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SAMD1 cDNA ORF clone, Homo sapiens(human)

Summary

Gene Symbol SAMD1
Entrez Gene ID 90378
Full Name sterile alpha motif domain containing 1
General protein information
Preferred Names

sterile alpha motif domain containing 1

Names

atherin
SAM domain containing 1
sterile alpha motif domain-containing protein 1
Gene Type protein-coding
Organism Homo sapiens(human)
Genome

19

19p13.12

Reference Sequences (RefSeq)

mRNA and Protein(s)

mRNA Protein Name
NM_138352.2 NP_612361.1 atherin
NM_138352.3 NP_612361.1 atherin

Pathways from BioSystems


Homologies


Rattus norvegicus (Norway rat) LOC102550189 XP_006255403.1
Homo sapiens (human) SAMD1 NP_612361.1
Pan troglodytes (chimpanzee) SAMD1 XP_003316203.1
Canis lupus familiaris (dog) SAMD1 XP_005633264.1
Mus musculus (house mouse) Samd1 NP_001074884.1

Gene Ontology


Bibliography

Related articles in PubMed

Quantitative Proteomics of the SMAD (Suppressor of Mothers against Decapentaplegic) Transcription Factor Family Identifies Importin 5 as a Bone Morphogenic Protein Receptor SMAD-specific Importin.
Baas R, Sijm A, van Teeffelen HA, van Es R, Vos HR, Marc Timmers HT
The Journal of biological chemistry291(46)24121-24132(2016 Nov)

Atherin: a newly identified, lesion-specific, LDL-binding protein in human atherosclerosis.
Lees AM, Deconinck AE, Campbell BD, Lees RS
Atherosclerosis182(2)219-30(2005 Oct)

GeneRIFs: Gene References Into Functions What's a GeneRIF?

The nuclear importin IPO5 was identified as a novel interacting protein of SMAD1. Overexpression of IPO5 in various cell lines specifically increases nuclear localization of BMP receptor-activated SMADs (R-SMADs) confirming a functional relationship between IPO5 and BMP but not TGF-beta R-SMADs.
Title: Quantitative Proteomics of the SMAD (Suppressor of Mothers against Decapentaplegic) Transcription Factor Family Identifies Importin 5 as a Bone Morphogenic Protein Receptor SMAD-specific Importin.

atherin is present only in atherosclerotic lesions, not in normal intima
Title: Atherin: a newly identified, lesion-specific, LDL-binding protein in human atherosclerosis.

The following SAMD1 gene cDNA ORF clone sequences were retrieved from the NCBI Reference Sequence Database (RefSeq). These sequences represent the protein coding region of the SAMD1 cDNA ORF which is encoded by the open reading frame (ORF) sequence. ORF sequences can be delivered in our standard vector, pcDNA3.1+/C-(K)DYK or the vector of your choice as an expression/transfection-ready ORF clone. Not the clone you want? Click here to find your clone.

***CloneID Accession No. Definition **Vector *Turnaround time Price (USD) Select
OHu100476 NM_138352.3
Latest version!		 Homo sapiens sterile alpha motif domain containing 1 (SAMD1), mRNA. pcDNA3.1+/C-(K)DYK or customized vector TBD $307.30
$439.00
View Old Accession Versions >>
OHu100476 NM_138352.2 Homo sapiens sterile alpha motif domain containing 1 (SAMD1), mRNA. pcDNA3.1+/C-(K)DYK or customized vector TBD $307.30
$439.00
Hide Old Accession Versions >>

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** You may select a custom vector to replace pcDNA3.1+/C-(K)DYK after clone is added to cart.

** GenScript guarantees 100% sequence accuracy of all synthetic DNA constructs we deliver, but we do not guarantee protein expression in your experimental system. Protein expression is influenced by many factors that may vary between experiments or laboratories. In addition, please pay attention to the signal peptide, propeptide and transit peptide in target ORF, which may affect the choice of vector (N/C terminal tag vector).

