732.1 and AL833706.1. On Nov 22, 2018 this sequence version replaced NM_018989.1. ##Evidence-Data-START## Transcript exon combination :: SRR1803617.98509.1, BX647384.1 [ECO:0000332] RNAseq introns :: single sample supports all introns SAMEA1965299, SAMEA1966682 [ECO:0000348] ##Evidence-Data-END## ##RefSeq-Attributes-START## MANE Ensembl match :: ENST00000265271.7/ ENSP00000265271.5 RefSeq Select criteria :: based on conservation, expression ##RefSeq-Attributes-END## COMPLETENESS: full length. |
1 | ATGCTCATAG AGGATGTGGA TGCCCTCAAG TCCTGGCTGG CCAAGTTACT GGAGCCGATA |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
RefSeq | NP_061862.1 |
CDS | 162..3344 |
Translation |
Target ORF information:
Target ORF information:
|
NM_018989.2 |
1 | ATGCTCATAG AGGATGTGGA TGCCCTCAAG TCCTGGCTGG CCAAGTTACT GGAGCCGATA |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
CloneID | OHu39878 | |
Clone ID Related Accession (Same CDS sequence) | XM_005268466.1 | |
Accession Version | XM_005268466.1 Latest version! | Documents for ORF clone product in default vector |
Sequence Information | ORF Nucleotide Sequence (Length: 3186bp) Protein sequence SNP |
|
Vector | pcDNA3.1-C-(k)DYK or customized vector | User Manual |
Clone information | Clone Map | MSDS |
Tag on pcDNA3.1+/C-(K)DYK | C terminal DYKDDDDK tags | |
ORF Insert Method | CloneEZ™ Seamless cloning technology | |
Insert Structure | linear | |
Update Date | 2019-12-05 | |
Organism | Homo sapiens(human) | |
Product | RNA-binding protein 27 isoform X1 | |
Comment | Comment: MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NC_000005.10) annotated using gene prediction method: Gnomon, supported by mRNA and EST evidence. Also see: Documentation of NCBI's Annotation Process ##Genome-Annotation-Data-START## Annotation Provider :: NCBI Annotation Status :: Updated annotation Annotation Name :: Homo sapiens Updated Annotation Release 109.20191205 Annotation Version :: 109.20191205 Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline Annotation Software Version :: 8.3 Annotation Method :: Best-placed RefSeq; propagated RefSeq model Features Annotated :: Gene; mRNA; CDS; ncRNA ##Genome-Annotation-Data-END## |
1 | ATGCTCATAG AGGATGTGGA TGCCCTCAAG TCCTGGCTGG CCAAGTTACT GGAGCCGATA |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
RefSeq | XP_005268523.1 |
CDS | 217..3402 |
Translation |
Target ORF information:
Target ORF information:
|
XM_005268466.1 |
1 | ATGCTCATAG AGGATGTGGA TGCCCTCAAG TCCTGGCTGG CCAAGTTACT GGAGCCGATA |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
CloneID | OHu39880 | |
Clone ID Related Accession (Same CDS sequence) | XM_005268467.1 | |
Accession Version | XM_005268467.1 Latest version! | Documents for ORF clone product in default vector |
Sequence Information | ORF Nucleotide Sequence (Length: 3021bp) Protein sequence SNP |
|
Vector | pcDNA3.1-C-(k)DYK or customized vector | User Manual |
Clone information | Clone Map | MSDS |
Tag on pcDNA3.1+/C-(K)DYK | C terminal DYKDDDDK tags | |
ORF Insert Method | CloneEZ™ Seamless cloning technology | |
Insert Structure | linear | |
Update Date | 2019-12-05 | |
Organism | Homo sapiens(human) | |
Product | RNA-binding protein 27 isoform X4 | |
Comment | Comment: MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NC_000005.10) annotated using gene prediction method: Gnomon, supported by mRNA and EST evidence. Also see: Documentation of NCBI's Annotation Process ##Genome-Annotation-Data-START## Annotation Provider :: NCBI Annotation Status :: Updated annotation Annotation Name :: Homo sapiens Updated Annotation Release 109.20191205 Annotation Version :: 109.20191205 Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline Annotation Software Version :: 8.3 Annotation Method :: Best-placed RefSeq; propagated RefSeq model Features Annotated :: Gene; mRNA; CDS; ncRNA ##Genome-Annotation-Data-END## |
1 | ATGCTCATAG AGGATGTGGA TGCCCTCAAG TCCTGGCTGG CCAAGTTACT GGAGCCGATA |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
RefSeq | XP_005268524.1 |
CDS | 217..3237 |
Translation |
Target ORF information:
Target ORF information:
|
XM_005268467.1 |
1 | ATGCTCATAG AGGATGTGGA TGCCCTCAAG TCCTGGCTGG CCAAGTTACT GGAGCCGATA |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
CloneID | OHu39881 | |
Clone ID Related Accession (Same CDS sequence) | XM_005268468.1 | |
Accession Version | XM_005268468.1 Latest version! | Documents for ORF clone product in default vector |
Sequence Information | ORF Nucleotide Sequence (Length: 3018bp) Protein sequence SNP |
|
Vector | pcDNA3.1-C-(k)DYK or customized vector | User Manual |
Clone information | Clone Map | MSDS |
Tag on pcDNA3.1+/C-(K)DYK | C terminal DYKDDDDK tags | |
ORF Insert Method | CloneEZ™ Seamless cloning technology | |
Insert Structure | linear | |
Update Date | 2019-12-05 | |
Organism | Homo sapiens(human) | |
Product | RNA-binding protein 27 isoform X5 | |
