Gene Symbol | Cbll1 |
Entrez Gene ID | 104836 |
Full Name | Casitas B-lineage lymphoma-like 1 |
Synonyms | AI467391,Hakai,c-Cbl-like |
General protein information |
|
Gene Type | protein-coding |
Organism | Mus musculus(house mouse) |
Genome |
ORF » Species Summary » Mus musculus » Cbll1 cDNA ORF clone
gRNAs
Gene Symbol | Cbll1 |
Entrez Gene ID | 104836 |
Full Name | Casitas B-lineage lymphoma-like 1 |
Synonyms | AI467391,Hakai,c-Cbl-like |
General protein information |
|
Gene Type | protein-coding |
Organism | Mus musculus(house mouse) |
Genome |
mRNA | Protein | Name |
---|---|---|
XM_006514937.3 | XP_006515000.1 | E3 ubiquitin-protein ligase Hakai isoform X2 |
XM_006514941.2 | XP_006515004.1 | E3 ubiquitin-protein ligase Hakai isoform X6 |
XM_006514942.3 | XP_006515005.1 | E3 ubiquitin-protein ligase Hakai isoform X7 |
XM_017314930.1 | XP_017170419.1 | E3 ubiquitin-protein ligase Hakai isoform X8 |
XM_006514941.3 | XP_006515004.1 | E3 ubiquitin-protein ligase Hakai isoform X6 |
XM_017314930.2 | XP_017170419.1 | E3 ubiquitin-protein ligase Hakai isoform X9 |
NM_134048.2 | NP_598809.1 | E3 ubiquitin-protein ligase Hakai isoform 2 |
XM_006514938.3 | XP_006515001.1 | E3 ubiquitin-protein ligase Hakai isoform X3 |
XM_006514940.2 | XP_006515003.1 | E3 ubiquitin-protein ligase Hakai isoform X5 |
XM_006514938.4 | XP_006515001.1 | E3 ubiquitin-protein ligase Hakai isoform X3 |
XM_006514940.3 | XP_006515003.1 | E3 ubiquitin-protein ligase Hakai isoform X5 |
XM_006514936.3 | XP_006514999.1 | E3 ubiquitin-protein ligase Hakai isoform X1 |
XM_006514939.4 | XP_006515002.1 | E3 ubiquitin-protein ligase Hakai isoform X4 |
XM_006514942.4 | XP_006515005.1 | E3 ubiquitin-protein ligase Hakai isoform X7 |
NM_001253848.1 | NP_001240777.1 | E3 ubiquitin-protein ligase Hakai isoform 3 |
NM_001253847.1 | NP_001240776.1 | E3 ubiquitin-protein ligase Hakai isoform 1 |
XM_006514936.4 | XP_006514999.1 | E3 ubiquitin-protein ligase Hakai isoform X1 |
XM_006514937.4 | XP_006515000.1 | E3 ubiquitin-protein ligase Hakai isoform X2 |
XM_030246499.1 | XP_030102359.1 | E3 ubiquitin-protein ligase Hakai isoform X8 |
XM_006514939.3 | XP_006515002.1 | E3 ubiquitin-protein ligase Hakai isoform X4 |
Bos taurus (cattle) | CBLL1 | NP_001179521.1 |
Homo sapiens (human) | CBLL1 | NP_079090.2 |
CBLL1 | XP_001094529.1 | |
Mus musculus (house mouse) | Cbll1 | NP_001240776.1 |
Gallus gallus (chicken) | CBLL1 | NP_001007849.1 |
Pan troglodytes (chimpanzee) | CBLL1 | XP_001148913.2 |
Canis lupus familiaris (dog) | CBLL1 | XP_540381.3 |
Xenopus tropicalis (tropical clawed frog) | cbll1 | NP_001123714.1 |
Rattus norvegicus (Norway rat) | Cbll1 | NP_001101488.1 |
Danio rerio (zebrafish) | LOC100002706 | XP_005163097.1 |
The Vertebrate Genome Annotation browser 10 years on.
Harrow JL, Steward CA, Frankish A, Gilbert JG, Gonzalez JM, Loveland JE, Mudge J, Sheppard D, Thomas M, Trevanion S, Wilming LG
Nucleic acids research42(Database issue)D771-9(2014 Jan)
Structure of a novel phosphotyrosine-binding domain in Hakai that targets E-cadherin.
Mukherjee M, Chow SY, Yusoff P, Seetharaman J, Ng C, Sinniah S, Koh XW, Asgar NF, Li D, Yim D, Jackson RA, Yew J, Qian J, Iyu A, Lim YP, Zhou X, Sze SK, Guy GR, Sivaraman J
The EMBO journal31(5)1308-19(2012 Mar)
Novel roles of hakai in cell proliferation and oncogenesis.
Figueroa A, Kotani H, Toda Y, Mazan-Mamczarz K, Mueller EC, Otto A, Disch L, Norman M, Ramdasi RM, Keshtgar M, Gorospe M, Fujita Y
Molecular biology of the cell20(15)3533-42(2009 Aug)
Alteration of E-cadherin and beta-catenin in mouse vestibular epithelia during induction of apoptosis.
Kim TS, Nakagawa T, Endo T, Iguchi F, Murai N, Naito Y, Ito J
Neuroscience letters329(2)173-6(2002 Aug)
GeneRIFs: Gene References Into Functions What's a GeneRIF?
Results suggest that Hakai is an important regulator of cell proliferation and that Hakai may be an oncoprotein and a potential molecular target for cancer treatment.
Title: Novel roles of hakai in cell proliferation and oncogenesis.
