Gene Symbol | ZKSCAN16 |
Entrez Gene ID | 100041581 |
Full Name | zinc finger with KRAB and SCAN domains 16 |
Synonyms | XM_143800,Zfp483 |
General protein information |
|
Gene Type | protein-coding |
Organism | Mus musculus(House mouse) |
Genome |
ORF » Species Summary » Mus musculus » ZKSCAN16 cDNA ORF clone
Gene Symbol | ZKSCAN16 |
Entrez Gene ID | 100041581 |
Full Name | zinc finger with KRAB and SCAN domains 16 |
Synonyms | XM_143800,Zfp483 |
General protein information |
|
Gene Type | protein-coding |
Organism | Mus musculus(House mouse) |
Genome |
mRNA | Protein | Name |
---|---|---|
XM_006537508.2 | XP_006537571.1 | zinc finger protein 483 isoform X1 |
NM_001355408.1 | NP_001342337.1 | zinc finger protein 483 |
NM_001099323.2 | NP_001092793.1 | zinc finger protein 483 |
NM_001099323.3 | NP_001092793.1 | zinc finger protein 483 |
XM_011249892.1 | XP_011248194.1 | zinc finger protein 483 isoform X1 |
Phylogenetic-based propagation of functional annotations within the Gene Ontology consortium.
Gaudet P, Livstone MS, Lewis SE, Thomas PD
Briefings in bioinformatics12(5)449-62(2011 Sep)
A conditional knockout resource for the genome-wide study of mouse gene function.
Skarnes WC, Rosen B, West AP, Koutsourakis M, Bushell W, Iyer V, Mujica AO, Thomas M, Harrow J, Cox T, Jackson D, Severin J, Biggs P, Fu J, Nefedov M, de Jong PJ, Stewart AF, Bradley A
Nature474(7351)337-42(2011 Jun)
A high-resolution anatomical atlas of the transcriptome in the mouse embryo.
Diez-Roux G, Banfi S, Sultan M, Geffers L, Anand S, Rozado D, Magen A, Canidio E, Pagani M, Peluso I, Lin-Marq N, Koch M, Bilio M, Cantiello I, Verde R, De Masi C, Bianchi SA, Cicchini J, Perroud E, Mehmeti S, Dagand E, Schrinner S, N?rnberger A, Schmidt K, Metz K, Zwingmann C, Brieske N, Springer C, Hernandez AM, Herzog S, Grabbe F, Sieverding C, Fischer B, Schrader K, Brockmeyer M, Dettmer S, Helbig C, Alunni V, Battaini MA, Mura C, Henrichsen CN, Garcia-Lopez R, Echevarria D, Puelles E, Garcia-Calero E, Kruse S, Uhr M, Kauck C, Feng G, Milyaev N, Ong CK, Kumar L, Lam M, Semple CA, Gyenesei A, Mundlos S, Radelof U, Lehrach H, Sarmientos P, Reymond A, Davidson DR, Doll? P, Antonarakis SE, Yaspo ML, Martinez S, Baldock RA, Eichele G, Ballabio A
PLoS biology9(1)e1000582(2011 Jan)
GUDMAP: the genitourinary developmental molecular anatomy project.
McMahon AP, Aronow BJ, Davidson DR, Davies JA, Gaido KW, Grimmond S, Lessard JL, Little MH, Potter SS, Wilder EL, Zhang P,
Journal of the American Society of Nephrology : JASN19(4)667-71(2008 Apr)
GenePaint.org: an atlas of gene expression patterns in the mouse embryo.
Visel A, Thaller C, Eichele G
Nucleic acids research32(Database issue)D552-6(2004 Jan)
GeneRIFs: Gene References Into Functions What's a GeneRIF?
The following ZKSCAN16 gene cDNA ORF clone sequences were retrieved from the NCBI Reference Sequence Database (RefSeq). These sequences represent the protein coding region of the ZKSCAN16 cDNA ORF which is encoded by the open reading frame (ORF) sequence. ORF sequences can be delivered in our standard vector, pcDNA3.1+/C-(K)DYK or the vector of your choice as an expression/transfection-ready ORF clone. Not the clone you want? Click here to find your clone.
