Gene Symbol | SPATA5L1 |
Entrez Gene ID | 79029 |
Full Name | spermatogenesis associated 5 like 1 |
General protein information |
|
Gene Type | protein-coding |
Organism | Homo sapiens(human) |
Genome |
ORF » Species Summary » Homo sapiens » SPATA5L1 cDNA ORF clone
gRNAs
Gene Symbol | SPATA5L1 |
Entrez Gene ID | 79029 |
Full Name | spermatogenesis associated 5 like 1 |
General protein information |
|
Gene Type | protein-coding |
Organism | Homo sapiens(human) |
Genome |
mRNA | Protein | Name |
---|---|---|
NM_024063.2 | NP_076968.2 | spermatogenesis-associated protein 5-like protein 1 isoform 1 |
NM_024063.3 | NP_076968.2 | spermatogenesis-associated protein 5-like protein 1 isoform 1 |
NM_001323640.1 | NP_001310569.1 | spermatogenesis-associated protein 5-like protein 1 isoform 2 |
Homo sapiens (human) | SPATA5L1 | NP_076968.2 |
Canis lupus familiaris (dog) | SPATA5L1 | XP_851576.3 |
Danio rerio (zebrafish) | spata5l1 | NP_001070056.2 |
Arabidopsis thaliana (thale cress) | CDC48B | NP_178463.1 |
Oryza sativa (rice) | Os04g0498800 | NP_001053215.1 |
Pan troglodytes (chimpanzee) | SPATA5L1 | XP_001147246.2 |
Mus musculus (house mouse) | Spata5l1 | NP_001028428.2 |
Rattus norvegicus (Norway rat) | Spata5l1 | NP_001103117.1 |
Gallus gallus (chicken) | SPATA5L1 | XP_001232157.3 |
SPATA5L1 | XP_001111759.1 | |
Bos taurus (cattle) | SPATA5L1 | NP_001099095.1 |
Oryza sativa (rice) | Os05g0376200 | NP_001055380.1 |
Using multiple measures for quantitative trait association analyses: application to estimated glomerular filtration rate.
Tin A, Colantuoni E, Boerwinkle E, Kottgen A, Franceschini N, Astor BC, Coresh J, Kao WH
Journal of human genetics58(7)461-6(2013 Jul)
New loci associated with kidney function and chronic kidney disease.
Köttgen A, Pattaro C, Böger CA, Fuchsberger C, Olden M, Glazer NL, Parsa A, Gao X, Yang Q, Smith AV, O'Connell JR, Li M, Schmidt H, Tanaka T, Isaacs A, Ketkar S, Hwang SJ, Johnson AD, Dehghan A, Teumer A, Paré G, Atkinson EJ, Zeller T, Lohman K, Cornelis MC, Probst-Hensch NM, Kronenberg F, Tönjes A, Hayward C, Aspelund T, Eiriksdottir G, Launer LJ, Harris TB, Rampersaud E, Mitchell BD, Arking DE, Boerwinkle E, Struchalin M, Cavalieri M, Singleton A, Giallauria F, Metter J, de Boer IH, Haritunians T, Lumley T, Siscovick D, Psaty BM, Zillikens MC, Oostra BA, Feitosa M, Province M, de Andrade M, Turner ST, Schillert A, Ziegler A, Wild PS, Schnabel RB, Wilde S, Munzel TF, Leak TS, Illig T, Klopp N, Meisinger C, Wichmann HE, Koenig W, Zgaga L, Zemunik T, Kolcic I, Minelli C, Hu FB, Johansson A, Igl W, Zaboli G, Wild SH, Wright AF, Campbell H, Ellinghaus D, Schreiber S, Aulchenko YS, Felix JF, Rivadeneira F, Uitterlinden AG, Hofman A, Imboden M, Nitsch D, Brandstätter A, Kollerits B, Kedenko L, Mägi R, Stumvoll M, Kovacs P, Boban M, Campbell S, Endlich K, Völzke H, Kroemer HK, Nauck M, Völker U, Polasek O, Vitart V, Badola S, Parker AN, Ridker PM, Kardia SL, Blankenberg S, Liu Y, Curhan GC, Franke A, Rochat T, Paulweber B, Prokopenko I, Wang W, Gudnason V, Shuldiner AR, Coresh J, Schmidt R, Ferrucci L, Shlipak MG, van Duijn CM, Borecki I, Krämer BK, Rudan I, Gyllensten U, Wilson JF, Witteman JC, Pramstaller PP, Rettig R, Hastie N, Chasman DI, Kao WH, Heid IM, Fox CS
Nature genetics42(5)376-84(2010 May)
Multiple loci associated with indices of renal function and chronic kidney disease.
