Gene Symbol
NUP107
Entrez Gene ID
57122
Full Name
nucleoporin 107
Synonyms
NPHS11,NUP84
General protein information
Preferred Namesnucleoporin 107
Namesnuclear pore complex protein Nup107 nucleoporin 107kDa
Gene Type
protein-coding
Organism
Homo sapiens(human)
Genome
Chromosome: 12
Map Location: 12q15
Summary
This gene encodes a member of the nucleoporin family. The protein is localized to the nuclear rim and is an essential component of the nuclear pore complex (NPC). All molecules entering or leaving the nucleus either diffuse through or are actively transported by the NPC. Alternate transcriptional splice variants of this gene have been observed but have not been thoroughly characterized. [provided by RefSeq, Jul 2008].
Disorder MIM:
607617
Disorder Html:
Nephrotic syndrome, type 11, 616730 (3)
mRNA and Protein(s)
mRNA
Protein
Name
XM_005269037.3
XP_005269094.1
nuclear pore complex protein Nup107 isoform X1
NM_020401.4
NP_065134.1
nuclear pore complex protein Nup107 isoform 1
NM_001330192.1
NP_001317121.1
nuclear pore complex protein Nup107 isoform 2
NM_001330192.2
NP_001317121.1
nuclear pore complex protein Nup107 isoform 2
XM_005269037.4
XP_005269094.1
nuclear pore complex protein Nup107 isoform X1
NM_020401.3
NP_065134.1
nuclear pore complex protein Nup107 isoform 1
Homo sapiens (human)
NUP107
NP_065134.1
Pan troglodytes (chimpanzee)
NUP107
XP_001153762.1
Mus musculus (house mouse)
Nup107
NP_598771.1
Canis lupus familiaris (dog)
NUP107
XP_531670.3
Drosophila melanogaster (fruit fly)
Nup107
NP_609446.1
NUP107
XP_001117201.1
Danio rerio (zebrafish)
nup107
NP_001025338.1
Bos taurus (cattle)
NUP107
XP_002687439.1
Gallus gallus (chicken)
NUP107
XP_004937621.1
Rattus norvegicus (Norway rat)
Nup107
NP_446282.2
Anopheles gambiae (African malaria mosquito)
AgaP_AGAP001685
XP_001238474.3
Xenopus tropicalis (tropical clawed frog)
nup107
XP_004912994.1
Related articles in PubMed
Single nucleotide variant in Nucleoporin 107 may be predictive of sensitivity to chemotherapy in patients with ovarian cancer.
Alanee S, Delfino K, Wilber A, Robinson K, Brard L, Semaan A Pharmacogenetics and genomics27(7)264-269(2017 Jul)
Homozygous mutation in
Rosti RO, Sotak BN, Bielas SL, Bhat G, Silhavy JL, Aslanger AD, Altunoglu U, Bilge I, Tasdemir M, Yzaguirrem AD, Musaev D, Infante S, Thuong W, Marin-Valencia I, Nelson SF, Kayserili H, Gleeson JG Journal of medical genetics54(6)399-403(2017 Jun)
Systematic Protein-Protein Interaction Analysis Reveals Intersubcomplex Contacts in the Nuclear Pore Complex.
Apelt L, Knockenhauer KE, Leksa NC, Benlasfer N, Schwartz TU, Stelzl U Molecular & cellular proteomics : MCP15(8)2594-606(2016 08)
GeneRIFs: Gene References Into Functions What's a GeneRIF?
The following NUP107 gene cDNA ORF clone sequences were retrieved from the NCBI Reference Sequence Database (RefSeq). These sequences represent the protein coding region of the NUP107 cDNA ORF which is encoded by the open reading frame (ORF) sequence. ORF sequences can be delivered in our standard vector, pcDNA3.1+ /C-(K)DYK or the vector of your choice as an expression/transfection-ready ORF clone. Not the clone you want? Click here to find your clone.
CloneID
OHu70318
Clone ID Related Accession (Same CDS sequence)
NM_001330192.1
, NM_001330192.2
Accession Version
NM_001330192.1
Documents for ORF clone product in default vector
Sequence Information
ORF Nucleotide Sequence (Length: 2691bp)
Protein sequence
SNP
Vector
pcDNA3.1+ /C-(K)DYK or customized vector
User Manual
Clone information
Clone Map
MSDS
Tag on pcDNA3.1+ /C-(K)DYK
C terminal DYKDDDDK tags
ORF Insert Method
CloneEZ™ Seamless cloning technology
Insert Structure
linear
Update Date
2019-02-02
Organism
Homo sapiens(human)
Product
nuclear pore complex protein Nup107 isoform 2
Comment
Comment: REVIEWED REFSEQ: This record has been curated by NCBI staff. The reference sequence was derived from AJ295745.1, AC124890.8 and BE326877.1. On Aug 19, 2016 this sequence version replaced XM_011538576.1.
Transcript Variant: This variant (2) uses an alternate splice site in its 5' coding region which also results in a longer 5' UTR compared to variant 1. This variant represents translation initiation at an alternate start codon compared to variant 1; the 5'-most initiation codon, as used in variant 1, is associated with a truncated ORF that would render the transcript a candidate for nonsense-mediated decay (NMD). Leaky scanning may allow translation initiation at the downstream start codon to encode an isoform (2) that has a shorter and distinct N-terminus, compared to isoform 1.
Sequence Note: This RefSeq record was created from transcript and genomic sequence data to make the sequence consistent with the reference genome assembly. The genomic coordinates used for the transcript record were based on transcript alignments.
Publication Note: This RefSeq record includes a subset of the publications that are available for this gene. Please see the Gene record to access additional publications.
##Evidence-Data-START##
Transcript exon combination :: SRR1803611.36966.1, SRR1660807.222692.1 [ECO:0000332]
RNAseq introns :: single sample supports all introns SAMEA1965299, SAMEA1968968 [ECO:0000348]
##Evidence-Data-END##
COMPLETENESS: complete on the 3' end.