E-cadherin distribution and expression is altered in utricle epithelia with induction of apoptosis.
Title: Alteration of E-cadherin and beta-catenin in mouse vestibular epithelia during induction of apoptosis.
The following Cbll1 gene cDNA ORF clone sequences were retrieved from the NCBI Reference Sequence Database (RefSeq). These sequences represent the protein coding region of the Cbll1 cDNA ORF which is encoded by the open reading frame (ORF) sequence. ORF sequences can be delivered in our standard vector, pcDNA3.1+/C-(K)DYK or the vector of your choice as an expression/transfection-ready ORF clone. Not the clone you want? Click here to find your clone.
CloneID | OMu05658 | |
Clone ID Related Accession (Same CDS sequence) | NM_001253847.1 | |
Accession Version | NM_001253847.1 Latest version! | Documents for ORF clone product in default vector |
Sequence Information | ORF Nucleotide Sequence (Length: 1476bp) Protein sequence SNP |
|
Vector | pcDNA3.1-C-(k)DYK or customized vector | ![]() |
Clone information | Clone Map | ![]() |
Tag on pcDNA3.1+/C-(K)DYK | C terminal DYKDDDDK tags | |
ORF Insert Method | CloneEZ™ Seamless cloning technology | |
Insert Structure | linear | |
Update Date | 2019-10-21 | |
Organism | Mus musculus(house mouse) | |
Product | E3 ubiquitin-protein ligase Hakai isoform 1 | |
Comment | Comment: VALIDATED REFSEQ: This record has undergone validation or preliminary review. The reference sequence was derived from CR974423.21 and AK051737.1. Transcript Variant: This variant (1) represents the longest transcript and encodes the longest isoform (1). Sequence Note: This RefSeq record was created from transcript and genomic sequence data to make the sequence consistent with the reference genome assembly. The genomic coordinates used for the transcript record were based on transcript alignments. ##Evidence-Data-START## Transcript exon combination :: AF167441.1, AK051737.1 [ECO:0000332] RNAseq introns :: mixed/partial sample support SAMN00849380, SAMN00849381 [ECO:0000350] ##Evidence-Data-END## |
1 | ATGGATCACA CTGACAATGA GTTACAAGGC ACTAATAGTT CTGGATCCTT GGGTGGTCTT |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
RefSeq | NP_001240776.1 |
CDS | 82..1557 |
Translation |
Target ORF information:
Target ORF information:
|
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1 | ATGGATCACA CTGACAATGA GTTACAAGGC ACTAATAGTT CTGGATCCTT GGGTGGTCTT |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
CloneID | OMu47217 | |
Clone ID Related Accession (Same CDS sequence) | XM_006514942.3 , XM_006514942.4 | |
Accession Version | XM_006514942.3 | Documents for ORF clone product in default vector |
Sequence Information | ORF Nucleotide Sequence (Length: 1326bp) Protein sequence SNP |
|
Vector | pcDNA3.1-C-(k)DYK or customized vector | ![]() |
Clone information | Clone Map | ![]() |
Tag on pcDNA3.1+/C-(K)DYK | C terminal DYKDDDDK tags | |
ORF Insert Method | CloneEZ™ Seamless cloning technology | |
Insert Structure | linear | |
Update Date | 2016-06-21 | |
Organism | Mus musculus(house mouse) | |
Product | E3 ubiquitin-protein ligase Hakai isoform X7 | |
Comment | Comment: MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NC_000078.6) annotated using gene prediction method: Gnomon, supported by mRNA and EST evidence. Also see: Documentation of NCBI's Annotation Process On Jun 22, 2016 this sequence version replaced XM_006514942.2. ##Genome-Annotation-Data-START## Annotation Provider :: NCBI Annotation Status :: Full annotation Annotation Version :: Mus musculus Annotation Release 106 Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline Annotation Software Version :: 7.1 Annotation Method :: Best-placed RefSeq; Gnomon Features Annotated :: Gene; mRNA; CDS; ncRNA ##Genome-Annotation-Data-END## |
1 | ATGCCCGCAA AGGCCCCGCA AGGTGATGAA GAAGGATTTG ATTATAACGA AGAACAGCGA |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
RefSeq | XP_006515005.1 |
CDS | 417..1742 |
Translation |
Target ORF information:
Target ORF information:
|
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1 | ATGCCCGCAA AGGCCCCGCA AGGTGATGAA GAAGGATTTG ATTATAACGA AGAACAGCGA |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
CloneID | OMu05660 | |
Clone ID Related Accession (Same CDS sequence) | NM_001253848.1 | |
Accession Version | NM_001253848.1 Latest version! | Documents for ORF clone product in default vector |
Sequence Information | ORF Nucleotide Sequence (Length: 999bp) Protein sequence SNP |
|
Vector | pcDNA3.1-C-(k)DYK or customized vector | ![]() |
Clone information | Clone Map | ![]() |
Tag on pcDNA3.1+/C-(K)DYK | C terminal DYKDDDDK tags | |
ORF Insert Method | CloneEZ™ Seamless cloning technology | |
Insert Structure | linear | |
Update Date | 2019-10-20 | |
Organism | Mus musculus(house mouse) | |
Product | E3 ubiquitin-protein ligase Hakai isoform 3 | |
