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Tsr1 cDNA ORF clone, Mus musculus(house mouse)

Summary

Gene Symbol Tsr1
Entrez Gene ID 104662
Full Name TSR1 20S rRNA accumulation
Synonyms AU040765,AW550801,mKIAA1401
General protein information
Preferred Names

TSR1 20S rRNA accumulation

Names

pre-rRNA-processing protein TSR1 homolog
TSR1, 20S rRNA accumulation, homolog
Gene Type protein-coding
Organism Mus musculus(house mouse)
Genome

11

11|11 B5

Reference Sequences (RefSeq)

mRNA and Protein(s)

mRNA Protein Name
NM_177325.3 NP_796299.2 pre-rRNA-processing protein TSR1 homolog

Pathways from BioSystems


Homologies


Homo sapiens (human) TSR1 NP_060598.3
Rattus norvegicus (Norway rat) Tsr1 XP_002727820.1
Saccharomyces cerevisiae (baker's yeast) TSR1 NP_010223.1
Schizosaccharomyces pombe (fission yeast) SPAC23H4.15 NP_593391.1
Canis lupus familiaris (dog) LOC610048 XP_852531.1
Mus musculus (house mouse) Tsr1 NP_796299.2
Caenorhabditis elegans (roundworm) tag-151 NP_494840.1
Magnaporthe oryzae (rice blast fungus) MGG_01087 XP_003717850.1
Arabidopsis thaliana (thale cress) AT1G42440 NP_564480.1
Pan troglodytes (chimpanzee) TSR1 XP_003315339.1
TSR1 XP_001086730.1
Anopheles gambiae (African malaria mosquito) AgaP_AGAP009438 XP_307850.4
Kluyveromyces lactis KLLA0E05149g XP_454177.1
Neurospora crassa NCU01503 XP_956952.1
Canis lupus familiaris (dog) TSR1 XP_548321.4
Gallus gallus (chicken) LOC100857289 XP_004946616.1
Drosophila melanogaster (fruit fly) CG7338 NP_649304.1
Bos taurus (cattle) TSR1 NP_001095403.1
Danio rerio (zebrafish) tsr1 NP_001032447.2
Eremothecium gossypii AGOS_AER051C NP_984911.1
Oryza sativa (rice) Os11g0298400 NP_001067728.1

Gene Ontology


Bibliography

Related articles in PubMed

Tagging genes with cassette-exchange sites.
Cobellis G, Nicolaus G, Iovino M, Romito A, Marra E, Barbarisi M, Sardiello M, Di Giorgio FP, Iovino N, Zollo M, Ballabio A, Cortese R
Nucleic acids research33(4)e44(2005 Mar)

Prediction of the coding sequences of mouse homologues of KIAA gene: III. the complete nucleotide sequences of 500 mouse KIAA-homologous cDNAs identified by screening of terminal sequences of cDNA clones randomly sampled from size-fractionated libraries.
Okazaki N, Kikuno R, Ohara R, Inamoto S, Koseki H, Hiraoka S, Saga Y, Nagase T, Ohara O, Koga H
DNA research : an international journal for rapid publication of reports on genes and genomes10(4)167-80(2003 Aug)

BayGenomics: a resource of insertional mutations in mouse embryonic stem cells.
Stryke D, Kawamoto M, Huang CC, Johns SJ, King LA, Harper CA, Meng EC, Lee RE, Yee A, L'Italien L, Chuang PT, Young SG, Skarnes WC, Babbitt PC, Ferrin TE
Nucleic acids research31(1)278-81(2003 Jan)

Construction of long-transcript enriched cDNA libraries from submicrogram amounts of total RNAs by a universal PCR amplification method.
Piao Y, Ko NT, Lim MK, Ko MS
Genome research11(9)1553-8(2001 Sep)

GeneRIFs: Gene References Into Functions What's a GeneRIF?

The following Tsr1 gene cDNA ORF clone sequences were retrieved from the NCBI Reference Sequence Database (RefSeq). These sequences represent the protein coding region of the Tsr1 cDNA ORF which is encoded by the open reading frame (ORF) sequence. ORF sequences can be delivered in our standard vector, pcDNA3.1+/C-(K)DYK or the vector of your choice as an expression/transfection-ready ORF clone. Not the clone you want? Click here to find your clone.

