Gene Symbol | Ly6c2 |
Entrez Gene ID | 100041546 |
Full Name | lymphocyte antigen 6 complex, locus C2 |
Synonyms | Ly-6C.2,Ly-6C2 |
General protein information |
|
Gene Type | protein-coding |
Organism | Mus musculus(house mouse) |
Genome |
ORF » Species Summary » Mus musculus » Ly6c2 cDNA ORF clone
gRNAs
Gene Symbol | Ly6c2 |
Entrez Gene ID | 100041546 |
Full Name | lymphocyte antigen 6 complex, locus C2 |
Synonyms | Ly-6C.2,Ly-6C2 |
General protein information |
|
Gene Type | protein-coding |
Organism | Mus musculus(house mouse) |
Genome |
mRNA | Protein | Name |
---|---|---|
XM_011245390.3 | XP_011243692.1 | lymphocyte antigen 6C2 isoform X1 |
XM_011245390.2 | XP_011243692.1 | lymphocyte antigen 6C2 isoform X1 |
XM_011245391.2 | XP_011243693.1 | lymphocyte antigen 6C2 isoform X1 |
XM_030248254.1 | XP_030104114.1 | lymphocyte antigen 6C2 isoform X1 |
NM_001099217.2 | NP_001092687.1 | lymphocyte antigen 6C2 precursor |
NM_001099217.1 | NP_001092687.1 | lymphocyte antigen 6C2 precursor |
NM_001357693.1 | NP_001344622.1 | lymphocyte antigen 6C2 precursor |
Mus musculus (house mouse) | Ly6i | NP_065244.2 |
Mus musculus (house mouse) | Ly6c2 | NP_001092687.1 |
Rattus norvegicus (Norway rat) | LOC300024 | XP_216959.1 |
Rattus norvegicus (Norway rat) | Ly6c | NP_064488.1 |
Rattus norvegicus (Norway rat) | Ly6i | NP_640350.1 |
Mus musculus (house mouse) | Ly6c1 | NP_001238984.1 |
Mus musculus (house mouse) | Ly6a | NP_034868.1 |
Mus musculus (house mouse) | Ly6f | NP_032556.1 |
Rattus norvegicus (Norway rat) | Ly6al | NP_001121571.1 |
Rattus norvegicus (Norway rat) | RGD1565410 | XP_006241832.1 |
Mus musculus (house mouse) | Ly6g | XP_006521677.1 |
Mus musculus (house mouse) | I830127L07Rik | XP_001477152.1 |
Rattus norvegicus (Norway rat) | LOC100911104 | XP_003751391.1 |
Organization, evolution and functions of the human and mouse Ly6/uPAR family genes.
Loughner CL, Bruford EA, McAndrews MS, Delp EE, Swamynathan S, Swamynathan SK
Human genomics1010(2016 Apr)
Differential Ly-6C expression identifies the recruited macrophage phenotype, which orchestrates the regression of murine liver fibrosis.
Ramachandran P, Pellicoro A, Vernon MA, Boulter L, Aucott RL, Ali A, Hartland SN, Snowdon VK, Cappon A, Gordon-Walker TT, Williams MJ, Dunbar DR, Manning JR, van Rooijen N, Fallowfield JA, Forbes SJ, Iredale JP
Proceedings of the National Academy of Sciences of the United States of America109(46)E3186-95(2012 Nov)
Polymorphisms in Ly6 genes in Msq1 encoding susceptibility to mouse adenovirus type 1.
Stier MT, Spindler KR
Mammalian genome : official journal of the International Mammalian Genome Society23(3-4)250-8(2012 Apr)
Multiple expression of Ly-6C and accumulation of a Ly-6C pre-mRNA in activated macrophages involved in rejection of an allografted tumor.
Takikawa O, Oku T, Ito N, Ushio Y, Yamamoto N, Yoneda Y, Tsuji J, Sanchez-Bueno A, Verkhusha V, Yoshida R
Biochemical and biophysical research communications226(1)247-53(1996 Sep)
N-terminal and cDNA characterization of murine lymphocyte antigen Ly-6C.2.
Palfree RG, Sirlin S, Dumont FJ, H?mmerling U
Journal of immunology (Baltimore, Md. : 1950)140(1)305-10(1988 Jan)
GeneRIFs: Gene References Into Functions What's a GeneRIF?
The following Ly6c2 gene cDNA ORF clone sequences were retrieved from the NCBI Reference Sequence Database (RefSeq). These sequences represent the protein coding region of the Ly6c2 cDNA ORF which is encoded by the open reading frame (ORF) sequence. ORF sequences can be delivered in our standard vector, pcDNA3.1+/C-(K)DYK or the vector of your choice as an expression/transfection-ready ORF clone. Not the clone you want? Click here to find your clone.
