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SYDE1 cDNA ORF clone, Homo sapiens(human)

Summary

Gene Symbol SYDE1
Entrez Gene ID 85360
Full Name synapse defective Rho GTPase homolog 1
Synonyms 7h3,SYD1
General protein information
Preferred Names

synapse defective Rho GTPase homolog 1

Names

rho GTPase-activating protein SYDE1
protein syd-1 homolog 1
synapse defective 1, Rho GTPase, homolog 1
synapse defective protein 1 homolog 1
Gene Type protein-coding
Organism Homo sapiens(human)
Genome

19

19p13.12
Summary The protein encoded by this gene is a Rho GTPase-activating protein highly expressed in placenta. The encoded protein is involved in cytoskeletal remodeling and trophoblast cell migration. Decreased expression of this gene has been associated with intrauterine growth restriction (IUGR). [provided by RefSeq, Feb 2017].
Disorder MIM:

617377


Reference Sequences (RefSeq)

mRNA and Protein(s)

mRNA Protein Name
NM_033025.5 NP_149014.3 rho GTPase-activating protein SYDE1 isoform 1
NM_001300910.1 NP_001287839.1 rho GTPase-activating protein SYDE1 isoform 2
XM_024451750.1 XP_024307518.1 rho GTPase-activating protein SYDE1 isoform X1
NM_001300910.2 NP_001287839.1 rho GTPase-activating protein SYDE1 isoform 2
NM_033025.6 NP_149014.3 rho GTPase-activating protein SYDE1 isoform 1

Pathways from BioSystems


Homologies


Homo sapiens (human) SYDE1 NP_149014.3
Pan troglodytes (chimpanzee) SYDE1 XP_003316210.1
Gallus gallus (chicken) SYDE1 XP_427446.4
Canis lupus familiaris (dog) SYDE1 XP_003639825.1
Bos taurus (cattle) SYDE1 XP_002688649.2
Mus musculus (house mouse) Syde1 NP_082151.1
Rattus norvegicus (Norway rat) Syde1 NP_001178805.1
Danio rerio (zebrafish) LOC568166 XP_696571.6

Gene Ontology


Bibliography

Related articles in PubMed

Association of dysfunctional synapse defective 1 (SYDE1) with restricted fetal growth - SYDE1 regulates placental cell migration and invasion.
Lo HF, Tsai CY, Chen CP, Wang LJ, Lee YS, Chen CY, Liang CT, Cheong ML, Chen H
The Journal of pathology241(3)324-336(2017 Feb)

Functional relevance of a six mesenchymal gene signature in epithelial-mesenchymal transition (EMT) reversal by the triple angiokinase inhibitor, nintedanib (BIBF1120).
Huang RY, Kuay KT, Tan TZ, Asad M, Tang HM, Ng AH, Ye J, Chung VY, Thiery JP
Oncotarget6(26)22098-113(2015 Sep)

Analysis of the placental tissue transcriptome of normal and preeclampsia complicated pregnancies.
Trifonova EA, Gabidulina TV, Ershov NI, Serebrova VN, Vorozhishcheva AY, Stepanov VA
Acta naturae6(2)71-83(2014 Apr)

mSYD1A, a mammalian synapse-defective-1 protein, regulates synaptogenic signaling and vesicle docking.
Wentzel C, Sommer JE, Nair R, Stiefvater A, Sibarita JB, Scheiffele P
Neuron78(6)1012-23(2013 Jun)

GeneRIFs: Gene References Into Functions What's a GeneRIF?

a novel mechanism for GCM1 and SYDE1 in regulation of trophoblast cell migration and invasion during placental development
Title: Association of dysfunctional synapse defective 1 (SYDE1) with restricted fetal growth - SYDE1 regulates placental cell migration and invasion.

The following SYDE1 gene cDNA ORF clone sequences were retrieved from the NCBI Reference Sequence Database (RefSeq). These sequences represent the protein coding region of the SYDE1 cDNA ORF which is encoded by the open reading frame (ORF) sequence. ORF sequences can be delivered in our standard vector, pcDNA3.1+/C-(K)DYK or the vector of your choice as an expression/transfection-ready ORF clone. Not the clone you want? Click here to find your clone.

***CloneID Accession No. Definition **Vector *Turnaround time Price (USD) Select
OHu104770 XM_024451750.1
Latest version!		 Homo sapiens synapse defective Rho GTPase homolog 1 (SYDE1), transcript variant X1, mRNA. pcDNA3.1+/C-(K)DYK or customized vector 14-16 $307.30
$439.00
OHu51877 NM_001300910.2
Latest version!		 Homo sapiens synapse defective Rho GTPase homolog 1 (SYDE1), transcript variant 2, mRNA. pcDNA3.1+/C-(K)DYK or customized vector TBD $391.30
$559.00
OHu73945 NM_033025.6
Latest version!		 Homo sapiens synapse defective Rho GTPase homolog 1 (SYDE1), transcript variant 1, mRNA. pcDNA3.1+/C-(K)DYK or customized vector TBD $391.30
$559.00
View Old Accession Versions >>
OHu51877 NM_001300910.1 Homo sapiens synapse defective Rho GTPase homolog 1 (SYDE1), transcript variant 2, mRNA. pcDNA3.1+/C-(K)DYK or customized vector TBD $391.30
$559.00
OHu73945 NM_033025.5 Homo sapiens synapse defective Rho GTPase homolog 1 (SYDE1), transcript variant 1, mRNA. pcDNA3.1+/C-(K)DYK or customized vector TBD $391.30
$559.00
Hide Old Accession Versions >>

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** GenScript guarantees 100% sequence accuracy of all synthetic DNA constructs we deliver, but we do not guarantee protein expression in your experimental system. Protein expression is influenced by many factors that may vary between experiments or laboratories. In addition, please pay attention to the signal peptide, propeptide and transit peptide in target ORF, which may affect the choice of vector (N/C terminal tag vector).

***One clone ID might be correlated to multiple accession numbers, which share the same CDS sequence.

Reference Sequences (Refseq)


CloneID OHu104770
Clone ID Related Accession (Same CDS sequence) XM_024451750.1
Accession Version XM_024451750.1 Latest version! Documents for ORF clone product in default vector
Sequence Information ORF Nucleotide Sequence (Length: 1884bp)
Protein sequence
SNP
Vector pcDNA3.1+/C-(K)DYK or customized vector User Manual
Clone information Clone Map MSDS
Tag on pcDNA3.1+/C-(K)DYK C terminal DYKDDDDK tags
ORF Insert Method CloneEZ™ Seamless cloning technology
Insert Structure linear
Update Date 2019-12-05
Organism Homo sapiens(human)
Product rho GTPase-activating protein SYDE1 isoform X1
Comment Comment: MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NC_000019.10) annotated using gene prediction method: Gnomon, supported by EST evidence. Also see: Documentation of NCBI's Annotation Process ##Genome-Annotation-Data-START## Annotation Provider :: NCBI Annotation Status :: Updated annotation Annotation Name :: Homo sapiens Updated Annotation Release 109.20191205 Annotation Version :: 109.20191205 Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline Annotation Software Version :: 8.3 Annotation Method :: Best-placed RefSeq; propagated RefSeq model Features Annotated :: Gene; mRNA; CDS; ncRNA ##Genome-Annotation-Data-END## 

