Gene Symbol | Best2 |
Entrez Gene ID | 212989 |
Full Name | bestrophin 2 |
Synonyms | Vmd2l1 |
General protein information |
|
Gene Type | protein-coding |
Organism | Mus musculus(house mouse) |
Genome |
ORF » Species Summary » Mus musculus » Best2 cDNA ORF clone
Gene Symbol | Best2 |
Entrez Gene ID | 212989 |
Full Name | bestrophin 2 |
Synonyms | Vmd2l1 |
General protein information |
|
Gene Type | protein-coding |
Organism | Mus musculus(house mouse) |
Genome |
mRNA | Protein | Name |
---|---|---|
XM_011248341.3 | XP_011246643.1 | bestrophin-2 isoform X2 |
NM_001130194.1 | NP_001123666.1 | bestrophin-2 |
XM_011248341.2 | XP_011246643.1 | bestrophin-2 isoform X2 |
XM_006530819.1 | XP_006530882.1 | bestrophin-2 isoform X1 |
XM_006530820.1 | XP_006530883.1 | bestrophin-2 isoform X1 |
Bos taurus (cattle) | BEST2 | XP_002688807.1 |
Mus musculus (house mouse) | Best2 | NP_001123666.1 |
Rattus norvegicus (Norway rat) | Best2 | NP_001102365.1 |
Anopheles gambiae (African malaria mosquito) | AgaP_AGAP011745 | XP_320767.3 |
BEST2 | XP_001108800.1 | |
Canis lupus familiaris (dog) | BEST2 | XP_003639774.1 |
Drosophila melanogaster (fruit fly) | Best1 | NP_652603.1 |
Pan troglodytes (chimpanzee) | BEST2 | XP_512414.2 |
Danio rerio (zebrafish) | best2 | XP_695597.1 |
Caenorhabditis elegans (roundworm) | best-23 | NP_001122668.1 |
Xenopus tropicalis (tropical clawed frog) | best2 | NP_988974.1 |
Homo sapiens (human) | BEST2 | NP_060152.2 |
Store-operated Ca2+ entry regulates Ca2+-activated chloride channels and eccrine sweat gland function.
Concepcion AR, Vaeth M, Wagner LE 2nd, Eckstein M, Hecht L, Yang J, Crottes D, Seidl M, Shin HP, Weidinger C, Cameron S, Turvey SE, Issekutz T, Meyts I, Lacruz RS, Cuk M, Yule DI, Feske S
The Journal of clinical investigation126(11)4303-4318(2016 Nov)
Regulation of anterior chamber drainage by bicarbonate-sensitive soluble adenylyl cyclase in the ciliary body.
Lee YS, Tresguerres M, Hess K, Marmorstein LY, Levin LR, Buck J, Marmorstein AD
The Journal of biological chemistry286(48)41353-8(2011 Dec)
Bestrophin-2 mediates bicarbonate transport by goblet cells in mouse colon.
Yu K, Lujan R, Marmorstein A, Gabriel S, Hartzell HC
The Journal of clinical investigation120(5)1722-35(2010 May)
Tmem16A encodes the Ca2+-activated Cl- channel in mouse submandibular salivary gland acinar cells.
Romanenko VG, Catal?n MA, Brown DA, Putzier I, Hartzell HC, Marmorstein AD, Gonzalez-Begne M, Rock JR, Harfe BD, Melvin JE
The Journal of biological chemistry285(17)12990-3001(2010 Apr)
Calcium-activated chloride currents in olfactory sensory neurons from mice lacking bestrophin-2.
Pifferi S, Dibattista M, Sagheddu C, Boccaccio A, Al Qteishat A, Ghirardi F, Tirindelli R, Menini A
The Journal of physiology587(Pt 17)4265-79(2009 Sep)
GeneRIFs: Gene References Into Functions What's a GeneRIF?
Bestrophin-2 mediates bicarbonate transport by goblet cells in mouse colon
Title: Bestrophin-2 mediates bicarbonate transport by goblet cells in mouse colon.
Results suggest that bestrophin 2 plays a critical role during differentiation and growth of axons and cilia.
Title: Bestrophin 2: an anion channel associated with neurogenesis in chemosensory systems.
Asp-rich domain has two defined binding sites and D301A and D304A mutations may impact the binding of the metal ions
Title: Regulation of bestrophins by Ca2+: a theoretical and experimental study.
suggest a role of bestrophin 1 and 2 for Ca(2+) dependent Cl(-) secretion in mouse airways
Title: Bestrophin 1 and 2 are components of the Ca(2+) activated Cl(-) conductance in mouse airways.
Determined HCO3(-)/Cl(-) transport via Best2 and the effect of disease causing mutations.
Title: Bestrophin Cl- channels are highly permeable to HCO3-.
