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Cbx1 cDNA ORF clone, Mus musculus(house mouse)

Summary

Gene Symbol Cbx1
Entrez Gene ID 12412
Full Name chromobox 1
Synonyms Cbx,Cbx-rs2,E430007M08Rik,HP1B,Hp1beta,M31,MOD1
General protein information
Preferred Names

chromobox 1

Names

chromobox protein homolog 1
HP1 beta
chromobox homolog 1
heterochromatin protein 1 homolog beta
heterochromatin protein p25
modifier 1 protein
Gene Type protein-coding
Organism Mus musculus(house mouse)
Genome

11

11 D|11 60.11 cM

Reference Sequences (RefSeq)

mRNA and Protein(s)

mRNA Protein Name
XM_006532102.2 XP_006532165.1 chromobox protein homolog 1 isoform X2
NM_001362564.1 NP_001349493.1 chromobox protein homolog 1 isoform 2
NM_001362563.1 NP_001349492.1 chromobox protein homolog 1 isoform 1
XM_017314242.1 XP_017169731.1 chromobox protein homolog 1 isoform X1
XM_011248704.2 XP_011247006.1 chromobox protein homolog 1 isoform X1
XM_006532100.2 XP_006532163.1 chromobox protein homolog 1 isoform X1
XM_006532102.3 XP_006532165.1 chromobox protein homolog 1 isoform X2
NM_001362560.1 NP_001349489.1 chromobox protein homolog 1 isoform 1
NM_001362561.1 NP_001349490.1 chromobox protein homolog 1 isoform 1
NM_007622.3 NP_031648.1 chromobox protein homolog 1
XM_006532099.2 XP_006532162.1 chromobox protein homolog 1 isoform X1
XM_017314242.2 XP_017169731.1 chromobox protein homolog 1 isoform X1
NM_007622.4 NP_031648.1 chromobox protein homolog 1 isoform 1

Pathways from BioSystems


Homologies


LOC697437 XP_001088037.1
Homo sapiens (human) CBX1 NP_006798.1
Canis lupus familiaris (dog) CBX1 XP_548171.1
Bos taurus (cattle) CBX1 NP_001193344.1
Mus musculus (house mouse) Cbx1 NP_031648.1
Danio rerio (zebrafish) cbx1b NP_001002090.1
Pan troglodytes (chimpanzee) CBX1 NP_001239487.1
Gallus gallus (chicken) CBX1 NP_989663.1
Danio rerio (zebrafish) cbx1a NP_956040.1
Bos taurus (cattle) LOC101904753 XP_005210243.1
Rattus norvegicus (Norway rat) Cbx1 XP_006247297.1
Drosophila melanogaster (fruit fly) HP1b NP_001162713.1
Anopheles gambiae (African malaria mosquito) AgaP_AGAP004723 XP_318105.4
Xenopus tropicalis (tropical clawed frog) cbx1 NP_001017150.1

Gene Ontology


Bibliography

Related articles in PubMed

An efficient method for generation of bi-allelic null mutant mouse embryonic stem cells and its application for investigating epigenetic modifiers.
Fisher CL, Marks H, Cho LT, Andrews R, Wormald S, Carroll T, Iyer V, Tate P, Rosen B, Stunnenberg HG, Fisher AG, Skarnes WC
Nucleic acids research45(21)e174(2017 Dec)

A staging system for correct phenotype interpretation of mouse embryos harvested on embryonic day 14 (E14.5).
Geyer SH, Reissig L, Rose J, Wilson R, Prin F, Szumska D, Ramirez-Solis R, Tudor C, White J, Mohun TJ, Weninger WJ
Journal of anatomy230(5)710-719(2017 May)

A human interactome in three quantitative dimensions organized by stoichiometries and abundances.
Hein MY, Hubner NC, Poser I, Cox J, Nagaraj N, Toyoda Y, Gak IA, Weisswange I, Mansfeld J, Buchholz F, Hyman AA, Mann M
Cell163(3)712-23(2015 Oct)

Heterochromatin Protein 1? (HP1?) has distinct functions and distinct nuclear distribution in pluripotent versus differentiated cells.
Mattout A, Aaronson Y, Sailaja BS, Raghu Ram EV, Harikumar A, Mallm JP, Sim KH, Nissim-Rafinia M, Supper E, Singh PB, Sze SK, Gasser SM, Rippe K, Meshorer E
Genome biology16213(2015 Sep)

GeneRIFs: Gene References Into Functions What's a GeneRIF?

The N-terminal portion of LBR is probably responsible for the binding to HP1b.
Title: Intrabody-mediated diverting of HP1? to the cytoplasm induces co-aggregation of H3-H4 histones and lamin-B receptor.

We demonstrate an unexpected duality in the role of HP1b: it is essential in ESCs for maintaining pluripotency, while it is required for proper differentiation in differentiated cells.
Title: Heterochromatin Protein 1? (HP1?) has distinct functions and distinct nuclear distribution in pluripotent versus differentiated cells.

HP1b negatively regulates MMP2 expression in a transcriptional level and prevents MMP2 activation through reducing the expression of MT1MMP.
Title: HP1? suppresses metastasis of human cancer cells by decreasing the expression and activation of MMP2.

Study concludes that only the 53BP1 status in DNA lesions, induced by UVA or gamma-rays, is affected by A-type lamin deficiency, which was not observed for heterochromatin-related proteins HP1beta and BMI1.
Title: Recruitment of HP1? to UVA-induced DNA lesions is independent of radiation-induced changes in A-type lamins.

SUV39h1 associated with HP1 beta in fibrillarin-positive nucleolar regions.
Title: SUV39h-independent association of HP1 beta with fibrillarin-positive nucleolar regions.

The following Cbx1 gene cDNA ORF clone sequences were retrieved from the NCBI Reference Sequence Database (RefSeq). These sequences represent the protein coding region of the Cbx1 cDNA ORF which is encoded by the open reading frame (ORF) sequence. ORF sequences can be delivered in our standard vector, pcDNA3.1+/C-(K)DYK or the vector of your choice as an expression/transfection-ready ORF clone. Not the clone you want? Click here to find your clone.

***CloneID Accession No. Definition **Vector *Turnaround time Price (USD) Select
OMu21812 NM_001362561.1
Latest version!		 Mus musculus chromobox 1 (Cbx1), transcript variant 3, mRNA. pcDNA3.1+/C-(K)DYK or customized vector 7-9 $69.30
$99.00
OMu21812 NM_001362560.1
Latest version!		 Mus musculus chromobox 1 (Cbx1), transcript variant 2, mRNA. pcDNA3.1+/C-(K)DYK or customized vector 7-9 $69.30
$99.00
OMu21812 NM_001362563.1
Latest version!		 Mus musculus chromobox 1 (Cbx1), transcript variant 4, mRNA. pcDNA3.1+/C-(K)DYK or customized vector 7-9 $69.30
$99.00
OMu21812 NM_007622.4
Latest version!		 Mus musculus chromobox 1 (Cbx1), transcript variant 1, mRNA. pcDNA3.1+/C-(K)DYK or customized vector 7-9 $69.30
$99.00
OMu67329 NM_001362564.1
Latest version!		 Mus musculus chromobox 1 (Cbx1), transcript variant 5, mRNA. pcDNA3.1+/C-(K)DYK or customized vector 7-9 $69.30
$99.00
OMu21812 XM_006532099.2
Latest version!		 Mus musculus chromobox 1 (Cbx1), transcript variant X1, mRNA. pcDNA3.1+/C-(K)DYK or customized vector 7-9 $69.30
$99.00
OMu21812 XM_011248704.2
Latest version!		 Mus musculus chromobox 1 (Cbx1), transcript variant X2, mRNA. pcDNA3.1+/C-(K)DYK or customized vector 7-9 $69.30
$99.00
OMu21812 XM_006532100.2
Latest version!		 Mus musculus chromobox 1 (Cbx1), transcript variant X4, mRNA. pcDNA3.1+/C-(K)DYK or customized vector 7-9 $69.30
$99.00
OMu21812 XM_017314242.2
Latest version!		 Mus musculus chromobox 1 (Cbx1), transcript variant X1, mRNA. pcDNA3.1+/C-(K)DYK or customized vector 9-11 $69.30
$99.00
OMu45494 XM_006532102.3
Latest version!		 Mus musculus chromobox 1 (Cbx1), transcript variant X2, mRNA. pcDNA3.1+/C-(K)DYK or customized vector 9-11 $69.30
$99.00
View Old Accession Versions >>
OMu45494 XM_006532102.2 Mus musculus chromobox 1 (Cbx1), transcript variant X5, mRNA. pcDNA3.1+/C-(K)DYK or customized vector 7-9 $69.30
$99.00
OMu21812 XM_017314242.1 Mus musculus chromobox 1 (Cbx1), transcript variant X3, mRNA. pcDNA3.1+/C-(K)DYK or customized vector 7-9 $69.30
$99.00
OMu21812 NM_007622.3 Mus musculus chromobox 1 (Cbx1), mRNA. pcDNA3.1+/C-(K)DYK or customized vector 7-9 $69.30
$99.00
Hide Old Accession Versions >>

ORF Online Only Promotion

Next-day Shipping ORF Clones ( in default vector with tag)
1 Clone 30% OFF
2-4 Clone 40% OFF
5 or more Clone 50% OFF
All Other ORF Clones
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*Business Day

** You may select a custom vector to replace pcDNA3.1+/C-(K)DYK after clone is added to cart.

** GenScript guarantees 100% sequence accuracy of all synthetic DNA constructs we deliver, but we do not guarantee protein expression in your experimental system. Protein expression is influenced by many factors that may vary between experiments or laboratories. In addition, please pay attention to the signal peptide, propeptide and transit peptide in target ORF, which may affect the choice of vector (N/C terminal tag vector).