Comment | Comment: VALIDATED REFSEQ: This record has undergone validation or preliminary review. The reference sequence was derived from CR974423.21. Transcript Variant: This variant (3) uses an alternate in-frame splice site and lacks an segment in the coding region, compared to variant 1. This results in a shorter protein (isoform 2), compared to isoform 1. Sequence Note: The RefSeq transcript and protein were derived from genomic sequence to make the sequence consistent with the reference genome assembly. The genomic coordinates used for the transcript record were based on alignments. ##Evidence-Data-START## Transcript exon combination :: AK166017.1 [ECO:0000332] RNAseq introns :: mixed/partial sample support SAMN00849380, SAMN00849381 [ECO:0000350] ##Evidence-Data-END## |
1 | ATGGATCACA CTGACAATGA GTTACAAGGC ACTAATAGTT CTGGATCCTT GGGTGGTCTT |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
RefSeq | NP_001240777.1 |
CDS | 82..1080 |
Translation |
Target ORF information:
Target ORF information:
|
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1 | ATGGATCACA CTGACAATGA GTTACAAGGC ACTAATAGTT CTGGATCCTT GGGTGGTCTT |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
CloneID | OMu10482 | |
Clone ID Related Accession (Same CDS sequence) | NM_134048.2 | |
Accession Version | NM_134048.2 Latest version! | Documents for ORF clone product in default vector |
Sequence Information | ORF Nucleotide Sequence (Length: 1473bp) Protein sequence SNP |
|
Vector | pcDNA3.1-C-(k)DYK or customized vector | ![]() |
Clone information | Clone Map | ![]() |
Tag on pcDNA3.1+/C-(K)DYK | C terminal DYKDDDDK tags | |
ORF Insert Method | CloneEZ™ Seamless cloning technology | |
Insert Structure | linear | |
Update Date | 2019-10-24 | |
Organism | Mus musculus(house mouse) | |
Product | E3 ubiquitin-protein ligase Hakai isoform 2 | |
Comment | Comment: VALIDATED REFSEQ: This record has undergone validation or preliminary review. The reference sequence was derived from CR974423.21 and BB651673.1. On Dec 8, 2011 this sequence version replaced NM_134048.1. Transcript Variant: This variant (2) uses an alternate in-frame splice site in the coding region, compared to variant 1. This results in a shorter protein (isoform 2), compared to isoform 1. Sequence Note: This RefSeq record was created from transcript and genomic sequence data to make the sequence consistent with the reference genome assembly. The genomic coordinates used for the transcript record were based on transcript alignments. ##Evidence-Data-START## Transcript exon combination :: BC019529.1, BF581029.1 [ECO:0000332] RNAseq introns :: mixed/partial sample support SAMN00849380, SAMN00849381 [ECO:0000350] ##Evidence-Data-END## |
1 | ATGGATCACA CTGACAATGA GTTACAAGGC ACTAATAGTT CTGGATCCTT GGGTGGTCTT |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
RefSeq | NP_598809.1 |
CDS | 82..1554 |
Translation |
Target ORF information:
Target ORF information:
|
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1 | ATGGATCACA CTGACAATGA GTTACAAGGC ACTAATAGTT CTGGATCCTT GGGTGGTCTT |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
CloneID | OMu47211 | |
Clone ID Related Accession (Same CDS sequence) | XM_006514936.3 , XM_006514936.4 | |
Accession Version | XM_006514936.3 | Documents for ORF clone product in default vector |
Sequence Information | ORF Nucleotide Sequence (Length: 1509bp) Protein sequence SNP |
|
Vector | pcDNA3.1-C-(k)DYK or customized vector | ![]() |
Clone information | Clone Map | ![]() |
Tag on pcDNA3.1+/C-(K)DYK | C terminal DYKDDDDK tags | |
ORF Insert Method | CloneEZ™ Seamless cloning technology | |
Insert Structure | linear | |
Update Date | 2016-06-21 | |
Organism | Mus musculus(house mouse) | |
Product | E3 ubiquitin-protein ligase Hakai isoform X1 | |
Comment | Comment: MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NC_000078.6) annotated using gene prediction method: Gnomon, supported by mRNA and EST evidence. Also see: Documentation of NCBI's Annotation Process On Jun 22, 2016 this sequence version replaced XM_006514936.2. ##Genome-Annotation-Data-START## Annotation Provider :: NCBI Annotation Status :: Full annotation Annotation Version :: Mus musculus Annotation Release 106 Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline Annotation Software Version :: 7.1 Annotation Method :: Best-placed RefSeq; Gnomon Features Annotated :: Gene; mRNA; CDS; ncRNA ##Genome-Annotation-Data-END## |
1 | ATGAAAGCGG CAACCACAGA CCCCAGGGAC CAAGAACTGG AACTAGACAA TGAGTTACAA |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
RefSeq | XP_006514999.1 |
CDS | 86..1594 |
Translation |
Target ORF information:
Target ORF information:
|
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1 | ATGAAAGCGG CAACCACAGA CCCCAGGGAC CAAGAACTGG AACTAGACAA TGAGTTACAA |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
CloneID | OMu47212 | |
Clone ID Related Accession (Same CDS sequence) | XM_006514937.3 , XM_006514937.4 | |
Accession Version | XM_006514937.3 | Documents for ORF clone product in default vector |
Sequence Information | ORF Nucleotide Sequence (Length: 1506bp) Protein sequence SNP |
|
Vector | pcDNA3.1-C-(k)DYK or customized vector | ![]() |
Clone information | Clone Map | ![]() |
Tag on pcDNA3.1+/C-(K)DYK | C terminal DYKDDDDK tags | |
ORF Insert Method | CloneEZ™ Seamless cloning technology | |
Insert Structure | linear | |
Update Date | 2016-06-21 | |
Organism | Mus musculus(house mouse) | |
Product | E3 ubiquitin-protein ligase Hakai isoform X2 | |
