Gene Symbol
Cbx1
Entrez Gene ID
12412
Full Name
chromobox 1
Synonyms
Cbx,Cbx-rs2,E430007M08Rik,HP1B,Hp1beta,M31,MOD1
General protein information
Preferred Nameschromobox 1
Nameschromobox protein homolog 1 HP1 beta chromobox homolog 1 heterochromatin protein 1 homolog beta heterochromatin protein p25 modifier 1 protein
Gene Type
protein-coding
Organism
Mus musculus(house mouse)
Genome
Chromosome: 11
Map Location: 11 D|11 60.11 cM
mRNA and Protein(s)
mRNA
Protein
Name
XM_006532102.2
XP_006532165.1
chromobox protein homolog 1 isoform X2
NM_001362564.1
NP_001349493.1
chromobox protein homolog 1 isoform 2
NM_001362563.1
NP_001349492.1
chromobox protein homolog 1 isoform 1
XM_017314242.1
XP_017169731.1
chromobox protein homolog 1 isoform X1
XM_011248704.2
XP_011247006.1
chromobox protein homolog 1 isoform X1
XM_006532100.2
XP_006532163.1
chromobox protein homolog 1 isoform X1
XM_006532102.3
XP_006532165.1
chromobox protein homolog 1 isoform X2
NM_001362560.1
NP_001349489.1
chromobox protein homolog 1 isoform 1
NM_001362561.1
NP_001349490.1
chromobox protein homolog 1 isoform 1
NM_007622.3
NP_031648.1
chromobox protein homolog 1
XM_006532099.2
XP_006532162.1
chromobox protein homolog 1 isoform X1
XM_017314242.2
XP_017169731.1
chromobox protein homolog 1 isoform X1
NM_007622.4
NP_031648.1
chromobox protein homolog 1 isoform 1
LOC697437
XP_001088037.1
Homo sapiens (human)
CBX1
NP_006798.1
Canis lupus familiaris (dog)
CBX1
XP_548171.1
Bos taurus (cattle)
CBX1
NP_001193344.1
Mus musculus (house mouse)
Cbx1
NP_031648.1
Danio rerio (zebrafish)
cbx1b
NP_001002090.1
Pan troglodytes (chimpanzee)
CBX1
NP_001239487.1
Gallus gallus (chicken)
CBX1
NP_989663.1
Danio rerio (zebrafish)
cbx1a
NP_956040.1
Bos taurus (cattle)
LOC101904753
XP_005210243.1
Rattus norvegicus (Norway rat)
Cbx1
XP_006247297.1
Drosophila melanogaster (fruit fly)
HP1b
NP_001162713.1
Anopheles gambiae (African malaria mosquito)
AgaP_AGAP004723
XP_318105.4
Xenopus tropicalis (tropical clawed frog)
cbx1
NP_001017150.1
Related articles in PubMed
An efficient method for generation of bi-allelic null mutant mouse embryonic stem cells and its application for investigating epigenetic modifiers.
Fisher CL, Marks H, Cho LT, Andrews R, Wormald S, Carroll T, Iyer V, Tate P, Rosen B, Stunnenberg HG, Fisher AG, Skarnes WC Nucleic acids research45(21)e174(2017 Dec)
A staging system for correct phenotype interpretation of mouse embryos harvested on embryonic day 14 (E14.5).
Geyer SH, Reissig L, Rose J, Wilson R, Prin F, Szumska D, Ramirez-Solis R, Tudor C, White J, Mohun TJ, Weninger WJ Journal of anatomy230(5)710-719(2017 May)
A human interactome in three quantitative dimensions organized by stoichiometries and abundances.
Hein MY, Hubner NC, Poser I, Cox J, Nagaraj N, Toyoda Y, Gak IA, Weisswange I, Mansfeld J, Buchholz F, Hyman AA, Mann M Cell163(3)712-23(2015 Oct)
Heterochromatin Protein 1? (HP1?) has distinct functions and distinct nuclear distribution in pluripotent versus differentiated cells.
Mattout A, Aaronson Y, Sailaja BS, Raghu Ram EV, Harikumar A, Mallm JP, Sim KH, Nissim-Rafinia M, Supper E, Singh PB, Sze SK, Gasser SM, Rippe K, Meshorer E Genome biology16213(2015 Sep)
GeneRIFs: Gene References Into Functions What's a GeneRIF?
The following Cbx1 gene cDNA ORF clone sequences were retrieved from the NCBI Reference Sequence Database (RefSeq). These sequences represent the protein coding region of the Cbx1 cDNA ORF which is encoded by the open reading frame (ORF) sequence. ORF sequences can be delivered in our standard vector, pcDNA3.1+ /C-(K)DYK or the vector of your choice as an expression/transfection-ready ORF clone. Not the clone you want? Click here to find your clone.
CloneID
OMu21812
Clone ID Related Accession (Same CDS sequence)
NM_001362563.1
, XM_017314242.1
, XM_011248704.2
, XM_006532100.2
, NM_001362560.1
, NM_001362561.1
, NM_007622.3
, XM_006532099.2
, XM_017314242.2
, NM_007622.4
Accession Version
NM_001362563.1 Latest version!
Documents for ORF clone product in default vector
Sequence Information
ORF Nucleotide Sequence (Length: 558bp)
Protein sequence
SNP
Vector
pcDNA3.1+ /C-(K)DYK or customized vector
User Manual
Clone information
Clone Map
MSDS
Tag on pcDNA3.1+ /C-(K)DYK
C terminal DYKDDDDK tags
ORF Insert Method
CloneEZ™ Seamless cloning technology
Insert Structure
linear
Update Date
2019-12-30
Organism
Mus musculus(house mouse)
Product
chromobox protein homolog 1 isoform 1
Comment
Comment: VALIDATED REFSEQ: This record has undergone validation or preliminary review. The reference sequence was derived from AL596384.17. On Apr 20, 2018 this sequence version replaced XM_006532100.2.
Sequence Note: The RefSeq transcript and protein were derived from genomic sequence to make the sequence consistent with the reference genome assembly. The genomic coordinates used for the transcript record were based on alignments.
Publication Note: This RefSeq record includes a subset of the publications that are available for this gene. Please see the Gene record to access additional publications.
##Evidence-Data-START##
Transcript exon combination :: CF584370.1 [ECO:0000332]
RNAseq introns :: single sample supports all introns SAMN00849374, SAMN00849375 [ECO:0000348]
##Evidence-Data-END##
1 61 121 181 241 301 361 421 481 541 ATGGGGAAAA AGCAAAACAA GAAGAAAGTG GAGGAGGTAC TAGAAGAAGA GGAAGAGGAA TATGTGGTGG AAAAAGTTCT TGATCGGCGA GTTGTCAAGG GCAAGGTGGA ATATCTTCTA AAGTGGAAGG GTTTCTCAGA TGAGGACAAC ACTTGGGAGC CAGAAGAGAA TCTGGATTGC CCTGACCTTA TTGCTGAGTT TCTACAGTCA CAGAAAACAG CTCATGAGAC AGATAAGTCA GAGGGAGGCA AGCGCAAAGC TGATTCTGAT TCTGAAGATA AAGGAGAGGA AAGCAAACCA AAGAAGAAGA AAGAAGAGTC AGAAAAGCCA CGAGGCTTTG CCCGGGGTTT GGAGCCAGAG CGGATTATTG GAGCTACTGA CTCCAGTGGA GAGCTCATGT TCCTGATGAA ATGGAAAAAC TCTGATGAGG CTGACCTGGT CCCTGCCAAG GAAGCCAATG TCAAGTGCCC ACAGGTTGTC ATATCCTTCT ATGAGGAAAG GCTAACGTGG CATTCCTACC CCTCAGAGGA TGATGACAAA AAAGACGACA AGAATTAG
The stop codons will be deleted if pcDNA3.1+ /C-(K)DYK vector is selected.
RefSeq
NP_001349492.1
CDS 257..814
Translation
Target ORF information:
RefSeq Version NM_001362563.1
Organism Mus musculus(house mouse)
Definition Mus musculus chromobox 1 (Cbx1), transcript variant 4, mRNA.