1 61 121 181 241 301 361 421 481 541 601 661 721 781 841 901 961 1021 1081 1141 1201 1261 1321 1381 1441 1501 1561 1621 1681 1741 1801 1861 1921 1981 2041 2101 2161 2221 2281 2341 2401 2461 2521 2581 2641 ATGAAAATTT TGGTAATACT ACACCAAGAA ACCAGGTTAT CCCTCGAACT CCTAGCTCAT TTCGACAGCC TTGTTCTTTC TACCAACCTT TTGTTTATAG TTACCCCAAC AAGCCGAAGC TTACTAAGGC AGCCAGATAT TTCCTGCATT CTTGGAACAG GAGGGAAGTC GCCCCGACTT ACGCAGTCTT CAGGGTTCTT TGGAAATCTC TCCATGGTTA CTAATCTGGA TGACAGTAAC TGGGCAGCTG CATTTTCATC ACAGCGTTCC GGGCTGTTCA CAAACACAGA GCCCCACAGT ATAACAGAAG ATGTAACTAT CAGTGCTGTT ATGTTACGTG AGGATGATCC TGGAGAAGCT GCATCCATGA GTATGTTTTC TGATTTCCTG CAGTCTTTTC TGAAGCACTC TTCGAGTACA GTTTTTGATC TTGTGGAAGA GTATGAAAAC ATCTGTGGTA GTCAGGTGAA TATACTGAGT AAAATAGTGA GTCGAGCAAC ACCTGGACTT CAAAAATTTT CAAAAACAGC CAGTATGCTC TGGCTTCTTC AACAGGAGAT GGTCACATGG AGGCTGCTGG CTTCTTTGTA TAGAGACAGA ATACAGTCTG CATTAGAAGA GGAAAGTGTA TTCGCAGTTA CTGCTGTTAA TGCCAGTGAA AAAACAGTTG TGGAAGCGTT ATTTCAGAGG GATTCACTTG TTCGACAAAG TCAGCTGGTG GTAGATTGGT TAGAGAGTAT TGCCAAAGAT GAAATTGGAG AATTTTCTGA TAATATTGAG TTTTATGCAA AATCAGTATA TTGGGAAAAT ACTCTGCATA CCTTAAAACA ACGGCAGCTG ACTTCTTACG TTGGAAGTGT TCGTCCGCTT GTCACTGAAT TGGACCCTGA TGCTCCCATA AGACAGAAAA TGCCCCTTGA TGATCTGGAT AGAGAAGATG AAGTTAGATT ACTCAAATAT CTCTTTACTC TAATCCGTGC TGGAATGACA GAAGAGGCAC AACGACTCTG TAAACGCTGT GGTCAAGCAT GGAGAGCTGC AACACTTGAA GGCTGGAAAC TGTACCATGA CCCTAATGTT AATGGAGGAA CAGAATTAGA ACCTGTTGAA GGGAATCCAT ATAGACGCAT TTGGAAAATA AGTTGCTGGA GAATGGCAGA AGATGAGCTT TTTAATAGAT ACGAGAGAGC AATTTATGCA GCTTTAAGTG GGAATCTTAA GCAGCTGCTT CCTGTCTGTG ACACCTGGGA AGACACAGTT TGGGCCTACT TCCGGGTGAT GGTGGACAGT CTGGTAGAAC AGGAGATCCA GACATCAGTA GCAACTCTGG ATGAAACTGA AGAACTCCCT AGAGAATATC TGGGAGCAAA CTGGACGTTA GAAAAGGTTT TTGAGGAACT TCAAGCTACT GACAAAAAGA GAGTTCTGGA AGAGAATCAA GAACATTATC ATATAGTTCA AAAGTTTCTT ATCCTGGGAG ACATTGATGG TTTGATGGAT GAGTTTAGCA AATGGCTTTC CAAAAGCAGA AACAATCTAC CTGGACACCT GCTTCGCTTT ATGACTCACC TTATTTTGTT TTTCCGTACT CTGGGACTAC AGACCAAGGA GGAAGTTTCT ATTGAAGTTT TAAAGACATA CATACAGCTT TTAATAAGAG AGAAACATAC AAATCTTATA GCATTTTATA CCTGTCATTT GCCTCAAGAC CTAGCTGTTG CCCAGTATGC ATTATTTTTG GAAAGTGTTA CAGAATTTGA ACAGCGCCAC CATTGCCTGG AGTTGGCTAA AGAAGCAGAT TTGGATGTTG CAACAATAAC AAAAACTGTA GTTGAGAATA TTCGAAAGAA AGATAATGGT GAATTTAGTC ATCATGACCT GGCCCCAGCC CTAGATACTG GCACTACTGA GGAGGATCGT TTAAAAATTG ATGTAATTGA CTGGTTGGTA TTTGACCCAG CGCAGAGGGC AGAAGCACTG AAACAAGGCA ATGCAATTAT GAGAAAATTC TTGGCATCAA AAAAGCACGA AGCTGCAAAA GAAGTATTTG TGAAAATTCC TCAGGATTCT ATAGCAGAAA TCTATAATCA GTGCGAGGAA CAAGGAATGG AAAGTCCACT TCCTGCTGAA GATGATAATG CTATCCGAGA ACATTTGTGC ATCAGAGCTT ATTTGGAAGC CCATGAAACC TTTAATGAGT GGTTTAAGCA TATGAATTCA GTTCCACAAA AACCTGCTTT GATACCTCAA CCAACTTTTA CTGAGAAAGT GGCTCATGAA CACAAAGAAA AGAAATATGA AATGGATTTT GGTATTTGGA AAGGGCATTT GGATGCCCTA ACTGCTGATG TGAAGGAGAA AATGTATAAC GTCTTGTTGT TTGTTGATGG AGGGTGGATG GTGGATGTTA GAGAGGATGC CAAAGAAGAC CATGAAAGAA CACATCAAAT GGTCTTACTG AGAAAGCTTT GTCTGCCAAT GTTGTGTTTT CTGCTTCATA CGATATTGCA CAGTACTGGT CAGTATCAGG AATGCCTACA GTTAGCAGAT ATGGTATCCT CTGAGCGCCA CAAACTGTAC CTGGTATTTT CTAAGGAAGA GCTAAGGAAG TTGCTGCAGA AGCTCAGAGA GTCCTCTCTA ATGCTCCTAG ACCAGGGACT TGACCCATTA GGGTATGAAA TTCAGTTATA G
The stop codons will be deleted if pcDNA3.1+ /C-(K)DYK vector is selected.
RefSeq
NP_001317121.1
CDS 231..2921
Translation
Target ORF information:
RefSeq Version NM_001330192.1
Organism Homo sapiens(human)
Definition Homo sapiens nucleoporin 107 (NUP107), transcript variant 2, mRNA.
Target ORF information:
Epitope DYKDDDDK
Bacterial selection AMPR
Mammalian selection NeoR
Vector pcDNA3.1+ /C-(K)DYK
NM_001330192.1
ORF Insert Sequence:
1 61 121 181 241 301 361 421 481 541 601 661 721 781 841 901 961 1021 1081 1141 1201 1261 1321 1381 1441 1501 1561 1621 1681 1741 1801 1861 1921 1981 2041 2101 2161 2221 2281 2341 2401 2461 2521 2581 2641 ATGAAAATTT TGGTAATACT ACACCAAGAA ACCAGGTTAT CCCTCGAACT CCTAGCTCAT TTCGACAGCC TTGTTCTTTC TACCAACCTT TTGTTTATAG TTACCCCAAC AAGCCGAAGC TTACTAAGGC AGCCAGATAT TTCCTGCATT CTTGGAACAG GAGGGAAGTC GCCCCGACTT ACGCAGTCTT CAGGGTTCTT TGGAAATCTC TCCATGGTTA CTAATCTGGA TGACAGTAAC TGGGCAGCTG CATTTTCATC ACAGCGTTCC GGGCTGTTCA CAAACACAGA GCCCCACAGT ATAACAGAAG ATGTAACTAT CAGTGCTGTT ATGTTACGTG AGGATGATCC TGGAGAAGCT GCATCCATGA GTATGTTTTC TGATTTCCTG CAGTCTTTTC TGAAGCACTC TTCGAGTACA GTTTTTGATC TTGTGGAAGA GTATGAAAAC ATCTGTGGTA GTCAGGTGAA TATACTGAGT AAAATAGTGA GTCGAGCAAC ACCTGGACTT CAAAAATTTT CAAAAACAGC CAGTATGCTC TGGCTTCTTC AACAGGAGAT GGTCACATGG AGGCTGCTGG CTTCTTTGTA TAGAGACAGA ATACAGTCTG CATTAGAAGA GGAAAGTGTA TTCGCAGTTA CTGCTGTTAA TGCCAGTGAA AAAACAGTTG TGGAAGCGTT ATTTCAGAGG GATTCACTTG TTCGACAAAG TCAGCTGGTG GTAGATTGGT TAGAGAGTAT TGCCAAAGAT GAAATTGGAG AATTTTCTGA TAATATTGAG TTTTATGCAA AATCAGTATA TTGGGAAAAT ACTCTGCATA CCTTAAAACA ACGGCAGCTG ACTTCTTACG TTGGAAGTGT TCGTCCGCTT GTCACTGAAT TGGACCCTGA TGCTCCCATA AGACAGAAAA TGCCCCTTGA TGATCTGGAT AGAGAAGATG AAGTTAGATT ACTCAAATAT CTCTTTACTC TAATCCGTGC TGGAATGACA GAAGAGGCAC AACGACTCTG TAAACGCTGT GGTCAAGCAT GGAGAGCTGC AACACTTGAA GGCTGGAAAC TGTACCATGA CCCTAATGTT AATGGAGGAA CAGAATTAGA ACCTGTTGAA GGGAATCCAT ATAGACGCAT TTGGAAAATA AGTTGCTGGA GAATGGCAGA AGATGAGCTT TTTAATAGAT ACGAGAGAGC AATTTATGCA GCTTTAAGTG GGAATCTTAA GCAGCTGCTT CCTGTCTGTG ACACCTGGGA AGACACAGTT TGGGCCTACT TCCGGGTGAT GGTGGACAGT CTGGTAGAAC AGGAGATCCA GACATCAGTA