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Ybey cDNA ORF clone, Mus musculus(house mouse)

Summary

Gene Symbol Ybey
Entrez Gene ID 216119
Full Name ybeY metallopeptidase
Synonyms 1110068N23Rik,A130042E20Rik,C21orf57,ORF57,ORF66
General protein information
Preferred Names

ybeY metallopeptidase

Names

endoribonuclease YbeY
putative ribonuclease
putative metalloprotease C21orf57 homolog
rRNA maturation factor homolog
Gene Type protein-coding
Organism Mus musculus(house mouse)
Genome

10

10|10 C1

Reference Sequences (RefSeq)

mRNA and Protein(s)

mRNA Protein Name
NM_172550.4 NP_766138.3 endoribonuclease YbeY
XM_017313886.2 XP_017169375.1 endoribonuclease YbeY isoform X1
XM_017313886.1 XP_017169375.1 putative ribonuclease isoform X1

Pathways from BioSystems


Homologies


Bos taurus (cattle) YBEY NP_001070588.1
Rattus norvegicus (Norway rat) Ybey NP_001101999.1
Danio rerio (zebrafish) LOC100537917 XP_003201790.1
Xenopus tropicalis (tropical clawed frog) ybey XP_004917952.1
Homo sapiens (human) YBEY NP_478061.1
YBEY XP_002803146.1
Mus musculus (house mouse) Ybey NP_766138.3
Danio rerio (zebrafish) ybey NP_997759.1
Pan troglodytes (chimpanzee) YBEY XP_003319177.1
Canis lupus familiaris (dog) YBEY XP_005639078.1

Gene Ontology


Bibliography

Related articles in PubMed

A mutation in the pericentrin gene causes abnormal interneuron migration to the olfactory bulb in mice.
Endoh-Yamagami S, Karkar KM, May SR, Cobos I, Thwin MT, Long JE, Ashique AM, Zarbalis K, Rubenstein JL, Peterson AS
Developmental biology340(1)41-53(2010 Apr)

The European renal genome project: an integrated approach towards understanding the genetics of kidney development and disease.
Willnow T, Antignac C, Br?ndli A, Christensen E, Cox R, Davidson D, Davies J, Devuyst O, Eichele G, Hastie N, Verroust P, Schedl A, Meij I
Organogenesis2(2)42-7(2005 Apr)

Human chromosome 21 gene expression atlas in the mouse.
Reymond A, Marigo V, Yaylaoglu MB, Leoni A, Ucla C, Scamuffa N, Caccioppoli C, Dermitzakis ET, Lyle R, Banfi S, Eichele G, Antonarakis SE, Ballabio A
Nature420(6915)582-6(2002 Dec)

GeneRIFs: Gene References Into Functions What's a GeneRIF?

The following Ybey gene cDNA ORF clone sequences were retrieved from the NCBI Reference Sequence Database (RefSeq). These sequences represent the protein coding region of the Ybey cDNA ORF which is encoded by the open reading frame (ORF) sequence. ORF sequences can be delivered in our standard vector, pcDNA3.1+/C-(K)DYK or the vector of your choice as an expression/transfection-ready ORF clone. Not the clone you want? Click here to find your clone.

***CloneID Accession No. Definition **Vector *Turnaround time Price (USD) Select
OMu03666 NM_172550.4
Latest version!		 Mus musculus ybeY metallopeptidase (Ybey), mRNA. pcDNA3.1+/C-(K)DYK or customized vector 7-9 $69.30
$99.00
OMu77491 XM_017313886.2
Latest version!		 Mus musculus ybeY metallopeptidase (Ybey), transcript variant X1, mRNA. pcDNA3.1+/C-(K)DYK or customized vector 9-11 $69.30
$99.00
View Old Accession Versions >>
OMu77491 XM_017313886.1 Mus musculus ybeY metallopeptidase (Ybey), transcript variant X1, mRNA. pcDNA3.1+/C-(K)DYK or customized vector 9-11 $69.30
$99.00
Hide Old Accession Versions >>

ORF Online Only Promotion

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** You may select a custom vector to replace pcDNA3.1+/C-(K)DYK after clone is added to cart.

** GenScript guarantees 100% sequence accuracy of all synthetic DNA constructs we deliver, but we do not guarantee protein expression in your experimental system. Protein expression is influenced by many factors that may vary between experiments or laboratories. In addition, please pay attention to the signal peptide, propeptide and transit peptide in target ORF, which may affect the choice of vector (N/C terminal tag vector).