Target ORF information:
Epitope DYKDDDDK
Bacterial selection AMPR
Mammalian selection NeoR
Vector pcDNA3.1+ /C-(K)DYK
NM_001362563.1
ORF Insert Sequence:
1 61 121 181 241 301 361 421 481 541 ATGGGGAAAA AGCAAAACAA GAAGAAAGTG GAGGAGGTAC TAGAAGAAGA GGAAGAGGAA TATGTGGTGG AAAAAGTTCT TGATCGGCGA GTTGTCAAGG GCAAGGTGGA ATATCTTCTA AAGTGGAAGG GTTTCTCAGA TGAGGACAAC ACTTGGGAGC CAGAAGAGAA TCTGGATTGC CCTGACCTTA TTGCTGAGTT TCTACAGTCA CAGAAAACAG CTCATGAGAC AGATAAGTCA GAGGGAGGCA AGCGCAAAGC TGATTCTGAT TCTGAAGATA AAGGAGAGGA AAGCAAACCA AAGAAGAAGA AAGAAGAGTC AGAAAAGCCA CGAGGCTTTG CCCGGGGTTT GGAGCCAGAG CGGATTATTG GAGCTACTGA CTCCAGTGGA GAGCTCATGT TCCTGATGAA ATGGAAAAAC TCTGATGAGG CTGACCTGGT CCCTGCCAAG GAAGCCAATG TCAAGTGCCC ACAGGTTGTC ATATCCTTCT ATGAGGAAAG GCTAACGTGG CATTCCTACC CCTCAGAGGA TGATGACAAA AAAGACGACA AGAATTAG
The stop codons will be deleted if pcDNA3.1+ /C-(K)DYK vector is selected.
CloneID
OMu21812
Clone ID Related Accession (Same CDS sequence)
NM_001362563.1
, XM_017314242.1
, XM_011248704.2
, XM_006532100.2
, NM_001362560.1
, NM_001362561.1
, NM_007622.3
, XM_006532099.2
, XM_017314242.2
, NM_007622.4
Accession Version
NM_001362560.1 Latest version!
Documents for ORF clone product in default vector
Sequence Information
ORF Nucleotide Sequence (Length: 558bp)
Protein sequence
SNP
Vector
pcDNA3.1+ /C-(K)DYK or customized vector
User Manual
Clone information
Clone Map
MSDS
Tag on pcDNA3.1+ /C-(K)DYK
C terminal DYKDDDDK tags
ORF Insert Method
CloneEZ™ Seamless cloning technology
Insert Structure
linear
Update Date
2019-12-29
Organism
Mus musculus(house mouse)
Product
chromobox protein homolog 1 isoform 1
Comment
Comment: VALIDATED REFSEQ: This record has undergone validation or preliminary review. The reference sequence was derived from AL596384.17. On Apr 20, 2018 this sequence version replaced XM_006532099.2.
Sequence Note: The RefSeq transcript and protein were derived from genomic sequence to make the sequence consistent with the reference genome assembly. The genomic coordinates used for the transcript record were based on alignments.
Publication Note: This RefSeq record includes a subset of the publications that are available for this gene. Please see the Gene record to access additional publications.
##Evidence-Data-START##
Transcript exon combination :: BQ900128.1, BI853404.1 [ECO:0000332]
RNAseq introns :: single sample supports all introns SAMN00849374, SAMN00849375 [ECO:0000348]
##Evidence-Data-END##
1 61 121 181 241 301 361 421 481 541 ATGGGGAAAA AGCAAAACAA GAAGAAAGTG GAGGAGGTAC TAGAAGAAGA GGAAGAGGAA TATGTGGTGG AAAAAGTTCT TGATCGGCGA GTTGTCAAGG GCAAGGTGGA ATATCTTCTA AAGTGGAAGG GTTTCTCAGA TGAGGACAAC ACTTGGGAGC CAGAAGAGAA TCTGGATTGC CCTGACCTTA TTGCTGAGTT TCTACAGTCA CAGAAAACAG CTCATGAGAC AGATAAGTCA GAGGGAGGCA AGCGCAAAGC TGATTCTGAT TCTGAAGATA AAGGAGAGGA AAGCAAACCA AAGAAGAAGA AAGAAGAGTC AGAAAAGCCA CGAGGCTTTG CCCGGGGTTT GGAGCCAGAG CGGATTATTG GAGCTACTGA CTCCAGTGGA GAGCTCATGT TCCTGATGAA ATGGAAAAAC TCTGATGAGG CTGACCTGGT CCCTGCCAAG GAAGCCAATG TCAAGTGCCC ACAGGTTGTC ATATCCTTCT ATGAGGAAAG GCTAACGTGG CATTCCTACC CCTCAGAGGA TGATGACAAA AAAGACGACA AGAATTAG
The stop codons will be deleted if pcDNA3.1+ /C-(K)DYK vector is selected.
RefSeq
NP_001349489.1
CDS 257..814
Translation
Target ORF information:
RefSeq Version NM_001362560.1
Organism Mus musculus(house mouse)
Definition Mus musculus chromobox 1 (Cbx1), transcript variant 2, mRNA.
Target ORF information:
Epitope DYKDDDDK
Bacterial selection AMPR
Mammalian selection NeoR
Vector pcDNA3.1+ /C-(K)DYK
NM_001362560.1
ORF Insert Sequence:
1 61 121 181 241 301 361 421 481 541 ATGGGGAAAA AGCAAAACAA GAAGAAAGTG GAGGAGGTAC TAGAAGAAGA GGAAGAGGAA TATGTGGTGG AAAAAGTTCT TGATCGGCGA GTTGTCAAGG GCAAGGTGGA ATATCTTCTA AAGTGGAAGG GTTTCTCAGA TGAGGACAAC ACTTGGGAGC CAGAAGAGAA TCTGGATTGC CCTGACCTTA TTGCTGAGTT TCTACAGTCA CAGAAAACAG CTCATGAGAC AGATAAGTCA GAGGGAGGCA AGCGCAAAGC TGATTCTGAT TCTGAAGATA AAGGAGAGGA AAGCAAACCA AAGAAGAAGA AAGAAGAGTC AGAAAAGCCA CGAGGCTTTG CCCGGGGTTT GGAGCCAGAG CGGATTATTG GAGCTACTGA CTCCAGTGGA GAGCTCATGT TCCTGATGAA ATGGAAAAAC TCTGATGAGG CTGACCTGGT CCCTGCCAAG GAAGCCAATG TCAAGTGCCC ACAGGTTGTC ATATCCTTCT ATGAGGAAAG GCTAACGTGG CATTCCTACC CCTCAGAGGA TGATGACAAA AAAGACGACA AGAATTAG
The stop codons will be deleted if pcDNA3.1+ /C-(K)DYK vector is selected.
CloneID
OMu21812
Clone ID Related Accession (Same CDS sequence)
NM_001362563.1
, XM_017314242.1
, XM_011248704.2
, XM_006532100.2
, NM_001362560.1
, NM_001362561.1
, NM_007622.3
, XM_006532099.2
, XM_017314242.2
, NM_007622.4
Accession Version
NM_001362561.1 Latest version!
Documents for ORF clone product in default vector
Sequence Information
ORF Nucleotide Sequence (Length: 558bp)
Protein sequence
SNP
Vector
pcDNA3.1+ /C-(K)DYK or customized vector
User Manual
Clone information
Clone Map
MSDS
Tag on pcDNA3.1+ /C-(K)DYK
C terminal DYKDDDDK tags
ORF Insert Method
CloneEZ™ Seamless cloning technology
Insert Structure
linear
Update Date
2019-12-30
Organism
Mus musculus(house mouse)
Product
chromobox protein homolog 1 isoform 1
Comment
Comment: VALIDATED REFSEQ: This record has undergone validation or preliminary review. The reference sequence was derived from AL596384.17. On Apr 20, 2018 this sequence version replaced XM_011248704.2.
Sequence Note: The RefSeq transcript and protein were derived from genomic sequence to make the sequence consistent with the reference genome assembly. The genomic coordinates used for the transcript record were based on alignments.
Publication Note: This RefSeq record includes a subset of the publications that are available for this gene. Please see the Gene record to access additional publications.