***One clone ID might be correlated to multiple accession numbers, which share the same CDS sequence.

Reference Sequences (Refseq)


CloneID OHu100476
Clone ID Related Accession (Same CDS sequence) NM_138352.2 , NM_138352.3
Accession Version NM_138352.2 Documents for ORF clone product in default vector
Sequence Information ORF Nucleotide Sequence (Length: 1617bp)
Protein sequence
SNP
Vector pcDNA3.1+/C-(K)DYK or customized vector User Manual
Clone information Clone Map MSDS
Tag on pcDNA3.1+/C-(K)DYK C terminal DYKDDDDK tags
ORF Insert Method CloneEZ™ Seamless cloning technology
Insert Structure linear
Update Date 2019-02-25
Organism Homo sapiens(human)
Product atherin
Comment Comment: VALIDATED REFSEQ: This record has undergone validation or preliminary review. The reference sequence was derived from AC022098.9, AY453840.1 and BC065477.1. On Sep 16, 2016 this sequence version replaced NM_138352.1. Sequence Note: This RefSeq record was created from transcript and genomic sequence data to make the sequence consistent with the reference genome assembly. The genomic coordinates used for the transcript record were based on transcript alignments. ##Evidence-Data-START## RNAseq introns :: mixed/partial sample support SAMEA1965299, SAMEA1966682 [ECO:0000350] ##Evidence-Data-END## COMPLETENESS: complete on the 3' end. 

1
61
121
181
241
301
361
421
481
541
601
661
721
781
841
901
961
1021
1081
1141
1201
1261
1321
1381
1441
1501
1561
ATGGCGGGGC CCCCGGCCCT ACCCCCGCCG GAGACGGCGG CGGCCGCCAC CACGGCGGCC 
GCCGCCTCGT CGTCCGCCGC TTCCCCGCAC TACCAAGAGT GGATCCTGGA CACCATCGAC 
TCGCTGCGCT CGCGCAAGGC GCGGCCGGAC CTGGAGCGCA TCTGCCGGAT GGTGCGGCGG 
CGGCACGGCC CGGAGCCGGA GCGCACGCGC GCCGAGCTCG AGAAACTGAT CCAGCAGCGC 
GCCGTGCTCC GGGTCAGCTA CAAGGGGAGC ATCTCGTACC GCAACGCGGC GCGCGTCCAG 
CCGCCCCGGC GCGGAGCCAC CCCGCCGGCC CCGCCGCGCG CCCCCCGCGG GGCCCCCGCC 
GCCGCCGCCG CCGCCGCGCC GCCGCCCACG CCCGCCCCGC CGCCACCGCC CGCGCCCGTC 
GCCGCCGCCG CCCCGGCCCG GGCGCCCCGC GCGGCCGCCG CCGCCGCCAC AGCGCCCCCC 
TCGCCTGGCC CCGCGCAGCC GGGCCCCCGC GCGCAGCGGG CCGCGCCCCT GGCCGCGCCG 
CCGCCCGCGC CAGCCGCTCC CCCGGCGGTG GCGCCCCCGG CCGGCCCGCG CCGCGCCCCC 
CCGCCCGCCG TCGCCGCCCG GGAGCCGCCG CTGCCGCCGC CGCCACAGCC GCCGGCGCCG 
CCACAGCAGC AGCAGCCGCC GCCGCCGCAG CCACAGCCGC CGCCGGAGGG GGGCGCGGTG 
CGGGCCGGCG GCGCGGCGCG GCCCGTGAGC CTGCGGGAAG TCGTGCGCTA CCTCGGGGGC 
AGCGGCGGCG CCGGCGGTCG CCTAACCCGC GGCCGCGTGC AGGGGCTGCT GGAGGAGGAG 
GCGGCGGCTC GAGGCCGTCT GGAGCGCACC CGTCTCGGAG CGCTTGCGCT GCCCCGCGGG 
GACAGGCCCG GACGGGCGCC GCCGGCCGCC AGCGCCCGCC CGTCTCGCAG CAAGAGAGGT 
GGAGAAGAGC GAGTACTTGA GAAAGAAGAG GAAGAAGATG ATGATGAAGA TGAAGATGAA 
GAAGATGATG TGTCAGAGGG CTCTGAAGTG CCCGAGAGTG ACCGTCCTGC AGGTGCCCAG 
CACCACCAGC TTAACGGCGA GCGGGGACCT CAGAGTGCCA AGGAGAGGGT CAAGGAGTGG 
ACCCCCTGCG GACCGCACCA GGGCCAGGAT GAAGGGCGGG GGCCAGCCCC GGGCAGCGGC 
ACCCGCCAGG TGTTCTCCAT GGCAGCCATG AACAAGGAAG GGGGAACAGC TTCTGTTGCC 
ACCGGGCCAG ACTCCCCGTC CCCCGTGCCT TTGCCCCCAG GCAAACCAGC CCTACCTGGG 
GCCGACGGGA CCCCCTTTGG CTGTCCTCCC GGGCGCAAAG AGAAGCCATC TGATCCCGTC 
GAGTGGACCG TGATGGATGT CGTCGAATAT TTTACTGAGG CTGGATTCCC GGAGCAGGCG 
ACAGCTTTCC AAGAGCAGGA AATTGATGGC AAATCTTTGC TGCTCATGCA GCGCACAGAT 
GTGCTCACCG GCCTGTCCAT CCGCCTCGGG CCAGCCCTGA AAATCTACGA GCACCACATC 
AAGGTGCTTC AGCAAGGCCA CTTTGAGGAT GATGACCCCG ATGGCTTCTT AGGCTGA