The following Best2 gene cDNA ORF clone sequences were retrieved from the NCBI Reference Sequence Database (RefSeq). These sequences represent the protein coding region of the Best2 cDNA ORF which is encoded by the open reading frame (ORF) sequence. ORF sequences can be delivered in our standard vector, pcDNA3.1+/C-(K)DYK or the vector of your choice as an expression/transfection-ready ORF clone. Not the clone you want? Click here to find your clone.
CloneID | OMu72817 | |
Clone ID Related Accession (Same CDS sequence) | XM_011248341.3 , XM_011248341.2 | |
Accession Version | XM_011248341.2 | Documents for ORF clone product in default vector |
Sequence Information | ORF Nucleotide Sequence (Length: 1440bp) Protein sequence SNP |
|
Vector | pcDNA3.1-C-(k)DYK or customized vector | User Manual |
Clone information | Clone Map | MSDS |
Tag on pcDNA3.1+/C-(K)DYK | C terminal DYKDDDDK tags | |
ORF Insert Method | CloneEZ™ Seamless cloning technology | |
Insert Structure | linear | |
Update Date | 2016-06-21 | |
Organism | Mus musculus(house mouse) | |
Product | bestrophin-2 isoform X2 | |
Comment | Comment: MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NC_000074.6) annotated using gene prediction method: Gnomon, supported by EST evidence. Also see: Documentation of NCBI's Annotation Process On Jun 22, 2016 this sequence version replaced XM_011248341.1. ##Genome-Annotation-Data-START## Annotation Provider :: NCBI Annotation Status :: Full annotation Annotation Version :: Mus musculus Annotation Release 106 Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline Annotation Software Version :: 7.1 Annotation Method :: Best-placed RefSeq; Gnomon Features Annotated :: Gene; mRNA; CDS; ncRNA ##Genome-Annotation-Data-END## |
1 | ATGTTTCCTG GGACTCTACA TGGCACTAAG CGCCGCCTAT CGCTACTGCA TTCCCTACCC |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
RefSeq | XP_011246643.1 |
CDS | 73..1512 |
Translation |
Target ORF information:
Target ORF information:
|
XM_011248341.2 |
1 | ATGTTTCCTG GGACTCTACA TGGCACTAAG CGCCGCCTAT CGCTACTGCA TTCCCTACCC |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
CloneID | OMu72817 | |
Clone ID Related Accession (Same CDS sequence) | XM_011248341.3 , XM_011248341.2 | |
Accession Version | XM_011248341.3 Latest version! | Documents for ORF clone product in default vector |
Sequence Information | ORF Nucleotide Sequence (Length: 1440bp) Protein sequence SNP |
|
Vector | pcDNA3.1-C-(k)DYK or customized vector | User Manual |
Clone information | Clone Map | MSDS |
Tag on pcDNA3.1+/C-(K)DYK | C terminal DYKDDDDK tags | |
ORF Insert Method | CloneEZ™ Seamless cloning technology | |
Insert Structure | linear | |
Update Date | 2019-08-07 | |
Organism | Mus musculus(house mouse) | |
Product | bestrophin-2 isoform X2 | |
Comment | Comment: MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NC_000074.6) annotated using gene prediction method: Gnomon, supported by EST evidence. Also see: Documentation of NCBI's Annotation Process On Aug 8, 2019 this sequence version replaced XM_011248341.2. ##Genome-Annotation-Data-START## Annotation Provider :: NCBI Annotation Status :: Full annotation Annotation Name :: Mus musculus Annotation Release 108 Annotation Version :: 108 Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline Annotation Software Version :: 8.2 Annotation Method :: Best-placed RefSeq; Gnomon Features Annotated :: Gene; mRNA; CDS; ncRNA ##Genome-Annotation-Data-END## |
1 | ATGTTTCCTG GGACTCTACA TGGCACTAAG CGCCGCCTAT CGCTACTGCA TTCCCTACCC |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
RefSeq | XP_011246643.1 |
CDS | 67..1506 |
Translation |
Target ORF information:
Target ORF information:
|
XM_011248341.3 |
1 | ATGTTTCCTG GGACTCTACA TGGCACTAAG CGCCGCCTAT CGCTACTGCA TTCCCTACCC |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
CloneID | OMu06096 | |
Clone ID Related Accession (Same CDS sequence) | NM_001130194.1 , XM_006530819.1 , XM_006530820.1 | |
Accession Version | NM_001130194.1 Latest version! | Documents for ORF clone product in default vector |
Sequence Information | ORF Nucleotide Sequence (Length: 1527bp) Protein sequence SNP |
|
Vector | pcDNA3.1-C-(k)DYK or customized vector | User Manual |
Clone information | Clone Map | MSDS |
Tag on pcDNA3.1+/C-(K)DYK | C terminal DYKDDDDK tags | |
ORF Insert Method | CloneEZ™ Seamless cloning technology | |
Insert Structure | linear | |
Update Date | 2019-12-26 | |
Organism | Mus musculus(house mouse) | |
