Gene Symbol | AMIGO1 |
Entrez Gene ID | 57463 |
Full Name | adhesion molecule with Ig like domain 1 |
Synonyms | ALI2,AMIGO,AMIGO-1 |
General protein information |
|
Gene Type | protein-coding |
Organism | Homo sapiens(human) |
Genome | |
Disorder MIM: |
ORF » Species Summary » Homo sapiens » AMIGO1 cDNA ORF clone
Gene Symbol | AMIGO1 |
Entrez Gene ID | 57463 |
Full Name | adhesion molecule with Ig like domain 1 |
Synonyms | ALI2,AMIGO,AMIGO-1 |
General protein information |
|
Gene Type | protein-coding |
Organism | Homo sapiens(human) |
Genome | |
Disorder MIM: |
mRNA | Protein | Name |
---|---|---|
XM_011541812.2 | XP_011540114.1 | amphoterin-induced protein 1 isoform X1 |
NM_020703.2 | NP_065754.2 | amphoterin-induced protein 1 precursor |
NM_020703.3 | NP_065754.2 | amphoterin-induced protein 1 precursor |
NM_020703.4 | NP_065754.2 | amphoterin-induced protein 1 precursor |
AMIGO1 | XP_002801737.1 | |
Danio rerio (zebrafish) | amigo1 | XP_001924023.1 |
Homo sapiens (human) | AMIGO1 | NP_065754.2 |
Bos taurus (cattle) | AMIGO1 | NP_001094589.1 |
Xenopus tropicalis (tropical clawed frog) | amigo1 | NP_001072528.1 |
Pan troglodytes (chimpanzee) | AMIGO1 | XP_001150542.1 |
Mus musculus (house mouse) | Amigo1 | NP_666249.2 |
Canis lupus familiaris (dog) | AMIGO1 | XP_005621874.1 |
Rattus norvegicus (Norway rat) | Amigo1 | NP_996764.1 |
AMIGO-Kv2.1 Potassium Channel Complex Is Associated With Schizophrenia-Related Phenotypes.
Peltola MA, Kuja-Panula J, Liuhanen J, V?ikar V, Piepponen P, Hiekkalinna T, Taira T, Lauri SE, Suvisaari J, Kulesskaya N, Paunio T, Rauvala H
Schizophrenia bulletin42(1)191-201(2016 Jan)
New loci associated with kidney function and chronic kidney disease.
K?ttgen A, Pattaro C, B?ger CA, Fuchsberger C, Olden M, Glazer NL, Parsa A, Gao X, Yang Q, Smith AV, O'Connell JR, Li M, Schmidt H, Tanaka T, Isaacs A, Ketkar S, Hwang SJ, Johnson AD, Dehghan A, Teumer A, Par? G, Atkinson EJ, Zeller T, Lohman K, Cornelis MC, Probst-Hensch NM, Kronenberg F, T?njes A, Hayward C, Aspelund T, Eiriksdottir G, Launer LJ, Harris TB, Rampersaud E, Mitchell BD, Arking DE, Boerwinkle E, Struchalin M, Cavalieri M, Singleton A, Giallauria F, Metter J, de Boer IH, Haritunians T, Lumley T, Siscovick D, Psaty BM, Zillikens MC, Oostra BA, Feitosa M, Province M, de Andrade M, Turner ST, Schillert A, Ziegler A, Wild PS, Schnabel RB, Wilde S, Munzel TF, Leak TS, Illig T, Klopp N, Meisinger C, Wichmann HE, Koenig W, Zgaga L, Zemunik T, Kolcic I, Minelli C, Hu FB, Johansson A, Igl W, Zaboli G, Wild SH, Wright AF, Campbell H, Ellinghaus D, Schreiber S, Aulchenko YS, Felix JF, Rivadeneira F, Uitterlinden AG, Hofman A, Imboden M, Nitsch D, Brandst?tter A, Kollerits B, Kedenko L, M?gi R, Stumvoll M, Kovacs P, Boban M, Campbell S, Endlich K, V?lzke H, Kroemer HK, Nauck M, V?lker U, Polasek O, Vitart V, Badola S, Parker AN, Ridker PM, Kardia SL, Blankenberg S, Liu Y, Curhan GC, Franke A, Rochat T, Paulweber B, Prokopenko I, Wang W, Gudnason V, Shuldiner AR, Coresh J, Schmidt R, Ferrucci L, Shlipak MG, van Duijn CM, Borecki I, Kr?mer BK, Rudan I, Gyllensten U, Wilson JF, Witteman JC, Pramstaller PP, Rettig R, Hastie N, Chasman DI, Kao WH, Heid IM, Fox CS
Nature genetics42(5)376-84(2010 May)
AMIGO, a transmembrane protein implicated in axon tract development, defines a novel protein family with leucine-rich repeats.
