Gene Symbol | Zfp180 |
Entrez Gene ID | 210135 |
Full Name | zinc finger protein 180 |
Synonyms | 2310040I01Rik,AI852378,D130011P11,HHZ168 |
General protein information |
|
Gene Type | protein-coding |
Organism | Mus musculus(house mouse) |
Genome |
ORF » Species Summary » Mus musculus » Zfp180 cDNA ORF clone
Gene Symbol | Zfp180 |
Entrez Gene ID | 210135 |
Full Name | zinc finger protein 180 |
Synonyms | 2310040I01Rik,AI852378,D130011P11,HHZ168 |
General protein information |
|
Gene Type | protein-coding |
Organism | Mus musculus(house mouse) |
Genome |
mRNA | Protein | Name |
---|---|---|
XM_006539707.1 | XP_006539770.1 | zinc finger protein 180 isoform X1 |
NM_172483.2 | NP_766071.1 | zinc finger protein 180 isoform e |
NM_001289637.1 | NP_001276566.1 | zinc finger protein 180 isoform b |
NM_001289634.1 | NP_001276563.1 | zinc finger protein 180 isoform b |
NM_001045486.2 | NP_001038951.1 | zinc finger protein 180 isoform a |
NM_001289641.1 | NP_001276570.1 | zinc finger protein 180 isoform d |
NM_001289640.1 | NP_001276569.1 | zinc finger protein 180 isoform c |
XM_030242320.1 | XP_030098180.1 | zinc finger protein 180 isoform X1 |
Mus musculus (house mouse) | Zfp180 | NP_001038951.1 |
Homo sapiens (human) | ZNF180 | NP_001275688.1 |
Pan troglodytes (chimpanzee) | ZNF180 | XP_001161363.1 |
Rattus norvegicus (Norway rat) | Zfp180 | NP_653358.2 |
ZNF180 | XP_001109160.1 | |
Canis lupus familiaris (dog) | ZNF180 | XP_005616526.1 |
Bos taurus (cattle) | ZNF180 | NP_001069112.2 |
Differential expansion of zinc-finger transcription factor loci in homologous human and mouse gene clusters.
Shannon M, Hamilton AT, Gordon L, Branscomb E, Stubbs L
Genome research13(6A)1097-110(2003 Jun)
GeneRIFs: Gene References Into Functions What's a GeneRIF?
The following Zfp180 gene cDNA ORF clone sequences were retrieved from the NCBI Reference Sequence Database (RefSeq). These sequences represent the protein coding region of the Zfp180 cDNA ORF which is encoded by the open reading frame (ORF) sequence. ORF sequences can be delivered in our standard vector, pcDNA3.1+/C-(K)DYK or the vector of your choice as an expression/transfection-ready ORF clone. Not the clone you want? Click here to find your clone.
CloneID | OMu38113 | |
Clone ID Related Accession (Same CDS sequence) | XM_006539707.1 , NM_172483.2 , XM_030242320.1 | |
Accession Version | XM_030242320.1 Latest version! | Documents for ORF clone product in default vector |
Sequence Information | ORF Nucleotide Sequence (Length: 1443bp) Protein sequence SNP |
|
Vector | pcDNA3.1-C-(k)DYK or customized vector | User Manual |
Clone information | Clone Map | MSDS |
Tag on pcDNA3.1+/C-(K)DYK | C terminal DYKDDDDK tags | |
ORF Insert Method | CloneEZ™ Seamless cloning technology | |
Insert Structure | linear | |
Update Date | 2019-08-07 | |
Organism | Mus musculus(house mouse) | |
Product | zinc finger protein 180 isoform X1 | |
Comment | Comment: MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NC_000073.6) annotated using gene prediction method: Gnomon, supported by mRNA and EST evidence. Also see: Documentation of NCBI's Annotation Process ##Genome-Annotation-Data-START## Annotation Provider :: NCBI Annotation Status :: Full annotation Annotation Name :: Mus musculus Annotation Release 108 Annotation Version :: 108 Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline Annotation Software Version :: 8.2 Annotation Method :: Best-placed RefSeq; Gnomon Features Annotated :: Gene; mRNA; CDS; ncRNA ##Genome-Annotation-Data-END## |
1 | ATGATACCCC TCAGAAACCA TTTCCATAAA CAGGCGTCAC ATGTTAAAAA GTTGCATGGT |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
RefSeq | XP_030098180.1 |
CDS | 797..2239 |
Translation |
Target ORF information:
Target ORF information:
|
XM_030242320.1 |
1 | ATGATACCCC TCAGAAACCA TTTCCATAAA CAGGCGTCAC ATGTTAAAAA GTTGCATGGT |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
CloneID | OMu38113 | |
Clone ID Related Accession (Same CDS sequence) | XM_006539707.1 , NM_172483.2 , XM_030242320.1 | |