Comment | Comment: MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NC_000005.10) annotated using gene prediction method: Gnomon, supported by mRNA and EST evidence. Also see: Documentation of NCBI's Annotation Process ##Genome-Annotation-Data-START## Annotation Provider :: NCBI Annotation Status :: Updated annotation Annotation Name :: Homo sapiens Updated Annotation Release 109.20191205 Annotation Version :: 109.20191205 Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline Annotation Software Version :: 8.3 Annotation Method :: Best-placed RefSeq; propagated RefSeq model Features Annotated :: Gene; mRNA; CDS; ncRNA ##Genome-Annotation-Data-END## |
1 | ATGCTCATAG AGGATGTGGA TGCCCTCAAG TCCTGGCTGG CCAAGTTACT GGAGCCGATA |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
RefSeq | XP_005268525.1 |
CDS | 217..3234 |
Translation |
Target ORF information:
Target ORF information:
|
XM_005268468.1 |
1 | ATGCTCATAG AGGATGTGGA TGCCCTCAAG TCCTGGCTGG CCAAGTTACT GGAGCCGATA |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
CloneID | OHu95923 | |
Clone ID Related Accession (Same CDS sequence) | XM_017009587.1 | |
Accession Version | XM_017009587.1 Latest version! | Documents for ORF clone product in default vector |
Sequence Information | ORF Nucleotide Sequence (Length: 3147bp) Protein sequence SNP |
|
Vector | pcDNA3.1-C-(k)DYK or customized vector | User Manual |
Clone information | Clone Map | MSDS |
Tag on pcDNA3.1+/C-(K)DYK | C terminal DYKDDDDK tags | |
ORF Insert Method | CloneEZ™ Seamless cloning technology | |
Insert Structure | linear | |
Update Date | 2019-12-05 | |
Organism | Homo sapiens(human) | |
Product | RNA-binding protein 27 isoform X3 | |
Comment | Comment: MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NC_000005.10) annotated using gene prediction method: Gnomon, supported by mRNA and EST evidence. Also see: Documentation of NCBI's Annotation Process ##Genome-Annotation-Data-START## Annotation Provider :: NCBI Annotation Status :: Updated annotation Annotation Name :: Homo sapiens Updated Annotation Release 109.20191205 Annotation Version :: 109.20191205 Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline Annotation Software Version :: 8.3 Annotation Method :: Best-placed RefSeq; propagated RefSeq model Features Annotated :: Gene; mRNA; CDS; ncRNA ##Genome-Annotation-Data-END## |
1 | ATGCTCATAG AGGATGTGGA TGCCCTCAAG TCCTGGCTGG CCAAGTTACT GGAGCCGATA |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
RefSeq | XP_016865076.1 |
CDS | 217..3363 |
Translation |
Target ORF information:
Target ORF information:
|
XM_017009587.1 |
1 | ATGCTCATAG AGGATGTGGA TGCCCTCAAG TCCTGGCTGG CCAAGTTACT GGAGCCGATA |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
CloneID | OHu39879 | |
Clone ID Related Accession (Same CDS sequence) | XM_006714787.1 | |
Accession Version | XM_006714787.1 Latest version! | Documents for ORF clone product in default vector |
Sequence Information | ORF Nucleotide Sequence (Length: 3150bp) Protein sequence SNP |
|
Vector | pcDNA3.1-C-(k)DYK or customized vector | User Manual |
Clone information | Clone Map | MSDS |
Tag on pcDNA3.1+/C-(K)DYK | C terminal DYKDDDDK tags | |
ORF Insert Method | CloneEZ™ Seamless cloning technology | |
Insert Structure | linear | |
Update Date | 2019-12-05 | |
Organism | Homo sapiens(human) | |
Product | RNA-binding protein 27 isoform X2 | |
Comment | Comment: MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NC_000005.10) annotated using gene prediction method: Gnomon, supported by mRNA and EST evidence. Also see: Documentation of NCBI's Annotation Process ##Genome-Annotation-Data-START## Annotation Provider :: NCBI Annotation Status :: Updated annotation Annotation Name :: Homo sapiens Updated Annotation Release 109.20191205 Annotation Version :: 109.20191205 Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline Annotation Software Version :: 8.3 Annotation Method :: Best-placed RefSeq; propagated RefSeq model Features Annotated :: Gene; mRNA; CDS; ncRNA ##Genome-Annotation-Data-END## |
1 | ATGCTCATAG AGGATGTGGA TGCCCTCAAG TCCTGGCTGG CCAAGTTACT GGAGCCGATA |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
RefSeq | XP_006714850.1 |
CDS | 217..3366 |
Translation |
Target ORF information:
Target ORF information:
|
XM_006714787.1 |
1 | ATGCTCATAG AGGATGTGGA TGCCCTCAAG TCCTGGCTGG CCAAGTTACT GGAGCCGATA |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
Insights into RNA biology from an atlas of mammalian mRNA-binding proteins. |
The mRNA-bound proteome and its global occupancy profile on protein-coding transcripts. |
A probability-based approach for high-throughput protein phosphorylation analysis and site localization. |
A family of RS domain proteins with novel subcellular localization and trafficking. |
The DNA sequence and comparative analysis of human chromosome 5. |