***One clone ID might be correlated to multiple accession numbers, which share the same CDS sequence.

Reference Sequences (Refseq)


CloneID OMu03666
Clone ID Related Accession (Same CDS sequence) NM_172550.4
Accession Version NM_172550.4 Latest version! Documents for ORF clone product in default vector
Sequence Information ORF Nucleotide Sequence (Length: 495bp)
Protein sequence
SNP
Vector pcDNA3.1+/C-(K)DYK or customized vector User Manual
Clone information Clone Map MSDS
Tag on pcDNA3.1+/C-(K)DYK C terminal DYKDDDDK tags
ORF Insert Method CloneEZ™ Seamless cloning technology
Insert Structure linear
Update Date 2019-09-20
Organism Mus musculus(house mouse)
Product endoribonuclease YbeY
Comment Comment: VALIDATED REFSEQ: This record has undergone validation or preliminary review. The reference sequence was derived from BC057308.1 and AK136543.1. On Sep 1, 2006 this sequence version replaced NM_172550.3. ##Evidence-Data-START## Transcript exon combination :: BC057308.1, AK037727.1 [ECO:0000332] RNAseq introns :: single sample supports all introns SAMN01164139 [ECO:0000348] ##Evidence-Data-END## COMPLETENESS: complete on the 3' end. 

1
61
121
181
241
301
361
421
481
ATGAGTTTGG TGATTAAAAA TCTGCAGCGG GTGGTCCCCA TCAGAAGAGT GCCACTTCGC 
AGGAAGATGG ATTTAGTCAG GAGTATCTTA GGAGTGAAGA AATTTGACCT GGGGATCATC 
TGTGTTGACA ACAAGACTAT TCAGAACATT AATAGGATCT ACAGGAATAA AAATGTCCCA 
ACTGACGTGC TTTCTTTCTC ATTTCATGAG AATCTGAAAG CTGGCGAATT TCCTCAGCCA 
CACTCACCGG ATGATTATAA TCTGGGAGAC ATTTTCCTAG GGGTGGAGTA CATTCTTCAG 
CATTGCAGAG AAAGTGAGGA TTACTGTGAT GTCCTGACGG TCACAGCCAC CCATGGACTC 
TGTCACCTGC TGGGCTTCAC CCACAGCTCC AAAGCCGAGT GGCAAAAGAT GTACAACCAG 
GAGAAGCTGG TGCTGGAGGA GCTGAGCCGC TACACGGGAG CTAGGCTCCA ACCCCTGAGC 
AGGGGCCTCT ACTGA

The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.

RefSeq NP_766138.3
CDS362..856
Translation

Target ORF information:

RefSeq Version NM_172550.4
Organism Mus musculus(house mouse)
Definition Mus musculus ybeY metallopeptidase (Ybey), mRNA.

Target ORF information:

Epitope DYKDDDDK
Bacterial selection AMPR
Mammalian selection NeoR
Vector pcDNA3.1+/C-(K)DYK
 NM_172550.4

ORF Insert Sequence:

1
61
121
181
241
301
361
421
481
ATGAGTTTGG TGATTAAAAA TCTGCAGCGG GTGGTCCCCA TCAGAAGAGT GCCACTTCGC 
AGGAAGATGG ATTTAGTCAG GAGTATCTTA GGAGTGAAGA AATTTGACCT GGGGATCATC 
TGTGTTGACA ACAAGACTAT TCAGAACATT AATAGGATCT ACAGGAATAA AAATGTCCCA 
ACTGACGTGC TTTCTTTCTC ATTTCATGAG AATCTGAAAG CTGGCGAATT TCCTCAGCCA 
CACTCACCGG ATGATTATAA TCTGGGAGAC ATTTTCCTAG GGGTGGAGTA CATTCTTCAG 
CATTGCAGAG AAAGTGAGGA TTACTGTGAT GTCCTGACGG TCACAGCCAC CCATGGACTC 
TGTCACCTGC TGGGCTTCAC CCACAGCTCC AAAGCCGAGT GGCAAAAGAT GTACAACCAG 
GAGAAGCTGG TGCTGGAGGA GCTGAGCCGC TACACGGGAG CTAGGCTCCA ACCCCTGAGC 
AGGGGCCTCT ACTGA

The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.