Comment | Comment: MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NC_000078.6) annotated using gene prediction method: Gnomon, supported by mRNA and EST evidence. Also see: Documentation of NCBI's Annotation Process On Jun 22, 2016 this sequence version replaced XM_006514937.2. ##Genome-Annotation-Data-START## Annotation Provider :: NCBI Annotation Status :: Full annotation Annotation Version :: Mus musculus Annotation Release 106 Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline Annotation Software Version :: 7.1 Annotation Method :: Best-placed RefSeq; Gnomon Features Annotated :: Gene; mRNA; CDS; ncRNA ##Genome-Annotation-Data-END## |
1 | ATGAAAGCGG CAACCACAGA CCCCAGGGAC CAAGAACTGG AACTAGACAA TGAGTTACAA |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
RefSeq | XP_006515000.1 |
CDS | 86..1591 |
Translation |
Target ORF information:
Target ORF information:
|
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1 | ATGAAAGCGG CAACCACAGA CCCCAGGGAC CAAGAACTGG AACTAGACAA TGAGTTACAA |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
CloneID | OMu47213 | |
Clone ID Related Accession (Same CDS sequence) | XM_006514938.3 , XM_006514938.4 | |
Accession Version | XM_006514938.3 | Documents for ORF clone product in default vector |
Sequence Information | ORF Nucleotide Sequence (Length: 1500bp) Protein sequence SNP |
|
Vector | pcDNA3.1-C-(k)DYK or customized vector | ![]() |
Clone information | Clone Map | ![]() |
Tag on pcDNA3.1+/C-(K)DYK | C terminal DYKDDDDK tags | |
ORF Insert Method | CloneEZ™ Seamless cloning technology | |
Insert Structure | linear | |
Update Date | 2016-06-21 | |
Organism | Mus musculus(house mouse) | |
Product | E3 ubiquitin-protein ligase Hakai isoform X3 | |
Comment | Comment: MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NC_000078.6) annotated using gene prediction method: Gnomon, supported by mRNA and EST evidence. Also see: Documentation of NCBI's Annotation Process On Jun 22, 2016 this sequence version replaced XM_006514938.2. ##Genome-Annotation-Data-START## Annotation Provider :: NCBI Annotation Status :: Full annotation Annotation Version :: Mus musculus Annotation Release 106 Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline Annotation Software Version :: 7.1 Annotation Method :: Best-placed RefSeq; Gnomon Features Annotated :: Gene; mRNA; CDS; ncRNA ##Genome-Annotation-Data-END## |
1 | ATGAAAGCGG CAACCACAGA CCCCAGGGAC CAAGAACTGG AACTAGACAA TGAGTTACAA |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
RefSeq | XP_006515001.1 |
CDS | 86..1585 |
Translation |
Target ORF information:
Target ORF information:
|
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1 | ATGAAAGCGG CAACCACAGA CCCCAGGGAC CAAGAACTGG AACTAGACAA TGAGTTACAA |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
CloneID | OMu47214 | |
Clone ID Related Accession (Same CDS sequence) | XM_006514939.4 , XM_006514939.3 | |
Accession Version | XM_006514939.3 | Documents for ORF clone product in default vector |
Sequence Information | ORF Nucleotide Sequence (Length: 1497bp) Protein sequence SNP |
|
Vector | pcDNA3.1-C-(k)DYK or customized vector | ![]() |
Clone information | Clone Map | ![]() |
Tag on pcDNA3.1+/C-(K)DYK | C terminal DYKDDDDK tags | |
ORF Insert Method | CloneEZ™ Seamless cloning technology | |
Insert Structure | linear | |
Update Date | 2016-06-21 | |
Organism | Mus musculus(house mouse) | |
Product | E3 ubiquitin-protein ligase Hakai isoform X4 | |
Comment | Comment: MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NC_000078.6) annotated using gene prediction method: Gnomon, supported by mRNA and EST evidence. Also see: Documentation of NCBI's Annotation Process On Jun 22, 2016 this sequence version replaced XM_006514939.2. ##Genome-Annotation-Data-START## Annotation Provider :: NCBI Annotation Status :: Full annotation Annotation Version :: Mus musculus Annotation Release 106 Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline Annotation Software Version :: 7.1 Annotation Method :: Best-placed RefSeq; Gnomon Features Annotated :: Gene; mRNA; CDS; ncRNA ##Genome-Annotation-Data-END## |
1 | ATGAAAGCGG CAACCACAGA CCCCAGGGAC CAAGAACTGG AACTAGACAA TGAGTTACAA |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
RefSeq | XP_006515002.1 |
CDS | 86..1582 |
Translation |
Target ORF information:
Target ORF information:
|
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1 | ATGAAAGCGG CAACCACAGA CCCCAGGGAC CAAGAACTGG AACTAGACAA TGAGTTACAA |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
CloneID | OMu47215 | |
Clone ID Related Accession (Same CDS sequence) | XM_006514940.2 , XM_006514940.3 | |
Accession Version | XM_006514940.2 | Documents for ORF clone product in default vector |
Sequence Information | ORF Nucleotide Sequence (Length: 1467bp) Protein sequence SNP |
|
Vector | pcDNA3.1-C-(k)DYK or customized vector | ![]() |
Clone information | Clone Map | ![]() |
Tag on pcDNA3.1+/C-(K)DYK | C terminal DYKDDDDK tags | |
ORF Insert Method | CloneEZ™ Seamless cloning technology | |
Insert Structure | linear | |
Update Date | 2016-06-21 | |
Organism | Mus musculus(house mouse) | |