***CloneID Accession No. Definition **Vector *Turnaround time Price (USD) Select
OMu14739 NM_177325.3
Latest version!		 Mus musculus TSR1 20S rRNA accumulation (Tsr1), mRNA. pcDNA3.1+/C-(K)DYK or customized vector 12-14 $391.30
$559.00

ORF Online Only Promotion

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** You may select a custom vector to replace pcDNA3.1+/C-(K)DYK after clone is added to cart.

** GenScript guarantees 100% sequence accuracy of all synthetic DNA constructs we deliver, but we do not guarantee protein expression in your experimental system. Protein expression is influenced by many factors that may vary between experiments or laboratories. In addition, please pay attention to the signal peptide, propeptide and transit peptide in target ORF, which may affect the choice of vector (N/C terminal tag vector).

***One clone ID might be correlated to multiple accession numbers, which share the same CDS sequence.

Reference Sequences (Refseq)


CloneID OMu14739
Clone ID Related Accession (Same CDS sequence) NM_177325.3
Accession Version NM_177325.3 Latest version! Documents for ORF clone product in default vector
Sequence Information ORF Nucleotide Sequence (Length: 2412bp)
Protein sequence
SNP
Vector pcDNA3.1+/C-(K)DYK or customized vector User Manual
Clone information Clone Map MSDS
Tag on pcDNA3.1+/C-(K)DYK C terminal DYKDDDDK tags
ORF Insert Method CloneEZ™ Seamless cloning technology
Insert Structure linear
Update Date 2019-08-03
Organism Mus musculus(house mouse)
Product pre-rRNA-processing protein TSR1 homolog
Comment Comment: VALIDATED REFSEQ: This record has undergone validation or preliminary review. The reference sequence was derived from CD547366.1, AK129350.1 and BF455129.1. On Mar 2, 2007 this sequence version replaced NM_177325.2. ##Evidence-Data-START## Transcript exon combination :: SRR1660815.71841.1, AK154063.1 [ECO:0000332] RNAseq introns :: single sample supports all introns SAMN00849380, SAMN00849381 [ECO:0000348] ##Evidence-Data-END## COMPLETENESS: complete on the 3' end. 