GCAACTCTGG ATGAAACTGA AGAACTCCCT AGAGAATATC TGGGAGCAAA CTGGACGTTA GAAAAGGTTT TTGAGGAACT TCAAGCTACT GACAAAAAGA GAGTTCTGGA AGAGAATCAA GAACATTATC ATATAGTTCA AAAGTTTCTT ATCCTGGGAG ACATTGATGG TTTGATGGAT GAGTTTAGCA AATGGCTTTC CAAAAGCAGA AACAATCTAC CTGGACACCT GCTTCGCTTT ATGACTCACC TTATTTTGTT TTTCCGTACT CTGGGACTAC AGACCAAGGA GGAAGTTTCT ATTGAAGTTT TAAAGACATA CATACAGCTT TTAATAAGAG AGAAACATAC AAATCTTATA GCATTTTATA CCTGTCATTT GCCTCAAGAC CTAGCTGTTG CCCAGTATGC ATTATTTTTG GAAAGTGTTA CAGAATTTGA ACAGCGCCAC CATTGCCTGG AGTTGGCTAA AGAAGCAGAT TTGGATGTTG CAACAATAAC AAAAACTGTA GTTGAGAATA TTCGAAAGAA AGATAATGGT GAATTTAGTC ATCATGACCT GGCCCCAGCC CTAGATACTG GCACTACTGA GGAGGATCGT TTAAAAATTG ATGTAATTGA CTGGTTGGTA TTTGACCCAG CGCAGAGGGC AGAAGCACTG AAACAAGGCA ATGCAATTAT GAGAAAATTC TTGGCATCAA AAAAGCACGA AGCTGCAAAA GAAGTATTTG TGAAAATTCC TCAGGATTCT ATAGCAGAAA TCTATAATCA GTGCGAGGAA CAAGGAATGG AAAGTCCACT TCCTGCTGAA GATGATAATG CTATCCGAGA ACATTTGTGC ATCAGAGCTT ATTTGGAAGC CCATGAAACC TTTAATGAGT GGTTTAAGCA TATGAATTCA GTTCCACAAA AACCTGCTTT GATACCTCAA CCAACTTTTA CTGAGAAAGT GGCTCATGAA CACAAAGAAA AGAAATATGA AATGGATTTT GGTATTTGGA AAGGGCATTT GGATGCCCTA ACTGCTGATG TGAAGGAGAA AATGTATAAC GTCTTGTTGT TTGTTGATGG AGGGTGGATG GTGGATGTTA GAGAGGATGC CAAAGAAGAC CATGAAAGAA CACATCAAAT GGTCTTACTG AGAAAGCTTT GTCTGCCAAT GTTGTGTTTT CTGCTTCATA CGATATTGCA CAGTACTGGT CAGTATCAGG AATGCCTACA GTTAGCAGAT ATGGTATCCT CTGAGCGCCA CAAACTGTAC CTGGTATTTT CTAAGGAAGA GCTAAGGAAG TTGCTGCAGA AGCTCAGAGA GTCCTCTCTA ATGCTCCTAG ACCAGGGACT TGACCCATTA GGGTATGAAA TTCAGTTATA G
The stop codons will be deleted if pcDNA3.1+ /C-(K)DYK vector is selected.
CloneID
OHu70318
Clone ID Related Accession (Same CDS sequence)
NM_001330192.1
, NM_001330192.2
Accession Version
NM_001330192.2 Latest version!
Documents for ORF clone product in default vector
Sequence Information
ORF Nucleotide Sequence (Length: 2691bp)
Protein sequence
SNP
Vector
pcDNA3.1+ /C-(K)DYK or customized vector
User Manual
Clone information
Clone Map
MSDS
Tag on pcDNA3.1+ /C-(K)DYK
C terminal DYKDDDDK tags
ORF Insert Method
CloneEZ™ Seamless cloning technology
Insert Structure
linear
Update Date
2019-09-27
Organism
Homo sapiens(human)
Product
nuclear pore complex protein Nup107 isoform 2
Comment
Comment: REVIEWED REFSEQ: This record has been curated by NCBI staff. The reference sequence was derived from AJ295745.1, AC124890.8 and BE326877.1. On May 31, 2019 this sequence version replaced NM_001330192.1.
Transcript Variant: This variant (2) uses an alternate splice site in its 5' coding region which also results in a longer 5' UTR compared to variant 1. This variant represents translation initiation at an alternate start codon compared to variant 1; the 5'-most initiation codon, as used in variant 1, is associated with a truncated ORF that would render the transcript a candidate for nonsense-mediated decay (NMD). Leaky scanning may allow translation initiation at the downstream start codon to encode an isoform (2) that has a shorter and distinct N-terminus, compared to isoform 1.
Sequence Note: This RefSeq record was created from transcript and genomic sequence data to make the sequence consistent with the reference genome assembly. The genomic coordinates used for the transcript record were based on transcript alignments.
Publication Note: This RefSeq record includes a subset of the publications that are available for this gene. Please see the Gene record to access additional publications.
##Evidence-Data-START##
Transcript exon combination :: SRR1803611.36966.1, SRR1660807.222692.1 [ECO:0000332]
RNAseq introns :: single sample supports all introns SAMEA1965299, SAMEA1968968 [ECO:0000348]
##Evidence-Data-END##
COMPLETENESS: complete on the 3' end.
1 61 121 181 241 301 361 421 481 541 601 661 721 781 841 901 961 1021 1081 1141 1201 1261 1321 1381 1441 1501 1561 1621 1681 1741 1801 1861 1921 1981 2041 2101 2161 2221 2281 2341 2401 2461 2521 2581 2641 ATGAAAATTT TGGTAATACT ACACCAAGAA ACCAGGTTAT CCCTCGAACT CCTAGCTCAT TTCGACAGCC TTGTTCTTTC TACCAACCTT TTGTTTATAG TTACCCCAAC AAGCCGAAGC TTACTAAGGC AGCCAGATAT TTCCTGCATT CTTGGAACAG GAGGGAAGTC GCCCCGACTT ACGCAGTCTT CAGGGTTCTT TGGAAATCTC TCCATGGTTA CTAATCTGGA TGACAGTAAC TGGGCAGCTG CATTTTCATC ACAGCGTTCC GGGCTGTTCA CAAACACAGA GCCCCACAGT ATAACAGAAG ATGTAACTAT CAGTGCTGTT ATGTTACGTG AGGATGATCC TGGAGAAGCT GCATCCATGA GTATGTTTTC TGATTTCCTG CAGTCTTTTC TGAAGCACTC TTCGAGTACA GTTTTTGATC TTGTGGAAGA GTATGAAAAC ATCTGTGGTA GTCAGGTGAA TATACTGAGT AAAATAGTGA GTCGAGCAAC ACCTGGACTT CAAAAATTTT CAAAAACAGC CAGTATGCTC TGGCTTCTTC AACAGGAGAT GGTCACATGG AGGCTGCTGG CTTCTTTGTA TAGAGACAGA ATACAGTCTG CATTAGAAGA GGAAAGTGTA TTCGCAGTTA CTGCTGTTAA TGCCAGTGAA AAAACAGTTG TGGAAGCGTT ATTTCAGAGG GATTCACTTG TTCGACAAAG TCAGCTGGTG GTAGATTGGT TAGAGAGTAT TGCCAAAGAT GAAATTGGAG AATTTTCTGA TAATATTGAG TTTTATGCAA AATCAGTATA TTGGGAAAAT ACTCTGCATA CCTTAAAACA ACGGCAGCTG ACTTCTTACG TTGGAAGTGT TCGTCCGCTT GTCACTGAAT TGGACCCTGA TGCTCCCATA AGACAGAAAA TGCCCCTTGA TGATCTGGAT AGAGAAGATG AAGTTAGATT ACTCAAATAT CTCTTTACTC TAATCCGTGC TGGAATGACA GAAGAGGCAC AACGACTCTG TAAACGCTGT GGTCAAGCAT GGAGAGCTGC AACACTTGAA GGCTGGAAAC TGTACCATGA CCCTAATGTT AATGGAGGAA CAGAATTAGA ACCTGTTGAA GGGAATCCAT ATAGACGCAT TTGGAAAATA AGTTGCTGGA GAATGGCAGA AGATGAGCTT TTTAATAGAT ACGAGAGAGC AATTTATGCA GCTTTAAGTG GGAATCTTAA GCAGCTGCTT CCTGTCTGTG ACACCTGGGA