***One clone ID might be correlated to multiple accession numbers, which share the same CDS sequence.

Reference Sequences (Refseq)


CloneID OMu21812
Clone ID Related Accession (Same CDS sequence) NM_001362563.1 , XM_017314242.1 , XM_011248704.2 , XM_006532100.2 , NM_001362560.1 , NM_001362561.1 , NM_007622.3 , XM_006532099.2 , XM_017314242.2 , NM_007622.4
Accession Version NM_001362563.1 Latest version! Documents for ORF clone product in default vector
Sequence Information ORF Nucleotide Sequence (Length: 558bp)
Protein sequence
SNP
Vector pcDNA3.1+/C-(K)DYK or customized vector User Manual
Clone information Clone Map MSDS
Tag on pcDNA3.1+/C-(K)DYK C terminal DYKDDDDK tags
ORF Insert Method CloneEZ™ Seamless cloning technology
Insert Structure linear
Update Date 2019-12-30
Organism Mus musculus(house mouse)
Product chromobox protein homolog 1 isoform 1
Comment Comment: VALIDATED REFSEQ: This record has undergone validation or preliminary review. The reference sequence was derived from AL596384.17. On Apr 20, 2018 this sequence version replaced XM_006532100.2. Sequence Note: The RefSeq transcript and protein were derived from genomic sequence to make the sequence consistent with the reference genome assembly. The genomic coordinates used for the transcript record were based on alignments. Publication Note: This RefSeq record includes a subset of the publications that are available for this gene. Please see the Gene record to access additional publications. ##Evidence-Data-START## Transcript exon combination :: CF584370.1 [ECO:0000332] RNAseq introns :: single sample supports all introns SAMN00849374, SAMN00849375 [ECO:0000348] ##Evidence-Data-END## 

1
61
121
181
241
301
361
421
481
541
ATGGGGAAAA AGCAAAACAA GAAGAAAGTG GAGGAGGTAC TAGAAGAAGA GGAAGAGGAA 
TATGTGGTGG AAAAAGTTCT TGATCGGCGA GTTGTCAAGG GCAAGGTGGA ATATCTTCTA 
AAGTGGAAGG GTTTCTCAGA TGAGGACAAC ACTTGGGAGC CAGAAGAGAA TCTGGATTGC 
CCTGACCTTA TTGCTGAGTT TCTACAGTCA CAGAAAACAG CTCATGAGAC AGATAAGTCA 
GAGGGAGGCA AGCGCAAAGC TGATTCTGAT TCTGAAGATA AAGGAGAGGA AAGCAAACCA 
AAGAAGAAGA AAGAAGAGTC AGAAAAGCCA CGAGGCTTTG CCCGGGGTTT GGAGCCAGAG 
CGGATTATTG GAGCTACTGA CTCCAGTGGA GAGCTCATGT TCCTGATGAA ATGGAAAAAC 
TCTGATGAGG CTGACCTGGT CCCTGCCAAG GAAGCCAATG TCAAGTGCCC ACAGGTTGTC 
ATATCCTTCT ATGAGGAAAG GCTAACGTGG CATTCCTACC CCTCAGAGGA TGATGACAAA 
AAAGACGACA AGAATTAG

The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.

RefSeq NP_001349492.1
CDS257..814
Translation

Target ORF information:

RefSeq Version NM_001362563.1
Organism Mus musculus(house mouse)
Definition Mus musculus chromobox 1 (Cbx1), transcript variant 4, mRNA.

Target ORF information:

Epitope DYKDDDDK
Bacterial selection AMPR
Mammalian selection NeoR
Vector pcDNA3.1+/C-(K)DYK
 NM_001362563.1

ORF Insert Sequence:

1
61
121
181
241
301
361
421
481
541
ATGGGGAAAA AGCAAAACAA GAAGAAAGTG GAGGAGGTAC TAGAAGAAGA GGAAGAGGAA 
TATGTGGTGG AAAAAGTTCT TGATCGGCGA GTTGTCAAGG GCAAGGTGGA ATATCTTCTA 
AAGTGGAAGG GTTTCTCAGA TGAGGACAAC ACTTGGGAGC CAGAAGAGAA TCTGGATTGC 
CCTGACCTTA TTGCTGAGTT TCTACAGTCA CAGAAAACAG CTCATGAGAC AGATAAGTCA 
GAGGGAGGCA AGCGCAAAGC TGATTCTGAT TCTGAAGATA AAGGAGAGGA AAGCAAACCA 
AAGAAGAAGA AAGAAGAGTC AGAAAAGCCA CGAGGCTTTG CCCGGGGTTT GGAGCCAGAG 
CGGATTATTG GAGCTACTGA CTCCAGTGGA GAGCTCATGT TCCTGATGAA ATGGAAAAAC 
TCTGATGAGG CTGACCTGGT CCCTGCCAAG GAAGCCAATG TCAAGTGCCC ACAGGTTGTC 
ATATCCTTCT ATGAGGAAAG GCTAACGTGG CATTCCTACC CCTCAGAGGA TGATGACAAA 
AAAGACGACA AGAATTAG

The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.

CloneID OMu21812
Clone ID Related Accession (Same CDS sequence) NM_001362563.1 , XM_017314242.1 , XM_011248704.2 , XM_006532100.2 , NM_001362560.1 , NM_001362561.1 , NM_007622.3 , XM_006532099.2 , XM_017314242.2 , NM_007622.4
Accession Version NM_001362560.1 Latest version! Documents for ORF clone product in default vector
Sequence Information ORF Nucleotide Sequence (Length: 558bp)
Protein sequence
SNP
Vector pcDNA3.1+/C-(K)DYK or customized vector User Manual
Clone information Clone Map MSDS
Tag on pcDNA3.1+/C-(K)DYK C terminal DYKDDDDK tags
ORF Insert Method CloneEZ™ Seamless cloning technology
Insert Structure linear
Update Date 2019-12-29
Organism Mus musculus(house mouse)
Product chromobox protein homolog 1 isoform 1
Comment Comment: VALIDATED REFSEQ: This record has undergone validation or preliminary review. The reference sequence was derived from AL596384.17. On Apr 20, 2018 this sequence version replaced XM_006532099.2. Sequence Note: The RefSeq transcript and protein were derived from genomic sequence to make the sequence consistent with the reference genome assembly. The genomic coordinates used for the transcript record were based on alignments. Publication Note: This RefSeq record includes a subset of the publications that are available for this gene. Please see the Gene record to access additional publications. ##Evidence-Data-START## Transcript exon combination :: BQ900128.1, BI853404.1 [ECO:0000332] RNAseq introns :: single sample supports all introns SAMN00849374, SAMN00849375 [ECO:0000348] ##Evidence-Data-END## 

1
61
121
181
241
301
361
421
481
541
ATGGGGAAAA AGCAAAACAA GAAGAAAGTG GAGGAGGTAC TAGAAGAAGA GGAAGAGGAA 
TATGTGGTGG AAAAAGTTCT TGATCGGCGA GTTGTCAAGG GCAAGGTGGA ATATCTTCTA 
AAGTGGAAGG GTTTCTCAGA TGAGGACAAC ACTTGGGAGC CAGAAGAGAA TCTGGATTGC 
CCTGACCTTA TTGCTGAGTT TCTACAGTCA CAGAAAACAG CTCATGAGAC AGATAAGTCA 
GAGGGAGGCA AGCGCAAAGC TGATTCTGAT TCTGAAGATA AAGGAGAGGA AAGCAAACCA 
AAGAAGAAGA AAGAAGAGTC AGAAAAGCCA CGAGGCTTTG CCCGGGGTTT GGAGCCAGAG 
CGGATTATTG GAGCTACTGA CTCCAGTGGA GAGCTCATGT TCCTGATGAA ATGGAAAAAC 
TCTGATGAGG CTGACCTGGT CCCTGCCAAG GAAGCCAATG TCAAGTGCCC ACAGGTTGTC 
ATATCCTTCT ATGAGGAAAG GCTAACGTGG CATTCCTACC CCTCAGAGGA TGATGACAAA 
AAAGACGACA AGAATTAG

The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.