CloneID | OMu03245 | |
Clone ID Related Accession (Same CDS sequence) | XM_011245390.3 , XM_011245390.2 , XM_011245391.2 , XM_030248254.1 , NM_001099217.2 , NM_001099217.1 , NM_001357693.1 | |
Accession Version | NM_001099217.2 Latest version! | Documents for ORF clone product in default vector |
Sequence Information | ORF Nucleotide Sequence (Length: 396bp) Protein sequence SNP |
|
Vector | pcDNA3.1-C-(k)DYK or customized vector | ![]() |
Clone information | Clone Map | ![]() |
Tag on pcDNA3.1+/C-(K)DYK | C terminal DYKDDDDK tags | |
ORF Insert Method | CloneEZ™ Seamless cloning technology | |
Insert Structure | linear | |
Update Date | 2018-07-01 | |
Organism | Mus musculus(house mouse) | |
Product | lymphocyte antigen 6C2 precursor | |
Comment | Comment: VALIDATED REFSEQ: This record has undergone validation or preliminary review. The reference sequence was derived from AC116498.15. On Nov 4, 2017 this sequence version replaced NM_001099217.1. Sequence Note: The RefSeq transcript and protein were derived from genomic sequence to make the sequence consistent with the reference genome assembly. The genomic coordinates used for the transcript record were based on alignments. ##Evidence-Data-START## Transcript exon combination :: BC092082.1, AI663213.1 [ECO:0000332] RNAseq introns :: single sample supports all introns SAMN00849375, SAMN00849380 [ECO:0000348] ##Evidence-Data-END## |
1 | ATGGACAGTA CTCACGCTAC AAAGTCCTGT TTGCTGATTC TTCTTGTGGC CCTACTGTGT |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
RefSeq | NP_001092687.1 |
CDS | 46..441 |
Translation |
Target ORF information:
Target ORF information:
|
![]() |
1 | ATGGACAGTA CTCACGCTAC AAAGTCCTGT TTGCTGATTC TTCTTGTGGC CCTACTGTGT |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
CloneID | OMu03245 | |
Clone ID Related Accession (Same CDS sequence) | XM_011245390.3 , XM_011245390.2 , XM_011245391.2 , XM_030248254.1 , NM_001099217.2 , NM_001099217.1 , NM_001357693.1 | |
Accession Version | NM_001099217.1 | Documents for ORF clone product in default vector |
Sequence Information | ORF Nucleotide Sequence (Length: 396bp) Protein sequence SNP |
|
Vector | pcDNA3.1-C-(k)DYK or customized vector | ![]() |
Clone information | Clone Map | ![]() |
Tag on pcDNA3.1+/C-(K)DYK | C terminal DYKDDDDK tags | |
ORF Insert Method | CloneEZ™ Seamless cloning technology | |
Insert Structure | linear | |
Update Date | 2017-04-29 | |
Organism | Mus musculus(House mouse) | |
Product | lymphocyte antigen 6C2 precursor | |
Comment | VALIDATED REFSEQ: This record has undergone validation or preliminary review. The reference sequence was derived from BC092082.1. On or before Apr 11, 2009 this sequence version replaced XM_001477071.1, XM_001477088.1. ##Evidence-Data-START## Transcript exon combination :: BC092082.1, AI663213.1 [ECO:0000332] RNAseq introns :: single sample supports all introns SAMN00849375, SAMN00849380 [ECO:0000348] ##Evidence-Data-END## |
1 | ATGGACAGTA CTCACGCTAC AAAGTCCTGT TTGCTGATTC TTCTTGTGGC CCTACTGTGT |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
RefSeq | NP_001092687.1 |
CDS | 24..419 |
Translation |
Target ORF information:
Target ORF information:
|
![]() |
1 | ATGGACAGTA CTCACGCTAC AAAGTCCTGT TTGCTGATTC TTCTTGTGGC CCTACTGTGT |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
CloneID | OMu03245 | |
Clone ID Related Accession (Same CDS sequence) | XM_011245390.3 , XM_011245390.2 , XM_011245391.2 , XM_030248254.1 , NM_001099217.2 , NM_001099217.1 , NM_001357693.1 | |
Accession Version | NM_001357693.1 Latest version! | Documents for ORF clone product in default vector |
Sequence Information | ORF Nucleotide Sequence (Length: 396bp) Protein sequence SNP |
|
Vector | pcDNA3.1-C-(k)DYK or customized vector | ![]() |
Clone information | Clone Map | ![]() |
Tag on pcDNA3.1+/C-(K)DYK | C terminal DYKDDDDK tags | |
ORF Insert Method | CloneEZ™ Seamless cloning technology | |
Insert Structure | linear | |
Update Date | 2019-10-19 | |
Organism | Mus musculus(house mouse) | |
Product | lymphocyte antigen 6C2 precursor | |