AGACACAGTT TGGGCCTACT TCCGGGTGAT GGTGGACAGT CTGGTAGAAC AGGAGATCCA GACATCAGTA GCAACTCTGG ATGAAACTGA AGAACTCCCT AGAGAATATC TGGGAGCAAA CTGGACGTTA GAAAAGGTTT TTGAGGAACT TCAAGCTACT GACAAAAAGA GAGTTCTGGA AGAGAATCAA GAACATTATC ATATAGTTCA AAAGTTTCTT ATCCTGGGAG ACATTGATGG TTTGATGGAT GAGTTTAGCA AATGGCTTTC CAAAAGCAGA AACAATCTAC CTGGACACCT GCTTCGCTTT ATGACTCACC TTATTTTGTT TTTCCGTACT CTGGGACTAC AGACCAAGGA GGAAGTTTCT ATTGAAGTTT TAAAGACATA CATACAGCTT TTAATAAGAG AGAAACATAC AAATCTTATA GCATTTTATA CCTGTCATTT GCCTCAAGAC CTAGCTGTTG CCCAGTATGC ATTATTTTTG GAAAGTGTTA CAGAATTTGA ACAGCGCCAC CATTGCCTGG AGTTGGCTAA AGAAGCAGAT TTGGATGTTG CAACAATAAC AAAAACTGTA GTTGAGAATA TTCGAAAGAA AGATAATGGT GAATTTAGTC ATCATGACCT GGCCCCAGCC CTAGATACTG GCACTACTGA GGAGGATCGT TTAAAAATTG ATGTAATTGA CTGGTTGGTA TTTGACCCAG CGCAGAGGGC AGAAGCACTG AAACAAGGCA ATGCAATTAT GAGAAAATTC TTGGCATCAA AAAAGCACGA AGCTGCAAAA GAAGTATTTG TGAAAATTCC TCAGGATTCT ATAGCAGAAA TCTATAATCA GTGCGAGGAA CAAGGAATGG AAAGTCCACT TCCTGCTGAA GATGATAATG CTATCCGAGA ACATTTGTGC ATCAGAGCTT ATTTGGAAGC CCATGAAACC TTTAATGAGT GGTTTAAGCA TATGAATTCA GTTCCACAAA AACCTGCTTT GATACCTCAA CCAACTTTTA CTGAGAAAGT GGCTCATGAA CACAAAGAAA AGAAATATGA AATGGATTTT GGTATTTGGA AAGGGCATTT GGATGCCCTA ACTGCTGATG TGAAGGAGAA AATGTATAAC GTCTTGTTGT TTGTTGATGG AGGGTGGATG GTGGATGTTA GAGAGGATGC CAAAGAAGAC CATGAAAGAA CACATCAAAT GGTCTTACTG AGAAAGCTTT GTCTGCCAAT GTTGTGTTTT CTGCTTCATA CGATATTGCA CAGTACTGGT CAGTATCAGG AATGCCTACA GTTAGCAGAT ATGGTATCCT CTGAGCGCCA CAAACTGTAC CTGGTATTTT CTAAGGAAGA GCTAAGGAAG TTGCTGCAGA AGCTCAGAGA GTCCTCTCTA ATGCTCCTAG ACCAGGGACT TGACCCATTA GGGTATGAAA TTCAGTTATA G
The stop codons will be deleted if pcDNA3.1+ /C-(K)DYK vector is selected.
RefSeq
NP_001317121.1
CDS 204..2894
Translation
Target ORF information:
RefSeq Version NM_001330192.2
Organism Homo sapiens(human)
Definition Homo sapiens nucleoporin 107 (NUP107), transcript variant 2, mRNA.
Target ORF information:
Epitope DYKDDDDK
Bacterial selection AMPR
Mammalian selection NeoR
Vector pcDNA3.1+ /C-(K)DYK
NM_001330192.2
ORF Insert Sequence:
1 61 121 181 241 301 361 421 481 541 601 661 721 781 841 901 961 1021 1081 1141 1201 1261 1321 1381 1441 1501 1561 1621 1681 1741 1801 1861 1921 1981 2041 2101 2161 2221 2281 2341 2401 2461 2521 2581 2641 ATGAAAATTT TGGTAATACT ACACCAAGAA ACCAGGTTAT CCCTCGAACT CCTAGCTCAT TTCGACAGCC TTGTTCTTTC TACCAACCTT TTGTTTATAG TTACCCCAAC AAGCCGAAGC TTACTAAGGC AGCCAGATAT TTCCTGCATT CTTGGAACAG GAGGGAAGTC GCCCCGACTT ACGCAGTCTT CAGGGTTCTT TGGAAATCTC TCCATGGTTA CTAATCTGGA TGACAGTAAC TGGGCAGCTG CATTTTCATC ACAGCGTTCC GGGCTGTTCA CAAACACAGA GCCCCACAGT ATAACAGAAG ATGTAACTAT CAGTGCTGTT ATGTTACGTG AGGATGATCC TGGAGAAGCT GCATCCATGA GTATGTTTTC TGATTTCCTG CAGTCTTTTC TGAAGCACTC TTCGAGTACA GTTTTTGATC TTGTGGAAGA GTATGAAAAC ATCTGTGGTA GTCAGGTGAA TATACTGAGT AAAATAGTGA GTCGAGCAAC ACCTGGACTT CAAAAATTTT CAAAAACAGC CAGTATGCTC TGGCTTCTTC AACAGGAGAT GGTCACATGG AGGCTGCTGG CTTCTTTGTA TAGAGACAGA ATACAGTCTG CATTAGAAGA GGAAAGTGTA TTCGCAGTTA CTGCTGTTAA TGCCAGTGAA AAAACAGTTG TGGAAGCGTT ATTTCAGAGG GATTCACTTG TTCGACAAAG TCAGCTGGTG GTAGATTGGT TAGAGAGTAT TGCCAAAGAT GAAATTGGAG AATTTTCTGA TAATATTGAG TTTTATGCAA AATCAGTATA TTGGGAAAAT ACTCTGCATA CCTTAAAACA ACGGCAGCTG ACTTCTTACG TTGGAAGTGT TCGTCCGCTT GTCACTGAAT TGGACCCTGA TGCTCCCATA AGACAGAAAA TGCCCCTTGA TGATCTGGAT AGAGAAGATG AAGTTAGATT ACTCAAATAT CTCTTTACTC TAATCCGTGC TGGAATGACA GAAGAGGCAC AACGACTCTG TAAACGCTGT GGTCAAGCAT GGAGAGCTGC AACACTTGAA GGCTGGAAAC TGTACCATGA CCCTAATGTT AATGGAGGAA CAGAATTAGA ACCTGTTGAA GGGAATCCAT ATAGACGCAT TTGGAAAATA AGTTGCTGGA GAATGGCAGA AGATGAGCTT TTTAATAGAT ACGAGAGAGC AATTTATGCA GCTTTAAGTG GGAATCTTAA GCAGCTGCTT CCTGTCTGTG ACACCTGGGA AGACACAGTT TGGGCCTACT TCCGGGTGAT GGTGGACAGT CTGGTAGAAC AGGAGATCCA GACATCAGTA GCAACTCTGG ATGAAACTGA AGAACTCCCT AGAGAATATC TGGGAGCAAA CTGGACGTTA GAAAAGGTTT TTGAGGAACT TCAAGCTACT GACAAAAAGA GAGTTCTGGA AGAGAATCAA GAACATTATC ATATAGTTCA AAAGTTTCTT ATCCTGGGAG ACATTGATGG TTTGATGGAT GAGTTTAGCA AATGGCTTTC CAAAAGCAGA AACAATCTAC CTGGACACCT GCTTCGCTTT ATGACTCACC TTATTTTGTT TTTCCGTACT CTGGGACTAC AGACCAAGGA GGAAGTTTCT ATTGAAGTTT TAAAGACATA CATACAGCTT TTAATAAGAG AGAAACATAC AAATCTTATA GCATTTTATA CCTGTCATTT GCCTCAAGAC CTAGCTGTTG CCCAGTATGC ATTATTTTTG GAAAGTGTTA CAGAATTTGA ACAGCGCCAC CATTGCCTGG AGTTGGCTAA AGAAGCAGAT TTGGATGTTG CAACAATAAC AAAAACTGTA GTTGAGAATA TTCGAAAGAA AGATAATGGT GAATTTAGTC ATCATGACCT GGCCCCAGCC CTAGATACTG GCACTACTGA GGAGGATCGT TTAAAAATTG ATGTAATTGA CTGGTTGGTA TTTGACCCAG CGCAGAGGGC AGAAGCACTG AAACAAGGCA ATGCAATTAT GAGAAAATTC TTGGCATCAA AAAAGCACGA AGCTGCAAAA GAAGTATTTG TGAAAATTCC TCAGGATTCT ATAGCAGAAA TCTATAATCA GTGCGAGGAA CAAGGAATGG AAAGTCCACT TCCTGCTGAA GATGATAATG CTATCCGAGA ACATTTGTGC ATCAGAGCTT ATTTGGAAGC CCATGAAACC TTTAATGAGT GGTTTAAGCA TATGAATTCA GTTCCACAAA AACCTGCTTT GATACCTCAA CCAACTTTTA CTGAGAAAGT GGCTCATGAA CACAAAGAAA AGAAATATGA AATGGATTTT GGTATTTGGA AAGGGCATTT GGATGCCCTA ACTGCTGATG TGAAGGAGAA AATGTATAAC GTCTTGTTGT TTGTTGATGG AGGGTGGATG GTGGATGTTA GAGAGGATGC CAAAGAAGAC CATGAAAGAA CACATCAAAT GGTCTTACTG AGAAAGCTTT GTCTGCCAAT GTTGTGTTTT CTGCTTCATA CGATATTGCA CAGTACTGGT CAGTATCAGG AATGCCTACA GTTAGCAGAT ATGGTATCCT CTGAGCGCCA CAAACTGTAC CTGGTATTTT CTAAGGAAGA GCTAAGGAAG TTGCTGCAGA AGCTCAGAGA GTCCTCTCTA ATGCTCCTAG ACCAGGGACT TGACCCATTA GGGTATGAAA TTCAGTTATA G
The stop codons will be deleted if pcDNA3.1+ /C-(K)DYK vector is selected.