##Evidence-Data-START##
Transcript exon combination :: BU511269.1 [ECO:0000332]
RNAseq introns :: single sample supports all introns SAMN00849374, SAMN00849375 [ECO:0000348]
##Evidence-Data-END##
1 61 121 181 241 301 361 421 481 541 ATGGGGAAAA AGCAAAACAA GAAGAAAGTG GAGGAGGTAC TAGAAGAAGA GGAAGAGGAA TATGTGGTGG AAAAAGTTCT TGATCGGCGA GTTGTCAAGG GCAAGGTGGA ATATCTTCTA AAGTGGAAGG GTTTCTCAGA TGAGGACAAC ACTTGGGAGC CAGAAGAGAA TCTGGATTGC CCTGACCTTA TTGCTGAGTT TCTACAGTCA CAGAAAACAG CTCATGAGAC AGATAAGTCA GAGGGAGGCA AGCGCAAAGC TGATTCTGAT TCTGAAGATA AAGGAGAGGA AAGCAAACCA AAGAAGAAGA AAGAAGAGTC AGAAAAGCCA CGAGGCTTTG CCCGGGGTTT GGAGCCAGAG CGGATTATTG GAGCTACTGA CTCCAGTGGA GAGCTCATGT TCCTGATGAA ATGGAAAAAC TCTGATGAGG CTGACCTGGT CCCTGCCAAG GAAGCCAATG TCAAGTGCCC ACAGGTTGTC ATATCCTTCT ATGAGGAAAG GCTAACGTGG CATTCCTACC CCTCAGAGGA TGATGACAAA AAAGACGACA AGAATTAG
The stop codons will be deleted if pcDNA3.1+ /C-(K)DYK vector is selected.
RefSeq
NP_001349490.1
CDS 257..814
Translation
Target ORF information:
RefSeq Version NM_001362561.1
Organism Mus musculus(house mouse)
Definition Mus musculus chromobox 1 (Cbx1), transcript variant 3, mRNA.
Target ORF information:
Epitope DYKDDDDK
Bacterial selection AMPR
Mammalian selection NeoR
Vector pcDNA3.1+ /C-(K)DYK
NM_001362561.1
ORF Insert Sequence:
1 61 121 181 241 301 361 421 481 541 ATGGGGAAAA AGCAAAACAA GAAGAAAGTG GAGGAGGTAC TAGAAGAAGA GGAAGAGGAA TATGTGGTGG AAAAAGTTCT TGATCGGCGA GTTGTCAAGG GCAAGGTGGA ATATCTTCTA AAGTGGAAGG GTTTCTCAGA TGAGGACAAC ACTTGGGAGC CAGAAGAGAA TCTGGATTGC CCTGACCTTA TTGCTGAGTT TCTACAGTCA CAGAAAACAG CTCATGAGAC AGATAAGTCA GAGGGAGGCA AGCGCAAAGC TGATTCTGAT TCTGAAGATA AAGGAGAGGA AAGCAAACCA AAGAAGAAGA AAGAAGAGTC AGAAAAGCCA CGAGGCTTTG CCCGGGGTTT GGAGCCAGAG CGGATTATTG GAGCTACTGA CTCCAGTGGA GAGCTCATGT TCCTGATGAA ATGGAAAAAC TCTGATGAGG CTGACCTGGT CCCTGCCAAG GAAGCCAATG TCAAGTGCCC ACAGGTTGTC ATATCCTTCT ATGAGGAAAG GCTAACGTGG CATTCCTACC CCTCAGAGGA TGATGACAAA AAAGACGACA AGAATTAG
The stop codons will be deleted if pcDNA3.1+ /C-(K)DYK vector is selected.
CloneID
OMu21812
Clone ID Related Accession (Same CDS sequence)
NM_001362563.1
, XM_017314242.1
, XM_011248704.2
, XM_006532100.2
, NM_001362560.1
, NM_001362561.1
, NM_007622.3
, XM_006532099.2
, XM_017314242.2
, NM_007622.4
Accession Version
NM_007622.3
Documents for ORF clone product in default vector
Sequence Information
ORF Nucleotide Sequence (Length: 558bp)
Protein sequence
SNP
Vector
pcDNA3.1+ /C-(K)DYK or customized vector
User Manual
Clone information
Clone Map
MSDS
Tag on pcDNA3.1+ /C-(K)DYK
C terminal DYKDDDDK tags
ORF Insert Method
CloneEZ™ Seamless cloning technology
Insert Structure
linear
Update Date
2017-12-26
Organism
Mus musculus(house mouse)
Product
chromobox protein homolog 1
Comment
Comment: VALIDATED REFSEQ: This record has undergone validation or preliminary review. The reference sequence was derived from AL596384.17 and AK014215.1. On Nov 8, 2006 this sequence version replaced NM_007622.2.
Publication Note: This RefSeq record includes a subset of the publications that are available for this gene. Please see the Gene record to access additional publications.
##Evidence-Data-START##
Transcript exon combination :: AK014215.1 [ECO:0000332]
RNAseq introns :: single sample supports all introns SAMN00849374, SAMN00849375 [ECO:0000348]
##Evidence-Data-END##
1 61 121 181 241 301 361 421 481 541 ATGGGGAAAA AGCAAAACAA GAAGAAAGTG GAGGAGGTAC TAGAAGAAGA GGAAGAGGAA TATGTGGTGG AAAAAGTTCT TGATCGGCGA GTTGTCAAGG GCAAGGTGGA ATATCTTCTA AAGTGGAAGG GTTTCTCAGA TGAGGACAAC ACTTGGGAGC CAGAAGAGAA TCTGGATTGC CCTGACCTTA TTGCTGAGTT TCTACAGTCA CAGAAAACAG CTCATGAGAC AGATAAGTCA GAGGGAGGCA AGCGCAAAGC TGATTCTGAT TCTGAAGATA AAGGAGAGGA AAGCAAACCA AAGAAGAAGA AAGAAGAGTC AGAAAAGCCA CGAGGCTTTG CCCGGGGTTT GGAGCCAGAG CGGATTATTG GAGCTACTGA CTCCAGTGGA GAGCTCATGT TCCTGATGAA ATGGAAAAAC TCTGATGAGG CTGACCTGGT CCCTGCCAAG GAAGCCAATG TCAAGTGCCC ACAGGTTGTC ATATCCTTCT ATGAGGAAAG GCTAACGTGG CATTCCTACC CCTCAGAGGA TGATGACAAA AAAGACGACA AGAATTAG
The stop codons will be deleted if pcDNA3.1+ /C-(K)DYK vector is selected.
RefSeq
NP_031648.1
CDS 256..813
Translation
Target ORF information:
RefSeq Version NM_007622.3
Organism Mus musculus(house mouse)
Definition Mus musculus chromobox 1 (Cbx1), mRNA.
Target ORF information:
Epitope DYKDDDDK
Bacterial selection AMPR
Mammalian selection NeoR
Vector pcDNA3.1+ /C-(K)DYK
NM_007622.3
ORF Insert Sequence:
1 61 121 181 241 301 361 421 481 541 ATGGGGAAAA AGCAAAACAA GAAGAAAGTG GAGGAGGTAC TAGAAGAAGA GGAAGAGGAA TATGTGGTGG AAAAAGTTCT TGATCGGCGA GTTGTCAAGG GCAAGGTGGA ATATCTTCTA AAGTGGAAGG GTTTCTCAGA TGAGGACAAC ACTTGGGAGC CAGAAGAGAA TCTGGATTGC CCTGACCTTA TTGCTGAGTT TCTACAGTCA CAGAAAACAG CTCATGAGAC AGATAAGTCA GAGGGAGGCA AGCGCAAAGC TGATTCTGAT TCTGAAGATA AAGGAGAGGA AAGCAAACCA AAGAAGAAGA AAGAAGAGTC AGAAAAGCCA CGAGGCTTTG CCCGGGGTTT GGAGCCAGAG CGGATTATTG GAGCTACTGA CTCCAGTGGA GAGCTCATGT TCCTGATGAA ATGGAAAAAC TCTGATGAGG CTGACCTGGT CCCTGCCAAG GAAGCCAATG TCAAGTGCCC ACAGGTTGTC ATATCCTTCT ATGAGGAAAG GCTAACGTGG CATTCCTACC CCTCAGAGGA TGATGACAAA AAAGACGACA AGAATTAG
The stop codons will be deleted if pcDNA3.1+ /C-(K)DYK vector is selected.
CloneID
OMu21812
Clone ID Related Accession (Same CDS sequence)
NM_001362563.1
, XM_017314242.1
, XM_011248704.2
, XM_006532100.2
, NM_001362560.1
, NM_001362561.1
, NM_007622.3
, XM_006532099.2
, XM_017314242.2
, NM_007622.4
Accession Version
NM_007622.4 Latest version!