1
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1561
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ATGGCCGAGC CGCTACTCAG GAAAACCTTC TCCCGCCTGC GGGGCCGGGA GAAACTTCCC 
CGGAAAAAGT CGGACGCCAA GGAGCGCGGC CACCCAGCCC AGCGCCCAGA GCCCAGCCCT 
CCAGAGCCAG AGCCCCAGGC TCCCGAAGGG TCCCAGGCCG GAGCAGAGGG GCCCTCCAGC 
CCCGAGGCAT CAAGGAGCCC TGCACGGGGA GCCTACCTGC AAAGCCTGGA GCCCAGTAGC 
CGCCGATGGG TGCTGGGTGG GGCCAAGCCA GCTGAGGACA CCTCTTTAGG GCCTGGGGTA 
CCTGGCACTG GGGAGCCCGC CGGCGAGATC TGGTACAACC CCATCCCTGA GGAAGACCCC 
AGACCTCCAG CACCTGAGCC CCCGGGGCCA CAGCCTGGCT CAGCTGAGTC AGAGGGCCTG 
GCCCCCCAAG GTGCAGCCCC CGCCAGCCCC CCAACCAAAG CCTCCCGCAC CAAGTCCCCG 
GGCCCCGCCA GGCGCCTCTC CATAAAGATG AAGAAGCTGC CGGAACTGCG GCGCCGCCTG 
AGCCTGCGAG GCCCCCGGGC TGGCAGGGAG CGCGAGAGGG CTGCCCCTGC GGGCTCCGTC 
ATCAGCCGCT ACCACCTGGA CAGCAGCGTG GGGGGCCCCG GGCCGGCAGC AGGGCCTGGG 
GGCACCCGGA GCCCGAGGGC CGGTTACCTC AGCGACGGGG ACTCACCGGA GCGCCCAGCT 
GGGCCCCCAT CACCCACCTC CTTCCGGCCC TACGAGGTGG GTCCCGCAGC CCGGGCACCC 
CCGGCCGCAC TCTGGGGCCG CCTCAGCCTG CACCTGTACG GTCTCGGGGG GCTGCGGCCA 
GCGCCGGGGG CCACCCCCAG GGACCTCTGC TGCCTACTGC AAGTGGATGG GGAGGCCAGG 
GCCCGAACAG GGCCACTGCG AGGGGGGCCG GACTTCCTGC GGCTGGACCA CACCTTCCAC 
CTGGAGCTGG AGGCCGCCAG GCTCCTGCGC GCCCTGGTGC TTGCGTGGGA CCCTGGCGTG 
AGAAGGCACC GGCCCTGTGC CCAGGGCACC GTGCTGCTGC CCACGGTCTT CCGAGGGTGC 
CAGGCCCAAC AGCTGGCCGT GCGCCTGGAG CCTCAGGGGC TGCTGTATGC CAAGCTGACC 
CTGTCGGAGC AGCAGGAAGC CCCTGCCACA GCTGAGCCCC GCGTCTTTGG GCTGCCCCTG 
CCACTGCTGG TGGAGCGGGA GCGGCCCCCC GGCCAGGTGC CCCTCATCAT CCAGAAGTGC 
GTTGGGCAGA TCGAGCGCCG AGGGCTGCGG GTAGTGGGAC TGTACCGTCT TTGTGGCTCA 
GCGGCAGTGA AGAAAGAGCT TCGGGATGCC TTTGAGCGGG ACAGTGCAGC GGTCTGCCTA 
TCTGAGGACC TGTACCCCGA TATCAATGTC ATCACTGGCC ACGCTGACGC TTCTCCTGGA 
CCACCTGCGC CTCGTCTCCT CCTTCCATGC CTACAACCGC ATGACCCCAC AGAACTTGGC 
CGTGTGCTTC GGGCCTGTGC TGCTGCCGGC ACGCCAGGCG CCCACAAGGC CTCGTGCCCG 
CAGCTCCGGC CCAGGCCTTG CCAGTGCAGT GGACTTCAAG CACCACATCG AGGTGCTGCA 
CTACCTGCTG CAGTCTTGGC CAGATCCCCG CCTGCCCCGA CAATCTCCAG ATGTCGCGCC 
TTACTTGCGA CCCAAACGAC AGCCACCTCT GCACCTGCCG CTGGCAGACC CCGAAGTGGT 
GACTCGGCCC CGCGGTCGAG GAGGCCCCGA AAGCCCCCCG AGCAACCGCT ACGCCGGCGA 
CTGGAGCGTT TGCGGGCGGG ACTTCCTGCC CTGTGGGCGG GATTTCCTGT CCGGGCCAGA 
CTACGACCAC GTGACGGGCA GTGA

The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.

RefSeq XP_024307518.1
CDS34..1917
Translation

Target ORF information:

RefSeq Version XM_024451750.1
Organism Homo sapiens(human)
Definition Homo sapiens synapse defective Rho GTPase homolog 1 (SYDE1), transcript variant X1, mRNA.

Target ORF information:

Epitope DYKDDDDK
Bacterial selection AMPR
Mammalian selection NeoR
Vector pcDNA3.1+/C-(K)DYK
 XM_024451750.1

ORF Insert Sequence:

1
61
121
181
241
301
361
421
481
541
601
661
721
781
841
901
961
1021
1081
1141
1201
1261
1321
1381
1441
1501
1561
1621
1681
1741
1801
1861
ATGGCCGAGC CGCTACTCAG GAAAACCTTC TCCCGCCTGC GGGGCCGGGA GAAACTTCCC 
CGGAAAAAGT CGGACGCCAA GGAGCGCGGC CACCCAGCCC AGCGCCCAGA GCCCAGCCCT 
CCAGAGCCAG AGCCCCAGGC TCCCGAAGGG TCCCAGGCCG GAGCAGAGGG GCCCTCCAGC 
CCCGAGGCAT CAAGGAGCCC TGCACGGGGA GCCTACCTGC AAAGCCTGGA GCCCAGTAGC 
CGCCGATGGG TGCTGGGTGG GGCCAAGCCA GCTGAGGACA CCTCTTTAGG GCCTGGGGTA 
CCTGGCACTG GGGAGCCCGC CGGCGAGATC TGGTACAACC CCATCCCTGA GGAAGACCCC 
AGACCTCCAG CACCTGAGCC CCCGGGGCCA CAGCCTGGCT CAGCTGAGTC AGAGGGCCTG 
GCCCCCCAAG GTGCAGCCCC CGCCAGCCCC CCAACCAAAG CCTCCCGCAC CAAGTCCCCG 
GGCCCCGCCA GGCGCCTCTC CATAAAGATG AAGAAGCTGC CGGAACTGCG GCGCCGCCTG 
AGCCTGCGAG GCCCCCGGGC TGGCAGGGAG CGCGAGAGGG CTGCCCCTGC GGGCTCCGTC 
ATCAGCCGCT ACCACCTGGA CAGCAGCGTG GGGGGCCCCG GGCCGGCAGC AGGGCCTGGG 
GGCACCCGGA GCCCGAGGGC CGGTTACCTC AGCGACGGGG ACTCACCGGA GCGCCCAGCT 
GGGCCCCCAT CACCCACCTC CTTCCGGCCC TACGAGGTGG GTCCCGCAGC CCGGGCACCC 
CCGGCCGCAC TCTGGGGCCG CCTCAGCCTG CACCTGTACG GTCTCGGGGG GCTGCGGCCA 
GCGCCGGGGG CCACCCCCAG GGACCTCTGC TGCCTACTGC AAGTGGATGG GGAGGCCAGG 
GCCCGAACAG GGCCACTGCG AGGGGGGCCG GACTTCCTGC GGCTGGACCA CACCTTCCAC 
CTGGAGCTGG AGGCCGCCAG GCTCCTGCGC GCCCTGGTGC TTGCGTGGGA CCCTGGCGTG 
AGAAGGCACC GGCCCTGTGC CCAGGGCACC GTGCTGCTGC CCACGGTCTT CCGAGGGTGC 
CAGGCCCAAC AGCTGGCCGT GCGCCTGGAG CCTCAGGGGC TGCTGTATGC CAAGCTGACC 
CTGTCGGAGC AGCAGGAAGC CCCTGCCACA GCTGAGCCCC GCGTCTTTGG GCTGCCCCTG 
CCACTGCTGG TGGAGCGGGA GCGGCCCCCC GGCCAGGTGC CCCTCATCAT CCAGAAGTGC 
GTTGGGCAGA TCGAGCGCCG AGGGCTGCGG GTAGTGGGAC TGTACCGTCT TTGTGGCTCA 
GCGGCAGTGA AGAAAGAGCT TCGGGATGCC TTTGAGCGGG ACAGTGCAGC GGTCTGCCTA 
TCTGAGGACC TGTACCCCGA TATCAATGTC ATCACTGGCC ACGCTGACGC TTCTCCTGGA 
CCACCTGCGC CTCGTCTCCT CCTTCCATGC CTACAACCGC ATGACCCCAC AGAACTTGGC 
CGTGTGCTTC GGGCCTGTGC TGCTGCCGGC ACGCCAGGCG CCCACAAGGC CTCGTGCCCG 
CAGCTCCGGC CCAGGCCTTG CCAGTGCAGT GGACTTCAAG CACCACATCG AGGTGCTGCA 
CTACCTGCTG CAGTCTTGGC CAGATCCCCG CCTGCCCCGA CAATCTCCAG ATGTCGCGCC 
TTACTTGCGA CCCAAACGAC AGCCACCTCT GCACCTGCCG CTGGCAGACC CCGAAGTGGT 
GACTCGGCCC CGCGGTCGAG GAGGCCCCGA AAGCCCCCCG AGCAACCGCT ACGCCGGCGA 
CTGGAGCGTT TGCGGGCGGG ACTTCCTGCC CTGTGGGCGG GATTTCCTGT CCGGGCCAGA 
CTACGACCAC GTGACGGGCA GTGA

The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.