1
61
121
181
241
301
361
421
481
541
601
661
721
781
841
901
961
1021
1081
1141
1201
1261
1321
1381
1441
1501
1561
1621
1681
1741
1801
1861
1921
1981
2041
2101
2161
2221
2281
2341
2401
ATGGCGGCTC ACCGCTCCGG GCCGCTGAAG CAGCAGAATA AAGCTCATAA AGGCGGGCGG 
CATCACGGCG GTGGGTCCGC ACAACGGGAC AGCAAAGGCC GGGTAGGACC GAAAATCCTC 
TGCAAGAAGC TGAAGAGGCA GCTCAGCCGA ATAGACCAGA GGCATCGCGC CAGCCAGCTC 
CGAAAGCAAA AGAGGGAGTC GGTTCTGGCC GAGAAGAGGC AGCTGGGCAG CAAGGATGGT 
CCTCCACATC AGGTGCTGGT GGTGCCTCTG CACAGCAGGA TTTCCCTTCC AGAGGCATTT 
AAACTGCTTC AGAATGAAGA CTTGGGAACG GTGTATTTGA GTGAACGGGG AAGCACCCAG 
AGTTTTATGC TTCTGTGCCC TAGCTTGAAA CATCGATGGT TTTTCACATA TGCAAGACCA 
GGGGATCTGC ATACTCTGTT AGACATGGCT AAAGTCGCTG ATACCATTCT GTTCCTCCTG 
GACCCACTAG AAGGCTGGGA CAGTACGGGG GATTATTGCC TGTCTTGCCT TTTTGCTCAG 
GGCCTTCCCA CCTATACACT AGCTGTCCAG GGCCTTTCTG GCTTCCCACC AAAGAAACAA 
ATAGATGCCC GAAAGAAGCT AAGTAAAATG GTGGAGAAAC GCTTCCCTGA AGACAAACTT 
CTGCTCCTAG ACACGCAGCA GGAATCAGGA ATGCTACTTA GACAGTTGGC TAACCAGAAG 
CAACGGCATC TTGCTTTTCG GGATCGGCGA GCTTACTTGT TTGCCCATGT TGCTGACTTC 
GTGCCTAGTG AGGAGAGTGA CTTAGTGGGC ACCTTGAAAA TCTCAGGCTA TGTTCGTGGG 
AGGACTCTGA ATGTAAATAG CTTGCTGCAT ATCGTTGGAC ACGGTGATTT CCAAATGAAT 
CAAATAGATG CTCCTGTGGA TCCGTTCCCT TTAAATCCTA GAGTGATTAA ATCCCAGAAG 
AAACCAAACA TGGCAATGGA GGTTTGTGTT ACAGATGCTG CTCCTGACAT GGAAGAAGAC 
CTTAAGGTTC TGATGAAGGC AGACCCTGAT CACCAGGAGT CTTTACAAAC AGAGGCTATT 
CCAGATCCTA TGGAAGGAGA GCAGACCTGG CCCACTGAGG AAGAGCTGGA TGAGGCAGAT 
GACTTACTGA AGCAACGGTC CAGAGTGGTA AAGAAGGTCC CTAAAGGAAC ATCCAGTTAC 
CAGGCTGAGT GGATTCTGGA TGAAGGTGAT GAAAGTGATG GGGAAGGTGG TGAATATGAT 
GATATACAAC ACGAAGGTTT CATGGAAGAG GAGTCTCAGG ATGGGAGTGG TGAGGAAGAG 
GAGGAAGAAT GTGAAACTAT GACTCTCGGG GAGTCTGTGC GTGACGATCT ATACGATGAG 
AAAGTAGATG CAGAGGACGA GGAGAGAATG TTGGAGAAAT ATAAACAAGA AAGACTGGAA 
GAAATGTTTC CAGATGAAAT GGATACCCCC CGTGATGTAG CTGCTAGAAT TCGATTTCAG 
AAATATAGAG GCCTCAAGAG TTTCCGGACA TCTCCTTGGG ATCCTAAAGA AAACCTTCCT 
AGAGATTATG CTCGGATATT TCAGTTTCAG AATTTTGTTA ATACTAGAAA AAGAATTTTT 
AAAGAGATTG AGGAAAAAGA AGCTGAAGGA GCTGAGGTGG GCTGGTATGT CACACTCCAT 
GTTTCTGATG TCCCTGTCTC AGTGGTTGAG TATTTCAGGC AAGGAGCGCC CTTGATTGCA 
TTTTCTTTGC TACCTTATGA ACAGAAGATG TCTGTATTGA ACATGGTGGT GAGCCGGAAC 
CCTGGCAACA CGGAACCTGT GAAGGCGAAA GAAGAATTGA TCTTCCACTG TGGGTTCAGG 
CGCTTCCGAG CTTCGCCTTT GTTCTCTCAG CACACAGCAG CTGATAAACA TAAATTTCAA 
AGATTCCTGA CTGCTGATGC TGCCTTCGTG GTGACAGTGT TTGCGCCAAT CACGTTCCCT 
CCTGCATCTG TGCTGCTTTT CAAGCAGAGA AGAAATGGAA TGCACAGCCT CATCGCTACA 
GGCCATCTGT TTTCAGTGGA CCCAGACAGG ATGGTCATAA AGAGAGTGGT TCTAAGTGGT 
CATCCTTTTA AAATATTTAC CAAGATGGCA GTAGTGCGGT ACATGTTCTT CAACAGAGAG 
GATGTGATGT GGTTTAAGCC TGTGGAACTG AGAACCAAGT GGGGCCGCCG GGGACATATC 
AAAGAGCCTC TAGGTACCCA TGGCCATATG AAGTGCAGTT TTGATGGGAA GCTGAAATCT 
CAGGACACAG TATTAATGAA TCTCTATAAG CGAGTATTTC CCAAGTGGAC TTATGACCCA 
TATGTACCAG AGCCAGTACC TTGGGTTAAA AGTGACATCT CTTCAACAGT GTCTGAAGTA 
GACATGGAGT AA

The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.