Documents for ORF clone product in default vector
Sequence Information
ORF Nucleotide Sequence (Length: 558bp)
Protein sequence
SNP
Vector
pcDNA3.1+ /C-(K)DYK or customized vector
User Manual
Clone information
Clone Map
MSDS
Tag on pcDNA3.1+ /C-(K)DYK
C terminal DYKDDDDK tags
ORF Insert Method
CloneEZ™ Seamless cloning technology
Insert Structure
linear
Update Date
2019-12-30
Organism
Mus musculus(house mouse)
Product
chromobox protein homolog 1 isoform 1
Comment
Comment: VALIDATED REFSEQ: This record has undergone validation or preliminary review. The reference sequence was derived from AL596384.17 and AK014215.1. On Apr 20, 2018 this sequence version replaced NM_007622.3.
Sequence Note: This RefSeq record was created from transcript and genomic sequence data to make the sequence consistent with the reference genome assembly. The genomic coordinates used for the transcript record were based on transcript alignments.
Publication Note: This RefSeq record includes a subset of the publications that are available for this gene. Please see the Gene record to access additional publications.
##Evidence-Data-START##
Transcript exon combination :: AK014215.1 [ECO:0000332]
RNAseq introns :: single sample supports all introns SAMN00849374, SAMN00849375 [ECO:0000348]
##Evidence-Data-END##
1 61 121 181 241 301 361 421 481 541 ATGGGGAAAA AGCAAAACAA GAAGAAAGTG GAGGAGGTAC TAGAAGAAGA GGAAGAGGAA TATGTGGTGG AAAAAGTTCT TGATCGGCGA GTTGTCAAGG GCAAGGTGGA ATATCTTCTA AAGTGGAAGG GTTTCTCAGA TGAGGACAAC ACTTGGGAGC CAGAAGAGAA TCTGGATTGC CCTGACCTTA TTGCTGAGTT TCTACAGTCA CAGAAAACAG CTCATGAGAC AGATAAGTCA GAGGGAGGCA AGCGCAAAGC TGATTCTGAT TCTGAAGATA AAGGAGAGGA AAGCAAACCA AAGAAGAAGA AAGAAGAGTC AGAAAAGCCA CGAGGCTTTG CCCGGGGTTT GGAGCCAGAG CGGATTATTG GAGCTACTGA CTCCAGTGGA GAGCTCATGT TCCTGATGAA ATGGAAAAAC TCTGATGAGG CTGACCTGGT CCCTGCCAAG GAAGCCAATG TCAAGTGCCC ACAGGTTGTC ATATCCTTCT ATGAGGAAAG GCTAACGTGG CATTCCTACC CCTCAGAGGA TGATGACAAA AAAGACGACA AGAATTAG
The stop codons will be deleted if pcDNA3.1+ /C-(K)DYK vector is selected.
RefSeq
NP_031648.1
CDS 257..814
Translation
Target ORF information:
RefSeq Version NM_007622.4
Organism Mus musculus(house mouse)
Definition Mus musculus chromobox 1 (Cbx1), transcript variant 1, mRNA.
Target ORF information:
Epitope DYKDDDDK
Bacterial selection AMPR
Mammalian selection NeoR
Vector pcDNA3.1+ /C-(K)DYK
NM_007622.4
ORF Insert Sequence:
1 61 121 181 241 301 361 421 481 541 ATGGGGAAAA AGCAAAACAA GAAGAAAGTG GAGGAGGTAC TAGAAGAAGA GGAAGAGGAA TATGTGGTGG AAAAAGTTCT TGATCGGCGA GTTGTCAAGG GCAAGGTGGA ATATCTTCTA AAGTGGAAGG GTTTCTCAGA TGAGGACAAC ACTTGGGAGC CAGAAGAGAA TCTGGATTGC CCTGACCTTA TTGCTGAGTT TCTACAGTCA CAGAAAACAG CTCATGAGAC AGATAAGTCA GAGGGAGGCA AGCGCAAAGC TGATTCTGAT TCTGAAGATA AAGGAGAGGA AAGCAAACCA AAGAAGAAGA AAGAAGAGTC AGAAAAGCCA CGAGGCTTTG CCCGGGGTTT GGAGCCAGAG CGGATTATTG GAGCTACTGA CTCCAGTGGA GAGCTCATGT TCCTGATGAA ATGGAAAAAC TCTGATGAGG CTGACCTGGT CCCTGCCAAG GAAGCCAATG TCAAGTGCCC ACAGGTTGTC ATATCCTTCT ATGAGGAAAG GCTAACGTGG CATTCCTACC CCTCAGAGGA TGATGACAAA AAAGACGACA AGAATTAG
The stop codons will be deleted if pcDNA3.1+ /C-(K)DYK vector is selected.
CloneID
OMu67329
Clone ID Related Accession (Same CDS sequence)
NM_001362564.1
Accession Version
NM_001362564.1 Latest version!
Documents for ORF clone product in default vector
Sequence Information
ORF Nucleotide Sequence (Length: 453bp)
Protein sequence
SNP
Vector
pcDNA3.1+ /C-(K)DYK or customized vector
User Manual
Clone information
Clone Map
MSDS
Tag on pcDNA3.1+ /C-(K)DYK
C terminal DYKDDDDK tags
ORF Insert Method
CloneEZ™ Seamless cloning technology
Insert Structure
linear
Update Date
2019-12-30
Organism
Mus musculus(house mouse)
Product
chromobox protein homolog 1 isoform 2
Comment
Comment: VALIDATED REFSEQ: This record has undergone validation or preliminary review. The reference sequence was derived from AL596384.17 and AK017608.1.
Sequence Note: This RefSeq record was created from transcript and genomic sequence data to make the sequence consistent with the reference genome assembly. The genomic coordinates used for the transcript record were based on transcript alignments.
Publication Note: This RefSeq record includes a subset of the publications that are available for this gene. Please see the Gene record to access additional publications.
##Evidence-Data-START##
Transcript exon combination :: AK017608.1 [ECO:0000332]
RNAseq introns :: single sample supports all introns SAMN00849374, SAMN00849380 [ECO:0000348]
##Evidence-Data-END##
1 61 121 181 241 301 361 421 ATGGGGAAAA AGCAAAACAA GAAGAAAGTG GAGGAGGTAC TAGAAGAAGA GGAAGAGGAA TATGTGGTGG AAAAAGTTCT TGATCGGCGA GTTGTCAAGG GCAAGGTGGA ATATCTTCTA AAGTGGAAGG GTTTCTCAGA TGAGGACAAC ACTTGGGAGC CAGAAGAGAA TCTGGATTGC CCTGACCTTA TTGCTGAGTT TCTACAGTCA CAGAAAACAG CTCATGAGAC AGATAAGTCA GAGGGAGGCA AGCGCAAAGC TGATTCTGAT TCTGAAGATA AAGGAGAGGA AAGCAAACCA AAGAAGAAGA AAGAAGAGTC AGAAAAGCCA CGAGGCTTTG CCCGGGGTTT GGAGCCAGAG CGGATTATTG GAGCTACTGA CTCCAGTGGA GAGCTCATGT TCCTGATGAA ATGGTCTTCT TCCCGTGTTG CCCAGTCTGG CCTAGAACTT TGA
The stop codons will be deleted if pcDNA3.1+ /C-(K)DYK vector is selected.
RefSeq
NP_001349493.1
CDS 257..709
Translation
Target ORF information:
RefSeq Version NM_001362564.1
Organism Mus musculus(house mouse)
Definition Mus musculus chromobox 1 (Cbx1), transcript variant 5, mRNA.
Target ORF information:
Epitope DYKDDDDK
Bacterial selection AMPR
Mammalian selection NeoR
Vector pcDNA3.1+ /C-(K)DYK
NM_001362564.1
ORF Insert Sequence:
1 61 121 181 241 301 361 421 ATGGGGAAAA AGCAAAACAA GAAGAAAGTG GAGGAGGTAC TAGAAGAAGA GGAAGAGGAA TATGTGGTGG AAAAAGTTCT TGATCGGCGA GTTGTCAAGG GCAAGGTGGA ATATCTTCTA AAGTGGAAGG GTTTCTCAGA TGAGGACAAC ACTTGGGAGC CAGAAGAGAA TCTGGATTGC CCTGACCTTA TTGCTGAGTT TCTACAGTCA CAGAAAACAG CTCATGAGAC AGATAAGTCA GAGGGAGGCA AGCGCAAAGC TGATTCTGAT TCTGAAGATA AAGGAGAGGA AAGCAAACCA AAGAAGAAGA AAGAAGAGTC AGAAAAGCCA CGAGGCTTTG CCCGGGGTTT GGAGCCAGAG CGGATTATTG GAGCTACTGA CTCCAGTGGA GAGCTCATGT TCCTGATGAA ATGGTCTTCT TCCCGTGTTG CCCAGTCTGG CCTAGAACTT TGA
The stop codons will be deleted if pcDNA3.1+ /C-(K)DYK vector is selected.