Product | E3 ubiquitin-protein ligase Hakai isoform X5 | |
Comment | Comment: MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NC_000078.6) annotated using gene prediction method: Gnomon, supported by mRNA and EST evidence. Also see: Documentation of NCBI's Annotation Process On Jun 22, 2016 this sequence version replaced XM_006514940.1. ##Genome-Annotation-Data-START## Annotation Provider :: NCBI Annotation Status :: Full annotation Annotation Version :: Mus musculus Annotation Release 106 Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline Annotation Software Version :: 7.1 Annotation Method :: Best-placed RefSeq; Gnomon Features Annotated :: Gene; mRNA; CDS; ncRNA ##Genome-Annotation-Data-END## |
1 | ATGGATCACA CTGACAATGA GTTACAAGGC ACTAATAGTT CTGGATCCTT GGGTGGTCTT |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
RefSeq | XP_006515003.1 |
CDS | 801..2267 |
Translation |
Target ORF information:
Target ORF information:
|
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1 | ATGGATCACA CTGACAATGA GTTACAAGGC ACTAATAGTT CTGGATCCTT GGGTGGTCTT |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
CloneID | OMu47216 | |
Clone ID Related Accession (Same CDS sequence) | XM_006514941.2 , XM_006514941.3 | |
Accession Version | XM_006514941.2 | Documents for ORF clone product in default vector |
Sequence Information | ORF Nucleotide Sequence (Length: 1464bp) Protein sequence SNP |
|
Vector | pcDNA3.1-C-(k)DYK or customized vector | ![]() |
Clone information | Clone Map | ![]() |
Tag on pcDNA3.1+/C-(K)DYK | C terminal DYKDDDDK tags | |
ORF Insert Method | CloneEZ™ Seamless cloning technology | |
Insert Structure | linear | |
Update Date | 2016-06-21 | |
Organism | Mus musculus(house mouse) | |
Product | E3 ubiquitin-protein ligase Hakai isoform X6 | |
Comment | Comment: MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NC_000078.6) annotated using gene prediction method: Gnomon, supported by mRNA and EST evidence. Also see: Documentation of NCBI's Annotation Process On Jun 22, 2016 this sequence version replaced XM_006514941.1. ##Genome-Annotation-Data-START## Annotation Provider :: NCBI Annotation Status :: Full annotation Annotation Version :: Mus musculus Annotation Release 106 Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline Annotation Software Version :: 7.1 Annotation Method :: Best-placed RefSeq; Gnomon Features Annotated :: Gene; mRNA; CDS; ncRNA ##Genome-Annotation-Data-END## |
1 | ATGGATCACA CTGACAATGA GTTACAAGGC ACTAATAGTT CTGGATCCTT GGGTGGTCTT |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
RefSeq | XP_006515004.1 |
CDS | 801..2264 |
Translation |
Target ORF information:
Target ORF information:
|
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1 | ATGGATCACA CTGACAATGA GTTACAAGGC ACTAATAGTT CTGGATCCTT GGGTGGTCTT |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
CloneID | OMu47213 | |
Clone ID Related Accession (Same CDS sequence) | XM_006514938.3 , XM_006514938.4 | |
Accession Version | XM_006514938.4 Latest version! | Documents for ORF clone product in default vector |
Sequence Information | ORF Nucleotide Sequence (Length: 1500bp) Protein sequence SNP |
|
Vector | pcDNA3.1-C-(k)DYK or customized vector | ![]() |
Clone information | Clone Map | ![]() |
Tag on pcDNA3.1+/C-(K)DYK | C terminal DYKDDDDK tags | |
ORF Insert Method | CloneEZ™ Seamless cloning technology | |
Insert Structure | linear | |
Update Date | 2019-08-07 | |
Organism | Mus musculus(house mouse) | |
Product | E3 ubiquitin-protein ligase Hakai isoform X3 | |
Comment | Comment: MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NC_000078.6) annotated using gene prediction method: Gnomon, supported by mRNA and EST evidence. Also see: Documentation of NCBI's Annotation Process On Aug 8, 2019 this sequence version replaced XM_006514938.3. ##Genome-Annotation-Data-START## Annotation Provider :: NCBI Annotation Status :: Full annotation Annotation Name :: Mus musculus Annotation Release 108 Annotation Version :: 108 Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline Annotation Software Version :: 8.2 Annotation Method :: Best-placed RefSeq; Gnomon Features Annotated :: Gene; mRNA; CDS; ncRNA ##Genome-Annotation-Data-END## |
1 | ATGAAAGCGG CAACCACAGA CCCCAGGGAC CAAGAACTGG AACTAGACAA TGAGTTACAA |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
RefSeq | XP_006515001.1 |
CDS | 81..1580 |
Translation |
Target ORF information:
Target ORF information:
|
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1 | ATGAAAGCGG CAACCACAGA CCCCAGGGAC CAAGAACTGG AACTAGACAA TGAGTTACAA |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
CloneID | OMu47214 | |
Clone ID Related Accession (Same CDS sequence) | XM_006514939.4 , XM_006514939.3 | |
Accession Version | XM_006514939.4 Latest version! | Documents for ORF clone product in default vector |
Sequence Information | ORF Nucleotide Sequence (Length: 1497bp) Protein sequence SNP |
|
Vector | pcDNA3.1-C-(k)DYK or customized vector | ![]() |
Clone information | Clone Map | ![]() |
Tag on pcDNA3.1+/C-(K)DYK | C terminal DYKDDDDK tags | |
ORF Insert Method | CloneEZ™ Seamless cloning technology | |
Insert Structure | linear | |