The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.

RefSeq NP_612361.1
CDS156..1772
Translation

Target ORF information:

RefSeq Version NM_138352.2
Organism Homo sapiens(human)
Definition Homo sapiens sterile alpha motif domain containing 1 (SAMD1), mRNA.

Target ORF information:

Epitope DYKDDDDK
Bacterial selection AMPR
Mammalian selection NeoR
Vector pcDNA3.1+/C-(K)DYK
 NM_138352.2

ORF Insert Sequence:

1
61
121
181
241
301
361
421
481
541
601
661
721
781
841
901
961
1021
1081
1141
1201
1261
1321
1381
1441
1501
1561
ATGGCGGGGC CCCCGGCCCT ACCCCCGCCG GAGACGGCGG CGGCCGCCAC CACGGCGGCC 
GCCGCCTCGT CGTCCGCCGC TTCCCCGCAC TACCAAGAGT GGATCCTGGA CACCATCGAC 
TCGCTGCGCT CGCGCAAGGC GCGGCCGGAC CTGGAGCGCA TCTGCCGGAT GGTGCGGCGG 
CGGCACGGCC CGGAGCCGGA GCGCACGCGC GCCGAGCTCG AGAAACTGAT CCAGCAGCGC 
GCCGTGCTCC GGGTCAGCTA CAAGGGGAGC ATCTCGTACC GCAACGCGGC GCGCGTCCAG 
CCGCCCCGGC GCGGAGCCAC CCCGCCGGCC CCGCCGCGCG CCCCCCGCGG GGCCCCCGCC 
GCCGCCGCCG CCGCCGCGCC GCCGCCCACG CCCGCCCCGC CGCCACCGCC CGCGCCCGTC 
GCCGCCGCCG CCCCGGCCCG GGCGCCCCGC GCGGCCGCCG CCGCCGCCAC AGCGCCCCCC 
TCGCCTGGCC CCGCGCAGCC GGGCCCCCGC GCGCAGCGGG CCGCGCCCCT GGCCGCGCCG 
CCGCCCGCGC CAGCCGCTCC CCCGGCGGTG GCGCCCCCGG CCGGCCCGCG CCGCGCCCCC 
CCGCCCGCCG TCGCCGCCCG GGAGCCGCCG CTGCCGCCGC CGCCACAGCC GCCGGCGCCG 
CCACAGCAGC AGCAGCCGCC GCCGCCGCAG CCACAGCCGC CGCCGGAGGG GGGCGCGGTG 
CGGGCCGGCG GCGCGGCGCG GCCCGTGAGC CTGCGGGAAG TCGTGCGCTA CCTCGGGGGC 
AGCGGCGGCG CCGGCGGTCG CCTAACCCGC GGCCGCGTGC AGGGGCTGCT GGAGGAGGAG 
GCGGCGGCTC GAGGCCGTCT GGAGCGCACC CGTCTCGGAG CGCTTGCGCT GCCCCGCGGG 
GACAGGCCCG GACGGGCGCC GCCGGCCGCC AGCGCCCGCC CGTCTCGCAG CAAGAGAGGT 
GGAGAAGAGC GAGTACTTGA GAAAGAAGAG GAAGAAGATG ATGATGAAGA TGAAGATGAA 
GAAGATGATG TGTCAGAGGG CTCTGAAGTG CCCGAGAGTG ACCGTCCTGC AGGTGCCCAG 
CACCACCAGC TTAACGGCGA GCGGGGACCT CAGAGTGCCA AGGAGAGGGT CAAGGAGTGG 
ACCCCCTGCG GACCGCACCA GGGCCAGGAT GAAGGGCGGG GGCCAGCCCC GGGCAGCGGC 
ACCCGCCAGG TGTTCTCCAT GGCAGCCATG AACAAGGAAG GGGGAACAGC TTCTGTTGCC 
ACCGGGCCAG ACTCCCCGTC CCCCGTGCCT TTGCCCCCAG GCAAACCAGC CCTACCTGGG 
GCCGACGGGA CCCCCTTTGG CTGTCCTCCC GGGCGCAAAG AGAAGCCATC TGATCCCGTC 
GAGTGGACCG TGATGGATGT CGTCGAATAT TTTACTGAGG CTGGATTCCC GGAGCAGGCG 
ACAGCTTTCC AAGAGCAGGA AATTGATGGC AAATCTTTGC TGCTCATGCA GCGCACAGAT 
GTGCTCACCG GCCTGTCCAT CCGCCTCGGG CCAGCCCTGA AAATCTACGA GCACCACATC 
AAGGTGCTTC AGCAAGGCCA CTTTGAGGAT GATGACCCCG ATGGCTTCTT AGGCTGA

