Gene Symbol | Vps37d |
Entrez Gene ID | 194309 |
Full Name | vacuolar protein sorting 37D |
Synonyms | Wbscr24 |
General protein information |
|
Gene Type | protein-coding |
Organism | Mus musculus(house mouse) |
Genome |
ORF » Species Summary » Mus musculus » Vps37d cDNA ORF clone
Gene Symbol | Vps37d |
Entrez Gene ID | 194309 |
Full Name | vacuolar protein sorting 37D |
Synonyms | Wbscr24 |
General protein information |
|
Gene Type | protein-coding |
Organism | Mus musculus(house mouse) |
Genome |
mRNA | Protein | Name |
---|---|---|
NM_177574.4 | NP_808242.1 | vacuolar protein sorting-associated protein 37D isoform 2 |
XM_011240872.2 | XP_011239174.1 | vacuolar protein sorting-associated protein 37D isoform X1 |
NM_001199677.1 | NP_001186606.1 | vacuolar protein sorting-associated protein 37D isoform 1 |
XM_011240873.2 | XP_011239175.1 | vacuolar protein sorting-associated protein 37D isoform X2 |
XM_011240872.3 | XP_011239174.1 | vacuolar protein sorting-associated protein 37D isoform X1 |
XM_011240873.3 | XP_011239175.1 | vacuolar protein sorting-associated protein 37D isoform X2 |
Danio rerio (zebrafish) | LOC101884856 | XP_005172073.1 |
Bos taurus (cattle) | VPS37D | NP_001192647.1 |
Mus musculus (house mouse) | Vps37d | NP_001186606.1 |
Xenopus tropicalis (tropical clawed frog) | vps37d | XP_004911818.1 |
Homo sapiens (human) | VPS37D | NP_001071089.1 |
Pan troglodytes (chimpanzee) | VPS37D | XP_527783.4 |
Rattus norvegicus (Norway rat) | Vps37d | NP_001121665.1 |
Canis lupus familiaris (dog) | VPS37D | XP_546924.3 |
Gallus gallus (chicken) | VPS37D | XP_003642421.1 |
High-throughput discovery of novel developmental phenotypes.
Dickinson ME, Flenniken AM, Ji X, Teboul L, Wong MD, White JK, Meehan TF, Weninger WJ, Westerberg H, Adissu H, Baker CN, Bower L, Brown JM, Caddle LB, Chiani F, Clary D, Cleak J, Daly MJ, Denegre JM, Doe B, Dolan ME, Edie SM, Fuchs H, Gailus-Durner V, Galli A, Gambadoro A, Gallegos J, Guo S, Horner NR, Hsu CW, Johnson SJ, Kalaga S, Keith LC, Lanoue L, Lawson TN, Lek M, Mark M, Marschall S, Mason J, McElwee ML, Newbigging S, Nutter LM, Peterson KA, Ramirez-Solis R, Rowland DJ, Ryder E, Samocha KE, Seavitt JR, Selloum M, Szoke-Kovacs Z, Tamura M, Trainor AG, Tudose I, Wakana S, Warren J, Wendling O, West DB, Wong L, Yoshiki A, , , , , , , , , MacArthur DG, Tocchini-Valentini GP, Gao X, Flicek P, Bradley A, Skarnes WC, Justice MJ, Parkinson HE, Moore M, Wells S, Braun RE, Svenson KL, de Angelis MH, Herault Y, Mohun T, Mallon AM, Henkelman RM, Brown SD, Adams DJ, Lloyd KC, McKerlie C, Beaudet AL, Bu?an M, Murray SA
Nature537(7621)508-514(2016 09)
The International Mouse Phenotyping Consortium Web Portal, a unified point of access for knockout mice and related phenotyping data.
Koscielny G, Yaikhom G, Iyer V, Meehan TF, Morgan H, Atienza-Herrero J, Blake A, Chen CK, Easty R, Di Fenza A, Fiegel T, Grifiths M, Horne A, Karp NA, Kurbatova N, Mason JC, Matthews P, Oakley DJ, Qazi A, Regnart J, Retha A, Santos LA, Sneddon DJ, Warren J, Westerberg H, Wilson RJ, Melvin DG, Smedley D, Brown SD, Flicek P, Skarnes WC, Mallon AM, Parkinson H
Nucleic acids research42(Database issue)D802-9(2014 Jan)
GeneRIFs: Gene References Into Functions What's a GeneRIF?