Update Date | 2019-08-07 | |
Organism | Mus musculus(house mouse) | |
Product | E3 ubiquitin-protein ligase Hakai isoform X4 | |
Comment | Comment: MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NC_000078.6) annotated using gene prediction method: Gnomon, supported by mRNA and EST evidence. Also see: Documentation of NCBI's Annotation Process On Aug 8, 2019 this sequence version replaced XM_006514939.3. ##Genome-Annotation-Data-START## Annotation Provider :: NCBI Annotation Status :: Full annotation Annotation Name :: Mus musculus Annotation Release 108 Annotation Version :: 108 Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline Annotation Software Version :: 8.2 Annotation Method :: Best-placed RefSeq; Gnomon Features Annotated :: Gene; mRNA; CDS; ncRNA ##Genome-Annotation-Data-END## |
1 | ATGAAAGCGG CAACCACAGA CCCCAGGGAC CAAGAACTGG AACTAGACAA TGAGTTACAA |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
RefSeq | XP_006515002.1 |
CDS | 81..1577 |
Translation |
Target ORF information:
Target ORF information:
|
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1 | ATGAAAGCGG CAACCACAGA CCCCAGGGAC CAAGAACTGG AACTAGACAA TGAGTTACAA |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
CloneID | OMu47215 | |
Clone ID Related Accession (Same CDS sequence) | XM_006514940.2 , XM_006514940.3 | |
Accession Version | XM_006514940.3 Latest version! | Documents for ORF clone product in default vector |
Sequence Information | ORF Nucleotide Sequence (Length: 1467bp) Protein sequence SNP |
|
Vector | pcDNA3.1-C-(k)DYK or customized vector | ![]() |
Clone information | Clone Map | ![]() |
Tag on pcDNA3.1+/C-(K)DYK | C terminal DYKDDDDK tags | |
ORF Insert Method | CloneEZ™ Seamless cloning technology | |
Insert Structure | linear | |
Update Date | 2019-08-07 | |
Organism | Mus musculus(house mouse) | |
Product | E3 ubiquitin-protein ligase Hakai isoform X5 | |
Comment | Comment: MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NC_000078.6) annotated using gene prediction method: Gnomon, supported by mRNA and EST evidence. Also see: Documentation of NCBI's Annotation Process On Aug 8, 2019 this sequence version replaced XM_006514940.2. ##Genome-Annotation-Data-START## Annotation Provider :: NCBI Annotation Status :: Full annotation Annotation Name :: Mus musculus Annotation Release 108 Annotation Version :: 108 Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline Annotation Software Version :: 8.2 Annotation Method :: Best-placed RefSeq; Gnomon Features Annotated :: Gene; mRNA; CDS; ncRNA ##Genome-Annotation-Data-END## |
1 | ATGGATCACA CTGACAATGA GTTACAAGGC ACTAATAGTT CTGGATCCTT GGGTGGTCTT |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
RefSeq | XP_006515003.1 |
CDS | 1142..2608 |
Translation |
Target ORF information:
Target ORF information:
|
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1 | ATGGATCACA CTGACAATGA GTTACAAGGC ACTAATAGTT CTGGATCCTT GGGTGGTCTT |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
CloneID | OMu47216 | |
Clone ID Related Accession (Same CDS sequence) | XM_006514941.2 , XM_006514941.3 | |
Accession Version | XM_006514941.3 Latest version! | Documents for ORF clone product in default vector |
Sequence Information | ORF Nucleotide Sequence (Length: 1464bp) Protein sequence SNP |
|
Vector | pcDNA3.1-C-(k)DYK or customized vector | ![]() |
Clone information | Clone Map | ![]() |
Tag on pcDNA3.1+/C-(K)DYK | C terminal DYKDDDDK tags | |
ORF Insert Method | CloneEZ™ Seamless cloning technology | |
Insert Structure | linear | |
Update Date | 2019-08-07 | |
Organism | Mus musculus(house mouse) | |
Product | E3 ubiquitin-protein ligase Hakai isoform X6 | |
Comment | Comment: MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NC_000078.6) annotated using gene prediction method: Gnomon, supported by mRNA and EST evidence. Also see: Documentation of NCBI's Annotation Process On Aug 8, 2019 this sequence version replaced XM_006514941.2. ##Genome-Annotation-Data-START## Annotation Provider :: NCBI Annotation Status :: Full annotation Annotation Name :: Mus musculus Annotation Release 108 Annotation Version :: 108 Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline Annotation Software Version :: 8.2 Annotation Method :: Best-placed RefSeq; Gnomon Features Annotated :: Gene; mRNA; CDS; ncRNA ##Genome-Annotation-Data-END## |
1 | ATGGATCACA CTGACAATGA GTTACAAGGC ACTAATAGTT CTGGATCCTT GGGTGGTCTT |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
RefSeq | XP_006515004.1 |
CDS | 82..1545 |
Translation |
Target ORF information:
Target ORF information:
|
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1 | ATGGATCACA CTGACAATGA GTTACAAGGC ACTAATAGTT CTGGATCCTT GGGTGGTCTT |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
CloneID | OMu47217 | |
Clone ID Related Accession (Same CDS sequence) | XM_006514942.3 , XM_006514942.4 | |
Accession Version | XM_006514942.4 Latest version! | Documents for ORF clone product in default vector |
Sequence Information | ORF Nucleotide Sequence (Length: 1326bp) Protein sequence SNP |
|
Vector | pcDNA3.1-C-(k)DYK or customized vector | ![]() |
Clone information | Clone Map | ![]() |