Köttgen A, Glazer NL, Dehghan A, Hwang SJ, Katz R, Li M, Yang Q, Gudnason V, Launer LJ, Harris TB, Smith AV, Arking DE, Astor BC, Boerwinkle E, Ehret GB, Ruczinski I, Scharpf RB, Chen YD, de Boer IH, Haritunians T, Lumley T, Sarnak M, Siscovick D, Benjamin EJ, Levy D, Upadhyay A, Aulchenko YS, Hofman A, Rivadeneira F, Uitterlinden AG, van Duijn CM, Chasman DI, Paré G, Ridker PM, Kao WH, Witteman JC, Coresh J, Shlipak MG, Fox CS
Nature genetics41(6)712-7(2009 Jun)
GeneRIFs: Gene References Into Functions What's a GeneRIF?
Observational study, meta-analysis, and genome-wide association study of gene-disease association. (HuGE Navigator)
Title: Multiple loci associated with indices of renal function and chronic kidney disease.
The following SPATA5L1 gene cDNA ORF clone sequences were retrieved from the NCBI Reference Sequence Database (RefSeq). These sequences represent the protein coding region of the SPATA5L1 cDNA ORF which is encoded by the open reading frame (ORF) sequence. ORF sequences can be delivered in our standard vector, pcDNA3.1+/C-(K)DYK or the vector of your choice as an expression/transfection-ready ORF clone. Not the clone you want? Click here to find your clone.
CloneID | OHu12567![]() |
|
Clone ID Related Accession (Same CDS sequence) | NM_024063.2 , NM_024063.3 | |
Accession Version | NM_024063.3 Latest version! | Documents for ORF clone product in default vector |
Sequence Information | ORF Nucleotide Sequence (Length: 2262bp) Protein sequence SNP |
|
Vector | pcDNA3.1-C-(k)DYK or customized vector | ![]() |
Clone information | Clone Map | ![]() |
Tag on pcDNA3.1+/C-(K)DYK | C terminal DYKDDDDK tags | |
ORF Insert Method | CloneEZ™ Seamless cloning technology | |
Insert Structure | linear | |
Update Date | 2019-05-01 | |
Organism | Homo sapiens(human) | |
Product | spermatogenesis-associated protein 5-like protein 1 isoform 1 | |
Comment | Comment: VALIDATED REFSEQ: This record has undergone validation or preliminary review. The reference sequence was derived from DC346759.1, AC025580.8, AK225463.1 and AA451905.1. On Nov 22, 2018 this sequence version replaced NM_024063.2. Transcript Variant: This variant (1) represents the shorter transcript and encodes the functional protein. Sequence Note: This RefSeq record was created from transcript and genomic sequence data to make the sequence consistent with the reference genome assembly. The genomic coordinates used for the transcript record were based on transcript alignments. ##Evidence-Data-START## Transcript exon combination :: BC000981.2, BC051861.2 [ECO:0000332] RNAseq introns :: single sample supports all introns SAMEA1965299, SAMEA1966682 [ECO:0000348] ##Evidence-Data-END## ##RefSeq-Attributes-START## MANE Ensembl match :: ENST00000305560.11/ ENSP00000305494.6 RefSeq Select criteria :: based on conservation, expression, longest protein ##RefSeq-Attributes-END## COMPLETENESS: full length. |
1 | ATGGCTCCGG ACTCGGATCC CTTCCCTGAA GGGCCGCTCT TAAAGCTGCT ACCCTTAGAC |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
RefSeq | NP_076968.2 |
CDS | 95..2356 |
Translation |
Target ORF information:
Target ORF information:
|
![]() |
1 | ATGGCTCCGG ACTCGGATCC CTTCCCTGAA GGGCCGCTCT TAAAGCTGCT ACCCTTAGAC |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
CloneID | OHu101862 | |
Clone ID Related Accession (Same CDS sequence) | NM_001323640.1 | |
Accession Version | NM_001323640.1 Latest version! | Documents for ORF clone product in default vector |
Sequence Information | ORF Nucleotide Sequence (Length: 1863bp) Protein sequence SNP |