Accession Version | NM_172483.2 Latest version! | Documents for ORF clone product in default vector |
Sequence Information | ORF Nucleotide Sequence (Length: 1443bp) Protein sequence SNP |
|
Vector | pcDNA3.1-C-(k)DYK or customized vector | User Manual |
Clone information | Clone Map | MSDS |
Tag on pcDNA3.1+/C-(K)DYK | C terminal DYKDDDDK tags | |
ORF Insert Method | CloneEZ™ Seamless cloning technology | |
Insert Structure | linear | |
Update Date | 2018-05-30 | |
Organism | Mus musculus(house mouse) | |
Product | zinc finger protein 180 isoform e | |
Comment | Comment: VALIDATED REFSEQ: This record has undergone validation or preliminary review. The reference sequence was derived from AC121271.8 and AK083802.1. On Jan 24, 2014 this sequence version replaced NM_172483.1. Transcript Variant: This variant (6) lacks two internal exons, and it thus differs in its 5' UTR and initiates translation from a downstream in-frame start codon, compared to variant 1. The encoded isoform (e) is shorter at the N-terminus, compared to isoform a. ##Evidence-Data-START## Transcript exon combination :: AK083802.1, BB656276.1 [ECO:0000332] RNAseq introns :: single sample supports all introns SAMN01164131, SAMN01164132 [ECO:0000348] ##Evidence-Data-END## COMPLETENESS: complete on the 3' end. |
1 | ATGATACCCC TCAGAAACCA TTTCCATAAA CAGGCGTCAC ATGTTAAAAA GTTGCATGGT |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
RefSeq | NP_766071.1 |
CDS | 702..2144 |
Translation |
Target ORF information:
Target ORF information:
|
NM_172483.2 |
1 | ATGATACCCC TCAGAAACCA TTTCCATAAA CAGGCGTCAC ATGTTAAAAA GTTGCATGGT |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
CloneID | OMu57981 | |
Clone ID Related Accession (Same CDS sequence) | NM_001045486.2 | |
Accession Version | NM_001045486.2 Latest version! | Documents for ORF clone product in default vector |
Sequence Information | ORF Nucleotide Sequence (Length: 1968bp) Protein sequence SNP |
|
Vector | pcDNA3.1-C-(k)DYK or customized vector | User Manual |
Clone information | Clone Map | MSDS |
Tag on pcDNA3.1+/C-(K)DYK | C terminal DYKDDDDK tags | |
ORF Insert Method | CloneEZ™ Seamless cloning technology | |
Insert Structure | linear | |
Update Date | 2018-05-30 | |
Organism | Mus musculus(house mouse) | |
Product | zinc finger protein 180 isoform a | |
Comment | Comment: VALIDATED REFSEQ: This record has undergone validation or preliminary review. The reference sequence was derived from AC121271.8, AK141922.1 and BC066115.1. On Jan 24, 2014 this sequence version replaced NM_001045486.1. Transcript Variant: This variant (1) encodes the longest isoform (a). ##Evidence-Data-START## Transcript exon combination :: BC085472.1, AK145004.1 [ECO:0000332] RNAseq introns :: single sample supports all introns SAMN00849374, SAMN00849375 [ECO:0000348] ##Evidence-Data-END## COMPLETENESS: complete on the 3' end. |
1 | ATGGAGCAAC AAGATGATGA GTCCCTGGAG TCCCTGCAGG CCTGTGTGGA GAACTTTGTT |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
RefSeq | NP_001038951.1 |
CDS | 373..2340 |
Translation |
Target ORF information:
Target ORF information:
|
NM_001045486.2 |
1 | ATGGAGCAAC AAGATGATGA GTCCCTGGAG TCCCTGCAGG CCTGTGTGGA GAACTTTGTT |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
CloneID | OMu57984 | |
Clone ID Related Accession (Same CDS sequence) | NM_001289640.1 | |
Accession Version | NM_001289640.1 Latest version! | Documents for ORF clone product in default vector |
Sequence Information | ORF Nucleotide Sequence (Length: 1866bp) Protein sequence SNP |
|
Vector | pcDNA3.1-C-(k)DYK or customized vector | User Manual |
Clone information | Clone Map | MSDS |
Tag on pcDNA3.1+/C-(K)DYK | C terminal DYKDDDDK tags | |
ORF Insert Method | CloneEZ™ Seamless cloning technology | |
Insert Structure | linear | |
Update Date | 2018-05-30 | |
Organism | Mus musculus(house mouse) | |
Product | zinc finger protein 180 isoform c | |
