Gene Symbol | Cfap36 |
Entrez Gene ID | 216618 |
Full Name | cilia and flagella associated protein 36 |
Synonyms | 2300003H10,4931428D14Rik,Ccdc104 |
General protein information |
|
Gene Type | protein-coding |
Organism | Mus musculus(house mouse) |
Genome |
ORF » Species Summary » Mus musculus » Cfap36 cDNA ORF clone
Gene Symbol | Cfap36 |
Entrez Gene ID | 216618 |
Full Name | cilia and flagella associated protein 36 |
Synonyms | 2300003H10,4931428D14Rik,Ccdc104 |
General protein information |
|
Gene Type | protein-coding |
Organism | Mus musculus(house mouse) |
Genome |
mRNA | Protein | Name |
---|---|---|
XM_030245800.1 | XP_030101660.1 | cilia- and flagella-associated protein 36 isoform X1 |
NM_025740.3 | NP_080016.1 | cilia- and flagella-associated protein 36 |
XM_017314441.1 | XP_017169930.1 | cilia- and flagella-associated protein 36 isoform X1 |
Mus musculus (house mouse) | Ccdc104 | NP_080016.1 |
Pan troglodytes (chimpanzee) | CCDC104 | XP_515488.3 |
Xenopus tropicalis (tropical clawed frog) | ccdc104 | NP_989091.2 |
Homo sapiens (human) | CCDC104 | NP_542398.3 |
Gallus gallus (chicken) | CCDC104 | NP_001186352.1 |
Canis lupus familiaris (dog) | CCDC104 | XP_531832.1 |
Bos taurus (cattle) | CCDC104 | NP_001029625.1 |
Rattus norvegicus (Norway rat) | Ccdc104 | NP_001020037.1 |
Danio rerio (zebrafish) | ccdc104 | NP_001035412.1 |
The Interaction of CCDC104/BARTL1 with Arl3 and Implications for Ciliary Function.
Lokaj M, K?sling SK, Koerner C, Lange SM, van Beersum SE, van Reeuwijk J, Roepman R, Horn N, Ueffing M, Boldt K, Wittinghofer A
Structure (London, England : 1993)23(11)2122-32(2015 Nov)
RAB-like 2 has an essential role in male fertility, sperm intra-flagellar transport, and tail assembly.
Lo JC, Jamsai D, O'Connor AE, Borg C, Clark BJ, Whisstock JC, Field MC, Adams V, Ishikawa T, Aitken RJ, Whittle B, Goodnow CC, Ormandy CJ, O'Bryan MK
PLoS genetics8(10)e1002969(2012)
Genomic analysis of mouse retinal development.
Blackshaw S, Harpavat S, Trimarchi J, Cai L, Huang H, Kuo WP, Weber G, Lee K, Fraioli RE, Cho SH, Yung R, Asch E, Ohno-Machado L, Wong WH, Cepko CL
PLoS biology2(9)E247(2004 Sep)
GeneRIFs: Gene References Into Functions What's a GeneRIF?
Complex structure shows Cfap36 binding to conserved LLxILxxL N-term motif of Arl3.
Title: The Interaction of CCDC104/BARTL1 with Arl3 and Implications for Ciliary Function.
The following Cfap36 gene cDNA ORF clone sequences were retrieved from the NCBI Reference Sequence Database (RefSeq). These sequences represent the protein coding region of the Cfap36 cDNA ORF which is encoded by the open reading frame (ORF) sequence. ORF sequences can be delivered in our standard vector, pcDNA3.1+/C-(K)DYK or the vector of your choice as an expression/transfection-ready ORF clone. Not the clone you want? Click here to find your clone.