CloneID OHu51877
Clone ID Related Accession (Same CDS sequence) NM_001300910.1 , NM_001300910.2
Accession Version NM_001300910.1 Documents for ORF clone product in default vector
Sequence Information ORF Nucleotide Sequence (Length: 2007bp)
Protein sequence
SNP
Vector pcDNA3.1+/C-(K)DYK or customized vector User Manual
Clone information Clone Map MSDS
Tag on pcDNA3.1+/C-(K)DYK C terminal DYKDDDDK tags
ORF Insert Method CloneEZ™ Seamless cloning technology
Insert Structure linear
Update Date 2018-06-29
Organism Homo sapiens(human)
Product rho GTPase-activating protein SYDE1 isoform 2
Comment Comment: REVIEWED REFSEQ: This record has been curated by NCBI staff. The reference sequence was derived from HY178244.1, BC029926.1, DB318292.1 and AW134866.1. On Jul 16, 2014 this sequence version replaced XM_005260126.2. Transcript Variant: This variant (2) uses an alternate in-frame splice site in the 5' coding region, compared to variant 1. It encodes isoform 2, which is shorter than isoform 1. ##Evidence-Data-START## Transcript exon combination :: BC029926.1, AK315453.1 [ECO:0000332] RNAseq introns :: single sample supports all introns SAMEA1968189, SAMEA1968540 [ECO:0000348] ##Evidence-Data-END## COMPLETENESS: complete on the 3' end. 

1
61
121
181
241
301
361
421
481
541
601
661
721
781
841
901
961
1021
1081
1141
1201
1261
1321
1381
1441
1501
1561
1621
1681
1741
1801
1861
1921
1981
ATGGCCGAGC CGCTACTCAG GAAAACCTTC TCCCGCCTGC GGGGCCGGGA GAAACTTCCC 
CGGAAAAAGT CGGACGCCAA GGAGCGCGGG CCTGGGGTAC CTGGCACTGG GGAGCCCGCC 
GGCGAGATCT GGTACAACCC CATCCCTGAG GAAGACCCCA GACCTCCAGC ACCTGAGCCC 
CCGGGGCCAC AGCCTGGCTC AGCTGAGTCA GAGGGCCTGG CCCCCCAAGG TGCAGCCCCC 
GCCAGCCCCC CAACCAAAGC CTCCCGCACC AAGTCCCCGG GCCCCGCCAG GCGCCTCTCC 
ATAAAGATGA AGAAGCTGCC GGAACTGCGG CGCCGCCTGA GCCTGCGAGG CCCCCGGGCT 
GGCAGGGAGC GCGAGAGGGC TGCCCCTGCG GGCTCCGTCA TCAGCCGCTA CCACCTGGAC 
AGCAGCGTGG GGGGCCCCGG GCCGGCAGCA GGGCCTGGGG GCACCCGGAG CCCGAGGGCC 
GGTTACCTCA GCGACGGGGA CTCACCGGAG CGCCCAGCTG GGCCCCCATC ACCCACCTCC 
TTCCGGCCCT ACGAGGTGGG TCCCGCAGCC CGGGCACCCC CGGCCGCACT CTGGGGCCGC 
CTCAGCCTGC ACCTGTACGG TCTCGGGGGG CTGCGGCCAG CGCCGGGGGC CACCCCCAGG 
GACCTCTGCT GCCTACTGCA AGTGGATGGG GAGGCCAGGG CCCGAACAGG GCCACTGCGA 
GGGGGGCCGG ACTTCCTGCG GCTGGACCAC ACCTTCCACC TGGAGCTGGA GGCCGCCAGG 
CTCCTGCGCG CCCTGGTGCT TGCGTGGGAC CCTGGCGTGA GAAGGCACCG GCCCTGTGCC 
CAGGGCACCG TGCTGCTGCC CACGGTCTTC CGAGGGTGCC AGGCCCAACA GCTGGCCGTG 
CGCCTGGAGC CTCAGGGGCT GCTGTATGCC AAGCTGACCC TGTCGGAGCA GCAGGAAGCC 
CCTGCCACAG CTGAGCCCCG CGTCTTTGGG CTGCCCCTGC CACTGCTGGT GGAGCGGGAG 
CGGCCCCCCG GCCAGGTGCC CCTCATCATC CAGAAGTGCG TTGGGCAGAT CGAGCGCCGA 
GGGCTGCGGG TAGTGGGACT GTACCGTCTT TGTGGCTCAG CGGCAGTGAA GAAAGAGCTT 
CGGGATGCCT TTGAGCGGGA CAGTGCAGCG GTCTGCCTAT CTGAGGACCT GTACCCCGAT 
ATCAATGTCA TCACTGGCAT CCTCAAGGAT TATCTTCGAG AGTTGCCCAC CCCACTCATC 
ACCCAGCCCC TGTATAAGGT GGTACTGGAG GCCATGGCCC GGGACCCCCC AAACAGAGTT 
CCCCCCACCA CTGAGGGCAC CCGAGGGCTC CTCAGCTGCC TGCCAGATGT GGAAAGGGCC 
ACGCTGACGC TTCTCCTGGA CCACCTGCGC CTCGTCTCCT CCTTCCATGC CTACAACCGC 
ATGACCCCAC AGAACTTGGC CGTGTGCTTC GGGCCTGTGC TGCTGCCGGC ACGCCAGGCG 
CCCACAAGGC CTCGTGCCCG CAGCTCCGGC CCAGGCCTTG CCAGTGCAGT GGACTTCAAG 
CACCACATCG AGGTGCTGCA CTACCTGCTG CAGTCTTGGC CAGATCCCCG CCTGCCCCGA 
CAATCTCCAG ATGTCGCGCC TTACTTGCGA CCCAAACGAC AGCCACCTCT GCACCTGCCG 
CTGGCAGACC CCGAAGTGGT GACTCGGCCC CGCGGTCGAG GAGGCCCCGA AAGCCCCCCG 
AGCAACCGCT ACGCCGGCGA CTGGAGCGTT TGCGGGCGGG ACTTCCTGCC CTGTGGGCGG 
GATTTCCTGT CCGGGCCAGA CTACGACCAC GTGACGGGCA GTGACAGCGA GGACGAGGAC 
GAGGAGGTCG GCGAGCCGAG GGTCACCGGT GACTTCGAAG ACGACTTCGA TGCGCCCTTC 
AACCCGCACC TGAATCTCAA AGACTTCGAC GCCCTCATCC TGGATCTGGA GAGAGAGCTC 
TCCAAGCAAA TCAACGTGTG CCTCTGA

The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.

RefSeq NP_001287839.1
CDS71..2077
Translation

Target ORF information:

RefSeq Version NM_001300910.1
Organism Homo sapiens(human)
Definition Homo sapiens synapse defective Rho GTPase homolog 1 (SYDE1), transcript variant 2, mRNA.

Target ORF information:

Epitope DYKDDDDK
Bacterial selection AMPR
Mammalian selection NeoR
Vector pcDNA3.1+/C-(K)DYK
 NM_001300910.1

ORF Insert Sequence:

1
61
121
181
241
301
361
421
481
541
601
661
721
781
841
901
961
1021
1081
1141
1201
1261
1321
1381
1441
1501
1561
1621
1681
1741
1801
1861
1921
1981
ATGGCCGAGC CGCTACTCAG GAAAACCTTC TCCCGCCTGC GGGGCCGGGA GAAACTTCCC 
CGGAAAAAGT CGGACGCCAA GGAGCGCGGG CCTGGGGTAC CTGGCACTGG GGAGCCCGCC 
GGCGAGATCT GGTACAACCC CATCCCTGAG GAAGACCCCA GACCTCCAGC ACCTGAGCCC 
CCGGGGCCAC AGCCTGGCTC AGCTGAGTCA GAGGGCCTGG CCCCCCAAGG TGCAGCCCCC 
GCCAGCCCCC CAACCAAAGC CTCCCGCACC AAGTCCCCGG GCCCCGCCAG GCGCCTCTCC 
ATAAAGATGA AGAAGCTGCC GGAACTGCGG CGCCGCCTGA GCCTGCGAGG CCCCCGGGCT 
GGCAGGGAGC GCGAGAGGGC TGCCCCTGCG GGCTCCGTCA TCAGCCGCTA CCACCTGGAC 
AGCAGCGTGG GGGGCCCCGG GCCGGCAGCA GGGCCTGGGG GCACCCGGAG CCCGAGGGCC 
GGTTACCTCA GCGACGGGGA CTCACCGGAG CGCCCAGCTG GGCCCCCATC ACCCACCTCC 
TTCCGGCCCT ACGAGGTGGG TCCCGCAGCC CGGGCACCCC CGGCCGCACT CTGGGGCCGC 
CTCAGCCTGC ACCTGTACGG TCTCGGGGGG CTGCGGCCAG CGCCGGGGGC CACCCCCAGG 
GACCTCTGCT GCCTACTGCA AGTGGATGGG GAGGCCAGGG CCCGAACAGG GCCACTGCGA 
GGGGGGCCGG ACTTCCTGCG GCTGGACCAC ACCTTCCACC TGGAGCTGGA GGCCGCCAGG 
CTCCTGCGCG CCCTGGTGCT TGCGTGGGAC CCTGGCGTGA GAAGGCACCG GCCCTGTGCC 
CAGGGCACCG TGCTGCTGCC CACGGTCTTC CGAGGGTGCC AGGCCCAACA GCTGGCCGTG 
CGCCTGGAGC CTCAGGGGCT GCTGTATGCC AAGCTGACCC TGTCGGAGCA GCAGGAAGCC 
CCTGCCACAG CTGAGCCCCG CGTCTTTGGG CTGCCCCTGC CACTGCTGGT GGAGCGGGAG 
CGGCCCCCCG GCCAGGTGCC CCTCATCATC CAGAAGTGCG TTGGGCAGAT CGAGCGCCGA 
GGGCTGCGGG TAGTGGGACT GTACCGTCTT TGTGGCTCAG CGGCAGTGAA GAAAGAGCTT 
CGGGATGCCT TTGAGCGGGA CAGTGCAGCG GTCTGCCTAT CTGAGGACCT GTACCCCGAT 
ATCAATGTCA TCACTGGCAT CCTCAAGGAT TATCTTCGAG AGTTGCCCAC CCCACTCATC 
ACCCAGCCCC TGTATAAGGT GGTACTGGAG GCCATGGCCC GGGACCCCCC AAACAGAGTT 
CCCCCCACCA CTGAGGGCAC CCGAGGGCTC CTCAGCTGCC TGCCAGATGT GGAAAGGGCC 
ACGCTGACGC TTCTCCTGGA CCACCTGCGC CTCGTCTCCT CCTTCCATGC CTACAACCGC 
ATGACCCCAC AGAACTTGGC CGTGTGCTTC GGGCCTGTGC TGCTGCCGGC ACGCCAGGCG 
CCCACAAGGC CTCGTGCCCG CAGCTCCGGC CCAGGCCTTG CCAGTGCAGT GGACTTCAAG 
CACCACATCG AGGTGCTGCA CTACCTGCTG CAGTCTTGGC CAGATCCCCG CCTGCCCCGA 
CAATCTCCAG ATGTCGCGCC TTACTTGCGA CCCAAACGAC AGCCACCTCT GCACCTGCCG 
CTGGCAGACC CCGAAGTGGT GACTCGGCCC CGCGGTCGAG GAGGCCCCGA AAGCCCCCCG 
AGCAACCGCT ACGCCGGCGA CTGGAGCGTT TGCGGGCGGG ACTTCCTGCC CTGTGGGCGG 
GATTTCCTGT CCGGGCCAGA CTACGACCAC GTGACGGGCA GTGACAGCGA GGACGAGGAC 
GAGGAGGTCG GCGAGCCGAG GGTCACCGGT GACTTCGAAG ACGACTTCGA TGCGCCCTTC 
AACCCGCACC TGAATCTCAA AGACTTCGAC GCCCTCATCC TGGATCTGGA GAGAGAGCTC 
TCCAAGCAAA TCAACGTGTG CCTCTGA

The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.

CloneID OHu51877
Clone ID Related Accession (Same CDS sequence) NM_001300910.1 , NM_001300910.2
Accession Version NM_001300910.2 Latest version! Documents for ORF clone product in default vector
Sequence Information ORF Nucleotide Sequence (Length: 2007bp)
Protein sequence
SNP
Vector pcDNA3.1+/C-(K)DYK or customized vector User Manual
Clone information Clone Map MSDS
Tag on pcDNA3.1+/C-(K)DYK C terminal DYKDDDDK tags
ORF Insert Method CloneEZ™ Seamless cloning technology
Insert Structure linear
Update Date 2019-05-31
Organism Homo sapiens(human)
Product rho GTPase-activating protein SYDE1 isoform 2
Comment Comment: REVIEWED REFSEQ: This record has been curated by NCBI staff. The reference sequence was derived from AC004794.1. On Jun 1, 2019 this sequence version replaced NM_001300910.1. Transcript Variant: This variant (2) uses an alternate in-frame splice site in the 5' coding region, compared to variant 1. It encodes isoform 2, which is shorter than isoform 1. ##Evidence-Data-START## Transcript exon combination :: BC029926.1, AK315453.1 [ECO:0000332] RNAseq introns :: single sample supports all introns SAMEA1968189, SAMEA1968540 [ECO:0000348] ##Evidence-Data-END## COMPLETENESS: complete on the 3' end. 

1
61
121
181
241
301
361
421
481
541
601
661
721
781
841
901
961
1021
1081
1141
1201
1261
1321
1381
1441
1501
1561
1621
1681
1741
1801
1861
1921
1981
ATGGCCGAGC CGCTACTCAG GAAAACCTTC TCCCGCCTGC GGGGCCGGGA GAAACTTCCC 
CGGAAAAAGT CGGACGCCAA GGAGCGCGGG CCTGGGGTAC CTGGCACTGG GGAGCCCGCC 
GGCGAGATCT GGTACAACCC CATCCCTGAG GAAGACCCCA GACCTCCAGC ACCTGAGCCC 
CCGGGGCCAC AGCCTGGCTC AGCTGAGTCA GAGGGCCTGG CCCCCCAAGG TGCAGCCCCC 
GCCAGCCCCC CAACCAAAGC CTCCCGCACC AAGTCCCCGG GCCCCGCCAG GCGCCTCTCC 
ATAAAGATGA AGAAGCTGCC GGAACTGCGG CGCCGCCTGA GCCTGCGAGG CCCCCGGGCT 
GGCAGGGAGC GCGAGAGGGC TGCCCCTGCG GGCTCCGTCA TCAGCCGCTA CCACCTGGAC 
AGCAGCGTGG GGGGCCCCGG GCCGGCAGCA GGGCCTGGGG GCACCCGGAG CCCGAGGGCC 
GGTTACCTCA GCGACGGGGA CTCACCGGAG CGCCCAGCTG GGCCCCCATC ACCCACCTCC 
TTCCGGCCCT ACGAGGTGGG TCCCGCAGCC CGGGCACCCC CGGCCGCACT CTGGGGCCGC 
CTCAGCCTGC ACCTGTACGG TCTCGGGGGG CTGCGGCCAG CGCCGGGGGC CACCCCCAGG 
GACCTCTGCT GCCTACTGCA AGTGGATGGG GAGGCCAGGG CCCGAACAGG GCCACTGCGA 
GGGGGGCCGG ACTTCCTGCG GCTGGACCAC ACCTTCCACC TGGAGCTGGA GGCCGCCAGG 
CTCCTGCGCG CCCTGGTGCT TGCGTGGGAC CCTGGCGTGA GAAGGCACCG GCCCTGTGCC 
CAGGGCACCG TGCTGCTGCC CACGGTCTTC CGAGGGTGCC AGGCCCAACA GCTGGCCGTG 
CGCCTGGAGC CTCAGGGGCT GCTGTATGCC AAGCTGACCC TGTCGGAGCA GCAGGAAGCC 
CCTGCCACAG CTGAGCCCCG CGTCTTTGGG CTGCCCCTGC CACTGCTGGT GGAGCGGGAG 
CGGCCCCCCG GCCAGGTGCC CCTCATCATC CAGAAGTGCG TTGGGCAGAT CGAGCGCCGA 
GGGCTGCGGG TAGTGGGACT GTACCGTCTT TGTGGCTCAG CGGCAGTGAA GAAAGAGCTT 
CGGGATGCCT TTGAGCGGGA CAGTGCAGCG GTCTGCCTAT CTGAGGACCT GTACCCCGAT 
ATCAATGTCA TCACTGGCAT CCTCAAGGAT TATCTTCGAG AGTTGCCCAC CCCACTCATC 
ACCCAGCCCC TGTATAAGGT GGTACTGGAG GCCATGGCCC GGGACCCCCC AAACAGAGTT 
CCCCCCACCA CTGAGGGCAC CCGAGGGCTC CTCAGCTGCC TGCCAGATGT GGAAAGGGCC 
ACGCTGACGC TTCTCCTGGA CCACCTGCGC CTCGTCTCCT CCTTCCATGC CTACAACCGC 
ATGACCCCAC AGAACTTGGC CGTGTGCTTC GGGCCTGTGC TGCTGCCGGC ACGCCAGGCG 
CCCACAAGGC CTCGTGCCCG CAGCTCCGGC CCAGGCCTTG CCAGTGCAGT GGACTTCAAG 
CACCACATCG AGGTGCTGCA CTACCTGCTG CAGTCTTGGC CAGATCCCCG CCTGCCCCGA 
CAATCTCCAG ATGTCGCGCC TTACTTGCGA CCCAAACGAC AGCCACCTCT GCACCTGCCG 
CTGGCAGACC CCGAAGTGGT GACTCGGCCC CGCGGTCGAG GAGGCCCCGA AAGCCCCCCG 
AGCAACCGCT ACGCCGGCGA CTGGAGCGTT TGCGGGCGGG ACTTCCTGCC CTGTGGGCGG 
GATTTCCTGT CCGGGCCAGA CTACGACCAC GTGACGGGCA GTGACAGCGA GGACGAGGAC 
GAGGAGGTCG GCGAGCCGAG GGTCACCGGT GACTTCGAAG ACGACTTCGA TGCGCCCTTC 
AACCCGCACC TGAATCTCAA AGACTTCGAC GCCCTCATCC TGGATCTGGA GAGAGAGCTC 
TCCAAGCAAA TCAACGTGTG CCTCTGA