RefSeq NP_001349489.1
CDS257..814
Translation

Target ORF information:

RefSeq Version NM_001362560.1
Organism Mus musculus(house mouse)
Definition Mus musculus chromobox 1 (Cbx1), transcript variant 2, mRNA.

Target ORF information:

Epitope DYKDDDDK
Bacterial selection AMPR
Mammalian selection NeoR
Vector pcDNA3.1+/C-(K)DYK
 NM_001362560.1

ORF Insert Sequence:

1
61
121
181
241
301
361
421
481
541
ATGGGGAAAA AGCAAAACAA GAAGAAAGTG GAGGAGGTAC TAGAAGAAGA GGAAGAGGAA 
TATGTGGTGG AAAAAGTTCT TGATCGGCGA GTTGTCAAGG GCAAGGTGGA ATATCTTCTA 
AAGTGGAAGG GTTTCTCAGA TGAGGACAAC ACTTGGGAGC CAGAAGAGAA TCTGGATTGC 
CCTGACCTTA TTGCTGAGTT TCTACAGTCA CAGAAAACAG CTCATGAGAC AGATAAGTCA 
GAGGGAGGCA AGCGCAAAGC TGATTCTGAT TCTGAAGATA AAGGAGAGGA AAGCAAACCA 
AAGAAGAAGA AAGAAGAGTC AGAAAAGCCA CGAGGCTTTG CCCGGGGTTT GGAGCCAGAG 
CGGATTATTG GAGCTACTGA CTCCAGTGGA GAGCTCATGT TCCTGATGAA ATGGAAAAAC 
TCTGATGAGG CTGACCTGGT CCCTGCCAAG GAAGCCAATG TCAAGTGCCC ACAGGTTGTC 
ATATCCTTCT ATGAGGAAAG GCTAACGTGG CATTCCTACC CCTCAGAGGA TGATGACAAA 
AAAGACGACA AGAATTAG

The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.

CloneID OMu21812
Clone ID Related Accession (Same CDS sequence) NM_001362563.1 , XM_017314242.1 , XM_011248704.2 , XM_006532100.2 , NM_001362560.1 , NM_001362561.1 , NM_007622.3 , XM_006532099.2 , XM_017314242.2 , NM_007622.4
Accession Version NM_001362561.1 Latest version! Documents for ORF clone product in default vector
Sequence Information ORF Nucleotide Sequence (Length: 558bp)
Protein sequence
SNP
Vector pcDNA3.1+/C-(K)DYK or customized vector User Manual
Clone information Clone Map MSDS
Tag on pcDNA3.1+/C-(K)DYK C terminal DYKDDDDK tags
ORF Insert Method CloneEZ™ Seamless cloning technology
Insert Structure linear
Update Date 2019-12-30
Organism Mus musculus(house mouse)
Product chromobox protein homolog 1 isoform 1
Comment Comment: VALIDATED REFSEQ: This record has undergone validation or preliminary review. The reference sequence was derived from AL596384.17. On Apr 20, 2018 this sequence version replaced XM_011248704.2. Sequence Note: The RefSeq transcript and protein were derived from genomic sequence to make the sequence consistent with the reference genome assembly. The genomic coordinates used for the transcript record were based on alignments. Publication Note: This RefSeq record includes a subset of the publications that are available for this gene. Please see the Gene record to access additional publications. ##Evidence-Data-START## Transcript exon combination :: BU511269.1 [ECO:0000332] RNAseq introns :: single sample supports all introns SAMN00849374, SAMN00849375 [ECO:0000348] ##Evidence-Data-END## 

1
61
121
181
241
301
361
421
481
541
ATGGGGAAAA AGCAAAACAA GAAGAAAGTG GAGGAGGTAC TAGAAGAAGA GGAAGAGGAA 
TATGTGGTGG AAAAAGTTCT TGATCGGCGA GTTGTCAAGG GCAAGGTGGA ATATCTTCTA 
AAGTGGAAGG GTTTCTCAGA TGAGGACAAC ACTTGGGAGC CAGAAGAGAA TCTGGATTGC 
CCTGACCTTA TTGCTGAGTT TCTACAGTCA CAGAAAACAG CTCATGAGAC AGATAAGTCA 
GAGGGAGGCA AGCGCAAAGC TGATTCTGAT TCTGAAGATA AAGGAGAGGA AAGCAAACCA 
AAGAAGAAGA AAGAAGAGTC AGAAAAGCCA CGAGGCTTTG CCCGGGGTTT GGAGCCAGAG 
CGGATTATTG GAGCTACTGA CTCCAGTGGA GAGCTCATGT TCCTGATGAA ATGGAAAAAC 
TCTGATGAGG CTGACCTGGT CCCTGCCAAG GAAGCCAATG TCAAGTGCCC ACAGGTTGTC 
ATATCCTTCT ATGAGGAAAG GCTAACGTGG CATTCCTACC CCTCAGAGGA TGATGACAAA 
AAAGACGACA AGAATTAG

The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.

RefSeq NP_001349490.1
CDS257..814
Translation

Target ORF information:

RefSeq Version NM_001362561.1
Organism Mus musculus(house mouse)
Definition Mus musculus chromobox 1 (Cbx1), transcript variant 3, mRNA.

Target ORF information:

Epitope DYKDDDDK
Bacterial selection AMPR
Mammalian selection NeoR
Vector pcDNA3.1+/C-(K)DYK
 NM_001362561.1

ORF Insert Sequence:

1
61
121
181
241
301
361
421
481
541
ATGGGGAAAA AGCAAAACAA GAAGAAAGTG GAGGAGGTAC TAGAAGAAGA GGAAGAGGAA 
TATGTGGTGG AAAAAGTTCT TGATCGGCGA GTTGTCAAGG GCAAGGTGGA ATATCTTCTA 
AAGTGGAAGG GTTTCTCAGA TGAGGACAAC ACTTGGGAGC CAGAAGAGAA TCTGGATTGC 
CCTGACCTTA TTGCTGAGTT TCTACAGTCA CAGAAAACAG CTCATGAGAC AGATAAGTCA 
GAGGGAGGCA AGCGCAAAGC TGATTCTGAT TCTGAAGATA AAGGAGAGGA AAGCAAACCA 
AAGAAGAAGA AAGAAGAGTC AGAAAAGCCA CGAGGCTTTG CCCGGGGTTT GGAGCCAGAG 
CGGATTATTG GAGCTACTGA CTCCAGTGGA GAGCTCATGT TCCTGATGAA ATGGAAAAAC 
TCTGATGAGG CTGACCTGGT CCCTGCCAAG GAAGCCAATG TCAAGTGCCC ACAGGTTGTC 
ATATCCTTCT ATGAGGAAAG GCTAACGTGG CATTCCTACC CCTCAGAGGA TGATGACAAA 
AAAGACGACA AGAATTAG

The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.

CloneID OMu21812
Clone ID Related Accession (Same CDS sequence) NM_001362563.1 , XM_017314242.1 , XM_011248704.2 , XM_006532100.2 , NM_001362560.1 , NM_001362561.1 , NM_007622.3 , XM_006532099.2 , XM_017314242.2 , NM_007622.4
Accession Version NM_007622.3 Documents for ORF clone product in default vector
Sequence Information ORF Nucleotide Sequence (Length: 558bp)
Protein sequence
SNP
Vector pcDNA3.1+/C-(K)DYK or customized vector User Manual
Clone information Clone Map MSDS
Tag on pcDNA3.1+/C-(K)DYK C terminal DYKDDDDK tags
ORF Insert Method CloneEZ™ Seamless cloning technology
Insert Structure linear
Update Date 2017-12-26
Organism Mus musculus(house mouse)
Product chromobox protein homolog 1
Comment Comment: VALIDATED REFSEQ: This record has undergone validation or preliminary review. The reference sequence was derived from AL596384.17 and AK014215.1. On Nov 8, 2006 this sequence version replaced NM_007622.2. Publication Note: This RefSeq record includes a subset of the publications that are available for this gene. Please see the Gene record to access additional publications. ##Evidence-Data-START## Transcript exon combination :: AK014215.1 [ECO:0000332] RNAseq introns :: single sample supports all introns SAMN00849374, SAMN00849375 [ECO:0000348] ##Evidence-Data-END## 

1
61
121
181
241
301
361
421
481
541
ATGGGGAAAA AGCAAAACAA GAAGAAAGTG GAGGAGGTAC TAGAAGAAGA GGAAGAGGAA 
TATGTGGTGG AAAAAGTTCT TGATCGGCGA GTTGTCAAGG GCAAGGTGGA ATATCTTCTA 
AAGTGGAAGG GTTTCTCAGA TGAGGACAAC ACTTGGGAGC CAGAAGAGAA TCTGGATTGC 
CCTGACCTTA TTGCTGAGTT TCTACAGTCA CAGAAAACAG CTCATGAGAC AGATAAGTCA 
GAGGGAGGCA AGCGCAAAGC TGATTCTGAT TCTGAAGATA AAGGAGAGGA AAGCAAACCA 
AAGAAGAAGA AAGAAGAGTC AGAAAAGCCA CGAGGCTTTG CCCGGGGTTT GGAGCCAGAG 
CGGATTATTG GAGCTACTGA CTCCAGTGGA GAGCTCATGT TCCTGATGAA ATGGAAAAAC 
TCTGATGAGG CTGACCTGGT CCCTGCCAAG GAAGCCAATG TCAAGTGCCC ACAGGTTGTC 
ATATCCTTCT ATGAGGAAAG GCTAACGTGG CATTCCTACC CCTCAGAGGA TGATGACAAA 
AAAGACGACA AGAATTAG

The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.