CloneID
OHu46723
Clone ID Related Accession (Same CDS sequence)
XM_005269037.3
, XM_005269037.4
Accession Version
XM_005269037.3
Documents for ORF clone product in default vector
Sequence Information
ORF Nucleotide Sequence (Length: 2718bp)
Protein sequence
SNP
Vector
pcDNA3.1+ /C-(K)DYK or customized vector
User Manual
Clone information
Clone Map
MSDS
Tag on pcDNA3.1+ /C-(K)DYK
C terminal DYKDDDDK tags
ORF Insert Method
CloneEZ™ Seamless cloning technology
Insert Structure
linear
Update Date
2016-06-05
Organism
Homo sapiens(human)
Product
nuclear pore complex protein Nup107 isoform X1
Comment
Comment: MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NC_000012.12) annotated using gene prediction method: Gnomon, supported by EST evidence. Also see: Documentation of NCBI's Annotation Process
On Jun 6, 2016 this sequence version replaced XM_005269037.2.
##Genome-Annotation-Data-START##
Annotation Provider :: NCBI
Annotation Status :: Full annotation
Annotation Version :: Homo sapiens Annotation Release 108
Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline
Annotation Software Version :: 7.0
Annotation Method :: Best-placed RefSeq; Gnomon
Features Annotated :: Gene; mRNA; CDS; ncRNA
##Genome-Annotation-Data-END##
1 61 121 181 241 301 361 421 481 541 601 661 721 781 841 901 961 1021 1081 1141 1201 1261 1321 1381 1441 1501 1561 1621 1681 1741 1801 1861 1921 1981 2041 2101 2161 2221 2281 2341 2401 2461 2521 2581 2641 2701 ATGGACAGGA GTGGCTTTGG AGAGATATCA TCCCCTGTAA TCCGGGAGGC AGAGGTGACA CGGACTGCAC GGAAACAGAG TGCTCAGAAA AGAGTTTTAC TTCAGGCATC TCAAGATGAA AATTTTGGTA ATACTACACC AAGAAACCAG GTTATCCCTC GAACTCCTAG CTCATTTCGA CAGCCTTTTA CCCCAACAAG CCGAAGCTTA CTAAGGCAGC CAGATATTTC CTGCATTCTT GGAACAGGAG GGAAGTCGCC CCGACTTACG CAGTCTTCAG GGTTCTTTGG AAATCTCTCC ATGGTTACTA ATCTGGATGA CAGTAACTGG GCAGCTGCAT TTTCATCACA GCGTTCCGGG CTGTTCACAA ACACAGAGCC CCACAGTATA ACAGAAGATG TAACTATCAG TGCTGTTATG TTACGTGAGG ATGATCCTGG AGAAGCTGCA TCCATGAGTA TGTTTTCTGA TTTCCTGCAG TCTTTTCTGA AGCACTCTTC GAGTACAGTT TTTGATCTTG TGGAAGAGTA TGAAAACATC TGTGGTAGTC AGGTGAATAT ACTGAGTAAA ATAGTGAGTC GAGCAACACC TGGACTTCAA AAATTTTCAA AAACAGCCAG TATGCTCTGG CTTCTTCAAC AGGAGATGGT CACATGGAGG CTGCTGGCTT CTTTGTATAG AGACAGAATA CAGTCTGCAT TAGAAGAGGA AAGTGTATTC GCAGTTACTG CTGTTAATGC CAGTGAAAAA ACAGTTGTGG AAGCGTTATT TCAGAGGGAT TCACTTGTTC GACAAAGTCA GCTGGTGGTA GATTGGTTAG AGAGTATTGC CAAAGATGAA ATTGGAGAAT TTTCTGATAA TATTGAGTTT TATGCAAAAT CAGTATATTG GGAAAATACT CTGCATACCT TAAAACAACG GCAGCTGACT TCTTACGTTG GAAGTGTTCG TCCGCTTGTC ACTGAATTGG ACCCTGATGC TCCCATAAGA CAGAAAATGC CCCTTGATGA TCTGGATAGA GAAGATGAAG TTAGATTACT CAAATATCTC TTTACTCTAA TCCGTGCTGG AATGACAGAA GAGGCACAAC GACTCTGTAA ACGCTGTGGT CAAGCATGGA GAGCTGCAAC ACTTGAAGGC TGGAAACTGT ACCATGACCC TAATGTTAAT GGAGGAACAG AATTAGAACC TGTTGAAGGG AATCCATATA GACGCATTTG GAAAATAAGT TGCTGGAGAA TGGCAGAAGA TCTGCTTCCT GTCTGTGACA CCTGGGAAGA CACAGTTTGG GCCTACTTCC GGGTGATGGT GGACAGTCTG GTAGAACAGG AGATCCAGAC ATCAGTAGCA ACTCTGGATG AAACTGAAGA ACTCCCTAGA GAATATCTGG GAGCAAACTG GACGTTAGAA AAGGTTTTTG AGGAACTTCA AGCTACTGAC AAAAAGAGAG TTCTGGAAGA GAATCAAGAA CATTATCATA TAGTTCAAAA GTTTCTTATC CTGGGAGACA TTGATGGTTT GATGGATGAG TTTAGCAAAT GGCTTTCCAA AAGCAGAAAC AATCTACCTG GACACCTGCT TCGCTTTATG ACTCACCTTA TTTTGTTTTT CCGTACTCTG GGACTACAGA CCAAGGAGGA AGTTTCTATT GAAGTTTTAA AGACATACAT ACAGCTTTTA ATAAGAGAGA AACATACAAA TCTTATAGCA TTTTATACCT GTCATTTGCC TCAAGACCTA GCTGTTGCCC AGTATGCATT ATTTTTGGAA AGTGTTACAG AATTTGAACA GCGCCACCAT TGCCTGGAGT TGGCTAAAGA AGCAGATTTG GATGTTGCAA CAATAACAAA AACTGTAGTT GAGAATATTC GAAAGAAAGA TAATGGTGAA TTTAGTCATC ATGACCTGGC CCCAGCCCTA GATACTGGCA CTACTGAGGA GGATCGTTTA AAAATTGATG TAATTGACTG GTTGGTATTT GACCCAGCGC AGAGGGCAGA AGCACTGAAA CAAGGCAATG CAATTATGAG AAAATTCTTG GCATCAAAAA AGCACGAAGC TGCAAAAGAA GTATTTGTGA AAATTCCTCA GGATTCTATA GCAGAAATCT ATAATCAGTG CGAGGAACAA GGAATGGAAA GTCCACTTCC TGCTGAAGAT GATAATGCTA TCCGAGAACA TTTGTGCATC AGAGCTTATT TGGAAGCCCA TGAAACCTTT AATGAGTGGT TTAAGCATAT GAATTCAGTT CCACAAAAAC CTGCTTTGAT ACCTCAACCA ACTTTTACTG AGAAAGTGGC TCATGAACAC AAAGAAAAGA AATATGAAAT GGATTTTGGT ATTTGGAAAG GGCATTTGGA TGCCCTAACT GCTGATGTGA AGGAGAAAAT GTATAACGTC TTGTTGTTTG TTGATGGAGG GTGGATGGTG GATGTTAGAG AGGATGCCAA AGAAGACCAT GAAAGAACAC ATCAAATGGT CTTACTGAGA AAGCTTTGTC TGCCAATGTT GTGTTTTCTG CTTCATACGA TATTGCACAG TACTGGTCAG TATCAGGAAT GCCTACAGTT AGCAGATATG GTATCCTCTG AGCGCCACAA ACTGTACCTG GTATTTTCTA AGGAAGAGCT AAGGAAGTTG CTGCAGAAGC TCAGAGAGTC CTCTCTAATG CTCCTAGACC AGGGACTTGA CCCATTAGGG TATGAAATTC AGTTATAG
The stop codons will be deleted if pcDNA3.1+ /C-(K)DYK vector is selected.