The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.

RefSeq NP_001287839.1
CDS34..2040
Translation

Target ORF information:

RefSeq Version NM_001300910.2
Organism Homo sapiens(human)
Definition Homo sapiens synapse defective Rho GTPase homolog 1 (SYDE1), transcript variant 2, mRNA.

Target ORF information:

Epitope DYKDDDDK
Bacterial selection AMPR
Mammalian selection NeoR
Vector pcDNA3.1+/C-(K)DYK
 NM_001300910.2

ORF Insert Sequence:

1
61
121
181
241
301
361
421
481
541
601
661
721
781
841
901
961
1021
1081
1141
1201
1261
1321
1381
1441
1501
1561
1621
1681
1741
1801
1861
1921
1981
ATGGCCGAGC CGCTACTCAG GAAAACCTTC TCCCGCCTGC GGGGCCGGGA GAAACTTCCC 
CGGAAAAAGT CGGACGCCAA GGAGCGCGGG CCTGGGGTAC CTGGCACTGG GGAGCCCGCC 
GGCGAGATCT GGTACAACCC CATCCCTGAG GAAGACCCCA GACCTCCAGC ACCTGAGCCC 
CCGGGGCCAC AGCCTGGCTC AGCTGAGTCA GAGGGCCTGG CCCCCCAAGG TGCAGCCCCC 
GCCAGCCCCC CAACCAAAGC CTCCCGCACC AAGTCCCCGG GCCCCGCCAG GCGCCTCTCC 
ATAAAGATGA AGAAGCTGCC GGAACTGCGG CGCCGCCTGA GCCTGCGAGG CCCCCGGGCT 
GGCAGGGAGC GCGAGAGGGC TGCCCCTGCG GGCTCCGTCA TCAGCCGCTA CCACCTGGAC 
AGCAGCGTGG GGGGCCCCGG GCCGGCAGCA GGGCCTGGGG GCACCCGGAG CCCGAGGGCC 
GGTTACCTCA GCGACGGGGA CTCACCGGAG CGCCCAGCTG GGCCCCCATC ACCCACCTCC 
TTCCGGCCCT ACGAGGTGGG TCCCGCAGCC CGGGCACCCC CGGCCGCACT CTGGGGCCGC 
CTCAGCCTGC ACCTGTACGG TCTCGGGGGG CTGCGGCCAG CGCCGGGGGC CACCCCCAGG 
GACCTCTGCT GCCTACTGCA AGTGGATGGG GAGGCCAGGG CCCGAACAGG GCCACTGCGA 
GGGGGGCCGG ACTTCCTGCG GCTGGACCAC ACCTTCCACC TGGAGCTGGA GGCCGCCAGG 
CTCCTGCGCG CCCTGGTGCT TGCGTGGGAC CCTGGCGTGA GAAGGCACCG GCCCTGTGCC 
CAGGGCACCG TGCTGCTGCC CACGGTCTTC CGAGGGTGCC AGGCCCAACA GCTGGCCGTG 
CGCCTGGAGC CTCAGGGGCT GCTGTATGCC AAGCTGACCC TGTCGGAGCA GCAGGAAGCC 
CCTGCCACAG CTGAGCCCCG CGTCTTTGGG CTGCCCCTGC CACTGCTGGT GGAGCGGGAG 
CGGCCCCCCG GCCAGGTGCC CCTCATCATC CAGAAGTGCG TTGGGCAGAT CGAGCGCCGA 
GGGCTGCGGG TAGTGGGACT GTACCGTCTT TGTGGCTCAG CGGCAGTGAA GAAAGAGCTT 
CGGGATGCCT TTGAGCGGGA CAGTGCAGCG GTCTGCCTAT CTGAGGACCT GTACCCCGAT 
ATCAATGTCA TCACTGGCAT CCTCAAGGAT TATCTTCGAG AGTTGCCCAC CCCACTCATC 
ACCCAGCCCC TGTATAAGGT GGTACTGGAG GCCATGGCCC GGGACCCCCC AAACAGAGTT 
CCCCCCACCA CTGAGGGCAC CCGAGGGCTC CTCAGCTGCC TGCCAGATGT GGAAAGGGCC 
ACGCTGACGC TTCTCCTGGA CCACCTGCGC CTCGTCTCCT CCTTCCATGC CTACAACCGC 
ATGACCCCAC AGAACTTGGC CGTGTGCTTC GGGCCTGTGC TGCTGCCGGC ACGCCAGGCG 
CCCACAAGGC CTCGTGCCCG CAGCTCCGGC CCAGGCCTTG CCAGTGCAGT GGACTTCAAG 
CACCACATCG AGGTGCTGCA CTACCTGCTG CAGTCTTGGC CAGATCCCCG CCTGCCCCGA 
CAATCTCCAG ATGTCGCGCC TTACTTGCGA CCCAAACGAC AGCCACCTCT GCACCTGCCG 
CTGGCAGACC CCGAAGTGGT GACTCGGCCC CGCGGTCGAG GAGGCCCCGA AAGCCCCCCG 
AGCAACCGCT ACGCCGGCGA CTGGAGCGTT TGCGGGCGGG ACTTCCTGCC CTGTGGGCGG 
GATTTCCTGT CCGGGCCAGA CTACGACCAC GTGACGGGCA GTGACAGCGA GGACGAGGAC 
GAGGAGGTCG GCGAGCCGAG GGTCACCGGT GACTTCGAAG ACGACTTCGA TGCGCCCTTC 
AACCCGCACC TGAATCTCAA AGACTTCGAC GCCCTCATCC TGGATCTGGA GAGAGAGCTC 
TCCAAGCAAA TCAACGTGTG CCTCTGA

The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.

CloneID OHu73945
Clone ID Related Accession (Same CDS sequence) NM_033025.5 , NM_033025.6
Accession Version NM_033025.5 Documents for ORF clone product in default vector
Sequence Information ORF Nucleotide Sequence (Length: 2208bp)
Protein sequence
SNP
Vector pcDNA3.1+/C-(K)DYK or customized vector User Manual
Clone information Clone Map MSDS
Tag on pcDNA3.1+/C-(K)DYK C terminal DYKDDDDK tags
ORF Insert Method CloneEZ™ Seamless cloning technology
Insert Structure linear
Update Date 2017-10-02
Organism Homo sapiens(human)
Product rho GTPase-activating protein SYDE1 isoform 1
Comment Comment: REVIEWED REFSEQ: This record has been curated by NCBI staff. The reference sequence was derived from HY178244.1, AK123686.1, BC029926.1, DB318292.1 and AW134866.1. On Jul 16, 2014 this sequence version replaced NM_033025.4. Transcript Variant: This variant (1) represents the longer transcript and encodes the longer isoform (1). ##Evidence-Data-START## Transcript exon combination :: AK123686.1 [ECO:0000332] RNAseq introns :: single sample supports all introns SAMEA1968189, SAMEA1968540 [ECO:0000348] ##Evidence-Data-END## COMPLETENESS: complete on the 3' end. 