Comment | Comment: VALIDATED REFSEQ: This record has undergone validation or preliminary review. The reference sequence was derived from AC121271.8, AK141922.1 and BC066115.1. Transcript Variant: This variant (4) uses an alternate splice site in an internal exon, and it thus differs in its 5' UTR and initiates translation from an alternate start codon, compared to variant 1. The encoded isoform (c) has a distinct and shorter N-terminus, compared to isoform a. ##Evidence-Data-START## Transcript exon combination :: BC063741.1, BU509904.1 [ECO:0000332] RNAseq introns :: single sample supports all introns SAMN01164139, SAMN01164143 [ECO:0000348] ##Evidence-Data-END## COMPLETENESS: complete on the 3' end. |
1 | ATGCTGGGTC ACTGGACATC ATGCCTCAGC ACAGACTTCA AGATTGTAAC TGTGGACCTT |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
RefSeq | NP_001276569.1 |
CDS | 470..2335 |
Translation |
Target ORF information:
Target ORF information:
|
NM_001289640.1 |
1 | ATGCTGGGTC ACTGGACATC ATGCCTCAGC ACAGACTTCA AGATTGTAAC TGTGGACCTT |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
CloneID | OMu58012 | |
Clone ID Related Accession (Same CDS sequence) | NM_001289637.1 , NM_001289634.1 | |
Accession Version | NM_001289637.1 Latest version! | Documents for ORF clone product in default vector |
Sequence Information | ORF Nucleotide Sequence (Length: 1896bp) Protein sequence SNP |
|
Vector | pcDNA3.1-C-(k)DYK or customized vector | User Manual |
Clone information | Clone Map | MSDS |
Tag on pcDNA3.1+/C-(K)DYK | C terminal DYKDDDDK tags | |
ORF Insert Method | CloneEZ™ Seamless cloning technology | |
Insert Structure | linear | |
Update Date | 2018-05-30 | |
Organism | Mus musculus(house mouse) | |
Product | zinc finger protein 180 isoform b | |
Comment | Comment: VALIDATED REFSEQ: This record has undergone validation or preliminary review. The reference sequence was derived from AC121271.8, CF736119.1, AK141922.1 and BC066115.1. On Jan 24, 2014 this sequence version replaced XM_006539706.1. Transcript Variant: This variant (3) lacks an internal exon, and it thus differs in its 5' UTR and initiates translation from a downstream in-frame start codon, compared to variant 1. The encoded isoform (b) is shorter at the N-terminus, compared to isoform a. Both variants 2 and 3 encode isoform b. ##Evidence-Data-START## Transcript exon combination :: SRR1660815.278717.1, CF736119.1 [ECO:0000332] RNAseq introns :: single sample supports all introns SAMN00849374, SAMN00849375 [ECO:0000348] ##Evidence-Data-END## COMPLETENESS: complete on the 3' end. |
1 | ATGATCATTG AAGTGGAGGG AGAAGATGCT GGGTCACTGG ACATCATGCC TCAGGAAAGC |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
RefSeq | NP_001276566.1 |
CDS | 364..2259 |
Translation |
Target ORF information:
Target ORF information:
|
NM_001289637.1 |
1 | ATGATCATTG AAGTGGAGGG AGAAGATGCT GGGTCACTGG ACATCATGCC TCAGGAAAGC |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
CloneID | OMu58012 | |
Clone ID Related Accession (Same CDS sequence) | NM_001289637.1 , NM_001289634.1 | |
Accession Version | NM_001289634.1 Latest version! | Documents for ORF clone product in default vector |
Sequence Information | ORF Nucleotide Sequence (Length: 1896bp) Protein sequence SNP |
|
Vector | pcDNA3.1-C-(k)DYK or customized vector | User Manual |
Clone information | Clone Map | MSDS |
Tag on pcDNA3.1+/C-(K)DYK | C terminal DYKDDDDK tags | |
ORF Insert Method | CloneEZ™ Seamless cloning technology | |
Insert Structure | linear | |
Update Date | 2018-05-30 | |
Organism | Mus musculus(house mouse) | |
Product | zinc finger protein 180 isoform b | |
Comment | Comment: VALIDATED REFSEQ: This record has undergone validation or preliminary review. The reference sequence was derived from AC121271.8, BQ771416.1, AK141922.1 and BC066115.1. On Jan 24, 2014 this sequence version replaced XM_006539705.1. Transcript Variant: This variant (2) includes an additional internal exon, and it thus differs in its 5' UTR and initiates translation from a downstream in-frame start codon, compared to variant 1. The encoded isoform (b) is shorter at the N-terminus, compared to isoform a. Both variants 2 and 3 encode isoform b. ##Evidence-Data-START## Transcript exon combination :: SRR1660819.159931.1, SRR1660811.5804.1 [ECO:0000332] RNAseq introns :: single sample supports all introns SAMN00849374, SAMN00849375 [ECO:0000348] ##Evidence-Data-END## COMPLETENESS: complete on the 3' end. |