Comment | Comment: VALIDATED REFSEQ: This record has undergone validation or preliminary review. The reference sequence was derived from AC116498.15. On Nov 4, 2017 this sequence version replaced XM_011245391.2. Sequence Note: The RefSeq transcript and protein were derived from genomic sequence to make the sequence consistent with the reference genome assembly. The genomic coordinates used for the transcript record were based on alignments. ##Evidence-Data-START## Transcript exon combination :: AA896214.1, AA673457.1 [ECO:0000332] RNAseq introns :: single sample supports all introns SAMN00849375, SAMN00849380 [ECO:0000348] ##Evidence-Data-END## |
1 | ATGGACAGTA CTCACGCTAC AAAGTCCTGT TTGCTGATTC TTCTTGTGGC CCTACTGTGT |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
RefSeq | NP_001344622.1 |
CDS | 43..438 |
Translation |
Target ORF information:
Target ORF information:
|
![]() |
1 | ATGGACAGTA CTCACGCTAC AAAGTCCTGT TTGCTGATTC TTCTTGTGGC CCTACTGTGT |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
CloneID | OMu03245 | |
Clone ID Related Accession (Same CDS sequence) | XM_011245390.3 , XM_011245390.2 , XM_011245391.2 , XM_030248254.1 , NM_001099217.2 , NM_001099217.1 , NM_001357693.1 | |
Accession Version | XM_011245390.2 | Documents for ORF clone product in default vector |
Sequence Information | ORF Nucleotide Sequence (Length: 396bp) Protein sequence SNP |
|
Vector | pcDNA3.1-C-(k)DYK or customized vector | ![]() |
Clone information | Clone Map | ![]() |
Tag on pcDNA3.1+/C-(K)DYK | C terminal DYKDDDDK tags | |
ORF Insert Method | CloneEZ™ Seamless cloning technology | |
Insert Structure | linear | |
Update Date | 2016-06-21 | |
Organism | Mus musculus(house mouse) | |
Product | lymphocyte antigen 6C2 isoform X1 | |
Comment | Comment: MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NC_000081.6) annotated using gene prediction method: Gnomon, supported by mRNA and EST evidence. Also see: Documentation of NCBI's Annotation Process On Jun 22, 2016 this sequence version replaced XM_011245390.1. ##Genome-Annotation-Data-START## Annotation Provider :: NCBI Annotation Status :: Full annotation Annotation Version :: Mus musculus Annotation Release 106 Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline Annotation Software Version :: 7.1 Annotation Method :: Best-placed RefSeq; Gnomon Features Annotated :: Gene; mRNA; CDS; ncRNA ##Genome-Annotation-Data-END## |
1 | ATGGACAGTA CTCACGCTAC AAAGTCCTGT TTGCTGATTC TTCTTGTGGC CCTACTGTGT |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
RefSeq | XP_011243692.1 |
CDS | 126..521 |
Translation |
Target ORF information:
Target ORF information:
|
![]() |
1 | ATGGACAGTA CTCACGCTAC AAAGTCCTGT TTGCTGATTC TTCTTGTGGC CCTACTGTGT |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
CloneID | OMu03245 | |
Clone ID Related Accession (Same CDS sequence) | XM_011245390.3 , XM_011245390.2 , XM_011245391.2 , XM_030248254.1 , NM_001099217.2 , NM_001099217.1 , NM_001357693.1 | |
Accession Version | XM_011245391.2 Latest version! | Documents for ORF clone product in default vector |
Sequence Information | ORF Nucleotide Sequence (Length: 396bp) Protein sequence SNP |
|
Vector | pcDNA3.1-C-(k)DYK or customized vector | ![]() |
Clone information | Clone Map | ![]() |
Tag on pcDNA3.1+/C-(K)DYK | C terminal DYKDDDDK tags | |
ORF Insert Method | CloneEZ™ Seamless cloning technology | |
Insert Structure | linear | |
Update Date | 2016-06-21 | |
Organism | Mus musculus(House mouse) | |
Product | lymphocyte antigen 6C2 isoform X1 | |
Comment | MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NC_000081.6) annotated using gene prediction method: Gnomon, supported by mRNA and EST evidence. Also see: Documentation of NCBI's Annotation Process On Jun 22, 2016 this sequence version replaced XM_011245391.1. ##Genome-Annotation-Data-START## Annotation Provider :: NCBI Annotation Status :: Full annotation Annotation Version :: Mus musculus Annotation Release 106 Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline Annotation Software Version :: 7.1 Annotation Method :: Best-placed RefSeq; Gnomon Features Annotated :: Gene; mRNA; CDS; ncRNA ##Genome-Annotation-Data-END## |
1 | ATGGACAGTA CTCACGCTAC AAAGTCCTGT TTGCTGATTC TTCTTGTGGC CCTACTGTGT |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
RefSeq | XP_011243693.1 |
CDS | 103..498 |
Translation |
Target ORF information:
Target ORF information:
|
![]() |
1 | ATGGACAGTA CTCACGCTAC AAAGTCCTGT TTGCTGATTC TTCTTGTGGC CCTACTGTGT |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
CloneID | OMu03245 | |
Clone ID Related Accession (Same CDS sequence) | XM_011245390.3 , XM_011245390.2 , XM_011245391.2 , XM_030248254.1 , NM_001099217.2 , NM_001099217.1 , NM_001357693.1 | |
Accession Version | XM_011245390.3 Latest version! | Documents for ORF clone product in default vector |
Sequence Information | ORF Nucleotide Sequence (Length: 396bp) Protein sequence SNP |
|
Vector | pcDNA3.1-C-(k)DYK or customized vector | ![]() |
Clone information | Clone Map | ![]() |
Tag on pcDNA3.1+/C-(K)DYK | C terminal DYKDDDDK tags | |
ORF Insert Method | CloneEZ™ Seamless cloning technology | |
Insert Structure | linear | |
Update Date | 2019-08-07 | |
Organism | Mus musculus(house mouse) | |
Product | lymphocyte antigen 6C2 isoform X1 | |
Comment | Comment: MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NC_000081.6) annotated using gene prediction method: Gnomon, supported by mRNA evidence. Also see: Documentation of NCBI's Annotation Process On Aug 8, 2019 this sequence version replaced XM_011245390.2. ##Genome-Annotation-Data-START## Annotation Provider :: NCBI Annotation Status :: Full annotation Annotation Name :: Mus musculus Annotation Release 108 Annotation Version :: 108 Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline Annotation Software Version :: 8.2 Annotation Method :: Best-placed RefSeq; Gnomon Features Annotated :: Gene; mRNA; CDS; ncRNA ##Genome-Annotation-Data-END## |
1 | ATGGACAGTA CTCACGCTAC AAAGTCCTGT TTGCTGATTC TTCTTGTGGC CCTACTGTGT |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
RefSeq | XP_011243692.1 |
CDS | 156..551 |
Translation |
Target ORF information:
Target ORF information:
|
![]() |
1 | ATGGACAGTA CTCACGCTAC AAAGTCCTGT TTGCTGATTC TTCTTGTGGC CCTACTGTGT |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
CloneID | OMu03245 | |
Clone ID Related Accession (Same CDS sequence) | XM_011245390.3 , XM_011245390.2 , XM_011245391.2 , XM_030248254.1 , NM_001099217.2 , NM_001099217.1 , NM_001357693.1 | |
Accession Version | XM_030248254.1 Latest version! | Documents for ORF clone product in default vector |
Sequence Information | ORF Nucleotide Sequence (Length: 396bp) Protein sequence SNP |
|
Vector | pcDNA3.1-C-(k)DYK or customized vector | ![]() |
Clone information | Clone Map | ![]() |
Tag on pcDNA3.1+/C-(K)DYK | C terminal DYKDDDDK tags | |
ORF Insert Method | CloneEZ™ Seamless cloning technology | |
Insert Structure | linear | |
Update Date | 2019-08-07 | |
Organism | Mus musculus(house mouse) | |
Product | lymphocyte antigen 6C2 isoform X1 | |
Comment | Comment: MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NC_000081.6) annotated using gene prediction method: Gnomon, supported by mRNA evidence. Also see: Documentation of NCBI's Annotation Process ##Genome-Annotation-Data-START## Annotation Provider :: NCBI Annotation Status :: Full annotation Annotation Name :: Mus musculus Annotation Release 108 Annotation Version :: 108 Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline Annotation Software Version :: 8.2 Annotation Method :: Best-placed RefSeq; Gnomon Features Annotated :: Gene; mRNA; CDS; ncRNA ##Genome-Annotation-Data-END## |
1 | ATGGACAGTA CTCACGCTAC AAAGTCCTGT TTGCTGATTC TTCTTGTGGC CCTACTGTGT |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
RefSeq | XP_030104114.1 |
CDS | 117..512 |
Translation |
Target ORF information:
Target ORF information:
|
![]() |
1 | ATGGACAGTA CTCACGCTAC AAAGTCCTGT TTGCTGATTC TTCTTGTGGC CCTACTGTGT |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
Organization, evolution and functions of the human and mouse Ly6/uPAR family genes. |
Differential Ly-6C expression identifies the recruited macrophage phenotype, which orchestrates the regression of murine liver fibrosis. |
Polymorphisms in Ly6 genes in Msq1 encoding susceptibility to mouse adenovirus type 1. |
Multiple expression of Ly-6C and accumulation of a Ly-6C pre-mRNA in activated macrophages involved in rejection of an allografted tumor. |
N-terminal and cDNA characterization of murine lymphocyte antigen Ly-6C.2. |