CloneID
OMu21812
Clone ID Related Accession (Same CDS sequence)
NM_001362563.1
, XM_017314242.1
, XM_011248704.2
, XM_006532100.2
, NM_001362560.1
, NM_001362561.1
, NM_007622.3
, XM_006532099.2
, XM_017314242.2
, NM_007622.4
Accession Version
XM_017314242.1
Documents for ORF clone product in default vector
Sequence Information
ORF Nucleotide Sequence (Length: 558bp)
Protein sequence
SNP
Vector
pcDNA3.1+ /C-(K)DYK or customized vector
User Manual
Clone information
Clone Map
MSDS
Tag on pcDNA3.1+ /C-(K)DYK
C terminal DYKDDDDK tags
ORF Insert Method
CloneEZ™ Seamless cloning technology
Insert Structure
linear
Update Date
2016-06-21
Organism
Mus musculus(house mouse)
Product
chromobox protein homolog 1 isoform X1
Comment
Comment: MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NC_000077.6) annotated using gene prediction method: Gnomon, supported by mRNA and EST evidence. Also see: Documentation of NCBI's Annotation Process
##Genome-Annotation-Data-START##
Annotation Provider :: NCBI
Annotation Status :: Full annotation
Annotation Version :: Mus musculus Annotation Release 106
Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline
Annotation Software Version :: 7.1
Annotation Method :: Best-placed RefSeq; Gnomon
Features Annotated :: Gene; mRNA; CDS; ncRNA
##Genome-Annotation-Data-END##
1 61 121 181 241 301 361 421 481 541 ATGGGGAAAA AGCAAAACAA GAAGAAAGTG GAGGAGGTAC TAGAAGAAGA GGAAGAGGAA TATGTGGTGG AAAAAGTTCT TGATCGGCGA GTTGTCAAGG GCAAGGTGGA ATATCTTCTA AAGTGGAAGG GTTTCTCAGA TGAGGACAAC ACTTGGGAGC CAGAAGAGAA TCTGGATTGC CCTGACCTTA TTGCTGAGTT TCTACAGTCA CAGAAAACAG CTCATGAGAC AGATAAGTCA GAGGGAGGCA AGCGCAAAGC TGATTCTGAT TCTGAAGATA AAGGAGAGGA AAGCAAACCA AAGAAGAAGA AAGAAGAGTC AGAAAAGCCA CGAGGCTTTG CCCGGGGTTT GGAGCCAGAG CGGATTATTG GAGCTACTGA CTCCAGTGGA GAGCTCATGT TCCTGATGAA ATGGAAAAAC TCTGATGAGG CTGACCTGGT CCCTGCCAAG GAAGCCAATG TCAAGTGCCC ACAGGTTGTC ATATCCTTCT ATGAGGAAAG GCTAACGTGG CATTCCTACC CCTCAGAGGA TGATGACAAA AAAGACGACA AGAATTAG
The stop codons will be deleted if pcDNA3.1+ /C-(K)DYK vector is selected.
RefSeq
XP_017169731.1
CDS 713..1270
Translation
Target ORF information:
RefSeq Version XM_017314242.1
Organism Mus musculus(house mouse)
Definition Mus musculus chromobox 1 (Cbx1), transcript variant X3, mRNA.
Target ORF information:
Epitope DYKDDDDK
Bacterial selection AMPR
Mammalian selection NeoR
Vector pcDNA3.1+ /C-(K)DYK
XM_017314242.1
ORF Insert Sequence:
1 61 121 181 241 301 361 421 481 541 ATGGGGAAAA AGCAAAACAA GAAGAAAGTG GAGGAGGTAC TAGAAGAAGA GGAAGAGGAA TATGTGGTGG AAAAAGTTCT TGATCGGCGA GTTGTCAAGG GCAAGGTGGA ATATCTTCTA AAGTGGAAGG GTTTCTCAGA TGAGGACAAC ACTTGGGAGC CAGAAGAGAA TCTGGATTGC CCTGACCTTA TTGCTGAGTT TCTACAGTCA CAGAAAACAG CTCATGAGAC AGATAAGTCA GAGGGAGGCA AGCGCAAAGC TGATTCTGAT TCTGAAGATA AAGGAGAGGA AAGCAAACCA AAGAAGAAGA AAGAAGAGTC AGAAAAGCCA CGAGGCTTTG CCCGGGGTTT GGAGCCAGAG CGGATTATTG GAGCTACTGA CTCCAGTGGA GAGCTCATGT TCCTGATGAA ATGGAAAAAC TCTGATGAGG CTGACCTGGT CCCTGCCAAG GAAGCCAATG TCAAGTGCCC ACAGGTTGTC ATATCCTTCT ATGAGGAAAG GCTAACGTGG CATTCCTACC CCTCAGAGGA TGATGACAAA AAAGACGACA AGAATTAG
The stop codons will be deleted if pcDNA3.1+ /C-(K)DYK vector is selected.
CloneID
OMu21812
Clone ID Related Accession (Same CDS sequence)
NM_001362563.1
, XM_017314242.1
, XM_011248704.2
, XM_006532100.2
, NM_001362560.1
, NM_001362561.1
, NM_007622.3
, XM_006532099.2
, XM_017314242.2
, NM_007622.4
Accession Version
XM_011248704.2 Latest version!
Documents for ORF clone product in default vector
Sequence Information
ORF Nucleotide Sequence (Length: 558bp)
Protein sequence
SNP
Vector
pcDNA3.1+ /C-(K)DYK or customized vector
User Manual
Clone information
Clone Map
MSDS
Tag on pcDNA3.1+ /C-(K)DYK
C terminal DYKDDDDK tags
ORF Insert Method
CloneEZ™ Seamless cloning technology
Insert Structure
linear
Update Date
2016-06-21
Organism
Mus musculus(house mouse)
Product
chromobox protein homolog 1 isoform X1
Comment
Comment: MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NC_000077.6) annotated using gene prediction method: Gnomon, supported by mRNA and EST evidence. Also see: Documentation of NCBI's Annotation Process
On Jun 22, 2016 this sequence version replaced XM_011248704.1.
##Genome-Annotation-Data-START##
Annotation Provider :: NCBI
Annotation Status :: Full annotation
Annotation Version :: Mus musculus Annotation Release 106
Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline
Annotation Software Version :: 7.1
Annotation Method :: Best-placed RefSeq; Gnomon
Features Annotated :: Gene; mRNA; CDS; ncRNA
##Genome-Annotation-Data-END##
1 61 121 181 241 301 361 421 481 541 ATGGGGAAAA AGCAAAACAA GAAGAAAGTG GAGGAGGTAC TAGAAGAAGA GGAAGAGGAA TATGTGGTGG AAAAAGTTCT TGATCGGCGA GTTGTCAAGG GCAAGGTGGA ATATCTTCTA AAGTGGAAGG GTTTCTCAGA TGAGGACAAC ACTTGGGAGC CAGAAGAGAA TCTGGATTGC CCTGACCTTA TTGCTGAGTT TCTACAGTCA CAGAAAACAG CTCATGAGAC AGATAAGTCA GAGGGAGGCA AGCGCAAAGC TGATTCTGAT TCTGAAGATA AAGGAGAGGA AAGCAAACCA AAGAAGAAGA AAGAAGAGTC AGAAAAGCCA CGAGGCTTTG CCCGGGGTTT GGAGCCAGAG CGGATTATTG GAGCTACTGA CTCCAGTGGA GAGCTCATGT TCCTGATGAA ATGGAAAAAC TCTGATGAGG CTGACCTGGT CCCTGCCAAG GAAGCCAATG TCAAGTGCCC ACAGGTTGTC ATATCCTTCT ATGAGGAAAG GCTAACGTGG CATTCCTACC CCTCAGAGGA TGATGACAAA AAAGACGACA AGAATTAG
The stop codons will be deleted if pcDNA3.1+ /C-(K)DYK vector is selected.