1 | ATGATCATTG AAGTGGAGGG AGAAGATGCT GGGTCACTGG ACATCATGCC TCAGGAAAGC |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
RefSeq | NP_001276563.1 |
CDS | 549..2444 |
Translation |
Target ORF information:
Target ORF information:
|
NM_001289634.1 |
1 | ATGATCATTG AAGTGGAGGG AGAAGATGCT GGGTCACTGG ACATCATGCC TCAGGAAAGC |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
CloneID | OMu58026 | |
Clone ID Related Accession (Same CDS sequence) | NM_001289641.1 | |
Accession Version | NM_001289641.1 Latest version! | Documents for ORF clone product in default vector |
Sequence Information | ORF Nucleotide Sequence (Length: 1788bp) Protein sequence SNP |
|
Vector | pcDNA3.1-C-(k)DYK or customized vector | User Manual |
Clone information | Clone Map | MSDS |
Tag on pcDNA3.1+/C-(K)DYK | C terminal DYKDDDDK tags | |
ORF Insert Method | CloneEZ™ Seamless cloning technology | |
Insert Structure | linear | |
Update Date | 2018-05-30 | |
Organism | Mus musculus(house mouse) | |
Product | zinc finger protein 180 isoform d | |
Comment | Comment: VALIDATED REFSEQ: This record has undergone validation or preliminary review. The reference sequence was derived from AC121271.8, AK141922.1 and BC066115.1. Transcript Variant: This variant (5) uses an alternate splice site in an internal exon, and it thus differs in its 5' UTR and uses a downstream in-frame start codon, compared to variant 1. The encoded isoform (d) is shorter at the N-terminus, compared to isoform a. ##Evidence-Data-START## Transcript exon combination :: AK144892.1, SRR1660811.249943.1 [ECO:0000332] RNAseq introns :: single sample supports all introns SAMN00849380, SAMN00849382 [ECO:0000348] ##Evidence-Data-END## COMPLETENESS: complete on the 3' end. |
1 | ATGTGGAACA ATGCCCAGAG AACCCCAGAG AAAACCGTGA TCCTGGAAGG CCACAGGGAC |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
RefSeq | NP_001276570.1 |
CDS | 513..2300 |
Translation |
Target ORF information:
Target ORF information:
|
NM_001289641.1 |
1 | ATGTGGAACA ATGCCCAGAG AACCCCAGAG AAAACCGTGA TCCTGGAAGG CCACAGGGAC |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
CloneID | OMu38113 | |
Clone ID Related Accession (Same CDS sequence) | XM_006539707.1 , NM_172483.2 , XM_030242320.1 | |
Accession Version | XM_006539707.1 Latest version! | Documents for ORF clone product in default vector |
Sequence Information | ORF Nucleotide Sequence (Length: 1443bp) Protein sequence SNP |
|
Vector | pcDNA3.1-C-(k)DYK or customized vector | User Manual |
Clone information | Clone Map | MSDS |
Tag on pcDNA3.1+/C-(K)DYK | C terminal DYKDDDDK tags | |
ORF Insert Method | CloneEZ™ Seamless cloning technology | |
Insert Structure | linear | |
Update Date | 2016-06-21 | |
Organism | Mus musculus(house mouse) | |
Product | zinc finger protein 180 isoform X1 | |
Comment | Comment: MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NC_000073.6) annotated using gene prediction method: Gnomon, supported by mRNA and EST evidence. Also see: Documentation of NCBI's Annotation Process ##Genome-Annotation-Data-START## Annotation Provider :: NCBI Annotation Status :: Full annotation Annotation Version :: Mus musculus Annotation Release 106 Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline Annotation Software Version :: 7.1 Annotation Method :: Best-placed RefSeq; Gnomon Features Annotated :: Gene; mRNA; CDS; ncRNA ##Genome-Annotation-Data-END## |
1 | ATGATACCCC TCAGAAACCA TTTCCATAAA CAGGCGTCAC ATGTTAAAAA GTTGCATGGT |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
RefSeq | XP_006539770.1 |
CDS | 354..1796 |
Translation |
Target ORF information:
Target ORF information:
|
XM_006539707.1 |
1 | ATGATACCCC TCAGAAACCA TTTCCATAAA CAGGCGTCAC ATGTTAAAAA GTTGCATGGT |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
Differential expansion of zinc-finger transcription factor loci in homologous human and mouse gene clusters. |