The following Vps37d gene cDNA ORF clone sequences were retrieved from the NCBI Reference Sequence Database (RefSeq). These sequences represent the protein coding region of the Vps37d cDNA ORF which is encoded by the open reading frame (ORF) sequence. ORF sequences can be delivered in our standard vector, pcDNA3.1+/C-(K)DYK or the vector of your choice as an expression/transfection-ready ORF clone. Not the clone you want? Click here to find your clone.
CloneID | OMu72583 | |
Clone ID Related Accession (Same CDS sequence) | XM_011240872.2 , XM_011240872.3 | |
Accession Version | XM_011240872.2 | Documents for ORF clone product in default vector |
Sequence Information | ORF Nucleotide Sequence (Length: 765bp) Protein sequence SNP |
|
Vector | pcDNA3.1-C-(k)DYK or customized vector | User Manual |
Clone information | Clone Map | MSDS |
Tag on pcDNA3.1+/C-(K)DYK | C terminal DYKDDDDK tags | |
ORF Insert Method | CloneEZ™ Seamless cloning technology | |
Insert Structure | linear | |
Update Date | 2016-06-21 | |
Organism | Mus musculus(house mouse) | |
Product | vacuolar protein sorting-associated protein 37D isoform X1 | |
Comment | Comment: MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NC_000071.6) annotated using gene prediction method: Gnomon, supported by EST evidence. Also see: Documentation of NCBI's Annotation Process On Jun 22, 2016 this sequence version replaced XM_011240872.1. ##Genome-Annotation-Data-START## Annotation Provider :: NCBI Annotation Status :: Full annotation Annotation Version :: Mus musculus Annotation Release 106 Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline Annotation Software Version :: 7.1 Annotation Method :: Best-placed RefSeq; Gnomon Features Annotated :: Gene; mRNA; CDS; ncRNA ##Genome-Annotation-Data-END## |
1 | ATGGGGGGCG CCCCGATCCA GCCTGGGGCG AGTGGTGCGG AAGGGGGGCG CCCGGGGATG |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
RefSeq | XP_011239174.1 |
CDS | 129..893 |
Translation |
Target ORF information:
Target ORF information:
|
XM_011240872.2 |
1 | ATGGGGGGCG CCCCGATCCA GCCTGGGGCG AGTGGTGCGG AAGGGGGGCG CCCGGGGATG |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
CloneID | OMu72584 | |
Clone ID Related Accession (Same CDS sequence) | XM_011240873.2 , XM_011240873.3 | |
Accession Version | XM_011240873.2 | Documents for ORF clone product in default vector |
Sequence Information | ORF Nucleotide Sequence (Length: 705bp) Protein sequence SNP |
|
Vector | pcDNA3.1-C-(k)DYK or customized vector | User Manual |
Clone information | Clone Map | MSDS |
Tag on pcDNA3.1+/C-(K)DYK | C terminal DYKDDDDK tags | |
ORF Insert Method | CloneEZ™ Seamless cloning technology | |
Insert Structure | linear | |
Update Date | 2016-06-21 | |
Organism | Mus musculus(house mouse) | |
Product | vacuolar protein sorting-associated protein 37D isoform X2 | |
Comment | Comment: MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NC_000071.6) annotated using gene prediction method: Gnomon, supported by EST evidence. Also see: Documentation of NCBI's Annotation Process On Jun 22, 2016 this sequence version replaced XM_011240873.1. ##Genome-Annotation-Data-START## Annotation Provider :: NCBI Annotation Status :: Full annotation Annotation Version :: Mus musculus Annotation Release 106 Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline Annotation Software Version :: 7.1 Annotation Method :: Best-placed RefSeq; Gnomon Features Annotated :: Gene; mRNA; CDS; ncRNA ##Genome-Annotation-Data-END## |
1 | ATGAGCCCAA GCTGGACCGG ATCGTGCGGC TCAGCAGGAA GCTCTCGTCC ACCGCAGTTC |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