CloneID | OMu03331 | |
Clone ID Related Accession (Same CDS sequence) | XM_006537508.2 , NM_001355408.1 , NM_001099323.2 , NM_001099323.3 , XM_011249892.1 | |
Accession Version | NM_001355408.1 Latest version! | Documents for ORF clone product in default vector |
Sequence Information | ORF Nucleotide Sequence (Length: 2187bp) Protein sequence SNP |
|
Vector | pcDNA3.1-C-(k)DYK or customized vector | User Manual |
Clone information | Clone Map | MSDS |
Tag on pcDNA3.1+/C-(K)DYK | C terminal DYKDDDDK tags | |
ORF Insert Method | CloneEZ™ Seamless cloning technology | |
Insert Structure | linear | |
Update Date | 2019-10-24 | |
Organism | Mus musculus(house mouse) | |
Product | zinc finger protein 483 | |
Comment | Comment: VALIDATED REFSEQ: This record has undergone validation or preliminary review. The reference sequence was derived from AL805972.11 and AK032125.1. On Sep 20, 2017 this sequence version replaced XM_011249892.1. Sequence Note: This RefSeq record was created from transcript and genomic sequence data to make the sequence consistent with the reference genome assembly. The genomic coordinates used for the transcript record were based on transcript alignments. ##Evidence-Data-START## Transcript exon combination :: SRR1660819.46383.1, SRR1660825.136424.1 [ECO:0000332] RNAseq introns :: single sample supports all introns SAMN01164131, SAMN01164132 [ECO:0000348] ##Evidence-Data-END## |
1 | ATGCAAGGTT TAGTGCCCTC AGACATGACG ACAGGCCCCT CAGCTTTGGC TTTGAGTGAA |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
RefSeq | NP_001342337.1 |
CDS | 377..2563 |
Translation |
Target ORF information:
Target ORF information:
|
NM_001355408.1 |
1 | ATGCAAGGTT TAGTGCCCTC AGACATGACG ACAGGCCCCT CAGCTTTGGC TTTGAGTGAA |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
CloneID | OMu03331 | |
Clone ID Related Accession (Same CDS sequence) | XM_006537508.2 , NM_001355408.1 , NM_001099323.2 , NM_001099323.3 , XM_011249892.1 | |
Accession Version | NM_001099323.2 | Documents for ORF clone product in default vector |
Sequence Information | ORF Nucleotide Sequence (Length: 2187bp) Protein sequence SNP |
|
Vector | pcDNA3.1-C-(k)DYK or customized vector | User Manual |
Clone information | Clone Map | MSDS |
Tag on pcDNA3.1+/C-(K)DYK | C terminal DYKDDDDK tags | |
ORF Insert Method | CloneEZ™ Seamless cloning technology | |
Insert Structure | linear | |
Update Date | 2015-02-14 | |
Organism | Mus musculus(House mouse) | |
Product | zinc finger protein 483 | |
Comment | VALIDATED REFSEQ: This record has undergone validation or preliminary review. The reference sequence was derived from AL805972.11. On or before Jul 25, 2007 this sequence version replaced XM_001476620.1, NM_001099323.1. Sequence Note: The RefSeq transcript and protein were derived from genomic sequence to make the sequence consistent with the reference genome assembly. The genomic coordinates used for the transcript record were based on alignments. ##Evidence-Data-START## RNAseq introns :: single sample supports all introns SAMN00849384, SAMN01164131 [ECO:0000348] ##Evidence-Data-END## |
1 | ATGCAAGGTT TAGTGCCCTC AGACATGACG ACAGGCCCCT CAGCTTTGGC TTTGAGTGAA |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
RefSeq | NP_001092793.1 |
CDS | 159..2345 |
Translation |
Target ORF information:
Target ORF information:
|
NM_001099323.2 |
1 | ATGCAAGGTT TAGTGCCCTC AGACATGACG ACAGGCCCCT CAGCTTTGGC TTTGAGTGAA |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
CloneID | OMu03331 | |
Clone ID Related Accession (Same CDS sequence) | XM_006537508.2 , NM_001355408.1 , NM_001099323.2 , NM_001099323.3 , XM_011249892.1 | |
Accession Version | NM_001099323.3 Latest version! | Documents for ORF clone product in default vector |
Sequence Information | ORF Nucleotide Sequence (Length: 2187bp) Protein sequence SNP |
|
Vector | pcDNA3.1-C-(k)DYK or customized vector | User Manual |
Clone information | Clone Map | MSDS |
Tag on pcDNA3.1+/C-(K)DYK | C terminal DYKDDDDK tags | |
ORF Insert Method | CloneEZ™ Seamless cloning technology | |
Insert Structure | linear | |
Update Date | 2018-06-02 | |
Organism | Mus musculus(house mouse) | |
Product | zinc finger protein 483 | |
Comment | Comment: VALIDATED REFSEQ: This record has undergone validation or preliminary review. The reference sequence was derived from AL805972.11 and AK032125.1. On Sep 20, 2017 this sequence version replaced NM_001099323.2. Sequence Note: This RefSeq record was created from transcript and genomic sequence data to make the sequence consistent with the reference genome assembly. The genomic coordinates used for the transcript record were based on transcript alignments. ##Evidence-Data-START## CDS exon combination :: SRR1660823.136424.1, SRR1660825.136424.1 [ECO:0000331] RNAseq introns :: single sample supports all introns SAMN00849384, SAMN01164131 [ECO:0000348] ##Evidence-Data-END## |