RefSeq
XP_011247006.1
CDS 713..1270
Translation
Target ORF information:
RefSeq Version XM_011248704.2
Organism Mus musculus(house mouse)
Definition Mus musculus chromobox 1 (Cbx1), transcript variant X2, mRNA.
Target ORF information:
Epitope DYKDDDDK
Bacterial selection AMPR
Mammalian selection NeoR
Vector pcDNA3.1+ /C-(K)DYK
XM_011248704.2
ORF Insert Sequence:
1 61 121 181 241 301 361 421 481 541 ATGGGGAAAA AGCAAAACAA GAAGAAAGTG GAGGAGGTAC TAGAAGAAGA GGAAGAGGAA TATGTGGTGG AAAAAGTTCT TGATCGGCGA GTTGTCAAGG GCAAGGTGGA ATATCTTCTA AAGTGGAAGG GTTTCTCAGA TGAGGACAAC ACTTGGGAGC CAGAAGAGAA TCTGGATTGC CCTGACCTTA TTGCTGAGTT TCTACAGTCA CAGAAAACAG CTCATGAGAC AGATAAGTCA GAGGGAGGCA AGCGCAAAGC TGATTCTGAT TCTGAAGATA AAGGAGAGGA AAGCAAACCA AAGAAGAAGA AAGAAGAGTC AGAAAAGCCA CGAGGCTTTG CCCGGGGTTT GGAGCCAGAG CGGATTATTG GAGCTACTGA CTCCAGTGGA GAGCTCATGT TCCTGATGAA ATGGAAAAAC TCTGATGAGG CTGACCTGGT CCCTGCCAAG GAAGCCAATG TCAAGTGCCC ACAGGTTGTC ATATCCTTCT ATGAGGAAAG GCTAACGTGG CATTCCTACC CCTCAGAGGA TGATGACAAA AAAGACGACA AGAATTAG
The stop codons will be deleted if pcDNA3.1+ /C-(K)DYK vector is selected.
CloneID
OMu21812
Clone ID Related Accession (Same CDS sequence)
NM_001362563.1
, XM_017314242.1
, XM_011248704.2
, XM_006532100.2
, NM_001362560.1
, NM_001362561.1
, NM_007622.3
, XM_006532099.2
, XM_017314242.2
, NM_007622.4
Accession Version
XM_006532100.2 Latest version!
Documents for ORF clone product in default vector
Sequence Information
ORF Nucleotide Sequence (Length: 558bp)
Protein sequence
SNP
Vector
pcDNA3.1+ /C-(K)DYK or customized vector
User Manual
Clone information
Clone Map
MSDS
Tag on pcDNA3.1+ /C-(K)DYK
C terminal DYKDDDDK tags
ORF Insert Method
CloneEZ™ Seamless cloning technology
Insert Structure
linear
Update Date
2016-06-21
Organism
Mus musculus(house mouse)
Product
chromobox protein homolog 1 isoform X1
Comment
Comment: MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NC_000077.6) annotated using gene prediction method: Gnomon, supported by mRNA and EST evidence. Also see: Documentation of NCBI's Annotation Process
On Jun 22, 2016 this sequence version replaced XM_006532100.1.
##Genome-Annotation-Data-START##
Annotation Provider :: NCBI
Annotation Status :: Full annotation
Annotation Version :: Mus musculus Annotation Release 106
Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline
Annotation Software Version :: 7.1
Annotation Method :: Best-placed RefSeq; Gnomon
Features Annotated :: Gene; mRNA; CDS; ncRNA
##Genome-Annotation-Data-END##
1 61 121 181 241 301 361 421 481 541 ATGGGGAAAA AGCAAAACAA GAAGAAAGTG GAGGAGGTAC TAGAAGAAGA GGAAGAGGAA TATGTGGTGG AAAAAGTTCT TGATCGGCGA GTTGTCAAGG GCAAGGTGGA ATATCTTCTA AAGTGGAAGG GTTTCTCAGA TGAGGACAAC ACTTGGGAGC CAGAAGAGAA TCTGGATTGC CCTGACCTTA TTGCTGAGTT TCTACAGTCA CAGAAAACAG CTCATGAGAC AGATAAGTCA GAGGGAGGCA AGCGCAAAGC TGATTCTGAT TCTGAAGATA AAGGAGAGGA AAGCAAACCA AAGAAGAAGA AAGAAGAGTC AGAAAAGCCA CGAGGCTTTG CCCGGGGTTT GGAGCCAGAG CGGATTATTG GAGCTACTGA CTCCAGTGGA GAGCTCATGT TCCTGATGAA ATGGAAAAAC TCTGATGAGG CTGACCTGGT CCCTGCCAAG GAAGCCAATG TCAAGTGCCC ACAGGTTGTC ATATCCTTCT ATGAGGAAAG GCTAACGTGG CATTCCTACC CCTCAGAGGA TGATGACAAA AAAGACGACA AGAATTAG
The stop codons will be deleted if pcDNA3.1+ /C-(K)DYK vector is selected.
RefSeq
XP_006532163.1
CDS 713..1270
Translation
Target ORF information:
RefSeq Version XM_006532100.2
Organism Mus musculus(house mouse)
Definition Mus musculus chromobox 1 (Cbx1), transcript variant X4, mRNA.
Target ORF information:
Epitope DYKDDDDK
Bacterial selection AMPR
Mammalian selection NeoR
Vector pcDNA3.1+ /C-(K)DYK
XM_006532100.2
ORF Insert Sequence:
1 61 121 181 241 301 361 421 481 541 ATGGGGAAAA AGCAAAACAA GAAGAAAGTG GAGGAGGTAC TAGAAGAAGA GGAAGAGGAA TATGTGGTGG AAAAAGTTCT TGATCGGCGA GTTGTCAAGG GCAAGGTGGA ATATCTTCTA AAGTGGAAGG GTTTCTCAGA TGAGGACAAC ACTTGGGAGC CAGAAGAGAA TCTGGATTGC CCTGACCTTA TTGCTGAGTT TCTACAGTCA CAGAAAACAG CTCATGAGAC AGATAAGTCA GAGGGAGGCA AGCGCAAAGC TGATTCTGAT TCTGAAGATA AAGGAGAGGA AAGCAAACCA AAGAAGAAGA AAGAAGAGTC AGAAAAGCCA CGAGGCTTTG CCCGGGGTTT GGAGCCAGAG CGGATTATTG GAGCTACTGA CTCCAGTGGA GAGCTCATGT TCCTGATGAA ATGGAAAAAC TCTGATGAGG CTGACCTGGT CCCTGCCAAG GAAGCCAATG TCAAGTGCCC ACAGGTTGTC ATATCCTTCT ATGAGGAAAG GCTAACGTGG CATTCCTACC CCTCAGAGGA TGATGACAAA AAAGACGACA AGAATTAG
The stop codons will be deleted if pcDNA3.1+ /C-(K)DYK vector is selected.
CloneID
OMu21812
Clone ID Related Accession (Same CDS sequence)
NM_001362563.1
, XM_017314242.1
, XM_011248704.2
, XM_006532100.2
, NM_001362560.1
, NM_001362561.1
, NM_007622.3
, XM_006532099.2
, XM_017314242.2
, NM_007622.4
Accession Version
XM_006532099.2 Latest version!
Documents for ORF clone product in default vector
Sequence Information
ORF Nucleotide Sequence (Length: 558bp)
Protein sequence
SNP
Vector
pcDNA3.1+ /C-(K)DYK or customized vector
User Manual
Clone information
Clone Map
MSDS
Tag on pcDNA3.1+ /C-(K)DYK
C terminal DYKDDDDK tags
ORF Insert Method
CloneEZ™ Seamless cloning technology
Insert Structure
linear
Update Date
2016-06-21
Organism
Mus musculus(house mouse)
Product
chromobox protein homolog 1 isoform X1
Comment
Comment: MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NC_000077.6) annotated using gene prediction method: Gnomon, supported by mRNA and EST evidence. Also see: Documentation of NCBI's Annotation Process
On Feb 9, 2015 this sequence version replaced XM_006532099.1.