RefSeq | XP_011239175.1 |
CDS | 93..797 |
Translation |
Target ORF information:
Target ORF information:
|
XM_011240873.2 |
1 | ATGAGCCCAA GCTGGACCGG ATCGTGCGGC TCAGCAGGAA GCTCTCGTCC ACCGCAGTTC |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
CloneID | OMu72583 | |
Clone ID Related Accession (Same CDS sequence) | XM_011240872.2 , XM_011240872.3 | |
Accession Version | XM_011240872.3 Latest version! | Documents for ORF clone product in default vector |
Sequence Information | ORF Nucleotide Sequence (Length: 765bp) Protein sequence SNP |
|
Vector | pcDNA3.1-C-(k)DYK or customized vector | User Manual |
Clone information | Clone Map | MSDS |
Tag on pcDNA3.1+/C-(K)DYK | C terminal DYKDDDDK tags | |
ORF Insert Method | CloneEZ™ Seamless cloning technology | |
Insert Structure | linear | |
Update Date | 2019-08-07 | |
Organism | Mus musculus(house mouse) | |
Product | vacuolar protein sorting-associated protein 37D isoform X1 | |
Comment | Comment: MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NC_000071.6) annotated using gene prediction method: Gnomon, supported by EST evidence. Also see: Documentation of NCBI's Annotation Process On Aug 8, 2019 this sequence version replaced XM_011240872.2. ##Genome-Annotation-Data-START## Annotation Provider :: NCBI Annotation Status :: Full annotation Annotation Name :: Mus musculus Annotation Release 108 Annotation Version :: 108 Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline Annotation Software Version :: 8.2 Annotation Method :: Best-placed RefSeq; Gnomon Features Annotated :: Gene; mRNA; CDS; ncRNA ##Genome-Annotation-Data-END## |
1 | ATGGGGGGCG CCCCGATCCA GCCTGGGGCG AGTGGTGCGG AAGGGGGGCG CCCGGGGATG |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
RefSeq | XP_011239174.1 |
CDS | 182..946 |
Translation |
Target ORF information:
Target ORF information:
|
XM_011240872.3 |
1 | ATGGGGGGCG CCCCGATCCA GCCTGGGGCG AGTGGTGCGG AAGGGGGGCG CCCGGGGATG |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
CloneID | OMu72584 | |
Clone ID Related Accession (Same CDS sequence) | XM_011240873.2 , XM_011240873.3 | |
Accession Version | XM_011240873.3 Latest version! | Documents for ORF clone product in default vector |
Sequence Information | ORF Nucleotide Sequence (Length: 705bp) Protein sequence SNP |
|
Vector | pcDNA3.1-C-(k)DYK or customized vector | User Manual |
Clone information | Clone Map | MSDS |
Tag on pcDNA3.1+/C-(K)DYK | C terminal DYKDDDDK tags | |
ORF Insert Method | CloneEZ™ Seamless cloning technology | |
Insert Structure | linear | |
Update Date | 2019-08-07 | |
Organism | Mus musculus(house mouse) | |
Product | vacuolar protein sorting-associated protein 37D isoform X2 | |
Comment | Comment: MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NC_000071.6) annotated using gene prediction method: Gnomon, supported by EST evidence. Also see: Documentation of NCBI's Annotation Process On Aug 8, 2019 this sequence version replaced XM_011240873.2. ##Genome-Annotation-Data-START## Annotation Provider :: NCBI Annotation Status :: Full annotation Annotation Name :: Mus musculus Annotation Release 108 Annotation Version :: 108 Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline Annotation Software Version :: 8.2 Annotation Method :: Best-placed RefSeq; Gnomon Features Annotated :: Gene; mRNA; CDS; ncRNA ##Genome-Annotation-Data-END## |
1 | ATGAGCCCAA GCTGGACCGG ATCGTGCGGC TCAGCAGGAA GCTCTCGTCC ACCGCAGTTC |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
RefSeq | XP_011239175.1 |
CDS | 85..789 |