1 | ATGCAAGGTT TAGTGCCCTC AGACATGACG ACAGGCCCCT CAGCTTTGGC TTTGAGTGAA |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
RefSeq | NP_001092793.1 |
CDS | 159..2345 |
Translation |
Target ORF information:
Target ORF information:
|
NM_001099323.3 |
1 | ATGCAAGGTT TAGTGCCCTC AGACATGACG ACAGGCCCCT CAGCTTTGGC TTTGAGTGAA |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
CloneID | OMu03331 | |
Clone ID Related Accession (Same CDS sequence) | XM_006537508.2 , NM_001355408.1 , NM_001099323.2 , NM_001099323.3 , XM_011249892.1 | |
Accession Version | XM_006537508.2 Latest version! | Documents for ORF clone product in default vector |
Sequence Information | ORF Nucleotide Sequence (Length: 2187bp) Protein sequence SNP |
|
Vector | pcDNA3.1-C-(k)DYK or customized vector | User Manual |
Clone information | Clone Map | MSDS |
Tag on pcDNA3.1+/C-(K)DYK | C terminal DYKDDDDK tags | |
ORF Insert Method | CloneEZ™ Seamless cloning technology | |
Insert Structure | linear | |
Update Date | 2019-08-07 | |
Organism | Mus musculus(house mouse) | |
Product | zinc finger protein 483 isoform X1 | |
Comment | Comment: MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NC_000070.6) annotated using gene prediction method: Gnomon, supported by mRNA and EST evidence. Also see: Documentation of NCBI's Annotation Process On Feb 9, 2015 this sequence version replaced XM_006537508.1. ##Genome-Annotation-Data-START## Annotation Provider :: NCBI Annotation Status :: Full annotation Annotation Name :: Mus musculus Annotation Release 108 Annotation Version :: 108 Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline Annotation Software Version :: 8.2 Annotation Method :: Best-placed RefSeq; Gnomon Features Annotated :: Gene; mRNA; CDS; ncRNA ##Genome-Annotation-Data-END## |
1 | ATGCAAGGTT TAGTGCCCTC AGACATGACG ACAGGCCCCT CAGCTTTGGC TTTGAGTGAA |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
RefSeq | XP_006537571.1 |
CDS | 428..2614 |
Translation |
Target ORF information:
Target ORF information:
|
XM_006537508.2 |
1 | ATGCAAGGTT TAGTGCCCTC AGACATGACG ACAGGCCCCT CAGCTTTGGC TTTGAGTGAA |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
CloneID | OMu03331 | |
Clone ID Related Accession (Same CDS sequence) | XM_006537508.2 , NM_001355408.1 , NM_001099323.2 , NM_001099323.3 , XM_011249892.1 | |
Accession Version | XM_011249892.1 Latest version! | Documents for ORF clone product in default vector |
Sequence Information | ORF Nucleotide Sequence (Length: 2187bp) Protein sequence SNP |
|
Vector | pcDNA3.1-C-(k)DYK or customized vector | User Manual |
Clone information | Clone Map | MSDS |
Tag on pcDNA3.1+/C-(K)DYK | C terminal DYKDDDDK tags | |
ORF Insert Method | CloneEZ™ Seamless cloning technology | |
Insert Structure | linear | |
Update Date | 2016-06-21 | |
Organism | Mus musculus(House mouse) | |
Product | zinc finger protein 483 isoform X1 | |
Comment | MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NC_000070.6) annotated using gene prediction method: Gnomon, supported by mRNA and EST evidence. Also see: Documentation of NCBI's Annotation Process ##Genome-Annotation-Data-START## Annotation Provider :: NCBI Annotation Status :: Full annotation Annotation Version :: Mus musculus Annotation Release 106 Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline Annotation Software Version :: 7.1 Annotation Method :: Best-placed RefSeq; Gnomon Features Annotated :: Gene; mRNA; CDS; ncRNA ##Genome-Annotation-Data-END## |
1 | ATGCAAGGTT TAGTGCCCTC AGACATGACG ACAGGCCCCT CAGCTTTGGC TTTGAGTGAA |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
RefSeq | XP_011248194.1 |
CDS | 437..2623 |
Translation |
Target ORF information:
Target ORF information:
|
XM_011249892.1 |
1 | ATGCAAGGTT TAGTGCCCTC AGACATGACG ACAGGCCCCT CAGCTTTGGC TTTGAGTGAA |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
Phylogenetic-based propagation of functional annotations within the Gene Ontology consortium. |
A conditional knockout resource for the genome-wide study of mouse gene function. |
A high-resolution anatomical atlas of the transcriptome in the mouse embryo. |
GUDMAP: the genitourinary developmental molecular anatomy project. |
GenePaint.org: an atlas of gene expression patterns in the mouse embryo. |