Kuja-Panula J, Kiiltom?ki M, Yamashiro T, Rouhiainen A, Rauvala H
The Journal of cell biology160(6)963-73(2003 Mar)
GeneRIFs: Gene References Into Functions What's a GeneRIF?
AMIGO1 is identified as a candidate gene for human schizophrenia and related psychiatric disorders.
Title: AMIGO-Kv2.1 Potassium Channel Complex Is Associated With Schizophrenia-Related Phenotypes.
The following AMIGO1 gene cDNA ORF clone sequences were retrieved from the NCBI Reference Sequence Database (RefSeq). These sequences represent the protein coding region of the AMIGO1 cDNA ORF which is encoded by the open reading frame (ORF) sequence. ORF sequences can be delivered in our standard vector, pcDNA3.1+/C-(K)DYK or the vector of your choice as an expression/transfection-ready ORF clone. Not the clone you want? Click here to find your clone.
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CloneID | OHu09916 | |
Clone ID Related Accession (Same CDS sequence) | XM_011541812.2 , NM_020703.2 , NM_020703.3 , NM_020703.4 | |
Accession Version | NM_020703.4 Latest version! | Documents for ORF clone product in default vector |
Sequence Information | ORF Nucleotide Sequence (Length: 1482bp) Protein sequence SNP |
|
Vector | pcDNA3.1-C-(k)DYK or customized vector | User Manual |
Clone information | Clone Map | MSDS |
Tag on pcDNA3.1+/C-(K)DYK | C terminal DYKDDDDK tags | |
ORF Insert Method | CloneEZ™ Seamless cloning technology | |
Insert Structure | linear | |
Update Date | 2019-11-16 | |
Organism | Homo sapiens(human) | |
Product | amphoterin-induced protein 1 precursor | |
Comment | Comment: VALIDATED REFSEQ: This record has undergone validation or preliminary review. The reference sequence was derived from HY122839.1, AK295678.1 and AL355145.31. On Nov 22, 2018 this sequence version replaced NM_020703.3. Sequence Note: This RefSeq record was created from transcript and genomic sequence data to make the sequence consistent with the reference genome assembly. The genomic coordinates used for the transcript record were based on transcript alignments. ##Evidence-Data-START## Transcript exon combination :: SRR1803615.144517.1, SRR1660807.150197.1 [ECO:0000332] RNAseq introns :: single sample supports all introns SAMEA2145544, SAMEA2148093 [ECO:0000348] ##Evidence-Data-END## ##RefSeq-Attributes-START## MANE Ensembl match :: ENST00000369864.5/ ENSP00000358880.4 RefSeq Select criteria :: based on conservation, expression, longest protein ##RefSeq-Attributes-END## COMPLETENESS: full length. |
1 | ATGCACCCCC ACCGTGACCC GAGAGGCCTC TGGCTCCTGC TGCCGTCCTT GTCCCTGCTG |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
RefSeq | NP_065754.2 |
CDS | 396..1877 |
Translation |
Target ORF information:
Target ORF information:
|
NM_020703.4 |
1 | ATGCACCCCC ACCGTGACCC GAGAGGCCTC TGGCTCCTGC TGCCGTCCTT GTCCCTGCTG |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
CloneID | OHu09916 | |
Clone ID Related Accession (Same CDS sequence) | XM_011541812.2 , NM_020703.2 , NM_020703.3 , NM_020703.4 | |
Accession Version | NM_020703.2 | Documents for ORF clone product in default vector |
Sequence Information | ORF Nucleotide Sequence (Length: 1482bp) Protein sequence SNP |
|
Vector | pcDNA3.1-C-(k)DYK or customized vector | User Manual |
Clone information | Clone Map | MSDS |
Tag on pcDNA3.1+/C-(K)DYK | C terminal DYKDDDDK tags | |
ORF Insert Method | CloneEZ™ Seamless cloning technology | |
Insert Structure | linear | |
Update Date | 2017-04-29 | |
Organism | Homo sapiens(Human) | |
Product | amphoterin-induced protein 1 precursor | |
Comment | VALIDATED REFSEQ: This record has undergone validation or preliminary review. The reference sequence was derived from DC317707.1, BC040879.1 and AY237007.1. On Jul 25, 2007 this sequence version replaced NM_020703.1. ##Evidence-Data-START## Transcript exon combination :: BC040879.1, SRR1660803.216833.1 [ECO:0000332] RNAseq introns :: single sample supports all introns SAMEA2145544, SAMEA2148093 [ECO:0000348] ##Evidence-Data-END## |
1 | ATGCACCCCC ACCGTGACCC GAGAGGCCTC TGGCTCCTGC TGCCGTCCTT GTCCCTGCTG |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