Translation |
Target ORF information:
Target ORF information:
|
XM_011240873.3 |
1 | ATGAGCCCAA GCTGGACCGG ATCGTGCGGC TCAGCAGGAA GCTCTCGTCC ACCGCAGTTC |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
CloneID | OMu02286 | |
Clone ID Related Accession (Same CDS sequence) | NM_001199677.1 | |
Accession Version | NM_001199677.1 Latest version! | Documents for ORF clone product in default vector |
Sequence Information | ORF Nucleotide Sequence (Length: 786bp) Protein sequence SNP |
|
Vector | pcDNA3.1-C-(k)DYK or customized vector | User Manual |
Clone information | Clone Map | MSDS |
Tag on pcDNA3.1+/C-(K)DYK | C terminal DYKDDDDK tags | |
ORF Insert Method | CloneEZ™ Seamless cloning technology | |
Insert Structure | linear | |
Update Date | 2019-02-21 | |
Organism | Mus musculus(house mouse) | |
Product | vacuolar protein sorting-associated protein 37D isoform 1 | |
Comment | Comment: VALIDATED REFSEQ: This record has undergone validation or preliminary review. The reference sequence was derived from AY081953.2 and BU704550.1. Transcript Variant: This variant (1) represents the longer transcript and it encodes the longer protein (isoform 1). ##Evidence-Data-START## Transcript exon combination :: AY081953.2, BC044789.1 [ECO:0000332] RNAseq introns :: single sample supports all introns SAMN01164139 [ECO:0000348] ##Evidence-Data-END## |
1 | ATGTACCGGG CCCGGGCGGC GCGGGCGGGG CCGGAGCCCG GCAGCCCGGG GCGCTTTGGG |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
RefSeq | NP_001186606.1 |
CDS | 68..853 |
Translation |
Target ORF information:
Target ORF information:
|
NM_001199677.1 |
1 | ATGTACCGGG CCCGGGCGGC GCGGGCGGGG CCGGAGCCCG GCAGCCCGGG GCGCTTTGGG |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
CloneID | OMu06454 | |
Clone ID Related Accession (Same CDS sequence) | NM_177574.4 | |
Accession Version | NM_177574.4 Latest version! | Documents for ORF clone product in default vector |
Sequence Information | ORF Nucleotide Sequence (Length: 531bp) Protein sequence SNP |
|
Vector | pcDNA3.1-C-(k)DYK or customized vector | User Manual |
Clone information | Clone Map | MSDS |
Tag on pcDNA3.1+/C-(K)DYK | C terminal DYKDDDDK tags | |
ORF Insert Method | CloneEZ™ Seamless cloning technology | |
Insert Structure | linear | |
Update Date | 2019-02-22 | |
Organism | Mus musculus(house mouse) | |
Product | vacuolar protein sorting-associated protein 37D isoform 2 | |
Comment | Comment: VALIDATED REFSEQ: This record has undergone validation or preliminary review. The reference sequence was derived from AK090181.1 and BU704550.1. On Dec 12, 2010 this sequence version replaced NM_177574.3. Transcript Variant: This variant (2) lacks two alternate exons, compared to variant 1. The resulting protein (isoform 2) is shorter when it is compared to isoform 1. ##Evidence-Data-START## Transcript exon combination :: AY352519.1, AK090181.1 [ECO:0000332] RNAseq introns :: single sample supports all introns SAMN00849374, SAMN00849376 [ECO:0000348] ##Evidence-Data-END## |
1 | ATGTACCGGG CCCGGGCGGC GCGGGCGGGG CCGGAGCCCG GCAGCCCGGG GCGCTTTGGG |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
RefSeq | NP_808242.1 |
CDS | 68..598 |
Translation |
Target ORF information:
Target ORF information:
|
NM_177574.4 |
1 | ATGTACCGGG CCCGGGCGGC GCGGGCGGGG CCGGAGCCCG GCAGCCCGGG GCGCTTTGGG |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
High-throughput discovery of novel developmental phenotypes. |
The International Mouse Phenotyping Consortium Web Portal, a unified point of access for knockout mice and related phenotyping data. |