The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.

CloneID OHu100476
Clone ID Related Accession (Same CDS sequence) NM_138352.2 , NM_138352.3
Accession Version NM_138352.3 Latest version! Documents for ORF clone product in default vector
Sequence Information ORF Nucleotide Sequence (Length: 1617bp)
Protein sequence
SNP
Vector pcDNA3.1+/C-(K)DYK or customized vector User Manual
Clone information Clone Map MSDS
Tag on pcDNA3.1+/C-(K)DYK C terminal DYKDDDDK tags
ORF Insert Method CloneEZ™ Seamless cloning technology
Insert Structure linear
Update Date 2019-08-07
Organism Homo sapiens(human)
Product atherin
Comment Comment: VALIDATED REFSEQ: This record has undergone validation or preliminary review. The reference sequence was derived from AC022098.9, AY453840.1 and BC065477.1. On May 17, 2019 this sequence version replaced NM_138352.2. Sequence Note: This RefSeq record was created from transcript and genomic sequence data to make the sequence consistent with the reference genome assembly. The genomic coordinates used for the transcript record were based on transcript alignments. ##Evidence-Data-START## Transcript exon combination :: AY453840.1 [ECO:0000332] RNAseq introns :: mixed/partial sample support SAMEA1965299, SAMEA1966682 [ECO:0000350] ##Evidence-Data-END## ##RefSeq-Attributes-START## RefSeq Select criteria :: based on single protein-coding transcript ##RefSeq-Attributes-END## COMPLETENESS: complete on the 3' end. 