CloneID | OMu18343 | |
Clone ID Related Accession (Same CDS sequence) | NM_025740.3 | |
Accession Version | NM_025740.3 Latest version! | Documents for ORF clone product in default vector |
Sequence Information | ORF Nucleotide Sequence (Length: 1032bp) Protein sequence SNP |
|
Vector | pcDNA3.1-C-(k)DYK or customized vector | User Manual |
Clone information | Clone Map | MSDS |
Tag on pcDNA3.1+/C-(K)DYK | C terminal DYKDDDDK tags | |
ORF Insert Method | CloneEZ™ Seamless cloning technology | |
Insert Structure | linear | |
Update Date | 2019-12-27 | |
Organism | Mus musculus(house mouse) | |
Product | cilia- and flagella-associated protein 36 | |
Comment | Comment: PROVISIONAL REFSEQ: This record has not yet been subject to final NCBI review. The reference sequence was derived from AL935054.11 and BX294116.3. On Apr 29, 2007 this sequence version replaced NM_025740.2. Sequence Note: The RefSeq transcript and protein were derived from genomic sequence to make the sequence consistent with the reference genome assembly. The genomic coordinates used for the transcript record were based on alignments. ##Evidence-Data-START## Transcript exon combination :: AK075858.1, SRR1660813.226846.1 [ECO:0000332] RNAseq introns :: single sample supports all introns SAMN01164139, SAMN01164143 [ECO:0000348] ##Evidence-Data-END## |
1 | ATGGCTGCGG AAGAAGAGGA CGAAGTGGAA TGGGTGGTGG AGAGCATCGC TGGGTTCCTG |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
RefSeq | NP_080016.1 |
CDS | 144..1175 |
Translation |
Target ORF information:
Target ORF information:
|
NM_025740.3 |
1 | ATGGCTGCGG AAGAAGAGGA CGAAGTGGAA TGGGTGGTGG AGAGCATCGC TGGGTTCCTG |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
CloneID | OMu72979 | |
Clone ID Related Accession (Same CDS sequence) | XM_030245800.1 , XM_017314441.1 | |
Accession Version | XM_017314441.1 Latest version! | Documents for ORF clone product in default vector |
Sequence Information | ORF Nucleotide Sequence (Length: 573bp) Protein sequence SNP |
|
Vector | pcDNA3.1-C-(k)DYK or customized vector | User Manual |
Clone information | Clone Map | MSDS |
Tag on pcDNA3.1+/C-(K)DYK | C terminal DYKDDDDK tags | |
ORF Insert Method | CloneEZ™ Seamless cloning technology | |
Insert Structure | linear | |
Update Date | 2016-06-21 | |
Organism | Mus musculus(house mouse) | |
Product | cilia- and flagella-associated protein 36 isoform X1 | |
Comment | Comment: MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NC_000077.6) annotated using gene prediction method: Gnomon, supported by EST evidence. Also see: Documentation of NCBI's Annotation Process ##Genome-Annotation-Data-START## Annotation Provider :: NCBI Annotation Status :: Full annotation Annotation Version :: Mus musculus Annotation Release 106 Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline Annotation Software Version :: 7.1 Annotation Method :: Best-placed RefSeq; Gnomon Features Annotated :: Gene; mRNA; CDS; ncRNA ##Genome-Annotation-Data-END## |
1 | ATGAAAATTC TAAGAGAGGT CCTCAGAAAA TCAAAAGAAG AATATGACCA GGAGGAAGAA |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
RefSeq | XP_017169930.1 |
CDS | 230..802 |
Translation |
Target ORF information:
Target ORF information:
|
XM_017314441.1 |
1 | ATGAAAATTC TAAGAGAGGT CCTCAGAAAA TCAAAAGAAG AATATGACCA GGAGGAAGAA |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
CloneID | OMu72979 | |
Clone ID Related Accession (Same CDS sequence) | XM_030245800.1 , XM_017314441.1 | |
Accession Version | XM_030245800.1 Latest version! | Documents for ORF clone product in default vector |
Sequence Information | ORF Nucleotide Sequence (Length: 573bp) Protein sequence SNP |
|
Vector | pcDNA3.1-C-(k)DYK or customized vector | User Manual |
Clone information | Clone Map | MSDS |
Tag on pcDNA3.1+/C-(K)DYK | C terminal DYKDDDDK tags | |
ORF Insert Method | CloneEZ™ Seamless cloning technology | |
Insert Structure | linear | |
Update Date | 2019-08-07 | |
Organism | Mus musculus(house mouse) | |
Product | cilia- and flagella-associated protein 36 isoform X1 | |
Comment | Comment: MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NC_000077.6) annotated using gene prediction method: Gnomon, supported by mRNA and EST evidence. Also see: Documentation of NCBI's Annotation Process ##Genome-Annotation-Data-START## Annotation Provider :: NCBI Annotation Status :: Full annotation Annotation Name :: Mus musculus Annotation Release 108 Annotation Version :: 108 Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline Annotation Software Version :: 8.2 Annotation Method :: Best-placed RefSeq; Gnomon Features Annotated :: Gene; mRNA; CDS; ncRNA ##Genome-Annotation-Data-END## |
1 | ATGAAAATTC TAAGAGAGGT CCTCAGAAAA TCAAAAGAAG AATATGACCA GGAGGAAGAA |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
RefSeq | XP_030101660.1 |
CDS | 533..1105 |
Translation |
Target ORF information:
Target ORF information:
|
XM_030245800.1 |
1 | ATGAAAATTC TAAGAGAGGT CCTCAGAAAA TCAAAAGAAG AATATGACCA GGAGGAAGAA |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
The Interaction of CCDC104/BARTL1 with Arl3 and Implications for Ciliary Function. |
RAB-like 2 has an essential role in male fertility, sperm intra-flagellar transport, and tail assembly. |
Genomic analysis of mouse retinal development. |