RefSeq
XP_005269094.1
CDS 107..2824
Translation
Target ORF information:
RefSeq Version XM_005269037.3
Organism Homo sapiens(human)
Definition Homo sapiens nucleoporin 107kDa (NUP107), transcript variant X1, mRNA.
Target ORF information:
Epitope DYKDDDDK
Bacterial selection AMPR
Mammalian selection NeoR
Vector pcDNA3.1+ /C-(K)DYK
XM_005269037.3
ORF Insert Sequence:
1 61 121 181 241 301 361 421 481 541 601 661 721 781 841 901 961 1021 1081 1141 1201 1261 1321 1381 1441 1501 1561 1621 1681 1741 1801 1861 1921 1981 2041 2101 2161 2221 2281 2341 2401 2461 2521 2581 2641 2701 ATGGACAGGA GTGGCTTTGG AGAGATATCA TCCCCTGTAA TCCGGGAGGC AGAGGTGACA CGGACTGCAC GGAAACAGAG TGCTCAGAAA AGAGTTTTAC TTCAGGCATC TCAAGATGAA AATTTTGGTA ATACTACACC AAGAAACCAG GTTATCCCTC GAACTCCTAG CTCATTTCGA CAGCCTTTTA CCCCAACAAG CCGAAGCTTA CTAAGGCAGC CAGATATTTC CTGCATTCTT GGAACAGGAG GGAAGTCGCC CCGACTTACG CAGTCTTCAG GGTTCTTTGG AAATCTCTCC ATGGTTACTA ATCTGGATGA CAGTAACTGG GCAGCTGCAT TTTCATCACA GCGTTCCGGG CTGTTCACAA ACACAGAGCC CCACAGTATA ACAGAAGATG TAACTATCAG TGCTGTTATG TTACGTGAGG ATGATCCTGG AGAAGCTGCA TCCATGAGTA TGTTTTCTGA TTTCCTGCAG TCTTTTCTGA AGCACTCTTC GAGTACAGTT TTTGATCTTG TGGAAGAGTA TGAAAACATC TGTGGTAGTC AGGTGAATAT ACTGAGTAAA ATAGTGAGTC GAGCAACACC TGGACTTCAA AAATTTTCAA AAACAGCCAG TATGCTCTGG CTTCTTCAAC AGGAGATGGT CACATGGAGG CTGCTGGCTT CTTTGTATAG AGACAGAATA CAGTCTGCAT TAGAAGAGGA AAGTGTATTC GCAGTTACTG CTGTTAATGC CAGTGAAAAA ACAGTTGTGG AAGCGTTATT TCAGAGGGAT TCACTTGTTC GACAAAGTCA GCTGGTGGTA GATTGGTTAG AGAGTATTGC CAAAGATGAA ATTGGAGAAT TTTCTGATAA TATTGAGTTT TATGCAAAAT CAGTATATTG GGAAAATACT CTGCATACCT TAAAACAACG GCAGCTGACT TCTTACGTTG GAAGTGTTCG TCCGCTTGTC ACTGAATTGG ACCCTGATGC TCCCATAAGA CAGAAAATGC CCCTTGATGA TCTGGATAGA GAAGATGAAG TTAGATTACT CAAATATCTC TTTACTCTAA TCCGTGCTGG AATGACAGAA GAGGCACAAC GACTCTGTAA ACGCTGTGGT CAAGCATGGA GAGCTGCAAC ACTTGAAGGC TGGAAACTGT ACCATGACCC TAATGTTAAT GGAGGAACAG AATTAGAACC TGTTGAAGGG AATCCATATA GACGCATTTG GAAAATAAGT TGCTGGAGAA TGGCAGAAGA TCTGCTTCCT GTCTGTGACA CCTGGGAAGA CACAGTTTGG GCCTACTTCC GGGTGATGGT GGACAGTCTG GTAGAACAGG AGATCCAGAC ATCAGTAGCA ACTCTGGATG AAACTGAAGA ACTCCCTAGA GAATATCTGG GAGCAAACTG GACGTTAGAA AAGGTTTTTG AGGAACTTCA AGCTACTGAC AAAAAGAGAG TTCTGGAAGA GAATCAAGAA CATTATCATA TAGTTCAAAA GTTTCTTATC CTGGGAGACA TTGATGGTTT GATGGATGAG TTTAGCAAAT GGCTTTCCAA AAGCAGAAAC AATCTACCTG GACACCTGCT TCGCTTTATG ACTCACCTTA TTTTGTTTTT CCGTACTCTG GGACTACAGA CCAAGGAGGA AGTTTCTATT GAAGTTTTAA AGACATACAT ACAGCTTTTA ATAAGAGAGA AACATACAAA TCTTATAGCA TTTTATACCT GTCATTTGCC TCAAGACCTA GCTGTTGCCC AGTATGCATT ATTTTTGGAA AGTGTTACAG AATTTGAACA GCGCCACCAT TGCCTGGAGT TGGCTAAAGA AGCAGATTTG GATGTTGCAA CAATAACAAA AACTGTAGTT GAGAATATTC GAAAGAAAGA TAATGGTGAA TTTAGTCATC ATGACCTGGC CCCAGCCCTA GATACTGGCA CTACTGAGGA GGATCGTTTA AAAATTGATG TAATTGACTG GTTGGTATTT GACCCAGCGC AGAGGGCAGA AGCACTGAAA CAAGGCAATG CAATTATGAG AAAATTCTTG GCATCAAAAA AGCACGAAGC TGCAAAAGAA GTATTTGTGA AAATTCCTCA GGATTCTATA GCAGAAATCT ATAATCAGTG CGAGGAACAA GGAATGGAAA GTCCACTTCC TGCTGAAGAT GATAATGCTA TCCGAGAACA TTTGTGCATC AGAGCTTATT TGGAAGCCCA TGAAACCTTT AATGAGTGGT TTAAGCATAT GAATTCAGTT CCACAAAAAC CTGCTTTGAT ACCTCAACCA ACTTTTACTG AGAAAGTGGC TCATGAACAC AAAGAAAAGA AATATGAAAT GGATTTTGGT ATTTGGAAAG GGCATTTGGA TGCCCTAACT GCTGATGTGA AGGAGAAAAT GTATAACGTC TTGTTGTTTG TTGATGGAGG GTGGATGGTG GATGTTAGAG AGGATGCCAA AGAAGACCAT GAAAGAACAC ATCAAATGGT CTTACTGAGA AAGCTTTGTC TGCCAATGTT GTGTTTTCTG CTTCATACGA TATTGCACAG TACTGGTCAG TATCAGGAAT GCCTACAGTT AGCAGATATG GTATCCTCTG AGCGCCACAA ACTGTACCTG GTATTTTCTA AGGAAGAGCT AAGGAAGTTG CTGCAGAAGC TCAGAGAGTC CTCTCTAATG CTCCTAGACC AGGGACTTGA CCCATTAGGG TATGAAATTC AGTTATAG
The stop codons will be deleted if pcDNA3.1+ /C-(K)DYK vector is selected.