RefSeq NP_031648.1
CDS256..813
Translation

Target ORF information:

RefSeq Version NM_007622.3
Organism Mus musculus(house mouse)
Definition Mus musculus chromobox 1 (Cbx1), mRNA.

Target ORF information:

Epitope DYKDDDDK
Bacterial selection AMPR
Mammalian selection NeoR
Vector pcDNA3.1+/C-(K)DYK
 NM_007622.3

ORF Insert Sequence:

1
61
121
181
241
301
361
421
481
541
ATGGGGAAAA AGCAAAACAA GAAGAAAGTG GAGGAGGTAC TAGAAGAAGA GGAAGAGGAA 
TATGTGGTGG AAAAAGTTCT TGATCGGCGA GTTGTCAAGG GCAAGGTGGA ATATCTTCTA 
AAGTGGAAGG GTTTCTCAGA TGAGGACAAC ACTTGGGAGC CAGAAGAGAA TCTGGATTGC 
CCTGACCTTA TTGCTGAGTT TCTACAGTCA CAGAAAACAG CTCATGAGAC AGATAAGTCA 
GAGGGAGGCA AGCGCAAAGC TGATTCTGAT TCTGAAGATA AAGGAGAGGA AAGCAAACCA 
AAGAAGAAGA AAGAAGAGTC AGAAAAGCCA CGAGGCTTTG CCCGGGGTTT GGAGCCAGAG 
CGGATTATTG GAGCTACTGA CTCCAGTGGA GAGCTCATGT TCCTGATGAA ATGGAAAAAC 
TCTGATGAGG CTGACCTGGT CCCTGCCAAG GAAGCCAATG TCAAGTGCCC ACAGGTTGTC 
ATATCCTTCT ATGAGGAAAG GCTAACGTGG CATTCCTACC CCTCAGAGGA TGATGACAAA 
AAAGACGACA AGAATTAG

The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.

CloneID OMu21812
Clone ID Related Accession (Same CDS sequence) NM_001362563.1 , XM_017314242.1 , XM_011248704.2 , XM_006532100.2 , NM_001362560.1 , NM_001362561.1 , NM_007622.3 , XM_006532099.2 , XM_017314242.2 , NM_007622.4
Accession Version NM_007622.4 Latest version! Documents for ORF clone product in default vector
Sequence Information ORF Nucleotide Sequence (Length: 558bp)
Protein sequence
SNP
Vector pcDNA3.1+/C-(K)DYK or customized vector User Manual
Clone information Clone Map MSDS
Tag on pcDNA3.1+/C-(K)DYK C terminal DYKDDDDK tags
ORF Insert Method CloneEZ™ Seamless cloning technology
Insert Structure linear
Update Date 2019-12-30
Organism Mus musculus(house mouse)
Product chromobox protein homolog 1 isoform 1
Comment Comment: VALIDATED REFSEQ: This record has undergone validation or preliminary review. The reference sequence was derived from AL596384.17 and AK014215.1. On Apr 20, 2018 this sequence version replaced NM_007622.3. Sequence Note: This RefSeq record was created from transcript and genomic sequence data to make the sequence consistent with the reference genome assembly. The genomic coordinates used for the transcript record were based on transcript alignments. Publication Note: This RefSeq record includes a subset of the publications that are available for this gene. Please see the Gene record to access additional publications. ##Evidence-Data-START## Transcript exon combination :: AK014215.1 [ECO:0000332] RNAseq introns :: single sample supports all introns SAMN00849374, SAMN00849375 [ECO:0000348] ##Evidence-Data-END## 

1
61
121
181
241
301
361
421
481
541
ATGGGGAAAA AGCAAAACAA GAAGAAAGTG GAGGAGGTAC TAGAAGAAGA GGAAGAGGAA 
TATGTGGTGG AAAAAGTTCT TGATCGGCGA GTTGTCAAGG GCAAGGTGGA ATATCTTCTA 
AAGTGGAAGG GTTTCTCAGA TGAGGACAAC ACTTGGGAGC CAGAAGAGAA TCTGGATTGC 
CCTGACCTTA TTGCTGAGTT TCTACAGTCA CAGAAAACAG CTCATGAGAC AGATAAGTCA 
GAGGGAGGCA AGCGCAAAGC TGATTCTGAT TCTGAAGATA AAGGAGAGGA AAGCAAACCA 
AAGAAGAAGA AAGAAGAGTC AGAAAAGCCA CGAGGCTTTG CCCGGGGTTT GGAGCCAGAG 
CGGATTATTG GAGCTACTGA CTCCAGTGGA GAGCTCATGT TCCTGATGAA ATGGAAAAAC 
TCTGATGAGG CTGACCTGGT CCCTGCCAAG GAAGCCAATG TCAAGTGCCC ACAGGTTGTC 
ATATCCTTCT ATGAGGAAAG GCTAACGTGG CATTCCTACC CCTCAGAGGA TGATGACAAA 
AAAGACGACA AGAATTAG

The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.

RefSeq NP_031648.1
CDS257..814
Translation

Target ORF information:

RefSeq Version NM_007622.4
Organism Mus musculus(house mouse)
Definition Mus musculus chromobox 1 (Cbx1), transcript variant 1, mRNA.

Target ORF information:

Epitope DYKDDDDK
Bacterial selection AMPR
Mammalian selection NeoR
Vector pcDNA3.1+/C-(K)DYK
 NM_007622.4

ORF Insert Sequence:

1
61
121
181
241
301
361
421
481
541
ATGGGGAAAA AGCAAAACAA GAAGAAAGTG GAGGAGGTAC TAGAAGAAGA GGAAGAGGAA 
TATGTGGTGG AAAAAGTTCT TGATCGGCGA GTTGTCAAGG GCAAGGTGGA ATATCTTCTA 
AAGTGGAAGG GTTTCTCAGA TGAGGACAAC ACTTGGGAGC CAGAAGAGAA TCTGGATTGC 
CCTGACCTTA TTGCTGAGTT TCTACAGTCA CAGAAAACAG CTCATGAGAC AGATAAGTCA 
GAGGGAGGCA AGCGCAAAGC TGATTCTGAT TCTGAAGATA AAGGAGAGGA AAGCAAACCA 
AAGAAGAAGA AAGAAGAGTC AGAAAAGCCA CGAGGCTTTG CCCGGGGTTT GGAGCCAGAG 
CGGATTATTG GAGCTACTGA CTCCAGTGGA GAGCTCATGT TCCTGATGAA ATGGAAAAAC 
TCTGATGAGG CTGACCTGGT CCCTGCCAAG GAAGCCAATG TCAAGTGCCC ACAGGTTGTC 
ATATCCTTCT ATGAGGAAAG GCTAACGTGG CATTCCTACC CCTCAGAGGA TGATGACAAA 
AAAGACGACA AGAATTAG

The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.

CloneID OMu67329
Clone ID Related Accession (Same CDS sequence) NM_001362564.1
Accession Version NM_001362564.1 Latest version! Documents for ORF clone product in default vector
Sequence Information ORF Nucleotide Sequence (Length: 453bp)
Protein sequence
SNP
Vector pcDNA3.1+/C-(K)DYK or customized vector User Manual
Clone information Clone Map MSDS
Tag on pcDNA3.1+/C-(K)DYK C terminal DYKDDDDK tags
ORF Insert Method CloneEZ™ Seamless cloning technology
Insert Structure linear
Update Date 2019-12-30
Organism Mus musculus(house mouse)
Product chromobox protein homolog 1 isoform 2
Comment Comment: VALIDATED REFSEQ: This record has undergone validation or preliminary review. The reference sequence was derived from AL596384.17 and AK017608.1. Sequence Note: This RefSeq record was created from transcript and genomic sequence data to make the sequence consistent with the reference genome assembly. The genomic coordinates used for the transcript record were based on transcript alignments. Publication Note: This RefSeq record includes a subset of the publications that are available for this gene. Please see the Gene record to access additional publications. ##Evidence-Data-START## Transcript exon combination :: AK017608.1 [ECO:0000332] RNAseq introns :: single sample supports all introns SAMN00849374, SAMN00849380 [ECO:0000348] ##Evidence-Data-END## 

1
61
121
181
241
301
361
421
ATGGGGAAAA AGCAAAACAA GAAGAAAGTG GAGGAGGTAC TAGAAGAAGA GGAAGAGGAA 
TATGTGGTGG AAAAAGTTCT TGATCGGCGA GTTGTCAAGG GCAAGGTGGA ATATCTTCTA 
AAGTGGAAGG GTTTCTCAGA TGAGGACAAC ACTTGGGAGC CAGAAGAGAA TCTGGATTGC 
CCTGACCTTA TTGCTGAGTT TCTACAGTCA CAGAAAACAG CTCATGAGAC AGATAAGTCA 
GAGGGAGGCA AGCGCAAAGC TGATTCTGAT TCTGAAGATA AAGGAGAGGA AAGCAAACCA 
AAGAAGAAGA AAGAAGAGTC AGAAAAGCCA CGAGGCTTTG CCCGGGGTTT GGAGCCAGAG 
CGGATTATTG GAGCTACTGA CTCCAGTGGA GAGCTCATGT TCCTGATGAA ATGGTCTTCT 
TCCCGTGTTG CCCAGTCTGG CCTAGAACTT TGA

The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.