Tag on pcDNA3.1+/C-(K)DYK | C terminal DYKDDDDK tags | |
ORF Insert Method | CloneEZ™ Seamless cloning technology | |
Insert Structure | linear | |
Update Date | 2019-08-07 | |
Organism | Mus musculus(house mouse) | |
Product | E3 ubiquitin-protein ligase Hakai isoform X7 | |
Comment | Comment: MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NC_000078.6) annotated using gene prediction method: Gnomon, supported by mRNA and EST evidence. Also see: Documentation of NCBI's Annotation Process On Aug 8, 2019 this sequence version replaced XM_006514942.3. ##Genome-Annotation-Data-START## Annotation Provider :: NCBI Annotation Status :: Full annotation Annotation Name :: Mus musculus Annotation Release 108 Annotation Version :: 108 Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline Annotation Software Version :: 8.2 Annotation Method :: Best-placed RefSeq; Gnomon Features Annotated :: Gene; mRNA; CDS; ncRNA ##Genome-Annotation-Data-END## |
1 | ATGCCCGCAA AGGCCCCGCA AGGTGATGAA GAAGGATTTG ATTATAACGA AGAACAGCGA |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
RefSeq | XP_006515005.1 |
CDS | 422..1747 |
Translation |
Target ORF information:
Target ORF information:
|
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1 | ATGCCCGCAA AGGCCCCGCA AGGTGATGAA GAAGGATTTG ATTATAACGA AGAACAGCGA |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
CloneID | OMu78127 | |
Clone ID Related Accession (Same CDS sequence) | XM_017314930.1 , XM_017314930.2 | |
Accession Version | XM_017314930.1 | Documents for ORF clone product in default vector |
Sequence Information | ORF Nucleotide Sequence (Length: 1317bp) Protein sequence SNP |
|
Vector | pcDNA3.1-C-(k)DYK or customized vector | ![]() |
Clone information | Clone Map | ![]() |
Tag on pcDNA3.1+/C-(K)DYK | C terminal DYKDDDDK tags | |
ORF Insert Method | CloneEZ™ Seamless cloning technology | |
Insert Structure | linear | |
Update Date | 2016-06-21 | |
Organism | Mus musculus(house mouse) | |
Product | E3 ubiquitin-protein ligase Hakai isoform X8 | |
Comment | Comment: MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NC_000078.6) annotated using gene prediction method: Gnomon, supported by mRNA and EST evidence. Also see: Documentation of NCBI's Annotation Process ##Genome-Annotation-Data-START## Annotation Provider :: NCBI Annotation Status :: Full annotation Annotation Version :: Mus musculus Annotation Release 106 Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline Annotation Software Version :: 7.1 Annotation Method :: Best-placed RefSeq; Gnomon Features Annotated :: Gene; mRNA; CDS; ncRNA ##Genome-Annotation-Data-END## |
1 | ATGCCCGCAA AGGCCCCGCA AGAAGGATTT GATTATAACG AAGAACAGCG ATATGACTGT |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
RefSeq | XP_017170419.1 |
CDS | 394..1710 |
Translation |
Target ORF information:
Target ORF information:
|
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1 | ATGCCCGCAA AGGCCCCGCA AGAAGGATTT GATTATAACG AAGAACAGCG ATATGACTGT |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
CloneID | OMu78127 | |
Clone ID Related Accession (Same CDS sequence) | XM_017314930.1 , XM_017314930.2 | |
Accession Version | XM_017314930.2 Latest version! | Documents for ORF clone product in default vector |
Sequence Information | ORF Nucleotide Sequence (Length: 1317bp) Protein sequence SNP |
|
Vector | pcDNA3.1-C-(k)DYK or customized vector | ![]() |
Clone information | Clone Map | ![]() |
Tag on pcDNA3.1+/C-(K)DYK | C terminal DYKDDDDK tags | |
ORF Insert Method | CloneEZ™ Seamless cloning technology | |
Insert Structure | linear | |
Update Date | 2019-08-07 | |
Organism | Mus musculus(house mouse) | |
Product | E3 ubiquitin-protein ligase Hakai isoform X9 | |
Comment | Comment: MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NC_000078.6) annotated using gene prediction method: Gnomon, supported by mRNA and EST evidence. Also see: Documentation of NCBI's Annotation Process On Aug 8, 2019 this sequence version replaced XM_017314930.1. ##Genome-Annotation-Data-START## Annotation Provider :: NCBI Annotation Status :: Full annotation Annotation Name :: Mus musculus Annotation Release 108 Annotation Version :: 108 Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline Annotation Software Version :: 8.2 Annotation Method :: Best-placed RefSeq; Gnomon Features Annotated :: Gene; mRNA; CDS; ncRNA ##Genome-Annotation-Data-END## |
1 | ATGCCCGCAA AGGCCCCGCA AGAAGGATTT GATTATAACG AAGAACAGCG ATATGACTGT |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
RefSeq | XP_017170419.1 |
CDS | 363..1679 |
Translation |
Target ORF information:
Target ORF information:
|
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1 | ATGCCCGCAA AGGCCCCGCA AGAAGGATTT GATTATAACG AAGAACAGCG ATATGACTGT |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
CloneID | OMu85978 | |
Clone ID Related Accession (Same CDS sequence) | XM_030246499.1 | |
Accession Version | XM_030246499.1 Latest version! | Documents for ORF clone product in default vector |
Sequence Information | ORF Nucleotide Sequence (Length: 1323bp) Protein sequence SNP |
|
Vector | pcDNA3.1-C-(k)DYK or customized vector | ![]() |
Clone information | Clone Map | ![]() |