CloneID
OHu46723
Clone ID Related Accession (Same CDS sequence)
XM_005269037.3
, XM_005269037.4
Accession Version
XM_005269037.4 Latest version!
Documents for ORF clone product in default vector
Sequence Information
ORF Nucleotide Sequence (Length: 2718bp)
Protein sequence
SNP
Vector
pcDNA3.1+ /C-(K)DYK or customized vector
User Manual
Clone information
Clone Map
MSDS
Tag on pcDNA3.1+ /C-(K)DYK
C terminal DYKDDDDK tags
ORF Insert Method
CloneEZ™ Seamless cloning technology
Insert Structure
linear
Update Date
2019-12-05
Organism
Homo sapiens(human)
Product
nuclear pore complex protein Nup107 isoform X1
Comment
Comment: MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NC_000012.12) annotated using gene prediction method: Gnomon, supported by EST evidence. Also see: Documentation of NCBI's Annotation Process
On Mar 26, 2018 this sequence version replaced XM_005269037.3.
##Genome-Annotation-Data-START##
Annotation Provider :: NCBI
Annotation Status :: Updated annotation
Annotation Name :: Homo sapiens Updated Annotation Release 109.20191205
Annotation Version :: 109.20191205
Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline
Annotation Software Version :: 8.3
Annotation Method :: Best-placed RefSeq; propagated RefSeq model
Features Annotated :: Gene; mRNA; CDS; ncRNA
##Genome-Annotation-Data-END##
1 61 121 181 241 301 361 421 481 541 601 661 721 781 841 901 961 1021 1081 1141 1201 1261 1321 1381 1441 1501 1561 1621 1681 1741 1801 1861 1921 1981 2041 2101 2161 2221 2281 2341 2401 2461 2521 2581 2641 2701 ATGGACAGGA GTGGCTTTGG AGAGATATCA TCCCCTGTAA TCCGGGAGGC AGAGGTGACA CGGACTGCAC GGAAACAGAG TGCTCAGAAA AGAGTTTTAC TTCAGGCATC TCAAGATGAA AATTTTGGTA ATACTACACC AAGAAACCAG GTTATCCCTC GAACTCCTAG CTCATTTCGA CAGCCTTTTA CCCCAACAAG CCGAAGCTTA CTAAGGCAGC CAGATATTTC CTGCATTCTT GGAACAGGAG GGAAGTCGCC CCGACTTACG CAGTCTTCAG GGTTCTTTGG AAATCTCTCC ATGGTTACTA ATCTGGATGA CAGTAACTGG GCAGCTGCAT TTTCATCACA GCGTTCCGGG CTGTTCACAA ACACAGAGCC CCACAGTATA ACAGAAGATG TAACTATCAG TGCTGTTATG TTACGTGAGG ATGATCCTGG AGAAGCTGCA TCCATGAGTA TGTTTTCTGA TTTCCTGCAG TCTTTTCTGA AGCACTCTTC GAGTACAGTT TTTGATCTTG TGGAAGAGTA TGAAAACATC TGTGGTAGTC AGGTGAATAT ACTGAGTAAA ATAGTGAGTC GAGCAACACC TGGACTTCAA AAATTTTCAA AAACAGCCAG TATGCTCTGG CTTCTTCAAC AGGAGATGGT CACATGGAGG CTGCTGGCTT CTTTGTATAG AGACAGAATA CAGTCTGCAT TAGAAGAGGA AAGTGTATTC GCAGTTACTG CTGTTAATGC CAGTGAAAAA ACAGTTGTGG AAGCGTTATT TCAGAGGGAT TCACTTGTTC GACAAAGTCA GCTGGTGGTA GATTGGTTAG AGAGTATTGC CAAAGATGAA ATTGGAGAAT TTTCTGATAA TATTGAGTTT TATGCAAAAT CAGTATATTG GGAAAATACT CTGCATACCT TAAAACAACG GCAGCTGACT TCTTACGTTG GAAGTGTTCG TCCGCTTGTC ACTGAATTGG ACCCTGATGC TCCCATAAGA CAGAAAATGC CCCTTGATGA TCTGGATAGA GAAGATGAAG TTAGATTACT CAAATATCTC TTTACTCTAA TCCGTGCTGG AATGACAGAA GAGGCACAAC GACTCTGTAA ACGCTGTGGT CAAGCATGGA GAGCTGCAAC ACTTGAAGGC TGGAAACTGT ACCATGACCC TAATGTTAAT GGAGGAACAG AATTAGAACC TGTTGAAGGG AATCCATATA GACGCATTTG GAAAATAAGT TGCTGGAGAA TGGCAGAAGA TCTGCTTCCT GTCTGTGACA CCTGGGAAGA CACAGTTTGG GCCTACTTCC GGGTGATGGT GGACAGTCTG GTAGAACAGG AGATCCAGAC ATCAGTAGCA ACTCTGGATG AAACTGAAGA ACTCCCTAGA GAATATCTGG GAGCAAACTG GACGTTAGAA AAGGTTTTTG AGGAACTTCA AGCTACTGAC AAAAAGAGAG TTCTGGAAGA GAATCAAGAA CATTATCATA TAGTTCAAAA GTTTCTTATC CTGGGAGACA TTGATGGTTT GATGGATGAG TTTAGCAAAT GGCTTTCCAA AAGCAGAAAC AATCTACCTG GACACCTGCT TCGCTTTATG ACTCACCTTA TTTTGTTTTT CCGTACTCTG GGACTACAGA CCAAGGAGGA AGTTTCTATT GAAGTTTTAA AGACATACAT ACAGCTTTTA ATAAGAGAGA AACATACAAA TCTTATAGCA TTTTATACCT GTCATTTGCC TCAAGACCTA GCTGTTGCCC AGTATGCATT ATTTTTGGAA AGTGTTACAG AATTTGAACA GCGCCACCAT TGCCTGGAGT TGGCTAAAGA AGCAGATTTG GATGTTGCAA CAATAACAAA AACTGTAGTT GAGAATATTC GAAAGAAAGA TAATGGTGAA TTTAGTCATC ATGACCTGGC CCCAGCCCTA GATACTGGCA CTACTGAGGA GGATCGTTTA AAAATTGATG TAATTGACTG GTTGGTATTT GACCCAGCGC AGAGGGCAGA AGCACTGAAA CAAGGCAATG CAATTATGAG AAAATTCTTG GCATCAAAAA AGCACGAAGC TGCAAAAGAA GTATTTGTGA AAATTCCTCA GGATTCTATA GCAGAAATCT ATAATCAGTG CGAGGAACAA GGAATGGAAA GTCCACTTCC TGCTGAAGAT GATAATGCTA TCCGAGAACA TTTGTGCATC AGAGCTTATT TGGAAGCCCA TGAAACCTTT AATGAGTGGT TTAAGCATAT GAATTCAGTT CCACAAAAAC CTGCTTTGAT ACCTCAACCA ACTTTTACTG AGAAAGTGGC TCATGAACAC AAAGAAAAGA AATATGAAAT GGATTTTGGT ATTTGGAAAG GGCATTTGGA TGCCCTAACT GCTGATGTGA AGGAGAAAAT GTATAACGTC TTGTTGTTTG TTGATGGAGG GTGGATGGTG GATGTTAGAG AGGATGCCAA AGAAGACCAT GAAAGAACAC ATCAAATGGT CTTACTGAGA AAGCTTTGTC TGCCAATGTT GTGTTTTCTG CTTCATACGA TATTGCACAG TACTGGTCAG TATCAGGAAT GCCTACAGTT AGCAGATATG GTATCCTCTG AGCGCCACAA ACTGTACCTG GTATTTTCTA AGGAAGAGCT AAGGAAGTTG CTGCAGAAGC TCAGAGAGTC CTCTCTAATG CTCCTAGACC AGGGACTTGA CCCATTAGGG TATGAAATTC AGTTATAG
The stop codons will be deleted if pcDNA3.1+ /C-(K)DYK vector is selected.