1
61
121
181
241
301
361
421
481
541
601
661
721
781
841
901
961
1021
1081
1141
1201
1261
1321
1381
1441
1501
1561
ATGGCGGGGC CCCCGGCCCT ACCCCCGCCG GAGACGGCGG CGGCCGCCAC CACGGCGGCC 
GCCGCCTCGT CGTCCGCCGC TTCCCCGCAC TACCAAGAGT GGATCCTGGA CACCATCGAC 
TCGCTGCGCT CGCGCAAGGC GCGGCCGGAC CTGGAGCGCA TCTGCCGGAT GGTGCGGCGG 
CGGCACGGCC CGGAGCCGGA GCGCACGCGC GCCGAGCTCG AGAAACTGAT CCAGCAGCGC 
GCCGTGCTCC GGGTCAGCTA CAAGGGGAGC ATCTCGTACC GCAACGCGGC GCGCGTCCAG 
CCGCCCCGGC GCGGAGCCAC CCCGCCGGCC CCGCCGCGCG CCCCCCGCGG GGCCCCCGCC 
GCCGCCGCCG CCGCCGCGCC GCCGCCCACG CCCGCCCCGC CGCCACCGCC CGCGCCCGTC 
GCCGCCGCCG CCCCGGCCCG GGCGCCCCGC GCGGCCGCCG CCGCCGCCAC AGCGCCCCCC 
TCGCCTGGCC CCGCGCAGCC GGGCCCCCGC GCGCAGCGGG CCGCGCCCCT GGCCGCGCCG 
CCGCCCGCGC CAGCCGCTCC CCCGGCGGTG GCGCCCCCGG CCGGCCCGCG CCGCGCCCCC 
CCGCCCGCCG TCGCCGCCCG GGAGCCGCCG CTGCCGCCGC CGCCACAGCC GCCGGCGCCG 
CCACAGCAGC AGCAGCCGCC GCCGCCGCAG CCACAGCCGC CGCCGGAGGG GGGCGCGGTG 
CGGGCCGGCG GCGCGGCGCG GCCCGTGAGC CTGCGGGAAG TCGTGCGCTA CCTCGGGGGC 
AGCGGCGGCG CCGGCGGTCG CCTAACCCGC GGCCGCGTGC AGGGGCTGCT GGAGGAGGAG 
GCGGCGGCTC GAGGCCGTCT GGAGCGCACC CGTCTCGGAG CGCTTGCGCT GCCCCGCGGG 
GACAGGCCCG GACGGGCGCC GCCGGCCGCC AGCGCCCGCC CGTCTCGCAG CAAGAGAGGT 
GGAGAAGAGC GAGTACTTGA GAAAGAAGAG GAAGAAGATG ATGATGAAGA TGAAGATGAA 
GAAGATGATG TGTCAGAGGG CTCTGAAGTG CCCGAGAGTG ACCGTCCTGC AGGTGCCCAG 
CACCACCAGC TTAACGGCGA GCGGGGACCT CAGAGTGCCA AGGAGAGGGT CAAGGAGTGG 
ACCCCCTGCG GACCGCACCA GGGCCAGGAT GAAGGGCGGG GGCCAGCCCC GGGCAGCGGC 
ACCCGCCAGG TGTTCTCCAT GGCAGCCATG AACAAGGAAG GGGGAACAGC TTCTGTTGCC 
ACCGGGCCAG ACTCCCCGTC CCCCGTGCCT TTGCCCCCAG GCAAACCAGC CCTACCTGGG 
GCCGACGGGA CCCCCTTTGG CTGTCCTCCC GGGCGCAAAG AGAAGCCATC TGATCCCGTC 
GAGTGGACCG TGATGGATGT CGTCGAATAT TTTACTGAGG CTGGATTCCC GGAGCAGGCG 
ACAGCTTTCC AAGAGCAGGA AATTGATGGC AAATCTTTGC TGCTCATGCA GCGCACAGAT 
GTGCTCACCG GCCTGTCCAT CCGCCTCGGG CCAGCCCTGA AAATCTACGA GCACCACATC 
AAGGTGCTTC AGCAAGGCCA CTTTGAGGAT GATGACCCCG ATGGCTTCTT AGGCTGA

The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.

RefSeq NP_612361.1
CDS332..1948
Translation

Target ORF information:

RefSeq Version NM_138352.3
Organism Homo sapiens(human)
Definition Homo sapiens sterile alpha motif domain containing 1 (SAMD1), mRNA.

Target ORF information:

Epitope DYKDDDDK
Bacterial selection AMPR
Mammalian selection NeoR
Vector pcDNA3.1+/C-(K)DYK
 NM_138352.3

ORF Insert Sequence:

1
61
121
181
241
301
361
421
481
541
601
661
721
781
841
901
961
1021
1081
1141
1201
1261
1321
1381
1441
1501
1561
ATGGCGGGGC CCCCGGCCCT ACCCCCGCCG GAGACGGCGG CGGCCGCCAC CACGGCGGCC 
GCCGCCTCGT CGTCCGCCGC TTCCCCGCAC TACCAAGAGT GGATCCTGGA CACCATCGAC 
TCGCTGCGCT CGCGCAAGGC GCGGCCGGAC CTGGAGCGCA TCTGCCGGAT GGTGCGGCGG 
CGGCACGGCC CGGAGCCGGA GCGCACGCGC GCCGAGCTCG AGAAACTGAT CCAGCAGCGC 
GCCGTGCTCC GGGTCAGCTA CAAGGGGAGC ATCTCGTACC GCAACGCGGC GCGCGTCCAG 
CCGCCCCGGC GCGGAGCCAC CCCGCCGGCC CCGCCGCGCG CCCCCCGCGG GGCCCCCGCC 
GCCGCCGCCG CCGCCGCGCC GCCGCCCACG CCCGCCCCGC CGCCACCGCC CGCGCCCGTC 
GCCGCCGCCG CCCCGGCCCG GGCGCCCCGC GCGGCCGCCG CCGCCGCCAC AGCGCCCCCC 
TCGCCTGGCC CCGCGCAGCC GGGCCCCCGC GCGCAGCGGG CCGCGCCCCT GGCCGCGCCG 
CCGCCCGCGC CAGCCGCTCC CCCGGCGGTG GCGCCCCCGG CCGGCCCGCG CCGCGCCCCC 
CCGCCCGCCG TCGCCGCCCG GGAGCCGCCG CTGCCGCCGC CGCCACAGCC GCCGGCGCCG 
CCACAGCAGC AGCAGCCGCC GCCGCCGCAG CCACAGCCGC CGCCGGAGGG GGGCGCGGTG 
CGGGCCGGCG GCGCGGCGCG GCCCGTGAGC CTGCGGGAAG TCGTGCGCTA CCTCGGGGGC 
AGCGGCGGCG CCGGCGGTCG CCTAACCCGC GGCCGCGTGC AGGGGCTGCT GGAGGAGGAG 
GCGGCGGCTC GAGGCCGTCT GGAGCGCACC CGTCTCGGAG CGCTTGCGCT GCCCCGCGGG 
GACAGGCCCG GACGGGCGCC GCCGGCCGCC AGCGCCCGCC CGTCTCGCAG CAAGAGAGGT 
GGAGAAGAGC GAGTACTTGA GAAAGAAGAG GAAGAAGATG ATGATGAAGA TGAAGATGAA 
GAAGATGATG TGTCAGAGGG CTCTGAAGTG CCCGAGAGTG ACCGTCCTGC AGGTGCCCAG 
CACCACCAGC TTAACGGCGA GCGGGGACCT CAGAGTGCCA AGGAGAGGGT CAAGGAGTGG 
ACCCCCTGCG GACCGCACCA GGGCCAGGAT GAAGGGCGGG GGCCAGCCCC GGGCAGCGGC 
ACCCGCCAGG TGTTCTCCAT GGCAGCCATG AACAAGGAAG GGGGAACAGC TTCTGTTGCC 
ACCGGGCCAG ACTCCCCGTC CCCCGTGCCT TTGCCCCCAG GCAAACCAGC CCTACCTGGG 
GCCGACGGGA CCCCCTTTGG CTGTCCTCCC GGGCGCAAAG AGAAGCCATC TGATCCCGTC 
GAGTGGACCG TGATGGATGT CGTCGAATAT TTTACTGAGG CTGGATTCCC GGAGCAGGCG 
ACAGCTTTCC AAGAGCAGGA AATTGATGGC AAATCTTTGC TGCTCATGCA GCGCACAGAT 
GTGCTCACCG GCCTGTCCAT CCGCCTCGGG CCAGCCCTGA AAATCTACGA GCACCACATC 
AAGGTGCTTC AGCAAGGCCA CTTTGAGGAT GATGACCCCG ATGGCTTCTT AGGCTGA

The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.

PubMed

book

Quantitative Proteomics of the SMAD (Suppressor of Mothers against Decapentaplegic) Transcription Factor Family Identifies Importin 5 as a Bone Morphogenic Protein Receptor SMAD-specific Importin.
The Journal of biological chemistry291(46)24121-24132(2016 Nov)
Baas R,Sijm A,van Teeffelen HA,van Es R,Vos HR,Marc Timmers HT


book

Atherin: a newly identified, lesion-specific, LDL-binding protein in human atherosclerosis.
Atherosclerosis182(2)219-30(2005 Oct)
Lees AM,Deconinck AE,Campbell BD,Lees RS