RefSeq NP_001349493.1
CDS257..709
Translation

Target ORF information:

RefSeq Version NM_001362564.1
Organism Mus musculus(house mouse)
Definition Mus musculus chromobox 1 (Cbx1), transcript variant 5, mRNA.

Target ORF information:

Epitope DYKDDDDK
Bacterial selection AMPR
Mammalian selection NeoR
Vector pcDNA3.1+/C-(K)DYK
 NM_001362564.1

ORF Insert Sequence:

1
61
121
181
241
301
361
421
ATGGGGAAAA AGCAAAACAA GAAGAAAGTG GAGGAGGTAC TAGAAGAAGA GGAAGAGGAA 
TATGTGGTGG AAAAAGTTCT TGATCGGCGA GTTGTCAAGG GCAAGGTGGA ATATCTTCTA 
AAGTGGAAGG GTTTCTCAGA TGAGGACAAC ACTTGGGAGC CAGAAGAGAA TCTGGATTGC 
CCTGACCTTA TTGCTGAGTT TCTACAGTCA CAGAAAACAG CTCATGAGAC AGATAAGTCA 
GAGGGAGGCA AGCGCAAAGC TGATTCTGAT TCTGAAGATA AAGGAGAGGA AAGCAAACCA 
AAGAAGAAGA AAGAAGAGTC AGAAAAGCCA CGAGGCTTTG CCCGGGGTTT GGAGCCAGAG 
CGGATTATTG GAGCTACTGA CTCCAGTGGA GAGCTCATGT TCCTGATGAA ATGGTCTTCT 
TCCCGTGTTG CCCAGTCTGG CCTAGAACTT TGA

The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.

CloneID OMu21812
Clone ID Related Accession (Same CDS sequence) NM_001362563.1 , XM_017314242.1 , XM_011248704.2 , XM_006532100.2 , NM_001362560.1 , NM_001362561.1 , NM_007622.3 , XM_006532099.2 , XM_017314242.2 , NM_007622.4
Accession Version XM_017314242.1 Documents for ORF clone product in default vector
Sequence Information ORF Nucleotide Sequence (Length: 558bp)
Protein sequence
SNP
Vector pcDNA3.1+/C-(K)DYK or customized vector User Manual
Clone information Clone Map MSDS
Tag on pcDNA3.1+/C-(K)DYK C terminal DYKDDDDK tags
ORF Insert Method CloneEZ™ Seamless cloning technology
Insert Structure linear
Update Date 2016-06-21
Organism Mus musculus(house mouse)
Product chromobox protein homolog 1 isoform X1
Comment Comment: MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NC_000077.6) annotated using gene prediction method: Gnomon, supported by mRNA and EST evidence. Also see: Documentation of NCBI's Annotation Process ##Genome-Annotation-Data-START## Annotation Provider :: NCBI Annotation Status :: Full annotation Annotation Version :: Mus musculus Annotation Release 106 Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline Annotation Software Version :: 7.1 Annotation Method :: Best-placed RefSeq; Gnomon Features Annotated :: Gene; mRNA; CDS; ncRNA ##Genome-Annotation-Data-END## 

1
61
121
181
241
301
361
421
481
541
ATGGGGAAAA AGCAAAACAA GAAGAAAGTG GAGGAGGTAC TAGAAGAAGA GGAAGAGGAA 
TATGTGGTGG AAAAAGTTCT TGATCGGCGA GTTGTCAAGG GCAAGGTGGA ATATCTTCTA 
AAGTGGAAGG GTTTCTCAGA TGAGGACAAC ACTTGGGAGC CAGAAGAGAA TCTGGATTGC 
CCTGACCTTA TTGCTGAGTT TCTACAGTCA CAGAAAACAG CTCATGAGAC AGATAAGTCA 
GAGGGAGGCA AGCGCAAAGC TGATTCTGAT TCTGAAGATA AAGGAGAGGA AAGCAAACCA 
AAGAAGAAGA AAGAAGAGTC AGAAAAGCCA CGAGGCTTTG CCCGGGGTTT GGAGCCAGAG 
CGGATTATTG GAGCTACTGA CTCCAGTGGA GAGCTCATGT TCCTGATGAA ATGGAAAAAC 
TCTGATGAGG CTGACCTGGT CCCTGCCAAG GAAGCCAATG TCAAGTGCCC ACAGGTTGTC 
ATATCCTTCT ATGAGGAAAG GCTAACGTGG CATTCCTACC CCTCAGAGGA TGATGACAAA 
AAAGACGACA AGAATTAG

The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.

RefSeq XP_017169731.1
CDS713..1270
Translation

Target ORF information:

RefSeq Version XM_017314242.1
Organism Mus musculus(house mouse)
Definition Mus musculus chromobox 1 (Cbx1), transcript variant X3, mRNA.

Target ORF information:

Epitope DYKDDDDK
Bacterial selection AMPR
Mammalian selection NeoR
Vector pcDNA3.1+/C-(K)DYK
 XM_017314242.1

ORF Insert Sequence:

1
61
121
181
241
301
361
421
481
541
ATGGGGAAAA AGCAAAACAA GAAGAAAGTG GAGGAGGTAC TAGAAGAAGA GGAAGAGGAA 
TATGTGGTGG AAAAAGTTCT TGATCGGCGA GTTGTCAAGG GCAAGGTGGA ATATCTTCTA 
AAGTGGAAGG GTTTCTCAGA TGAGGACAAC ACTTGGGAGC CAGAAGAGAA TCTGGATTGC 
CCTGACCTTA TTGCTGAGTT TCTACAGTCA CAGAAAACAG CTCATGAGAC AGATAAGTCA 
GAGGGAGGCA AGCGCAAAGC TGATTCTGAT TCTGAAGATA AAGGAGAGGA AAGCAAACCA 
AAGAAGAAGA AAGAAGAGTC AGAAAAGCCA CGAGGCTTTG CCCGGGGTTT GGAGCCAGAG 
CGGATTATTG GAGCTACTGA CTCCAGTGGA GAGCTCATGT TCCTGATGAA ATGGAAAAAC 
TCTGATGAGG CTGACCTGGT CCCTGCCAAG GAAGCCAATG TCAAGTGCCC ACAGGTTGTC 
ATATCCTTCT ATGAGGAAAG GCTAACGTGG CATTCCTACC CCTCAGAGGA TGATGACAAA 
AAAGACGACA AGAATTAG

The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.

CloneID OMu21812
Clone ID Related Accession (Same CDS sequence) NM_001362563.1 , XM_017314242.1 , XM_011248704.2 , XM_006532100.2 , NM_001362560.1 , NM_001362561.1 , NM_007622.3 , XM_006532099.2 , XM_017314242.2 , NM_007622.4
Accession Version XM_011248704.2 Latest version! Documents for ORF clone product in default vector
Sequence Information ORF Nucleotide Sequence (Length: 558bp)
Protein sequence
SNP
Vector pcDNA3.1+/C-(K)DYK or customized vector User Manual
Clone information Clone Map MSDS
Tag on pcDNA3.1+/C-(K)DYK C terminal DYKDDDDK tags
ORF Insert Method CloneEZ™ Seamless cloning technology
Insert Structure linear
Update Date 2016-06-21
Organism Mus musculus(house mouse)
Product chromobox protein homolog 1 isoform X1
Comment Comment: MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NC_000077.6) annotated using gene prediction method: Gnomon, supported by mRNA and EST evidence. Also see: Documentation of NCBI's Annotation Process On Jun 22, 2016 this sequence version replaced XM_011248704.1. ##Genome-Annotation-Data-START## Annotation Provider :: NCBI Annotation Status :: Full annotation Annotation Version :: Mus musculus Annotation Release 106 Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline Annotation Software Version :: 7.1 Annotation Method :: Best-placed RefSeq; Gnomon Features Annotated :: Gene; mRNA; CDS; ncRNA ##Genome-Annotation-Data-END## 

1
61
121
181
241
301
361
421
481
541
ATGGGGAAAA AGCAAAACAA GAAGAAAGTG GAGGAGGTAC TAGAAGAAGA GGAAGAGGAA 
TATGTGGTGG AAAAAGTTCT TGATCGGCGA GTTGTCAAGG GCAAGGTGGA ATATCTTCTA 
AAGTGGAAGG GTTTCTCAGA TGAGGACAAC ACTTGGGAGC CAGAAGAGAA TCTGGATTGC 
CCTGACCTTA TTGCTGAGTT TCTACAGTCA CAGAAAACAG CTCATGAGAC AGATAAGTCA 
GAGGGAGGCA AGCGCAAAGC TGATTCTGAT TCTGAAGATA AAGGAGAGGA AAGCAAACCA 
AAGAAGAAGA AAGAAGAGTC AGAAAAGCCA CGAGGCTTTG CCCGGGGTTT GGAGCCAGAG 
CGGATTATTG GAGCTACTGA CTCCAGTGGA GAGCTCATGT TCCTGATGAA ATGGAAAAAC 
TCTGATGAGG CTGACCTGGT CCCTGCCAAG GAAGCCAATG TCAAGTGCCC ACAGGTTGTC 
ATATCCTTCT ATGAGGAAAG GCTAACGTGG CATTCCTACC CCTCAGAGGA TGATGACAAA 
AAAGACGACA AGAATTAG

The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.