Product | bestrophin-2 | |
Comment | Comment: VALIDATED REFSEQ: This record has undergone validation or preliminary review. The reference sequence was derived from AC163703.4, BY096795.1 and AY450428.1. Transcript Variant: This variant (1) encodes the functional protein. Sequence Note: This RefSeq record was created from transcript and genomic sequence data to make the sequence consistent with the reference genome assembly. The extent of this transcript is supported by transcript alignments. Publication Note: This RefSeq record includes a subset of the publications that are available for this gene. Please see the Gene record to access additional publications. ##Evidence-Data-START## Transcript exon combination :: BC036157.1 [ECO:0000332] RNAseq introns :: single sample supports all introns SAMN00849389 [ECO:0000348] ##Evidence-Data-END## COMPLETENESS: complete on the 3' end. |
1 | ATGACCGTCA CCTACACAGC CAGAGTGGCG AATGCCCGCT TCGGTGGCTT CTCGCAGCTG |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
RefSeq | NP_001123666.1 |
CDS | 86..1612 |
Translation |
Target ORF information:
Target ORF information:
|
NM_001130194.1 |
1 | ATGACCGTCA CCTACACAGC CAGAGTGGCG AATGCCCGCT TCGGTGGCTT CTCGCAGCTG |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
CloneID | OMu06096 | |
Clone ID Related Accession (Same CDS sequence) | NM_001130194.1 , XM_006530819.1 , XM_006530820.1 | |
Accession Version | XM_006530819.1 Latest version! | Documents for ORF clone product in default vector |
Sequence Information | ORF Nucleotide Sequence (Length: 1527bp) Protein sequence SNP |
|
Vector | pcDNA3.1-C-(k)DYK or customized vector | User Manual |
Clone information | Clone Map | MSDS |
Tag on pcDNA3.1+/C-(K)DYK | C terminal DYKDDDDK tags | |
ORF Insert Method | CloneEZ™ Seamless cloning technology | |
Insert Structure | linear | |
Update Date | 2015-02-08 | |
Organism | Mus musculus(House mouse) | |
Product | bestrophin-2 isoform X1 | |
Comment |
1 | ATGACCGTCA CCTACACAGC CAGAGTGGCG AATGCCCGCT TCGGTGGCTT CTCGCAGCTG |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
RefSeq | XP_006530882.1 |
Translation |
Target ORF information:
Target ORF information:
|
XM_006530819.1 |
1 | ATGACCGTCA CCTACACAGC CAGAGTGGCG AATGCCCGCT TCGGTGGCTT CTCGCAGCTG |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
CloneID | OMu06096 | |
Clone ID Related Accession (Same CDS sequence) | NM_001130194.1 , XM_006530819.1 , XM_006530820.1 | |
Accession Version | XM_006530820.1 Latest version! | Documents for ORF clone product in default vector |
Sequence Information | ORF Nucleotide Sequence (Length: 1527bp) Protein sequence SNP |
|
Vector | pcDNA3.1-C-(k)DYK or customized vector | User Manual |
Clone information | Clone Map | MSDS |
Tag on pcDNA3.1+/C-(K)DYK | C terminal DYKDDDDK tags | |
ORF Insert Method | CloneEZ™ Seamless cloning technology | |
Insert Structure | linear | |
Update Date | 2019-08-07 | |
Organism | Mus musculus(house mouse) | |
Product | bestrophin-2 isoform X1 | |
Comment | Comment: MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NC_000074.6) annotated using gene prediction method: Gnomon, supported by mRNA and EST evidence. Also see: Documentation of NCBI's Annotation Process ##Genome-Annotation-Data-START## Annotation Provider :: NCBI Annotation Status :: Full annotation Annotation Name :: Mus musculus Annotation Release 108 Annotation Version :: 108 Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline Annotation Software Version :: 8.2 Annotation Method :: Best-placed RefSeq; Gnomon Features Annotated :: Gene; mRNA; CDS; ncRNA ##Genome-Annotation-Data-END## |
1 | ATGACCGTCA CCTACACAGC CAGAGTGGCG AATGCCCGCT TCGGTGGCTT CTCGCAGCTG |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
RefSeq | XP_006530883.1 |
CDS | 220..1746 |
Translation |
Target ORF information:
Target ORF information:
|
XM_006530820.1 |
1 | ATGACCGTCA CCTACACAGC CAGAGTGGCG AATGCCCGCT TCGGTGGCTT CTCGCAGCTG |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
Store-operated Ca2+ entry regulates Ca2+-activated chloride channels and eccrine sweat gland function. |
Regulation of anterior chamber drainage by bicarbonate-sensitive soluble adenylyl cyclase in the ciliary body. |
Bestrophin-2 mediates bicarbonate transport by goblet cells in mouse colon. |
Tmem16A encodes the Ca2+-activated Cl- channel in mouse submandibular salivary gland acinar cells. |
Calcium-activated chloride currents in olfactory sensory neurons from mice lacking bestrophin-2. |