Gene Symbol | SAMD1 |
Entrez Gene ID | 90378 |
Full Name | sterile alpha motif domain containing 1 |
General protein information |
|
Gene Type | protein-coding |
Organism | Homo sapiens(human) |
Genome |
ORF » Species Summary » Homo sapiens » SAMD1 cDNA ORF clone
Gene Symbol | SAMD1 |
Entrez Gene ID | 90378 |
Full Name | sterile alpha motif domain containing 1 |
General protein information |
|
Gene Type | protein-coding |
Organism | Homo sapiens(human) |
Genome |
mRNA | Protein | Name |
---|---|---|
NM_138352.2 | NP_612361.1 | atherin |
NM_138352.3 | NP_612361.1 | atherin |
Rattus norvegicus (Norway rat) | LOC102550189 | XP_006255403.1 |
Homo sapiens (human) | SAMD1 | NP_612361.1 |
Pan troglodytes (chimpanzee) | SAMD1 | XP_003316203.1 |
Canis lupus familiaris (dog) | SAMD1 | XP_005633264.1 |
Mus musculus (house mouse) | Samd1 | NP_001074884.1 |
Quantitative Proteomics of the SMAD (Suppressor of Mothers against Decapentaplegic) Transcription Factor Family Identifies Importin 5 as a Bone Morphogenic Protein Receptor SMAD-specific Importin.
Baas R, Sijm A, van Teeffelen HA, van Es R, Vos HR, Marc Timmers HT
The Journal of biological chemistry291(46)24121-24132(2016 Nov)
Atherin: a newly identified, lesion-specific, LDL-binding protein in human atherosclerosis.
Lees AM, Deconinck AE, Campbell BD, Lees RS
Atherosclerosis182(2)219-30(2005 Oct)
GeneRIFs: Gene References Into Functions What's a GeneRIF?
The nuclear importin IPO5 was identified as a novel interacting protein of SMAD1. Overexpression of IPO5 in various cell lines specifically increases nuclear localization of BMP receptor-activated SMADs (R-SMADs) confirming a functional relationship between IPO5 and BMP but not TGF-beta R-SMADs.
Title: Quantitative Proteomics of the SMAD (Suppressor of Mothers against Decapentaplegic) Transcription Factor Family Identifies Importin 5 as a Bone Morphogenic Protein Receptor SMAD-specific Importin.
atherin is present only in atherosclerotic lesions, not in normal intima
Title: Atherin: a newly identified, lesion-specific, LDL-binding protein in human atherosclerosis.
The following SAMD1 gene cDNA ORF clone sequences were retrieved from the NCBI Reference Sequence Database (RefSeq). These sequences represent the protein coding region of the SAMD1 cDNA ORF which is encoded by the open reading frame (ORF) sequence. ORF sequences can be delivered in our standard vector, pcDNA3.1+/C-(K)DYK or the vector of your choice as an expression/transfection-ready ORF clone. Not the clone you want? Click here to find your clone.
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CloneID | OHu100476 | |
Clone ID Related Accession (Same CDS sequence) | NM_138352.2 , NM_138352.3 | |
Accession Version | NM_138352.2 | Documents for ORF clone product in default vector |
Sequence Information | ORF Nucleotide Sequence (Length: 1617bp) Protein sequence SNP |
|
Vector | pcDNA3.1-C-(k)DYK or customized vector | User Manual |
Clone information | Clone Map | MSDS |
Tag on pcDNA3.1+/C-(K)DYK | C terminal DYKDDDDK tags | |
ORF Insert Method | CloneEZ™ Seamless cloning technology | |
Insert Structure | linear | |
Update Date | 2019-02-25 | |
Organism | Homo sapiens(human) | |
Product | atherin | |
Comment | Comment: VALIDATED REFSEQ: This record has undergone validation or preliminary review. The reference sequence was derived from AC022098.9, AY453840.1 and BC065477.1. On Sep 16, 2016 this sequence version replaced NM_138352.1. Sequence Note: This RefSeq record was created from transcript and genomic sequence data to make the sequence consistent with the reference genome assembly. The genomic coordinates used for the transcript record were based on transcript alignments. ##Evidence-Data-START## RNAseq introns :: mixed/partial sample support SAMEA1965299, SAMEA1966682 [ECO:0000350] ##Evidence-Data-END## COMPLETENESS: complete on the 3' end. |
1 | ATGGCGGGGC CCCCGGCCCT ACCCCCGCCG GAGACGGCGG CGGCCGCCAC CACGGCGGCC |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
RefSeq | NP_612361.1 |
CDS | 156..1772 |
Translation |
Target ORF information:
Target ORF information:
|
NM_138352.2 |
1 | ATGGCGGGGC CCCCGGCCCT ACCCCCGCCG GAGACGGCGG CGGCCGCCAC CACGGCGGCC |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
CloneID | OHu100476 | |
Clone ID Related Accession (Same CDS sequence) | NM_138352.2 , NM_138352.3 | |
Accession Version | NM_138352.3 Latest version! | Documents for ORF clone product in default vector |
Sequence Information | ORF Nucleotide Sequence (Length: 1617bp) Protein sequence SNP |
|
Vector | pcDNA3.1-C-(k)DYK or customized vector | User Manual |
Clone information | Clone Map | MSDS |
Tag on pcDNA3.1+/C-(K)DYK | C terminal DYKDDDDK tags | |
ORF Insert Method | CloneEZ™ Seamless cloning technology | |
Insert Structure | linear | |
Update Date | 2019-08-07 | |
Organism | Homo sapiens(human) | |
Product | atherin | |
Comment | Comment: VALIDATED REFSEQ: This record has undergone validation or preliminary review. The reference sequence was derived from AC022098.9, AY453840.1 and BC065477.1. On May 17, 2019 this sequence version replaced NM_138352.2. Sequence Note: This RefSeq record was created from transcript and genomic sequence data to make the sequence consistent with the reference genome assembly. The genomic coordinates used for the transcript record were based on transcript alignments. ##Evidence-Data-START## Transcript exon combination :: AY453840.1 [ECO:0000332] RNAseq introns :: mixed/partial sample support SAMEA1965299, SAMEA1966682 [ECO:0000350] ##Evidence-Data-END## ##RefSeq-Attributes-START## RefSeq Select criteria :: based on single protein-coding transcript ##RefSeq-Attributes-END## COMPLETENESS: complete on the 3' end. |
1 | ATGGCGGGGC CCCCGGCCCT ACCCCCGCCG GAGACGGCGG CGGCCGCCAC CACGGCGGCC |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
RefSeq | NP_612361.1 |
CDS | 332..1948 |
Translation |
Target ORF information:
Target ORF information:
|
NM_138352.3 |
1 | ATGGCGGGGC CCCCGGCCCT ACCCCCGCCG GAGACGGCGG CGGCCGCCAC CACGGCGGCC |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
Quantitative Proteomics of the SMAD (Suppressor of Mothers against Decapentaplegic) Transcription Factor Family Identifies Importin 5 as a Bone Morphogenic Protein Receptor SMAD-specific Importin. |
Atherin: a newly identified, lesion-specific, LDL-binding protein in human atherosclerosis. |