RefSeq | NP_065754.2 |
CDS | 383..1864 |
Translation |
Target ORF information:
Target ORF information:
|
NM_020703.2 |
1 | ATGCACCCCC ACCGTGACCC GAGAGGCCTC TGGCTCCTGC TGCCGTCCTT GTCCCTGCTG |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
CloneID | OHu09916 | |
Clone ID Related Accession (Same CDS sequence) | XM_011541812.2 , NM_020703.2 , NM_020703.3 , NM_020703.4 | |
Accession Version | NM_020703.3 | Documents for ORF clone product in default vector |
Sequence Information | ORF Nucleotide Sequence (Length: 1482bp) Protein sequence SNP |
|
Vector | pcDNA3.1-C-(k)DYK or customized vector | User Manual |
Clone information | Clone Map | MSDS |
Tag on pcDNA3.1+/C-(K)DYK | C terminal DYKDDDDK tags | |
ORF Insert Method | CloneEZ™ Seamless cloning technology | |
Insert Structure | linear | |
Update Date | 2017-09-09 | |
Organism | Homo sapiens(human) | |
Product | amphoterin-induced protein 1 precursor | |
Comment | Comment: VALIDATED REFSEQ: This record has undergone validation or preliminary review. The reference sequence was derived from HY122839.1, AK295678.1, AL355145.31 and BM727945.1. On Aug 29, 2017 this sequence version replaced NM_020703.2. Sequence Note: This RefSeq record was created from transcript and genomic sequence data to make the sequence consistent with the reference genome assembly. The genomic coordinates used for the transcript record were based on transcript alignments. ##Evidence-Data-START## Transcript exon combination :: SRR1660803.216833.1, SRR1660807.150197.1 [ECO:0000332] RNAseq introns :: single sample supports all introns SAMEA2145544, SAMEA2148093 [ECO:0000348] ##Evidence-Data-END## |
1 | ATGCACCCCC ACCGTGACCC GAGAGGCCTC TGGCTCCTGC TGCCGTCCTT GTCCCTGCTG |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
RefSeq | NP_065754.2 |
CDS | 420..1901 |
Translation |
Target ORF information:
Target ORF information:
|
NM_020703.3 |
1 | ATGCACCCCC ACCGTGACCC GAGAGGCCTC TGGCTCCTGC TGCCGTCCTT GTCCCTGCTG |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
CloneID | OHu09916 | |
Clone ID Related Accession (Same CDS sequence) | XM_011541812.2 , NM_020703.2 , NM_020703.3 , NM_020703.4 | |
Accession Version | XM_011541812.2 Latest version! | Documents for ORF clone product in default vector |
Sequence Information | ORF Nucleotide Sequence (Length: 1482bp) Protein sequence SNP |
|
Vector | pcDNA3.1-C-(k)DYK or customized vector | User Manual |
Clone information | Clone Map | MSDS |
Tag on pcDNA3.1+/C-(K)DYK | C terminal DYKDDDDK tags | |
ORF Insert Method | CloneEZ™ Seamless cloning technology | |
Insert Structure | linear | |
Update Date | 2019-12-05 | |
Organism | Homo sapiens(human) | |
Product | amphoterin-induced protein 1 isoform X1 | |
Comment | Comment: MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NC_000001.11) annotated using gene prediction method: Gnomon, supported by mRNA and EST evidence. Also see: Documentation of NCBI's Annotation Process On Jun 6, 2016 this sequence version replaced XM_011541812.1. ##Genome-Annotation-Data-START## Annotation Provider :: NCBI Annotation Status :: Updated annotation Annotation Name :: Homo sapiens Updated Annotation Release 109.20191205 Annotation Version :: 109.20191205 Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline Annotation Software Version :: 8.3 Annotation Method :: Best-placed RefSeq; propagated RefSeq model Features Annotated :: Gene; mRNA; CDS; ncRNA ##Genome-Annotation-Data-END## |
1 | ATGCACCCCC ACCGTGACCC GAGAGGCCTC TGGCTCCTGC TGCCGTCCTT GTCCCTGCTG |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
RefSeq | XP_011540114.1 |
CDS | 389..1870 |
Translation |
Target ORF information:
Target ORF information:
|
XM_011541812.2 |
1 | ATGCACCCCC ACCGTGACCC GAGAGGCCTC TGGCTCCTGC TGCCGTCCTT GTCCCTGCTG |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
AMIGO-Kv2.1 Potassium Channel Complex Is Associated With Schizophrenia-Related Phenotypes. |
New loci associated with kidney function and chronic kidney disease. |
AMIGO, a transmembrane protein implicated in axon tract development, defines a novel protein family with leucine-rich repeats. |