RefSeq XP_011247006.1
CDS713..1270
Translation

Target ORF information:

RefSeq Version XM_011248704.2
Organism Mus musculus(house mouse)
Definition Mus musculus chromobox 1 (Cbx1), transcript variant X2, mRNA.

Target ORF information:

Epitope DYKDDDDK
Bacterial selection AMPR
Mammalian selection NeoR
Vector pcDNA3.1+/C-(K)DYK
 XM_011248704.2

ORF Insert Sequence:

1
61
121
181
241
301
361
421
481
541
ATGGGGAAAA AGCAAAACAA GAAGAAAGTG GAGGAGGTAC TAGAAGAAGA GGAAGAGGAA 
TATGTGGTGG AAAAAGTTCT TGATCGGCGA GTTGTCAAGG GCAAGGTGGA ATATCTTCTA 
AAGTGGAAGG GTTTCTCAGA TGAGGACAAC ACTTGGGAGC CAGAAGAGAA TCTGGATTGC 
CCTGACCTTA TTGCTGAGTT TCTACAGTCA CAGAAAACAG CTCATGAGAC AGATAAGTCA 
GAGGGAGGCA AGCGCAAAGC TGATTCTGAT TCTGAAGATA AAGGAGAGGA AAGCAAACCA 
AAGAAGAAGA AAGAAGAGTC AGAAAAGCCA CGAGGCTTTG CCCGGGGTTT GGAGCCAGAG 
CGGATTATTG GAGCTACTGA CTCCAGTGGA GAGCTCATGT TCCTGATGAA ATGGAAAAAC 
TCTGATGAGG CTGACCTGGT CCCTGCCAAG GAAGCCAATG TCAAGTGCCC ACAGGTTGTC 
ATATCCTTCT ATGAGGAAAG GCTAACGTGG CATTCCTACC CCTCAGAGGA TGATGACAAA 
AAAGACGACA AGAATTAG

The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.

CloneID OMu21812
Clone ID Related Accession (Same CDS sequence) NM_001362563.1 , XM_017314242.1 , XM_011248704.2 , XM_006532100.2 , NM_001362560.1 , NM_001362561.1 , NM_007622.3 , XM_006532099.2 , XM_017314242.2 , NM_007622.4
Accession Version XM_006532100.2 Latest version! Documents for ORF clone product in default vector
Sequence Information ORF Nucleotide Sequence (Length: 558bp)
Protein sequence
SNP
Vector pcDNA3.1+/C-(K)DYK or customized vector User Manual
Clone information Clone Map MSDS
Tag on pcDNA3.1+/C-(K)DYK C terminal DYKDDDDK tags
ORF Insert Method CloneEZ™ Seamless cloning technology
Insert Structure linear
Update Date 2016-06-21
Organism Mus musculus(house mouse)
Product chromobox protein homolog 1 isoform X1
Comment Comment: MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NC_000077.6) annotated using gene prediction method: Gnomon, supported by mRNA and EST evidence. Also see: Documentation of NCBI's Annotation Process On Jun 22, 2016 this sequence version replaced XM_006532100.1. ##Genome-Annotation-Data-START## Annotation Provider :: NCBI Annotation Status :: Full annotation Annotation Version :: Mus musculus Annotation Release 106 Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline Annotation Software Version :: 7.1 Annotation Method :: Best-placed RefSeq; Gnomon Features Annotated :: Gene; mRNA; CDS; ncRNA ##Genome-Annotation-Data-END## 

1
61
121
181
241
301
361
421
481
541
ATGGGGAAAA AGCAAAACAA GAAGAAAGTG GAGGAGGTAC TAGAAGAAGA GGAAGAGGAA 
TATGTGGTGG AAAAAGTTCT TGATCGGCGA GTTGTCAAGG GCAAGGTGGA ATATCTTCTA 
AAGTGGAAGG GTTTCTCAGA TGAGGACAAC ACTTGGGAGC CAGAAGAGAA TCTGGATTGC 
CCTGACCTTA TTGCTGAGTT TCTACAGTCA CAGAAAACAG CTCATGAGAC AGATAAGTCA 
GAGGGAGGCA AGCGCAAAGC TGATTCTGAT TCTGAAGATA AAGGAGAGGA AAGCAAACCA 
AAGAAGAAGA AAGAAGAGTC AGAAAAGCCA CGAGGCTTTG CCCGGGGTTT GGAGCCAGAG 
CGGATTATTG GAGCTACTGA CTCCAGTGGA GAGCTCATGT TCCTGATGAA ATGGAAAAAC 
TCTGATGAGG CTGACCTGGT CCCTGCCAAG GAAGCCAATG TCAAGTGCCC ACAGGTTGTC 
ATATCCTTCT ATGAGGAAAG GCTAACGTGG CATTCCTACC CCTCAGAGGA TGATGACAAA 
AAAGACGACA AGAATTAG

The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.

RefSeq XP_006532163.1
CDS713..1270
Translation

Target ORF information:

RefSeq Version XM_006532100.2
Organism Mus musculus(house mouse)
Definition Mus musculus chromobox 1 (Cbx1), transcript variant X4, mRNA.

Target ORF information:

Epitope DYKDDDDK
Bacterial selection AMPR
Mammalian selection NeoR
Vector pcDNA3.1+/C-(K)DYK
 XM_006532100.2

ORF Insert Sequence:

1
61
121
181
241
301
361
421
481
541
ATGGGGAAAA AGCAAAACAA GAAGAAAGTG GAGGAGGTAC TAGAAGAAGA GGAAGAGGAA 
TATGTGGTGG AAAAAGTTCT TGATCGGCGA GTTGTCAAGG GCAAGGTGGA ATATCTTCTA 
AAGTGGAAGG GTTTCTCAGA TGAGGACAAC ACTTGGGAGC CAGAAGAGAA TCTGGATTGC 
CCTGACCTTA TTGCTGAGTT TCTACAGTCA CAGAAAACAG CTCATGAGAC AGATAAGTCA 
GAGGGAGGCA AGCGCAAAGC TGATTCTGAT TCTGAAGATA AAGGAGAGGA AAGCAAACCA 
AAGAAGAAGA AAGAAGAGTC AGAAAAGCCA CGAGGCTTTG CCCGGGGTTT GGAGCCAGAG 
CGGATTATTG GAGCTACTGA CTCCAGTGGA GAGCTCATGT TCCTGATGAA ATGGAAAAAC 
TCTGATGAGG CTGACCTGGT CCCTGCCAAG GAAGCCAATG TCAAGTGCCC ACAGGTTGTC 
ATATCCTTCT ATGAGGAAAG GCTAACGTGG CATTCCTACC CCTCAGAGGA TGATGACAAA 
AAAGACGACA AGAATTAG

The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.