##Genome-Annotation-Data-START##
Annotation Provider :: NCBI
Annotation Status :: Full annotation
Annotation Version :: Mus musculus Annotation Release 106
Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline
Annotation Software Version :: 7.1
Annotation Method :: Best-placed RefSeq; Gnomon
Features Annotated :: Gene; mRNA; CDS; ncRNA
##Genome-Annotation-Data-END##
1 61 121 181 241 301 361 421 481 541 ATGGGGAAAA AGCAAAACAA GAAGAAAGTG GAGGAGGTAC TAGAAGAAGA GGAAGAGGAA TATGTGGTGG AAAAAGTTCT TGATCGGCGA GTTGTCAAGG GCAAGGTGGA ATATCTTCTA AAGTGGAAGG GTTTCTCAGA TGAGGACAAC ACTTGGGAGC CAGAAGAGAA TCTGGATTGC CCTGACCTTA TTGCTGAGTT TCTACAGTCA CAGAAAACAG CTCATGAGAC AGATAAGTCA GAGGGAGGCA AGCGCAAAGC TGATTCTGAT TCTGAAGATA AAGGAGAGGA AAGCAAACCA AAGAAGAAGA AAGAAGAGTC AGAAAAGCCA CGAGGCTTTG CCCGGGGTTT GGAGCCAGAG CGGATTATTG GAGCTACTGA CTCCAGTGGA GAGCTCATGT TCCTGATGAA ATGGAAAAAC TCTGATGAGG CTGACCTGGT CCCTGCCAAG GAAGCCAATG TCAAGTGCCC ACAGGTTGTC ATATCCTTCT ATGAGGAAAG GCTAACGTGG CATTCCTACC CCTCAGAGGA TGATGACAAA AAAGACGACA AGAATTAG
The stop codons will be deleted if pcDNA3.1+ /C-(K)DYK vector is selected.
RefSeq
XP_006532162.1
CDS 713..1270
Translation
Target ORF information:
RefSeq Version XM_006532099.2
Organism Mus musculus(house mouse)
Definition Mus musculus chromobox 1 (Cbx1), transcript variant X1, mRNA.
Target ORF information:
Epitope DYKDDDDK
Bacterial selection AMPR
Mammalian selection NeoR
Vector pcDNA3.1+ /C-(K)DYK
XM_006532099.2
ORF Insert Sequence:
1 61 121 181 241 301 361 421 481 541 ATGGGGAAAA AGCAAAACAA GAAGAAAGTG GAGGAGGTAC TAGAAGAAGA GGAAGAGGAA TATGTGGTGG AAAAAGTTCT TGATCGGCGA GTTGTCAAGG GCAAGGTGGA ATATCTTCTA AAGTGGAAGG GTTTCTCAGA TGAGGACAAC ACTTGGGAGC CAGAAGAGAA TCTGGATTGC CCTGACCTTA TTGCTGAGTT TCTACAGTCA CAGAAAACAG CTCATGAGAC AGATAAGTCA GAGGGAGGCA AGCGCAAAGC TGATTCTGAT TCTGAAGATA AAGGAGAGGA AAGCAAACCA AAGAAGAAGA AAGAAGAGTC AGAAAAGCCA CGAGGCTTTG CCCGGGGTTT GGAGCCAGAG CGGATTATTG GAGCTACTGA CTCCAGTGGA GAGCTCATGT TCCTGATGAA ATGGAAAAAC TCTGATGAGG CTGACCTGGT CCCTGCCAAG GAAGCCAATG TCAAGTGCCC ACAGGTTGTC ATATCCTTCT ATGAGGAAAG GCTAACGTGG CATTCCTACC CCTCAGAGGA TGATGACAAA AAAGACGACA AGAATTAG
The stop codons will be deleted if pcDNA3.1+ /C-(K)DYK vector is selected.
CloneID
OMu45494
Clone ID Related Accession (Same CDS sequence)
XM_006532102.2
, XM_006532102.3
Accession Version
XM_006532102.2
Documents for ORF clone product in default vector
Sequence Information
ORF Nucleotide Sequence (Length: 426bp)
Protein sequence
SNP
Vector
pcDNA3.1+ /C-(K)DYK or customized vector
User Manual
Clone information
Clone Map
MSDS
Tag on pcDNA3.1+ /C-(K)DYK
C terminal DYKDDDDK tags
ORF Insert Method
CloneEZ™ Seamless cloning technology
Insert Structure
linear
Update Date
2016-06-21
Organism
Mus musculus(house mouse)
Product
chromobox protein homolog 1 isoform X2
Comment
Comment: MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NC_000077.6) annotated using gene prediction method: Gnomon, supported by mRNA and EST evidence. Also see: Documentation of NCBI's Annotation Process
On Jun 22, 2016 this sequence version replaced XM_006532102.1.
##Genome-Annotation-Data-START##
Annotation Provider :: NCBI
Annotation Status :: Full annotation
Annotation Version :: Mus musculus Annotation Release 106
Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline
Annotation Software Version :: 7.1
Annotation Method :: Best-placed RefSeq; Gnomon
Features Annotated :: Gene; mRNA; CDS; ncRNA
##Genome-Annotation-Data-END##
1 61 121 181 241 301 361 421 ATGGGGAAAA AGCAAAACAA GAAGAAAGTG GAGGAGGTAC TAGAAGAAGA GGAAGAGGAA TATGTGGTGG AAAAAGTTCT TGATCGGCGA GTTGTCAAGG GCAAGGTGGA ATATCTTCTA AAGTGGAAGG GTTTCTCAGA TGAGGACAAC ACTTGGGAGC CAGAAGAGAA TCTGGATTGC CCTGACCTTA TTGCTGAGTT TCTACAGTCA CAGAAAACAG CTCATGAGAC AGATAAGTCA GAGGGAGGCA AGCGCAAAGC TGATTCTGAT TCTGAAGATA AAGGAGAGGA AAGCAAACCA AAGAAGAAGA AAGAAGAGTC AGAAAAGCCA CGAGGCTTTG CCCGGGGTTT GGAGCCAGAG CGGATTATTG GAGCTACTGA CTCCAGTGGA GAGCTCATGT TCCTGATGAA ATGCTTTGAA CCCTGA
The stop codons will be deleted if pcDNA3.1+ /C-(K)DYK vector is selected.
RefSeq
XP_006532165.1
CDS 713..1138
Translation
Target ORF information:
RefSeq Version XM_006532102.2
Organism Mus musculus(house mouse)
Definition Mus musculus chromobox 1 (Cbx1), transcript variant X5, mRNA.
Target ORF information:
Epitope DYKDDDDK
Bacterial selection AMPR
Mammalian selection NeoR
Vector pcDNA3.1+ /C-(K)DYK
XM_006532102.2
ORF Insert Sequence:
1 61 121 181 241 301 361 421 ATGGGGAAAA AGCAAAACAA GAAGAAAGTG GAGGAGGTAC TAGAAGAAGA GGAAGAGGAA TATGTGGTGG AAAAAGTTCT TGATCGGCGA GTTGTCAAGG GCAAGGTGGA ATATCTTCTA AAGTGGAAGG GTTTCTCAGA TGAGGACAAC ACTTGGGAGC CAGAAGAGAA TCTGGATTGC CCTGACCTTA TTGCTGAGTT TCTACAGTCA CAGAAAACAG CTCATGAGAC AGATAAGTCA GAGGGAGGCA AGCGCAAAGC TGATTCTGAT TCTGAAGATA AAGGAGAGGA AAGCAAACCA AAGAAGAAGA AAGAAGAGTC AGAAAAGCCA CGAGGCTTTG CCCGGGGTTT GGAGCCAGAG CGGATTATTG GAGCTACTGA CTCCAGTGGA GAGCTCATGT TCCTGATGAA ATGCTTTGAA CCCTGA
The stop codons will be deleted if pcDNA3.1+ /C-(K)DYK vector is selected.
CloneID
OMu21812
Clone ID Related Accession (Same CDS sequence)
NM_001362563.1
, XM_017314242.1
, XM_011248704.2
, XM_006532100.2
, NM_001362560.1
, NM_001362561.1
, NM_007622.3
, XM_006532099.2
, XM_017314242.2
, NM_007622.4
Accession Version
XM_017314242.2 Latest version!