Tag on pcDNA3.1+/C-(K)DYK | C terminal DYKDDDDK tags | |
ORF Insert Method | CloneEZ™ Seamless cloning technology | |
Insert Structure | linear | |
Update Date | 2019-08-07 | |
Organism | Mus musculus(house mouse) | |
Product | E3 ubiquitin-protein ligase Hakai isoform X8 | |
Comment | Comment: MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NC_000078.6) annotated using gene prediction method: Gnomon, supported by mRNA and EST evidence. Also see: Documentation of NCBI's Annotation Process ##Genome-Annotation-Data-START## Annotation Provider :: NCBI Annotation Status :: Full annotation Annotation Name :: Mus musculus Annotation Release 108 Annotation Version :: 108 Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline Annotation Software Version :: 8.2 Annotation Method :: Best-placed RefSeq; Gnomon Features Annotated :: Gene; mRNA; CDS; ncRNA ##Genome-Annotation-Data-END## |
1 | ATGCCCGCAA AGGCCCCGCA AGGTGATGAA GGATTTGATT ATAACGAAGA ACAGCGATAT |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
RefSeq | XP_030102359.1 |
CDS | 363..1685 |
Translation |
Target ORF information:
Target ORF information:
|
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1 | ATGCCCGCAA AGGCCCCGCA AGGTGATGAA GGATTTGATT ATAACGAAGA ACAGCGATAT |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
CloneID | OMu47211 | |
Clone ID Related Accession (Same CDS sequence) | XM_006514936.3 , XM_006514936.4 | |
Accession Version | XM_006514936.4 Latest version! | Documents for ORF clone product in default vector |
Sequence Information | ORF Nucleotide Sequence (Length: 1509bp) Protein sequence SNP |
|
Vector | pcDNA3.1-C-(k)DYK or customized vector | ![]() |
Clone information | Clone Map | ![]() |
Tag on pcDNA3.1+/C-(K)DYK | C terminal DYKDDDDK tags | |
ORF Insert Method | CloneEZ™ Seamless cloning technology | |
Insert Structure | linear | |
Update Date | 2019-08-07 | |
Organism | Mus musculus(house mouse) | |
Product | E3 ubiquitin-protein ligase Hakai isoform X1 | |
Comment | Comment: MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NC_000078.6) annotated using gene prediction method: Gnomon, supported by mRNA and EST evidence. Also see: Documentation of NCBI's Annotation Process On Aug 8, 2019 this sequence version replaced XM_006514936.3. ##Genome-Annotation-Data-START## Annotation Provider :: NCBI Annotation Status :: Full annotation Annotation Name :: Mus musculus Annotation Release 108 Annotation Version :: 108 Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline Annotation Software Version :: 8.2 Annotation Method :: Best-placed RefSeq; Gnomon Features Annotated :: Gene; mRNA; CDS; ncRNA ##Genome-Annotation-Data-END## |
1 | ATGAAAGCGG CAACCACAGA CCCCAGGGAC CAAGAACTGG AACTAGACAA TGAGTTACAA |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
RefSeq | XP_006514999.1 |
CDS | 81..1589 |
Translation |
Target ORF information:
Target ORF information:
|
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1 | ATGAAAGCGG CAACCACAGA CCCCAGGGAC CAAGAACTGG AACTAGACAA TGAGTTACAA |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
CloneID | OMu47212 | |
Clone ID Related Accession (Same CDS sequence) | XM_006514937.3 , XM_006514937.4 | |
Accession Version | XM_006514937.4 Latest version! | Documents for ORF clone product in default vector |
Sequence Information | ORF Nucleotide Sequence (Length: 1506bp) Protein sequence SNP |
|
Vector | pcDNA3.1-C-(k)DYK or customized vector | ![]() |
Clone information | Clone Map | ![]() |
Tag on pcDNA3.1+/C-(K)DYK | C terminal DYKDDDDK tags | |
ORF Insert Method | CloneEZ™ Seamless cloning technology | |
Insert Structure | linear | |
Update Date | 2019-08-07 | |
Organism | Mus musculus(house mouse) | |
Product | E3 ubiquitin-protein ligase Hakai isoform X2 | |
Comment | Comment: MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NC_000078.6) annotated using gene prediction method: Gnomon, supported by mRNA and EST evidence. Also see: Documentation of NCBI's Annotation Process On Aug 8, 2019 this sequence version replaced XM_006514937.3. ##Genome-Annotation-Data-START## Annotation Provider :: NCBI Annotation Status :: Full annotation Annotation Name :: Mus musculus Annotation Release 108 Annotation Version :: 108 Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline Annotation Software Version :: 8.2 Annotation Method :: Best-placed RefSeq; Gnomon Features Annotated :: Gene; mRNA; CDS; ncRNA ##Genome-Annotation-Data-END## |
1 | ATGAAAGCGG CAACCACAGA CCCCAGGGAC CAAGAACTGG AACTAGACAA TGAGTTACAA |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
RefSeq | XP_006515000.1 |
CDS | 81..1586 |
Translation |
Target ORF information:
Target ORF information:
|
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1 | ATGAAAGCGG CAACCACAGA CCCCAGGGAC CAAGAACTGG AACTAGACAA TGAGTTACAA |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
The Vertebrate Genome Annotation browser 10 years on. |
Structure of a novel phosphotyrosine-binding domain in Hakai that targets E-cadherin. |
Novel roles of hakai in cell proliferation and oncogenesis. |
Alteration of E-cadherin and beta-catenin in mouse vestibular epithelia during induction of apoptosis. |