|
Vector | pcDNA3.1-C-(k)DYK or customized vector | ![]() |
Clone information | Clone Map | ![]() |
Tag on pcDNA3.1+/C-(K)DYK | C terminal DYKDDDDK tags | |
ORF Insert Method | CloneEZ™ Seamless cloning technology | |
Insert Structure | linear | |
Update Date | 2019-02-24 | |
Organism | Homo sapiens(human) | |
Product | spermatogenesis-associated protein 5-like protein 1 isoform 2 | |
Comment | Comment: VALIDATED REFSEQ: This record has undergone validation or preliminary review. The reference sequence was derived from AC025580.8. Sequence Note: This RefSeq record was created from transcript and genomic sequence data to make the sequence consistent with the reference genome assembly. The genomic coordinates used for the transcript record were based on transcript alignments. ##Evidence-Data-START## Transcript exon combination :: AK291457.1, SRR1803617.68997.1 [ECO:0000332] RNAseq introns :: single sample supports all introns SAMEA1965299, SAMEA1966682 [ECO:0000348] ##Evidence-Data-END## |
1 | ATGGCTCCGG ACTCGGATCC CTTCCCTGAA GGGCCGCTCT TAAAGCTGCT ACCCTTAGAC |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
RefSeq | NP_001310569.1 |
CDS | 110..1972 |
Translation |
Target ORF information:
Target ORF information:
|
![]() |
1 | ATGGCTCCGG ACTCGGATCC CTTCCCTGAA GGGCCGCTCT TAAAGCTGCT ACCCTTAGAC |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
CloneID | OHu12567 | |
Clone ID Related Accession (Same CDS sequence) | NM_024063.2 , NM_024063.3 | |
Accession Version | NM_024063.2 | Documents for ORF clone product in default vector |
Sequence Information | ORF Nucleotide Sequence (Length: 2262bp) Protein sequence SNP |
|
Vector | pcDNA3.1-C-(k)DYK or customized vector | ![]() |
Clone information | Clone Map | ![]() |
Tag on pcDNA3.1+/C-(K)DYK | C terminal DYKDDDDK tags | |
ORF Insert Method | CloneEZ™ Seamless cloning technology | |
Insert Structure | linear | |
Update Date | 2017-10-01 | |
Organism | Homo sapiens(human) | |
Product | spermatogenesis-associated protein 5-like protein 1 isoform 1 | |
Comment | Comment: VALIDATED REFSEQ: This record has undergone validation or preliminary review. The reference sequence was derived from DC346759.1, AC025580.8, AK225463.1 and AA451905.1. On May 7, 2009 this sequence version replaced NM_024063.1. Transcript Variant: This variant (1) represents the shorter transcript and encodes the functional protein. Sequence Note: This RefSeq record was created from transcript and genomic sequence data to make the sequence consistent with the reference genome assembly. The genomic coordinates used for the transcript record were based on transcript alignments. ##Evidence-Data-START## Transcript exon combination :: BC051861.2, BC000981.2 [ECO:0000332] RNAseq introns :: single sample supports all introns SAMEA1965299, SAMEA1966682 [ECO:0000348] ##Evidence-Data-END## COMPLETENESS: complete on the 3' end. |
1 | ATGGCTCCGG ACTCGGATCC CTTCCCTGAA GGGCCGCTCT TAAAGCTGCT ACCCTTAGAC |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
RefSeq | NP_076968.2 |
CDS | 110..2371 |
Translation |
Target ORF information:
Target ORF information:
|
![]() |
1 | ATGGCTCCGG ACTCGGATCC CTTCCCTGAA GGGCCGCTCT TAAAGCTGCT ACCCTTAGAC |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
Using multiple measures for quantitative trait association analyses: application to estimated glomerular filtration rate. |
New loci associated with kidney function and chronic kidney disease. |
Multiple loci associated with indices of renal function and chronic kidney disease. |