CloneID OMu21812
Clone ID Related Accession (Same CDS sequence) NM_001362563.1 , XM_017314242.1 , XM_011248704.2 , XM_006532100.2 , NM_001362560.1 , NM_001362561.1 , NM_007622.3 , XM_006532099.2 , XM_017314242.2 , NM_007622.4
Accession Version XM_006532099.2 Latest version! Documents for ORF clone product in default vector
Sequence Information ORF Nucleotide Sequence (Length: 558bp)
Protein sequence
SNP
Vector pcDNA3.1+/C-(K)DYK or customized vector User Manual
Clone information Clone Map MSDS
Tag on pcDNA3.1+/C-(K)DYK C terminal DYKDDDDK tags
ORF Insert Method CloneEZ™ Seamless cloning technology
Insert Structure linear
Update Date 2016-06-21
Organism Mus musculus(house mouse)
Product chromobox protein homolog 1 isoform X1
Comment Comment: MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NC_000077.6) annotated using gene prediction method: Gnomon, supported by mRNA and EST evidence. Also see: Documentation of NCBI's Annotation Process On Feb 9, 2015 this sequence version replaced XM_006532099.1. ##Genome-Annotation-Data-START## Annotation Provider :: NCBI Annotation Status :: Full annotation Annotation Version :: Mus musculus Annotation Release 106 Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline Annotation Software Version :: 7.1 Annotation Method :: Best-placed RefSeq; Gnomon Features Annotated :: Gene; mRNA; CDS; ncRNA ##Genome-Annotation-Data-END## 

1
61
121
181
241
301
361
421
481
541
ATGGGGAAAA AGCAAAACAA GAAGAAAGTG GAGGAGGTAC TAGAAGAAGA GGAAGAGGAA 
TATGTGGTGG AAAAAGTTCT TGATCGGCGA GTTGTCAAGG GCAAGGTGGA ATATCTTCTA 
AAGTGGAAGG GTTTCTCAGA TGAGGACAAC ACTTGGGAGC CAGAAGAGAA TCTGGATTGC 
CCTGACCTTA TTGCTGAGTT TCTACAGTCA CAGAAAACAG CTCATGAGAC AGATAAGTCA 
GAGGGAGGCA AGCGCAAAGC TGATTCTGAT TCTGAAGATA AAGGAGAGGA AAGCAAACCA 
AAGAAGAAGA AAGAAGAGTC AGAAAAGCCA CGAGGCTTTG CCCGGGGTTT GGAGCCAGAG 
CGGATTATTG GAGCTACTGA CTCCAGTGGA GAGCTCATGT TCCTGATGAA ATGGAAAAAC 
TCTGATGAGG CTGACCTGGT CCCTGCCAAG GAAGCCAATG TCAAGTGCCC ACAGGTTGTC 
ATATCCTTCT ATGAGGAAAG GCTAACGTGG CATTCCTACC CCTCAGAGGA TGATGACAAA 
AAAGACGACA AGAATTAG

The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.

RefSeq XP_006532162.1
CDS713..1270
Translation

Target ORF information:

RefSeq Version XM_006532099.2
Organism Mus musculus(house mouse)
Definition Mus musculus chromobox 1 (Cbx1), transcript variant X1, mRNA.

Target ORF information:

Epitope DYKDDDDK
Bacterial selection AMPR
Mammalian selection NeoR
Vector pcDNA3.1+/C-(K)DYK
 XM_006532099.2

ORF Insert Sequence:

1
61
121
181
241
301
361
421
481
541
ATGGGGAAAA AGCAAAACAA GAAGAAAGTG GAGGAGGTAC TAGAAGAAGA GGAAGAGGAA 
TATGTGGTGG AAAAAGTTCT TGATCGGCGA GTTGTCAAGG GCAAGGTGGA ATATCTTCTA 
AAGTGGAAGG GTTTCTCAGA TGAGGACAAC ACTTGGGAGC CAGAAGAGAA TCTGGATTGC 
CCTGACCTTA TTGCTGAGTT TCTACAGTCA CAGAAAACAG CTCATGAGAC AGATAAGTCA 
GAGGGAGGCA AGCGCAAAGC TGATTCTGAT TCTGAAGATA AAGGAGAGGA AAGCAAACCA 
AAGAAGAAGA AAGAAGAGTC AGAAAAGCCA CGAGGCTTTG CCCGGGGTTT GGAGCCAGAG 
CGGATTATTG GAGCTACTGA CTCCAGTGGA GAGCTCATGT TCCTGATGAA ATGGAAAAAC 
TCTGATGAGG CTGACCTGGT CCCTGCCAAG GAAGCCAATG TCAAGTGCCC ACAGGTTGTC 
ATATCCTTCT ATGAGGAAAG GCTAACGTGG CATTCCTACC CCTCAGAGGA TGATGACAAA 
AAAGACGACA AGAATTAG

The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.

CloneID OMu45494
Clone ID Related Accession (Same CDS sequence) XM_006532102.2 , XM_006532102.3
Accession Version XM_006532102.2 Documents for ORF clone product in default vector
Sequence Information ORF Nucleotide Sequence (Length: 426bp)
Protein sequence
SNP
Vector pcDNA3.1+/C-(K)DYK or customized vector User Manual
Clone information Clone Map MSDS
Tag on pcDNA3.1+/C-(K)DYK C terminal DYKDDDDK tags
ORF Insert Method CloneEZ™ Seamless cloning technology
Insert Structure linear
Update Date 2016-06-21
Organism Mus musculus(house mouse)
Product chromobox protein homolog 1 isoform X2
Comment Comment: MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NC_000077.6) annotated using gene prediction method: Gnomon, supported by mRNA and EST evidence. Also see: Documentation of NCBI's Annotation Process On Jun 22, 2016 this sequence version replaced XM_006532102.1. ##Genome-Annotation-Data-START## Annotation Provider :: NCBI Annotation Status :: Full annotation Annotation Version :: Mus musculus Annotation Release 106 Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline Annotation Software Version :: 7.1 Annotation Method :: Best-placed RefSeq; Gnomon Features Annotated :: Gene; mRNA; CDS; ncRNA ##Genome-Annotation-Data-END## 

1
61
121
181
241
301
361
421
ATGGGGAAAA AGCAAAACAA GAAGAAAGTG GAGGAGGTAC TAGAAGAAGA GGAAGAGGAA 
TATGTGGTGG AAAAAGTTCT TGATCGGCGA GTTGTCAAGG GCAAGGTGGA ATATCTTCTA 
AAGTGGAAGG GTTTCTCAGA TGAGGACAAC ACTTGGGAGC CAGAAGAGAA TCTGGATTGC 
CCTGACCTTA TTGCTGAGTT TCTACAGTCA CAGAAAACAG CTCATGAGAC AGATAAGTCA 
GAGGGAGGCA AGCGCAAAGC TGATTCTGAT TCTGAAGATA AAGGAGAGGA AAGCAAACCA 
AAGAAGAAGA AAGAAGAGTC AGAAAAGCCA CGAGGCTTTG CCCGGGGTTT GGAGCCAGAG 
CGGATTATTG GAGCTACTGA CTCCAGTGGA GAGCTCATGT TCCTGATGAA ATGCTTTGAA 
CCCTGA

The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.

RefSeq XP_006532165.1
CDS713..1138
Translation

Target ORF information:

RefSeq Version XM_006532102.2
Organism Mus musculus(house mouse)
Definition Mus musculus chromobox 1 (Cbx1), transcript variant X5, mRNA.

Target ORF information:

Epitope DYKDDDDK
Bacterial selection AMPR
Mammalian selection NeoR
Vector pcDNA3.1+/C-(K)DYK
 XM_006532102.2

ORF Insert Sequence:

1
61
121
181
241
301
361
421
ATGGGGAAAA AGCAAAACAA GAAGAAAGTG GAGGAGGTAC TAGAAGAAGA GGAAGAGGAA 
TATGTGGTGG AAAAAGTTCT TGATCGGCGA GTTGTCAAGG GCAAGGTGGA ATATCTTCTA 
AAGTGGAAGG GTTTCTCAGA TGAGGACAAC ACTTGGGAGC CAGAAGAGAA TCTGGATTGC 
CCTGACCTTA TTGCTGAGTT TCTACAGTCA CAGAAAACAG CTCATGAGAC AGATAAGTCA 
GAGGGAGGCA AGCGCAAAGC TGATTCTGAT TCTGAAGATA AAGGAGAGGA AAGCAAACCA 
AAGAAGAAGA AAGAAGAGTC AGAAAAGCCA CGAGGCTTTG CCCGGGGTTT GGAGCCAGAG 
CGGATTATTG GAGCTACTGA CTCCAGTGGA GAGCTCATGT TCCTGATGAA ATGCTTTGAA 
CCCTGA

The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.