RefSeq
XP_005269094.1
CDS 96..2813
Translation
Target ORF information:
RefSeq Version XM_005269037.4
Organism Homo sapiens(human)
Definition Homo sapiens nucleoporin 107 (NUP107), transcript variant X1, mRNA.
Target ORF information:
Epitope DYKDDDDK
Bacterial selection AMPR
Mammalian selection NeoR
Vector pcDNA3.1+ /C-(K)DYK
XM_005269037.4
ORF Insert Sequence:
1 61 121 181 241 301 361 421 481 541 601 661 721 781 841 901 961 1021 1081 1141 1201 1261 1321 1381 1441 1501 1561 1621 1681 1741 1801 1861 1921 1981 2041 2101 2161 2221 2281 2341 2401 2461 2521 2581 2641 2701 ATGGACAGGA GTGGCTTTGG AGAGATATCA TCCCCTGTAA TCCGGGAGGC AGAGGTGACA CGGACTGCAC GGAAACAGAG TGCTCAGAAA AGAGTTTTAC TTCAGGCATC TCAAGATGAA AATTTTGGTA ATACTACACC AAGAAACCAG GTTATCCCTC GAACTCCTAG CTCATTTCGA CAGCCTTTTA CCCCAACAAG CCGAAGCTTA CTAAGGCAGC CAGATATTTC CTGCATTCTT GGAACAGGAG GGAAGTCGCC CCGACTTACG CAGTCTTCAG GGTTCTTTGG AAATCTCTCC ATGGTTACTA ATCTGGATGA CAGTAACTGG GCAGCTGCAT TTTCATCACA GCGTTCCGGG CTGTTCACAA ACACAGAGCC CCACAGTATA ACAGAAGATG TAACTATCAG TGCTGTTATG TTACGTGAGG ATGATCCTGG AGAAGCTGCA TCCATGAGTA TGTTTTCTGA TTTCCTGCAG TCTTTTCTGA AGCACTCTTC GAGTACAGTT TTTGATCTTG TGGAAGAGTA TGAAAACATC TGTGGTAGTC AGGTGAATAT ACTGAGTAAA ATAGTGAGTC GAGCAACACC TGGACTTCAA AAATTTTCAA AAACAGCCAG TATGCTCTGG CTTCTTCAAC AGGAGATGGT CACATGGAGG CTGCTGGCTT CTTTGTATAG AGACAGAATA CAGTCTGCAT TAGAAGAGGA AAGTGTATTC GCAGTTACTG CTGTTAATGC CAGTGAAAAA ACAGTTGTGG AAGCGTTATT TCAGAGGGAT TCACTTGTTC GACAAAGTCA GCTGGTGGTA GATTGGTTAG AGAGTATTGC CAAAGATGAA ATTGGAGAAT TTTCTGATAA TATTGAGTTT TATGCAAAAT CAGTATATTG GGAAAATACT CTGCATACCT TAAAACAACG GCAGCTGACT TCTTACGTTG GAAGTGTTCG TCCGCTTGTC ACTGAATTGG ACCCTGATGC TCCCATAAGA CAGAAAATGC CCCTTGATGA TCTGGATAGA GAAGATGAAG TTAGATTACT CAAATATCTC TTTACTCTAA TCCGTGCTGG AATGACAGAA GAGGCACAAC GACTCTGTAA ACGCTGTGGT CAAGCATGGA GAGCTGCAAC ACTTGAAGGC TGGAAACTGT ACCATGACCC TAATGTTAAT GGAGGAACAG AATTAGAACC TGTTGAAGGG AATCCATATA GACGCATTTG GAAAATAAGT TGCTGGAGAA TGGCAGAAGA TCTGCTTCCT GTCTGTGACA CCTGGGAAGA CACAGTTTGG GCCTACTTCC GGGTGATGGT GGACAGTCTG GTAGAACAGG AGATCCAGAC ATCAGTAGCA ACTCTGGATG AAACTGAAGA ACTCCCTAGA GAATATCTGG GAGCAAACTG GACGTTAGAA AAGGTTTTTG AGGAACTTCA AGCTACTGAC AAAAAGAGAG TTCTGGAAGA GAATCAAGAA CATTATCATA TAGTTCAAAA GTTTCTTATC CTGGGAGACA TTGATGGTTT GATGGATGAG TTTAGCAAAT GGCTTTCCAA AAGCAGAAAC AATCTACCTG GACACCTGCT TCGCTTTATG ACTCACCTTA TTTTGTTTTT CCGTACTCTG GGACTACAGA CCAAGGAGGA AGTTTCTATT GAAGTTTTAA AGACATACAT ACAGCTTTTA ATAAGAGAGA AACATACAAA TCTTATAGCA TTTTATACCT GTCATTTGCC TCAAGACCTA GCTGTTGCCC AGTATGCATT ATTTTTGGAA AGTGTTACAG AATTTGAACA GCGCCACCAT TGCCTGGAGT TGGCTAAAGA AGCAGATTTG GATGTTGCAA CAATAACAAA AACTGTAGTT GAGAATATTC GAAAGAAAGA TAATGGTGAA TTTAGTCATC ATGACCTGGC CCCAGCCCTA GATACTGGCA CTACTGAGGA GGATCGTTTA AAAATTGATG TAATTGACTG GTTGGTATTT GACCCAGCGC AGAGGGCAGA AGCACTGAAA CAAGGCAATG CAATTATGAG AAAATTCTTG GCATCAAAAA AGCACGAAGC TGCAAAAGAA GTATTTGTGA AAATTCCTCA GGATTCTATA GCAGAAATCT ATAATCAGTG CGAGGAACAA GGAATGGAAA GTCCACTTCC TGCTGAAGAT GATAATGCTA TCCGAGAACA TTTGTGCATC AGAGCTTATT TGGAAGCCCA TGAAACCTTT AATGAGTGGT TTAAGCATAT GAATTCAGTT CCACAAAAAC CTGCTTTGAT ACCTCAACCA ACTTTTACTG AGAAAGTGGC TCATGAACAC AAAGAAAAGA AATATGAAAT GGATTTTGGT ATTTGGAAAG GGCATTTGGA TGCCCTAACT GCTGATGTGA AGGAGAAAAT GTATAACGTC TTGTTGTTTG TTGATGGAGG GTGGATGGTG GATGTTAGAG AGGATGCCAA AGAAGACCAT GAAAGAACAC ATCAAATGGT CTTACTGAGA AAGCTTTGTC TGCCAATGTT GTGTTTTCTG CTTCATACGA TATTGCACAG TACTGGTCAG TATCAGGAAT GCCTACAGTT AGCAGATATG GTATCCTCTG AGCGCCACAA ACTGTACCTG GTATTTTCTA AGGAAGAGCT AAGGAAGTTG CTGCAGAAGC TCAGAGAGTC CTCTCTAATG CTCCTAGACC AGGGACTTGA CCCATTAGGG TATGAAATTC AGTTATAG
The stop codons will be deleted if pcDNA3.1+ /C-(K)DYK vector is selected.
Homozygous mutation in
Journal of medical genetics54(6)399-403(2017 Jun)
Rosti RO,Sotak BN,Bielas SL,Bhat G,Silhavy JL,Aslanger AD,Altunoglu U,Bilge I,Tasdemir M,Yzaguirrem AD,Musaev D,Infante S,Thuong W,Marin-Valencia I,Nelson SF,Kayserili H,Gleeson JG