RefSeq NP_796299.2
CDS40..2451
Translation

Target ORF information:

RefSeq Version NM_177325.3
Organism Mus musculus(house mouse)
Definition Mus musculus TSR1 20S rRNA accumulation (Tsr1), mRNA.

Target ORF information:

Epitope DYKDDDDK
Bacterial selection AMPR
Mammalian selection NeoR
Vector pcDNA3.1+/C-(K)DYK
 NM_177325.3

ORF Insert Sequence:

1
61
121
181
241
301
361
421
481
541
601
661
721
781
841
901
961
1021
1081
1141
1201
1261
1321
1381
1441
1501
1561
1621
1681
1741
1801
1861
1921
1981
2041
2101
2161
2221
2281
2341
2401
ATGGCGGCTC ACCGCTCCGG GCCGCTGAAG CAGCAGAATA AAGCTCATAA AGGCGGGCGG 
CATCACGGCG GTGGGTCCGC ACAACGGGAC AGCAAAGGCC GGGTAGGACC GAAAATCCTC 
TGCAAGAAGC TGAAGAGGCA GCTCAGCCGA ATAGACCAGA GGCATCGCGC CAGCCAGCTC 
CGAAAGCAAA AGAGGGAGTC GGTTCTGGCC GAGAAGAGGC AGCTGGGCAG CAAGGATGGT 
CCTCCACATC AGGTGCTGGT GGTGCCTCTG CACAGCAGGA TTTCCCTTCC AGAGGCATTT 
AAACTGCTTC AGAATGAAGA CTTGGGAACG GTGTATTTGA GTGAACGGGG AAGCACCCAG 
AGTTTTATGC TTCTGTGCCC TAGCTTGAAA CATCGATGGT TTTTCACATA TGCAAGACCA 
GGGGATCTGC ATACTCTGTT AGACATGGCT AAAGTCGCTG ATACCATTCT GTTCCTCCTG 
GACCCACTAG AAGGCTGGGA CAGTACGGGG GATTATTGCC TGTCTTGCCT TTTTGCTCAG 
GGCCTTCCCA CCTATACACT AGCTGTCCAG GGCCTTTCTG GCTTCCCACC AAAGAAACAA 
ATAGATGCCC GAAAGAAGCT AAGTAAAATG GTGGAGAAAC GCTTCCCTGA AGACAAACTT 
CTGCTCCTAG ACACGCAGCA GGAATCAGGA ATGCTACTTA GACAGTTGGC TAACCAGAAG 
CAACGGCATC TTGCTTTTCG GGATCGGCGA GCTTACTTGT TTGCCCATGT TGCTGACTTC 
GTGCCTAGTG AGGAGAGTGA CTTAGTGGGC ACCTTGAAAA TCTCAGGCTA TGTTCGTGGG 
AGGACTCTGA ATGTAAATAG CTTGCTGCAT ATCGTTGGAC ACGGTGATTT CCAAATGAAT 
CAAATAGATG CTCCTGTGGA TCCGTTCCCT TTAAATCCTA GAGTGATTAA ATCCCAGAAG 
AAACCAAACA TGGCAATGGA GGTTTGTGTT ACAGATGCTG CTCCTGACAT GGAAGAAGAC 
CTTAAGGTTC TGATGAAGGC AGACCCTGAT CACCAGGAGT CTTTACAAAC AGAGGCTATT 
CCAGATCCTA TGGAAGGAGA GCAGACCTGG CCCACTGAGG AAGAGCTGGA TGAGGCAGAT 
GACTTACTGA AGCAACGGTC CAGAGTGGTA AAGAAGGTCC CTAAAGGAAC ATCCAGTTAC 
CAGGCTGAGT GGATTCTGGA TGAAGGTGAT GAAAGTGATG GGGAAGGTGG TGAATATGAT 
GATATACAAC ACGAAGGTTT CATGGAAGAG GAGTCTCAGG ATGGGAGTGG TGAGGAAGAG 
GAGGAAGAAT GTGAAACTAT GACTCTCGGG GAGTCTGTGC GTGACGATCT ATACGATGAG 
AAAGTAGATG CAGAGGACGA GGAGAGAATG TTGGAGAAAT ATAAACAAGA AAGACTGGAA 
GAAATGTTTC CAGATGAAAT GGATACCCCC CGTGATGTAG CTGCTAGAAT TCGATTTCAG 
AAATATAGAG GCCTCAAGAG TTTCCGGACA TCTCCTTGGG ATCCTAAAGA AAACCTTCCT 
AGAGATTATG CTCGGATATT TCAGTTTCAG AATTTTGTTA ATACTAGAAA AAGAATTTTT 
AAAGAGATTG AGGAAAAAGA AGCTGAAGGA GCTGAGGTGG GCTGGTATGT CACACTCCAT 
GTTTCTGATG TCCCTGTCTC AGTGGTTGAG TATTTCAGGC AAGGAGCGCC CTTGATTGCA 
TTTTCTTTGC TACCTTATGA ACAGAAGATG TCTGTATTGA ACATGGTGGT GAGCCGGAAC 
CCTGGCAACA CGGAACCTGT GAAGGCGAAA GAAGAATTGA TCTTCCACTG TGGGTTCAGG 
CGCTTCCGAG CTTCGCCTTT GTTCTCTCAG CACACAGCAG CTGATAAACA TAAATTTCAA 
AGATTCCTGA CTGCTGATGC TGCCTTCGTG GTGACAGTGT TTGCGCCAAT CACGTTCCCT 
CCTGCATCTG TGCTGCTTTT CAAGCAGAGA AGAAATGGAA TGCACAGCCT CATCGCTACA 
GGCCATCTGT TTTCAGTGGA CCCAGACAGG ATGGTCATAA AGAGAGTGGT TCTAAGTGGT 
CATCCTTTTA AAATATTTAC CAAGATGGCA GTAGTGCGGT ACATGTTCTT CAACAGAGAG 
GATGTGATGT GGTTTAAGCC TGTGGAACTG AGAACCAAGT GGGGCCGCCG GGGACATATC 
AAAGAGCCTC TAGGTACCCA TGGCCATATG AAGTGCAGTT TTGATGGGAA GCTGAAATCT 
CAGGACACAG TATTAATGAA TCTCTATAAG CGAGTATTTC CCAAGTGGAC TTATGACCCA 
TATGTACCAG AGCCAGTACC TTGGGTTAAA AGTGACATCT CTTCAACAGT GTCTGAAGTA 
GACATGGAGT AA