1
61
121
181
241
301
361
421
481
541
601
661
721
781
841
901
961
1021
1081
1141
1201
1261
1321
1381
1441
1501
1561
1621
1681
1741
1801
1861
1921
1981
2041
2101
2161
ATGGCCGAGC CGCTACTCAG GAAAACCTTC TCCCGCCTGC GGGGCCGGGA GAAACTTCCC 
CGGAAAAAGT CGGACGCCAA GGAGCGCGGC CACCCAGCCC AGCGCCCAGA GCCCAGCCCT 
CCAGAGCCAG AGCCCCAGGC TCCCGAAGGG TCCCAGGCCG GAGCAGAGGG GCCCTCCAGC 
CCCGAGGCAT CAAGGAGCCC TGCACGGGGA GCCTACCTGC AAAGCCTGGA GCCCAGTAGC 
CGCCGATGGG TGCTGGGTGG GGCCAAGCCA GCTGAGGACA CCTCTTTAGG GCCTGGGGTA 
CCTGGCACTG GGGAGCCCGC CGGCGAGATC TGGTACAACC CCATCCCTGA GGAAGACCCC 
AGACCTCCAG CACCTGAGCC CCCGGGGCCA CAGCCTGGCT CAGCTGAGTC AGAGGGCCTG 
GCCCCCCAAG GTGCAGCCCC CGCCAGCCCC CCAACCAAAG CCTCCCGCAC CAAGTCCCCG 
GGCCCCGCCA GGCGCCTCTC CATAAAGATG AAGAAGCTGC CGGAACTGCG GCGCCGCCTG 
AGCCTGCGAG GCCCCCGGGC TGGCAGGGAG CGCGAGAGGG CTGCCCCTGC GGGCTCCGTC 
ATCAGCCGCT ACCACCTGGA CAGCAGCGTG GGGGGCCCCG GGCCGGCAGC AGGGCCTGGG 
GGCACCCGGA GCCCGAGGGC CGGTTACCTC AGCGACGGGG ACTCACCGGA GCGCCCAGCT 
GGGCCCCCAT CACCCACCTC CTTCCGGCCC TACGAGGTGG GTCCCGCAGC CCGGGCACCC 
CCGGCCGCAC TCTGGGGCCG CCTCAGCCTG CACCTGTACG GTCTCGGGGG GCTGCGGCCA 
GCGCCGGGGG CCACCCCCAG GGACCTCTGC TGCCTACTGC AAGTGGATGG GGAGGCCAGG 
GCCCGAACAG GGCCACTGCG AGGGGGGCCG GACTTCCTGC GGCTGGACCA CACCTTCCAC 
CTGGAGCTGG AGGCCGCCAG GCTCCTGCGC GCCCTGGTGC TTGCGTGGGA CCCTGGCGTG 
AGAAGGCACC GGCCCTGTGC CCAGGGCACC GTGCTGCTGC CCACGGTCTT CCGAGGGTGC 
CAGGCCCAAC AGCTGGCCGT GCGCCTGGAG CCTCAGGGGC TGCTGTATGC CAAGCTGACC 
CTGTCGGAGC AGCAGGAAGC CCCTGCCACA GCTGAGCCCC GCGTCTTTGG GCTGCCCCTG 
CCACTGCTGG TGGAGCGGGA GCGGCCCCCC GGCCAGGTGC CCCTCATCAT CCAGAAGTGC 
GTTGGGCAGA TCGAGCGCCG AGGGCTGCGG GTAGTGGGAC TGTACCGTCT TTGTGGCTCA 
GCGGCAGTGA AGAAAGAGCT TCGGGATGCC TTTGAGCGGG ACAGTGCAGC GGTCTGCCTA 
TCTGAGGACC TGTACCCCGA TATCAATGTC ATCACTGGCA TCCTCAAGGA TTATCTTCGA 
GAGTTGCCCA CCCCACTCAT CACCCAGCCC CTGTATAAGG TGGTACTGGA GGCCATGGCC 
CGGGACCCCC CAAACAGAGT TCCCCCCACC ACTGAGGGCA CCCGAGGGCT CCTCAGCTGC 
CTGCCAGATG TGGAAAGGGC CACGCTGACG CTTCTCCTGG ACCACCTGCG CCTCGTCTCC 
TCCTTCCATG CCTACAACCG CATGACCCCA CAGAACTTGG CCGTGTGCTT CGGGCCTGTG 
CTGCTGCCGG CACGCCAGGC GCCCACAAGG CCTCGTGCCC GCAGCTCCGG CCCAGGCCTT 
GCCAGTGCAG TGGACTTCAA GCACCACATC GAGGTGCTGC ACTACCTGCT GCAGTCTTGG 
CCAGATCCCC GCCTGCCCCG ACAATCTCCA GATGTCGCGC CTTACTTGCG ACCCAAACGA 
CAGCCACCTC TGCACCTGCC GCTGGCAGAC CCCGAAGTGG TGACTCGGCC CCGCGGTCGA 
GGAGGCCCCG AAAGCCCCCC GAGCAACCGC TACGCCGGCG ACTGGAGCGT TTGCGGGCGG 
GACTTCCTGC CCTGTGGGCG GGATTTCCTG TCCGGGCCAG ACTACGACCA CGTGACGGGC 
AGTGACAGCG AGGACGAGGA CGAGGAGGTC GGCGAGCCGA GGGTCACCGG TGACTTCGAA 
GACGACTTCG ATGCGCCCTT CAACCCGCAC CTGAATCTCA AAGACTTCGA CGCCCTCATC 
CTGGATCTGG AGAGAGAGCT CTCCAAGCAA ATCAACGTGT GCCTCTGA

The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.

RefSeq NP_149014.3
CDS71..2278
Translation

Target ORF information:

RefSeq Version NM_033025.5
Organism Homo sapiens(human)
Definition Homo sapiens synapse defective Rho GTPase homolog 1 (SYDE1), transcript variant 1, mRNA.

Target ORF information:

Epitope DYKDDDDK
Bacterial selection AMPR
Mammalian selection NeoR
Vector pcDNA3.1+/C-(K)DYK
 NM_033025.5

ORF Insert Sequence:

1
61
121
181
241
301
361
421
481
541
601
661
721
781
841
901
961
1021
1081
1141
1201
1261
1321
1381
1441
1501
1561
1621
1681
1741
1801
1861
1921
1981
2041
2101
2161
ATGGCCGAGC CGCTACTCAG GAAAACCTTC TCCCGCCTGC GGGGCCGGGA GAAACTTCCC 
CGGAAAAAGT CGGACGCCAA GGAGCGCGGC CACCCAGCCC AGCGCCCAGA GCCCAGCCCT 
CCAGAGCCAG AGCCCCAGGC TCCCGAAGGG TCCCAGGCCG GAGCAGAGGG GCCCTCCAGC 
CCCGAGGCAT CAAGGAGCCC TGCACGGGGA GCCTACCTGC AAAGCCTGGA GCCCAGTAGC 
CGCCGATGGG TGCTGGGTGG GGCCAAGCCA GCTGAGGACA CCTCTTTAGG GCCTGGGGTA 
CCTGGCACTG GGGAGCCCGC CGGCGAGATC TGGTACAACC CCATCCCTGA GGAAGACCCC 
AGACCTCCAG CACCTGAGCC CCCGGGGCCA CAGCCTGGCT CAGCTGAGTC AGAGGGCCTG 
GCCCCCCAAG GTGCAGCCCC CGCCAGCCCC CCAACCAAAG CCTCCCGCAC CAAGTCCCCG 
GGCCCCGCCA GGCGCCTCTC CATAAAGATG AAGAAGCTGC CGGAACTGCG GCGCCGCCTG 
AGCCTGCGAG GCCCCCGGGC TGGCAGGGAG CGCGAGAGGG CTGCCCCTGC GGGCTCCGTC 
ATCAGCCGCT ACCACCTGGA CAGCAGCGTG GGGGGCCCCG GGCCGGCAGC AGGGCCTGGG 
GGCACCCGGA GCCCGAGGGC CGGTTACCTC AGCGACGGGG ACTCACCGGA GCGCCCAGCT 
GGGCCCCCAT CACCCACCTC CTTCCGGCCC TACGAGGTGG GTCCCGCAGC CCGGGCACCC 
CCGGCCGCAC TCTGGGGCCG CCTCAGCCTG CACCTGTACG GTCTCGGGGG GCTGCGGCCA 
GCGCCGGGGG CCACCCCCAG GGACCTCTGC TGCCTACTGC AAGTGGATGG GGAGGCCAGG 
GCCCGAACAG GGCCACTGCG AGGGGGGCCG GACTTCCTGC GGCTGGACCA CACCTTCCAC 
CTGGAGCTGG AGGCCGCCAG GCTCCTGCGC GCCCTGGTGC TTGCGTGGGA CCCTGGCGTG 
AGAAGGCACC GGCCCTGTGC CCAGGGCACC GTGCTGCTGC CCACGGTCTT CCGAGGGTGC 
CAGGCCCAAC AGCTGGCCGT GCGCCTGGAG CCTCAGGGGC TGCTGTATGC CAAGCTGACC 
CTGTCGGAGC AGCAGGAAGC CCCTGCCACA GCTGAGCCCC GCGTCTTTGG GCTGCCCCTG 
CCACTGCTGG TGGAGCGGGA GCGGCCCCCC GGCCAGGTGC CCCTCATCAT CCAGAAGTGC 
GTTGGGCAGA TCGAGCGCCG AGGGCTGCGG GTAGTGGGAC TGTACCGTCT TTGTGGCTCA 
GCGGCAGTGA AGAAAGAGCT TCGGGATGCC TTTGAGCGGG ACAGTGCAGC GGTCTGCCTA 
TCTGAGGACC TGTACCCCGA TATCAATGTC ATCACTGGCA TCCTCAAGGA TTATCTTCGA 
GAGTTGCCCA CCCCACTCAT CACCCAGCCC CTGTATAAGG TGGTACTGGA GGCCATGGCC 
CGGGACCCCC CAAACAGAGT TCCCCCCACC ACTGAGGGCA CCCGAGGGCT CCTCAGCTGC 
CTGCCAGATG TGGAAAGGGC CACGCTGACG CTTCTCCTGG ACCACCTGCG CCTCGTCTCC 
TCCTTCCATG CCTACAACCG CATGACCCCA CAGAACTTGG CCGTGTGCTT CGGGCCTGTG 
CTGCTGCCGG CACGCCAGGC GCCCACAAGG CCTCGTGCCC GCAGCTCCGG CCCAGGCCTT 
GCCAGTGCAG TGGACTTCAA GCACCACATC GAGGTGCTGC ACTACCTGCT GCAGTCTTGG 
CCAGATCCCC GCCTGCCCCG ACAATCTCCA GATGTCGCGC CTTACTTGCG ACCCAAACGA 
CAGCCACCTC TGCACCTGCC GCTGGCAGAC CCCGAAGTGG TGACTCGGCC CCGCGGTCGA 
GGAGGCCCCG AAAGCCCCCC GAGCAACCGC TACGCCGGCG ACTGGAGCGT TTGCGGGCGG 
GACTTCCTGC CCTGTGGGCG GGATTTCCTG TCCGGGCCAG ACTACGACCA CGTGACGGGC 
AGTGACAGCG AGGACGAGGA CGAGGAGGTC GGCGAGCCGA GGGTCACCGG TGACTTCGAA 
GACGACTTCG ATGCGCCCTT CAACCCGCAC CTGAATCTCA AAGACTTCGA CGCCCTCATC 
CTGGATCTGG AGAGAGAGCT CTCCAAGCAA ATCAACGTGT GCCTCTGA