CloneID OMu77491
Clone ID Related Accession (Same CDS sequence) XM_017313886.2 , XM_017313886.1
Accession Version XM_017313886.2 Latest version! Documents for ORF clone product in default vector
Sequence Information ORF Nucleotide Sequence (Length: 432bp)
Protein sequence
SNP
Vector pcDNA3.1+/C-(K)DYK or customized vector User Manual
Clone information Clone Map MSDS
Tag on pcDNA3.1+/C-(K)DYK C terminal DYKDDDDK tags
ORF Insert Method CloneEZ™ Seamless cloning technology
Insert Structure linear
Update Date 2019-08-07
Organism Mus musculus(house mouse)
Product endoribonuclease YbeY isoform X1
Comment Comment: MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NC_000076.6) annotated using gene prediction method: Gnomon, supported by EST evidence. Also see: Documentation of NCBI's Annotation Process On Aug 8, 2019 this sequence version replaced XM_017313886.1. ##Genome-Annotation-Data-START## Annotation Provider :: NCBI Annotation Status :: Full annotation Annotation Name :: Mus musculus Annotation Release 108 Annotation Version :: 108 Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline Annotation Software Version :: 8.2 Annotation Method :: Best-placed RefSeq; Gnomon Features Annotated :: Gene; mRNA; CDS; ncRNA ##Genome-Annotation-Data-END## 

1
61
121
181
241
301
361
421
ATGAGTTTGG TGATTAAAAA TCTGCAGCGG GTGGTCCCCA TCAGAAGAGT GCCACTTCGC 
AGGAAGATGG ATTTAGTCAG GAGTATCTTA GGAGTGAAGA AATTTGACCT GGGGATCATC 
TGTGTTGACA ACAAGACTAT TCAGAACATT AATAGGATCT ACAGGAATAA AAATGTCCCA 
ACTGACGTGC TTTCTTTCTC ATTTCATGAG AATCTGAAAG CTGGCGAATT TCCTCAGCCA 
CACTCACCGG ATGATTATAA TCTGGGAGAC ATTTTCCTAG GGGTGGAGTA CATTCTTCAG 
CATTGCAGAG AAAGTGAGGA TTACTGTGAT GTCCTGACGG TCACAGCCAC CCATGGACTC 
TGTCACCTGC TGGGCTTCAC CCACAGCTCC AAAGCCGAGT GGCAAAAGCT CTCCGGGATG 
GACGCCTTCT GA

The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.

RefSeq XP_017169375.1
CDS132..563
Translation

Target ORF information:

RefSeq Version XM_017313886.2
Organism Mus musculus(house mouse)
Definition Mus musculus ybeY metallopeptidase (Ybey), transcript variant X1, mRNA.

Target ORF information:

Epitope DYKDDDDK
Bacterial selection AMPR
Mammalian selection NeoR
Vector pcDNA3.1+/C-(K)DYK
 XM_017313886.2

ORF Insert Sequence:

1
61
121
181
241
301
361
421
ATGAGTTTGG TGATTAAAAA TCTGCAGCGG GTGGTCCCCA TCAGAAGAGT GCCACTTCGC 
AGGAAGATGG ATTTAGTCAG GAGTATCTTA GGAGTGAAGA AATTTGACCT GGGGATCATC 
TGTGTTGACA ACAAGACTAT TCAGAACATT AATAGGATCT ACAGGAATAA AAATGTCCCA 
ACTGACGTGC TTTCTTTCTC ATTTCATGAG AATCTGAAAG CTGGCGAATT TCCTCAGCCA 
CACTCACCGG ATGATTATAA TCTGGGAGAC ATTTTCCTAG GGGTGGAGTA CATTCTTCAG 
CATTGCAGAG AAAGTGAGGA TTACTGTGAT GTCCTGACGG TCACAGCCAC CCATGGACTC 
TGTCACCTGC TGGGCTTCAC CCACAGCTCC AAAGCCGAGT GGCAAAAGCT CTCCGGGATG 
GACGCCTTCT GA

The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.