CloneID OMu21812
Clone ID Related Accession (Same CDS sequence) NM_001362563.1 , XM_017314242.1 , XM_011248704.2 , XM_006532100.2 , NM_001362560.1 , NM_001362561.1 , NM_007622.3 , XM_006532099.2 , XM_017314242.2 , NM_007622.4
Accession Version XM_017314242.2 Latest version! Documents for ORF clone product in default vector
Sequence Information ORF Nucleotide Sequence (Length: 558bp)
Protein sequence
SNP
Vector pcDNA3.1+/C-(K)DYK or customized vector User Manual
Clone information Clone Map MSDS
Tag on pcDNA3.1+/C-(K)DYK C terminal DYKDDDDK tags
ORF Insert Method CloneEZ™ Seamless cloning technology
Insert Structure linear
Update Date 2019-08-07
Organism Mus musculus(house mouse)
Product chromobox protein homolog 1 isoform X1
Comment Comment: MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NC_000077.6) annotated using gene prediction method: Gnomon, supported by mRNA and EST evidence. Also see: Documentation of NCBI's Annotation Process On Aug 8, 2019 this sequence version replaced XM_017314242.1. ##Genome-Annotation-Data-START## Annotation Provider :: NCBI Annotation Status :: Full annotation Annotation Name :: Mus musculus Annotation Release 108 Annotation Version :: 108 Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline Annotation Software Version :: 8.2 Annotation Method :: Best-placed RefSeq; Gnomon Features Annotated :: Gene; mRNA; CDS; ncRNA ##Genome-Annotation-Data-END## 

1
61
121
181
241
301
361
421
481
541
ATGGGGAAAA AGCAAAACAA GAAGAAAGTG GAGGAGGTAC TAGAAGAAGA GGAAGAGGAA 
TATGTGGTGG AAAAAGTTCT TGATCGGCGA GTTGTCAAGG GCAAGGTGGA ATATCTTCTA 
AAGTGGAAGG GTTTCTCAGA TGAGGACAAC ACTTGGGAGC CAGAAGAGAA TCTGGATTGC 
CCTGACCTTA TTGCTGAGTT TCTACAGTCA CAGAAAACAG CTCATGAGAC AGATAAGTCA 
GAGGGAGGCA AGCGCAAAGC TGATTCTGAT TCTGAAGATA AAGGAGAGGA AAGCAAACCA 
AAGAAGAAGA AAGAAGAGTC AGAAAAGCCA CGAGGCTTTG CCCGGGGTTT GGAGCCAGAG 
CGGATTATTG GAGCTACTGA CTCCAGTGGA GAGCTCATGT TCCTGATGAA ATGGAAAAAC 
TCTGATGAGG CTGACCTGGT CCCTGCCAAG GAAGCCAATG TCAAGTGCCC ACAGGTTGTC 
ATATCCTTCT ATGAGGAAAG GCTAACGTGG CATTCCTACC CCTCAGAGGA TGATGACAAA 
AAAGACGACA AGAATTAG

The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.

RefSeq XP_017169731.1
CDS712..1269
Translation

Target ORF information:

RefSeq Version XM_017314242.2
Organism Mus musculus(house mouse)
Definition Mus musculus chromobox 1 (Cbx1), transcript variant X1, mRNA.

Target ORF information:

Epitope DYKDDDDK
Bacterial selection AMPR
Mammalian selection NeoR
Vector pcDNA3.1+/C-(K)DYK
 XM_017314242.2

ORF Insert Sequence:

1
61
121
181
241
301
361
421
481
541
ATGGGGAAAA AGCAAAACAA GAAGAAAGTG GAGGAGGTAC TAGAAGAAGA GGAAGAGGAA 
TATGTGGTGG AAAAAGTTCT TGATCGGCGA GTTGTCAAGG GCAAGGTGGA ATATCTTCTA 
AAGTGGAAGG GTTTCTCAGA TGAGGACAAC ACTTGGGAGC CAGAAGAGAA TCTGGATTGC 
CCTGACCTTA TTGCTGAGTT TCTACAGTCA CAGAAAACAG CTCATGAGAC AGATAAGTCA 
GAGGGAGGCA AGCGCAAAGC TGATTCTGAT TCTGAAGATA AAGGAGAGGA AAGCAAACCA 
AAGAAGAAGA AAGAAGAGTC AGAAAAGCCA CGAGGCTTTG CCCGGGGTTT GGAGCCAGAG 
CGGATTATTG GAGCTACTGA CTCCAGTGGA GAGCTCATGT TCCTGATGAA ATGGAAAAAC 
TCTGATGAGG CTGACCTGGT CCCTGCCAAG GAAGCCAATG TCAAGTGCCC ACAGGTTGTC 
ATATCCTTCT ATGAGGAAAG GCTAACGTGG CATTCCTACC CCTCAGAGGA TGATGACAAA 
AAAGACGACA AGAATTAG

The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.

CloneID OMu45494
Clone ID Related Accession (Same CDS sequence) XM_006532102.2 , XM_006532102.3
Accession Version XM_006532102.3 Latest version! Documents for ORF clone product in default vector
Sequence Information ORF Nucleotide Sequence (Length: 426bp)
Protein sequence
SNP
Vector pcDNA3.1+/C-(K)DYK or customized vector User Manual
Clone information Clone Map MSDS
Tag on pcDNA3.1+/C-(K)DYK C terminal DYKDDDDK tags
ORF Insert Method CloneEZ™ Seamless cloning technology
Insert Structure linear
Update Date 2019-08-07
Organism Mus musculus(house mouse)
Product chromobox protein homolog 1 isoform X2
Comment Comment: MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NC_000077.6) annotated using gene prediction method: Gnomon, supported by mRNA and EST evidence. Also see: Documentation of NCBI's Annotation Process On Aug 8, 2019 this sequence version replaced XM_006532102.2. ##Genome-Annotation-Data-START## Annotation Provider :: NCBI Annotation Status :: Full annotation Annotation Name :: Mus musculus Annotation Release 108 Annotation Version :: 108 Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline Annotation Software Version :: 8.2 Annotation Method :: Best-placed RefSeq; Gnomon Features Annotated :: Gene; mRNA; CDS; ncRNA ##Genome-Annotation-Data-END## 

1
61
121
181
241
301
361
421
ATGGGGAAAA AGCAAAACAA GAAGAAAGTG GAGGAGGTAC TAGAAGAAGA GGAAGAGGAA 
TATGTGGTGG AAAAAGTTCT TGATCGGCGA GTTGTCAAGG GCAAGGTGGA ATATCTTCTA 
AAGTGGAAGG GTTTCTCAGA TGAGGACAAC ACTTGGGAGC CAGAAGAGAA TCTGGATTGC 
CCTGACCTTA TTGCTGAGTT TCTACAGTCA CAGAAAACAG CTCATGAGAC AGATAAGTCA 
GAGGGAGGCA AGCGCAAAGC TGATTCTGAT TCTGAAGATA AAGGAGAGGA AAGCAAACCA 
AAGAAGAAGA AAGAAGAGTC AGAAAAGCCA CGAGGCTTTG CCCGGGGTTT GGAGCCAGAG 
CGGATTATTG GAGCTACTGA CTCCAGTGGA GAGCTCATGT TCCTGATGAA ATGCTTTGAA 
CCCTGA

The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.

RefSeq XP_006532165.1
CDS712..1137
Translation

Target ORF information:

RefSeq Version XM_006532102.3
Organism Mus musculus(house mouse)
Definition Mus musculus chromobox 1 (Cbx1), transcript variant X2, mRNA.

Target ORF information:

Epitope DYKDDDDK
Bacterial selection AMPR
Mammalian selection NeoR
Vector pcDNA3.1+/C-(K)DYK
 XM_006532102.3

ORF Insert Sequence:

1
61
121
181
241
301
361
421
ATGGGGAAAA AGCAAAACAA GAAGAAAGTG GAGGAGGTAC TAGAAGAAGA GGAAGAGGAA 
TATGTGGTGG AAAAAGTTCT TGATCGGCGA GTTGTCAAGG GCAAGGTGGA ATATCTTCTA 
AAGTGGAAGG GTTTCTCAGA TGAGGACAAC ACTTGGGAGC CAGAAGAGAA TCTGGATTGC 
CCTGACCTTA TTGCTGAGTT TCTACAGTCA CAGAAAACAG CTCATGAGAC AGATAAGTCA 
GAGGGAGGCA AGCGCAAAGC TGATTCTGAT TCTGAAGATA AAGGAGAGGA AAGCAAACCA 
AAGAAGAAGA AAGAAGAGTC AGAAAAGCCA CGAGGCTTTG CCCGGGGTTT GGAGCCAGAG 
CGGATTATTG GAGCTACTGA CTCCAGTGGA GAGCTCATGT TCCTGATGAA ATGCTTTGAA 
CCCTGA

The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.

PubMed

book

An efficient method for generation of bi-allelic null mutant mouse embryonic stem cells and its application for investigating epigenetic modifiers.
Nucleic acids research45(21)e174(2017 Dec)
Fisher CL,Marks H,Cho LT,Andrews R,Wormald S,Carroll T,Iyer V,Tate P,Rosen B,Stunnenberg HG,Fisher AG,Skarnes WC


book

A staging system for correct phenotype interpretation of mouse embryos harvested on embryonic day 14 (E14.5).
Journal of anatomy230(5)710-719(2017 May)
Geyer SH,Reissig L,Rose J,Wilson R,Prin F,Szumska D,Ramirez-Solis R,Tudor C,White J,Mohun TJ,Weninger WJ


book

A human interactome in three quantitative dimensions organized by stoichiometries and abundances.
Cell163(3)712-23(2015 Oct)
Hein MY,Hubner NC,Poser I,Cox J,Nagaraj N,Toyoda Y,Gak IA,Weisswange I,Mansfeld J,Buchholz F,Hyman AA,Mann M


book

Heterochromatin Protein 1? (HP1?) has distinct functions and distinct nuclear distribution in pluripotent versus differentiated cells.
Genome biology16213(2015 Sep)
Mattout A,Aaronson Y,Sailaja BS,Raghu Ram EV,Harikumar A,Mallm JP,Sim KH,Nissim-Rafinia M,Supper E,Singh PB,Sze SK,Gasser SM,Rippe K,Meshorer E