Documents for ORF clone product in default vector
Sequence Information
ORF Nucleotide Sequence (Length: 558bp)
Protein sequence
SNP
Vector
pcDNA3.1+ /C-(K)DYK or customized vector
User Manual
Clone information
Clone Map
MSDS
Tag on pcDNA3.1+ /C-(K)DYK
C terminal DYKDDDDK tags
ORF Insert Method
CloneEZ™ Seamless cloning technology
Insert Structure
linear
Update Date
2019-08-07
Organism
Mus musculus(house mouse)
Product
chromobox protein homolog 1 isoform X1
Comment
Comment: MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NC_000077.6) annotated using gene prediction method: Gnomon, supported by mRNA and EST evidence. Also see: Documentation of NCBI's Annotation Process
On Aug 8, 2019 this sequence version replaced XM_017314242.1.
##Genome-Annotation-Data-START##
Annotation Provider :: NCBI
Annotation Status :: Full annotation
Annotation Name :: Mus musculus Annotation Release 108
Annotation Version :: 108
Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline
Annotation Software Version :: 8.2
Annotation Method :: Best-placed RefSeq; Gnomon
Features Annotated :: Gene; mRNA; CDS; ncRNA
##Genome-Annotation-Data-END##
1 61 121 181 241 301 361 421 481 541 ATGGGGAAAA AGCAAAACAA GAAGAAAGTG GAGGAGGTAC TAGAAGAAGA GGAAGAGGAA TATGTGGTGG AAAAAGTTCT TGATCGGCGA GTTGTCAAGG GCAAGGTGGA ATATCTTCTA AAGTGGAAGG GTTTCTCAGA TGAGGACAAC ACTTGGGAGC CAGAAGAGAA TCTGGATTGC CCTGACCTTA TTGCTGAGTT TCTACAGTCA CAGAAAACAG CTCATGAGAC AGATAAGTCA GAGGGAGGCA AGCGCAAAGC TGATTCTGAT TCTGAAGATA AAGGAGAGGA AAGCAAACCA AAGAAGAAGA AAGAAGAGTC AGAAAAGCCA CGAGGCTTTG CCCGGGGTTT GGAGCCAGAG CGGATTATTG GAGCTACTGA CTCCAGTGGA GAGCTCATGT TCCTGATGAA ATGGAAAAAC TCTGATGAGG CTGACCTGGT CCCTGCCAAG GAAGCCAATG TCAAGTGCCC ACAGGTTGTC ATATCCTTCT ATGAGGAAAG GCTAACGTGG CATTCCTACC CCTCAGAGGA TGATGACAAA AAAGACGACA AGAATTAG
The stop codons will be deleted if pcDNA3.1+ /C-(K)DYK vector is selected.
RefSeq
XP_017169731.1
CDS 712..1269
Translation
Target ORF information:
RefSeq Version XM_017314242.2
Organism Mus musculus(house mouse)
Definition Mus musculus chromobox 1 (Cbx1), transcript variant X1, mRNA.
Target ORF information:
Epitope DYKDDDDK
Bacterial selection AMPR
Mammalian selection NeoR
Vector pcDNA3.1+ /C-(K)DYK
XM_017314242.2
ORF Insert Sequence:
1 61 121 181 241 301 361 421 481 541 ATGGGGAAAA AGCAAAACAA GAAGAAAGTG GAGGAGGTAC TAGAAGAAGA GGAAGAGGAA TATGTGGTGG AAAAAGTTCT TGATCGGCGA GTTGTCAAGG GCAAGGTGGA ATATCTTCTA AAGTGGAAGG GTTTCTCAGA TGAGGACAAC ACTTGGGAGC CAGAAGAGAA TCTGGATTGC CCTGACCTTA TTGCTGAGTT TCTACAGTCA CAGAAAACAG CTCATGAGAC AGATAAGTCA GAGGGAGGCA AGCGCAAAGC TGATTCTGAT TCTGAAGATA AAGGAGAGGA AAGCAAACCA AAGAAGAAGA AAGAAGAGTC AGAAAAGCCA CGAGGCTTTG CCCGGGGTTT GGAGCCAGAG CGGATTATTG GAGCTACTGA CTCCAGTGGA GAGCTCATGT TCCTGATGAA ATGGAAAAAC TCTGATGAGG CTGACCTGGT CCCTGCCAAG GAAGCCAATG TCAAGTGCCC ACAGGTTGTC ATATCCTTCT ATGAGGAAAG GCTAACGTGG CATTCCTACC CCTCAGAGGA TGATGACAAA AAAGACGACA AGAATTAG
The stop codons will be deleted if pcDNA3.1+ /C-(K)DYK vector is selected.
CloneID
OMu45494
Clone ID Related Accession (Same CDS sequence)
XM_006532102.2
, XM_006532102.3
Accession Version
XM_006532102.3 Latest version!
Documents for ORF clone product in default vector
Sequence Information
ORF Nucleotide Sequence (Length: 426bp)
Protein sequence
SNP
Vector
pcDNA3.1+ /C-(K)DYK or customized vector
User Manual
Clone information
Clone Map
MSDS
Tag on pcDNA3.1+ /C-(K)DYK
C terminal DYKDDDDK tags
ORF Insert Method
CloneEZ™ Seamless cloning technology
Insert Structure
linear
Update Date
2019-08-07
Organism
Mus musculus(house mouse)
Product
chromobox protein homolog 1 isoform X2
Comment
Comment: MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NC_000077.6) annotated using gene prediction method: Gnomon, supported by mRNA and EST evidence. Also see: Documentation of NCBI's Annotation Process
On Aug 8, 2019 this sequence version replaced XM_006532102.2.
##Genome-Annotation-Data-START##
Annotation Provider :: NCBI
Annotation Status :: Full annotation
Annotation Name :: Mus musculus Annotation Release 108
Annotation Version :: 108
Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline
Annotation Software Version :: 8.2
Annotation Method :: Best-placed RefSeq; Gnomon
Features Annotated :: Gene; mRNA; CDS; ncRNA
##Genome-Annotation-Data-END##
1 61 121 181 241 301 361 421 ATGGGGAAAA AGCAAAACAA GAAGAAAGTG GAGGAGGTAC TAGAAGAAGA GGAAGAGGAA TATGTGGTGG AAAAAGTTCT TGATCGGCGA GTTGTCAAGG GCAAGGTGGA ATATCTTCTA AAGTGGAAGG GTTTCTCAGA TGAGGACAAC ACTTGGGAGC CAGAAGAGAA TCTGGATTGC CCTGACCTTA TTGCTGAGTT TCTACAGTCA CAGAAAACAG CTCATGAGAC AGATAAGTCA GAGGGAGGCA AGCGCAAAGC TGATTCTGAT TCTGAAGATA AAGGAGAGGA AAGCAAACCA AAGAAGAAGA AAGAAGAGTC AGAAAAGCCA CGAGGCTTTG CCCGGGGTTT GGAGCCAGAG CGGATTATTG GAGCTACTGA CTCCAGTGGA GAGCTCATGT TCCTGATGAA ATGCTTTGAA CCCTGA
The stop codons will be deleted if pcDNA3.1+ /C-(K)DYK vector is selected.
RefSeq
XP_006532165.1
CDS 712..1137
Translation
Target ORF information:
RefSeq Version XM_006532102.3
Organism Mus musculus(house mouse)
Definition Mus musculus chromobox 1 (Cbx1), transcript variant X2, mRNA.
Target ORF information:
Epitope DYKDDDDK
Bacterial selection AMPR
Mammalian selection NeoR
Vector pcDNA3.1+ /C-(K)DYK
XM_006532102.3
ORF Insert Sequence:
1 61 121 181 241 301 361 421 ATGGGGAAAA AGCAAAACAA GAAGAAAGTG GAGGAGGTAC TAGAAGAAGA GGAAGAGGAA TATGTGGTGG AAAAAGTTCT TGATCGGCGA GTTGTCAAGG GCAAGGTGGA ATATCTTCTA AAGTGGAAGG GTTTCTCAGA TGAGGACAAC ACTTGGGAGC CAGAAGAGAA TCTGGATTGC CCTGACCTTA TTGCTGAGTT TCTACAGTCA CAGAAAACAG CTCATGAGAC AGATAAGTCA GAGGGAGGCA AGCGCAAAGC TGATTCTGAT TCTGAAGATA AAGGAGAGGA AAGCAAACCA AAGAAGAAGA AAGAAGAGTC AGAAAAGCCA CGAGGCTTTG CCCGGGGTTT GGAGCCAGAG CGGATTATTG GAGCTACTGA CTCCAGTGGA GAGCTCATGT TCCTGATGAA ATGCTTTGAA CCCTGA
The stop codons will be deleted if pcDNA3.1+ /C-(K)DYK vector is selected.
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