CloneID OMu77491
Clone ID Related Accession (Same CDS sequence) XM_017313886.2 , XM_017313886.1
Accession Version XM_017313886.1 Documents for ORF clone product in default vector
Sequence Information ORF Nucleotide Sequence (Length: 432bp)
Protein sequence
SNP
Vector pcDNA3.1+/C-(K)DYK or customized vector User Manual
Clone information Clone Map MSDS
Tag on pcDNA3.1+/C-(K)DYK C terminal DYKDDDDK tags
ORF Insert Method CloneEZ™ Seamless cloning technology
Insert Structure linear
Update Date 2016-06-21
Organism Mus musculus(house mouse)
Product putative ribonuclease isoform X1
Comment Comment: MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NC_000076.6) annotated using gene prediction method: Gnomon, supported by EST evidence. Also see: Documentation of NCBI's Annotation Process ##Genome-Annotation-Data-START## Annotation Provider :: NCBI Annotation Status :: Full annotation Annotation Version :: Mus musculus Annotation Release 106 Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline Annotation Software Version :: 7.1 Annotation Method :: Best-placed RefSeq; Gnomon Features Annotated :: Gene; mRNA; CDS; ncRNA ##Genome-Annotation-Data-END## 

1
61
121
181
241
301
361
421
ATGAGTTTGG TGATTAAAAA TCTGCAGCGG GTGGTCCCCA TCAGAAGAGT GCCACTTCGC 
AGGAAGATGG ATTTAGTCAG GAGTATCTTA GGAGTGAAGA AATTTGACCT GGGGATCATC 
TGTGTTGACA ACAAGACTAT TCAGAACATT AATAGGATCT ACAGGAATAA AAATGTCCCA 
ACTGACGTGC TTTCTTTCTC ATTTCATGAG AATCTGAAAG CTGGCGAATT TCCTCAGCCA 
CACTCACCGG ATGATTATAA TCTGGGAGAC ATTTTCCTAG GGGTGGAGTA CATTCTTCAG 
CATTGCAGAG AAAGTGAGGA TTACTGTGAT GTCCTGACGG TCACAGCCAC CCATGGACTC 
TGTCACCTGC TGGGCTTCAC CCACAGCTCC AAAGCCGAGT GGCAAAAGCT CTCCGGGATG 
GACGCCTTCT GA

The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.

RefSeq XP_017169375.1
CDS113..544
Translation

Target ORF information:

RefSeq Version XM_017313886.1
Organism Mus musculus(house mouse)
Definition Mus musculus ybeY metallopeptidase (Ybey), transcript variant X1, mRNA.

Target ORF information:

Epitope DYKDDDDK
Bacterial selection AMPR
Mammalian selection NeoR
Vector pcDNA3.1+/C-(K)DYK
 XM_017313886.1

ORF Insert Sequence:

1
61
121
181
241
301
361
421
ATGAGTTTGG TGATTAAAAA TCTGCAGCGG GTGGTCCCCA TCAGAAGAGT GCCACTTCGC 
AGGAAGATGG ATTTAGTCAG GAGTATCTTA GGAGTGAAGA AATTTGACCT GGGGATCATC 
TGTGTTGACA ACAAGACTAT TCAGAACATT AATAGGATCT ACAGGAATAA AAATGTCCCA 
ACTGACGTGC TTTCTTTCTC ATTTCATGAG AATCTGAAAG CTGGCGAATT TCCTCAGCCA 
CACTCACCGG ATGATTATAA TCTGGGAGAC ATTTTCCTAG GGGTGGAGTA CATTCTTCAG 
CATTGCAGAG AAAGTGAGGA TTACTGTGAT GTCCTGACGG TCACAGCCAC CCATGGACTC 
TGTCACCTGC TGGGCTTCAC CCACAGCTCC AAAGCCGAGT GGCAAAAGCT CTCCGGGATG 
GACGCCTTCT GA

The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.

PubMed

book

A mutation in the pericentrin gene causes abnormal interneuron migration to the olfactory bulb in mice.
Developmental biology340(1)41-53(2010 Apr)
Endoh-Yamagami S,Karkar KM,May SR,Cobos I,Thwin MT,Long JE,Ashique AM,Zarbalis K,Rubenstein JL,Peterson AS


book

The European renal genome project: an integrated approach towards understanding the genetics of kidney development and disease.
Organogenesis2(2)42-7(2005 Apr)
Willnow T,Antignac C,Br?ndli A,Christensen E,Cox R,Davidson D,Davies J,Devuyst O,Eichele G,Hastie N,Verroust P,Schedl A,Meij I


book

Human chromosome 21 gene expression atlas in the mouse.
Nature420(6915)582-6(2002 Dec)
Reymond A,Marigo V,Yaylaoglu MB,Leoni A,Ucla C,Scamuffa N,Caccioppoli C,Dermitzakis ET,Lyle R,Banfi S,Eichele G,Antonarakis SE,Ballabio A