The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.

CloneID OHu73945
Clone ID Related Accession (Same CDS sequence) NM_033025.5 , NM_033025.6
Accession Version NM_033025.6 Latest version! Documents for ORF clone product in default vector
Sequence Information ORF Nucleotide Sequence (Length: 2208bp)
Protein sequence
SNP
Vector pcDNA3.1+/C-(K)DYK or customized vector User Manual
Clone information Clone Map MSDS
Tag on pcDNA3.1+/C-(K)DYK C terminal DYKDDDDK tags
ORF Insert Method CloneEZ™ Seamless cloning technology
Insert Structure linear
Update Date 2019-05-01
Organism Homo sapiens(human)
Product rho GTPase-activating protein SYDE1 isoform 1
Comment Comment: REVIEWED REFSEQ: This record has been curated by NCBI staff. The reference sequence was derived from AC004794.1. On Nov 23, 2018 this sequence version replaced NM_033025.5. Transcript Variant: This variant (1) represents the longer transcript and encodes the longer isoform (1). ##Evidence-Data-START## Transcript exon combination :: AK123686.1 [ECO:0000332] RNAseq introns :: single sample supports all introns SAMEA1968189, SAMEA1968540 [ECO:0000348] ##Evidence-Data-END## ##RefSeq-Attributes-START## MANE Ensembl match :: ENST00000342784.7/ ENSP00000341489.1 RefSeq Select criteria :: based on conservation, expression, longest protein ##RefSeq-Attributes-END## COMPLETENESS: full length. 

1
61
121
181
241
301
361
421
481
541
601
661
721
781
841
901
961
1021
1081
1141
1201
1261
1321
1381
1441
1501
1561
1621
1681
1741
1801
1861
1921
1981
2041
2101
2161
ATGGCCGAGC CGCTACTCAG GAAAACCTTC TCCCGCCTGC GGGGCCGGGA GAAACTTCCC 
CGGAAAAAGT CGGACGCCAA GGAGCGCGGC CACCCAGCCC AGCGCCCAGA GCCCAGCCCT 
CCAGAGCCAG AGCCCCAGGC TCCCGAAGGG TCCCAGGCCG GAGCAGAGGG GCCCTCCAGC 
CCCGAGGCAT CAAGGAGCCC TGCACGGGGA GCCTACCTGC AAAGCCTGGA GCCCAGTAGC 
CGCCGATGGG TGCTGGGTGG GGCCAAGCCA GCTGAGGACA CCTCTTTAGG GCCTGGGGTA 
CCTGGCACTG GGGAGCCCGC CGGCGAGATC TGGTACAACC CCATCCCTGA GGAAGACCCC 
AGACCTCCAG CACCTGAGCC CCCGGGGCCA CAGCCTGGCT CAGCTGAGTC AGAGGGCCTG 
GCCCCCCAAG GTGCAGCCCC CGCCAGCCCC CCAACCAAAG CCTCCCGCAC CAAGTCCCCG 
GGCCCCGCCA GGCGCCTCTC CATAAAGATG AAGAAGCTGC CGGAACTGCG GCGCCGCCTG 
AGCCTGCGAG GCCCCCGGGC TGGCAGGGAG CGCGAGAGGG CTGCCCCTGC GGGCTCCGTC 
ATCAGCCGCT ACCACCTGGA CAGCAGCGTG GGGGGCCCCG GGCCGGCAGC AGGGCCTGGG 
GGCACCCGGA GCCCGAGGGC CGGTTACCTC AGCGACGGGG ACTCACCGGA GCGCCCAGCT 
GGGCCCCCAT CACCCACCTC CTTCCGGCCC TACGAGGTGG GTCCCGCAGC CCGGGCACCC 
CCGGCCGCAC TCTGGGGCCG CCTCAGCCTG CACCTGTACG GTCTCGGGGG GCTGCGGCCA 
GCGCCGGGGG CCACCCCCAG GGACCTCTGC TGCCTACTGC AAGTGGATGG GGAGGCCAGG 
GCCCGAACAG GGCCACTGCG AGGGGGGCCG GACTTCCTGC GGCTGGACCA CACCTTCCAC 
CTGGAGCTGG AGGCCGCCAG GCTCCTGCGC GCCCTGGTGC TTGCGTGGGA CCCTGGCGTG 
AGAAGGCACC GGCCCTGTGC CCAGGGCACC GTGCTGCTGC CCACGGTCTT CCGAGGGTGC 
CAGGCCCAAC AGCTGGCCGT GCGCCTGGAG CCTCAGGGGC TGCTGTATGC CAAGCTGACC 
CTGTCGGAGC AGCAGGAAGC CCCTGCCACA GCTGAGCCCC GCGTCTTTGG GCTGCCCCTG 
CCACTGCTGG TGGAGCGGGA GCGGCCCCCC GGCCAGGTGC CCCTCATCAT CCAGAAGTGC 
GTTGGGCAGA TCGAGCGCCG AGGGCTGCGG GTAGTGGGAC TGTACCGTCT TTGTGGCTCA 
GCGGCAGTGA AGAAAGAGCT TCGGGATGCC TTTGAGCGGG ACAGTGCAGC GGTCTGCCTA 
TCTGAGGACC TGTACCCCGA TATCAATGTC ATCACTGGCA TCCTCAAGGA TTATCTTCGA 
GAGTTGCCCA CCCCACTCAT CACCCAGCCC CTGTATAAGG TGGTACTGGA GGCCATGGCC 
CGGGACCCCC CAAACAGAGT TCCCCCCACC ACTGAGGGCA CCCGAGGGCT CCTCAGCTGC 
CTGCCAGATG TGGAAAGGGC CACGCTGACG CTTCTCCTGG ACCACCTGCG CCTCGTCTCC 
TCCTTCCATG CCTACAACCG CATGACCCCA CAGAACTTGG CCGTGTGCTT CGGGCCTGTG 
CTGCTGCCGG CACGCCAGGC GCCCACAAGG CCTCGTGCCC GCAGCTCCGG CCCAGGCCTT 
GCCAGTGCAG TGGACTTCAA GCACCACATC GAGGTGCTGC ACTACCTGCT GCAGTCTTGG 
CCAGATCCCC GCCTGCCCCG ACAATCTCCA GATGTCGCGC CTTACTTGCG ACCCAAACGA 
CAGCCACCTC TGCACCTGCC GCTGGCAGAC CCCGAAGTGG TGACTCGGCC CCGCGGTCGA 
GGAGGCCCCG AAAGCCCCCC GAGCAACCGC TACGCCGGCG ACTGGAGCGT TTGCGGGCGG 
GACTTCCTGC CCTGTGGGCG GGATTTCCTG TCCGGGCCAG ACTACGACCA CGTGACGGGC 
AGTGACAGCG AGGACGAGGA CGAGGAGGTC GGCGAGCCGA GGGTCACCGG TGACTTCGAA 
GACGACTTCG ATGCGCCCTT CAACCCGCAC CTGAATCTCA AAGACTTCGA CGCCCTCATC 
CTGGATCTGG AGAGAGAGCT CTCCAAGCAA ATCAACGTGT GCCTCTGA

The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.