The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.

PubMed

book

Tagging genes with cassette-exchange sites.
Nucleic acids research33(4)e44(2005 Mar)
Cobellis G,Nicolaus G,Iovino M,Romito A,Marra E,Barbarisi M,Sardiello M,Di Giorgio FP,Iovino N,Zollo M,Ballabio A,Cortese R


book

Prediction of the coding sequences of mouse homologues of KIAA gene: III. the complete nucleotide sequences of 500 mouse KIAA-homologous cDNAs identified by screening of terminal sequences of cDNA clones randomly sampled from size-fractionated libraries.
DNA research : an international journal for rapid publication of reports on genes and genomes10(4)167-80(2003 Aug)
Okazaki N,Kikuno R,Ohara R,Inamoto S,Koseki H,Hiraoka S,Saga Y,Nagase T,Ohara O,Koga H


book

BayGenomics: a resource of insertional mutations in mouse embryonic stem cells.
Nucleic acids research31(1)278-81(2003 Jan)
Stryke D,Kawamoto M,Huang CC,Johns SJ,King LA,Harper CA,Meng EC,Lee RE,Yee A,L'Italien L,Chuang PT,Young SG,Skarnes WC,Babbitt PC,Ferrin TE


book

Construction of long-transcript enriched cDNA libraries from submicrogram amounts of total RNAs by a universal PCR amplification method.
Genome research11(9)1553-8(2001 Sep)
Piao Y,Ko NT,Lim MK,Ko MS