RefSeq NP_149014.3
CDS34..2241
Translation

Target ORF information:

RefSeq Version NM_033025.6
Organism Homo sapiens(human)
Definition Homo sapiens synapse defective Rho GTPase homolog 1 (SYDE1), transcript variant 1, mRNA.

Target ORF information:

Epitope DYKDDDDK
Bacterial selection AMPR
Mammalian selection NeoR
Vector pcDNA3.1+/C-(K)DYK
 NM_033025.6

ORF Insert Sequence:

1
61
121
181
241
301
361
421
481
541
601
661
721
781
841
901
961
1021
1081
1141
1201
1261
1321
1381
1441
1501
1561
1621
1681
1741
1801
1861
1921
1981
2041
2101
2161
ATGGCCGAGC CGCTACTCAG GAAAACCTTC TCCCGCCTGC GGGGCCGGGA GAAACTTCCC 
CGGAAAAAGT CGGACGCCAA GGAGCGCGGC CACCCAGCCC AGCGCCCAGA GCCCAGCCCT 
CCAGAGCCAG AGCCCCAGGC TCCCGAAGGG TCCCAGGCCG GAGCAGAGGG GCCCTCCAGC 
CCCGAGGCAT CAAGGAGCCC TGCACGGGGA GCCTACCTGC AAAGCCTGGA GCCCAGTAGC 
CGCCGATGGG TGCTGGGTGG GGCCAAGCCA GCTGAGGACA CCTCTTTAGG GCCTGGGGTA 
CCTGGCACTG GGGAGCCCGC CGGCGAGATC TGGTACAACC CCATCCCTGA GGAAGACCCC 
AGACCTCCAG CACCTGAGCC CCCGGGGCCA CAGCCTGGCT CAGCTGAGTC AGAGGGCCTG 
GCCCCCCAAG GTGCAGCCCC CGCCAGCCCC CCAACCAAAG CCTCCCGCAC CAAGTCCCCG 
GGCCCCGCCA GGCGCCTCTC CATAAAGATG AAGAAGCTGC CGGAACTGCG GCGCCGCCTG 
AGCCTGCGAG GCCCCCGGGC TGGCAGGGAG CGCGAGAGGG CTGCCCCTGC GGGCTCCGTC 
ATCAGCCGCT ACCACCTGGA CAGCAGCGTG GGGGGCCCCG GGCCGGCAGC AGGGCCTGGG 
GGCACCCGGA GCCCGAGGGC CGGTTACCTC AGCGACGGGG ACTCACCGGA GCGCCCAGCT 
GGGCCCCCAT CACCCACCTC CTTCCGGCCC TACGAGGTGG GTCCCGCAGC CCGGGCACCC 
CCGGCCGCAC TCTGGGGCCG CCTCAGCCTG CACCTGTACG GTCTCGGGGG GCTGCGGCCA 
GCGCCGGGGG CCACCCCCAG GGACCTCTGC TGCCTACTGC AAGTGGATGG GGAGGCCAGG 
GCCCGAACAG GGCCACTGCG AGGGGGGCCG GACTTCCTGC GGCTGGACCA CACCTTCCAC 
CTGGAGCTGG AGGCCGCCAG GCTCCTGCGC GCCCTGGTGC TTGCGTGGGA CCCTGGCGTG 
AGAAGGCACC GGCCCTGTGC CCAGGGCACC GTGCTGCTGC CCACGGTCTT CCGAGGGTGC 
CAGGCCCAAC AGCTGGCCGT GCGCCTGGAG CCTCAGGGGC TGCTGTATGC CAAGCTGACC 
CTGTCGGAGC AGCAGGAAGC CCCTGCCACA GCTGAGCCCC GCGTCTTTGG GCTGCCCCTG 
CCACTGCTGG TGGAGCGGGA GCGGCCCCCC GGCCAGGTGC CCCTCATCAT CCAGAAGTGC 
GTTGGGCAGA TCGAGCGCCG AGGGCTGCGG GTAGTGGGAC TGTACCGTCT TTGTGGCTCA 
GCGGCAGTGA AGAAAGAGCT TCGGGATGCC TTTGAGCGGG ACAGTGCAGC GGTCTGCCTA 
TCTGAGGACC TGTACCCCGA TATCAATGTC ATCACTGGCA TCCTCAAGGA TTATCTTCGA 
GAGTTGCCCA CCCCACTCAT CACCCAGCCC CTGTATAAGG TGGTACTGGA GGCCATGGCC 
CGGGACCCCC CAAACAGAGT TCCCCCCACC ACTGAGGGCA CCCGAGGGCT CCTCAGCTGC 
CTGCCAGATG TGGAAAGGGC CACGCTGACG CTTCTCCTGG ACCACCTGCG CCTCGTCTCC 
TCCTTCCATG CCTACAACCG CATGACCCCA CAGAACTTGG CCGTGTGCTT CGGGCCTGTG 
CTGCTGCCGG CACGCCAGGC GCCCACAAGG CCTCGTGCCC GCAGCTCCGG CCCAGGCCTT 
GCCAGTGCAG TGGACTTCAA GCACCACATC GAGGTGCTGC ACTACCTGCT GCAGTCTTGG 
CCAGATCCCC GCCTGCCCCG ACAATCTCCA GATGTCGCGC CTTACTTGCG ACCCAAACGA 
CAGCCACCTC TGCACCTGCC GCTGGCAGAC CCCGAAGTGG TGACTCGGCC CCGCGGTCGA 
GGAGGCCCCG AAAGCCCCCC GAGCAACCGC TACGCCGGCG ACTGGAGCGT TTGCGGGCGG 
GACTTCCTGC CCTGTGGGCG GGATTTCCTG TCCGGGCCAG ACTACGACCA CGTGACGGGC 
AGTGACAGCG AGGACGAGGA CGAGGAGGTC GGCGAGCCGA GGGTCACCGG TGACTTCGAA 
GACGACTTCG ATGCGCCCTT CAACCCGCAC CTGAATCTCA AAGACTTCGA CGCCCTCATC 
CTGGATCTGG AGAGAGAGCT CTCCAAGCAA ATCAACGTGT GCCTCTGA

The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.

PubMed

book

Association of dysfunctional synapse defective 1 (SYDE1) with restricted fetal growth - SYDE1 regulates placental cell migration and invasion.
The Journal of pathology241(3)324-336(2017 Feb)
Lo HF,Tsai CY,Chen CP,Wang LJ,Lee YS,Chen CY,Liang CT,Cheong ML,Chen H


book

Functional relevance of a six mesenchymal gene signature in epithelial-mesenchymal transition (EMT) reversal by the triple angiokinase inhibitor, nintedanib (BIBF1120).
Oncotarget6(26)22098-113(2015 Sep)
Huang RY,Kuay KT,Tan TZ,Asad M,Tang HM,Ng AH,Ye J,Chung VY,Thiery JP


book

Analysis of the placental tissue transcriptome of normal and preeclampsia complicated pregnancies.
Acta naturae6(2)71-83(2014 Apr)
Trifonova EA,Gabidulina TV,Ershov NI,Serebrova VN,Vorozhishcheva AY,Stepanov VA


book

mSYD1A, a mammalian synapse-defective-1 protein, regulates synaptogenic signaling and vesicle docking.
Neuron78(6)1012-23(2013 Jun)
Wentzel C,Sommer JE,Nair R,Stiefvater A,Sibarita JB,Scheiffele P