Gene Symbol | Usp12 |
Entrez Gene ID | 22217 |
Full Name | ubiquitin specific peptidase 12 |
Synonyms | Ubh1 |
General protein information |
|
Gene Type | protein-coding |
Organism | Mus musculus(house mouse) |
Genome |
ORF » Species Summary » Mus musculus » Usp12 cDNA ORF clone
gRNAs
Gene Symbol | Usp12 |
Entrez Gene ID | 22217 |
Full Name | ubiquitin specific peptidase 12 |
Synonyms | Ubh1 |
General protein information |
|
Gene Type | protein-coding |
Organism | Mus musculus(house mouse) |
Genome |
mRNA | Protein | Name |
---|---|---|
XM_030254365.1 | XP_030110225.1 | ubiquitin carboxyl-terminal hydrolase 12 isoform X1 |
XM_006504819.3 | XP_006504882.1 | ubiquitin carboxyl-terminal hydrolase 12 isoform X2 |
XM_006504818.2 | XP_006504881.1 | ubiquitin carboxyl-terminal hydrolase 12 isoform X1 |
NM_011669.3 | NP_035799.1 | ubiquitin carboxyl-terminal hydrolase 12 |
Homo sapiens (human) | USP12 | NP_872294.2 |
Bos taurus (cattle) | USP12 | NP_001091528.1 |
Rattus norvegicus (Norway rat) | Usp12 | NP_001160048.1 |
Schizosaccharomyces pombe (fission yeast) | ubp9 | NP_596207.1 |
Pan troglodytes (chimpanzee) | USP12 | XP_001135418.2 |
Canis lupus familiaris (dog) | USP12 | XP_543159.2 |
Mus musculus (house mouse) | Usp12 | NP_035799.1 |
Gallus gallus (chicken) | USP12 | XP_004938833.1 |
Oryza sativa (rice) | Os03g0190800 | NP_001049228.1 |
Danio rerio (zebrafish) | usp12a | NP_001077025.1 |
Xenopus tropicalis (tropical clawed frog) | LOC100494517 | XP_002941584.2 |
Neurospora crassa | NCU08378 | XP_965281.2 |
LOC721611 | XP_001117796.2 | |
Magnaporthe oryzae (rice blast fungus) | MGG_09907 | XP_003710004.1 |
Deubiquitinase USP12 promotes LPS induced macrophage responses through inhibition of I?B?.
Nayak TKS, Alamuru-Yellapragada NP, Parsa KVL
Biochemical and biophysical research communications483(1)69-74(2017 01)
High-throughput discovery of novel developmental phenotypes.
Dickinson ME, Flenniken AM, Ji X, Teboul L, Wong MD, White JK, Meehan TF, Weninger WJ, Westerberg H, Adissu H, Baker CN, Bower L, Brown JM, Caddle LB, Chiani F, Clary D, Cleak J, Daly MJ, Denegre JM, Doe B, Dolan ME, Edie SM, Fuchs H, Gailus-Durner V, Galli A, Gambadoro A, Gallegos J, Guo S, Horner NR, Hsu CW, Johnson SJ, Kalaga S, Keith LC, Lanoue L, Lawson TN, Lek M, Mark M, Marschall S, Mason J, McElwee ML, Newbigging S, Nutter LM, Peterson KA, Ramirez-Solis R, Rowland DJ, Ryder E, Samocha KE, Seavitt JR, Selloum M, Szoke-Kovacs Z, Tamura M, Trainor AG, Tudose I, Wakana S, Warren J, Wendling O, West DB, Wong L, Yoshiki A, , , , , , , , , MacArthur DG, Tocchini-Valentini GP, Gao X, Flicek P, Bradley A, Skarnes WC, Justice MJ, Parkinson HE, Moore M, Wells S, Braun RE, Svenson KL, de Angelis MH, Herault Y, Mohun T, Mallon AM, Henkelman RM, Brown SD, Adams DJ, Lloyd KC, McKerlie C, Beaudet AL, Bu?an M, Murray SA
Nature537(7621)508-514(2016 09)
Usp12 stabilizes the T-cell receptor complex at the cell surface during signaling.
Jahan AS, Lestra M, Swee LK, Fan Y, Lamers MM, Tafesse FG, Theile CS, Spooner E, Bruzzone R, Ploegh HL, Sanyal S
Proceedings of the National Academy of Sciences of the United States of America113(6)E705-14(2016 Feb)
The International Mouse Phenotyping Consortium Web Portal, a unified point of access for knockout mice and related phenotyping data.
Koscielny G, Yaikhom G, Iyer V, Meehan TF, Morgan H, Atienza-Herrero J, Blake A, Chen CK, Easty R, Di Fenza A, Fiegel T, Grifiths M, Horne A, Karp NA, Kurbatova N, Mason JC, Matthews P, Oakley DJ, Qazi A, Regnart J, Retha A, Santos LA, Sneddon DJ, Warren J, Westerberg H, Wilson RJ, Melvin DG, Smedley D, Brown SD, Flicek P, Skarnes WC, Mallon AM, Parkinson H
Nucleic acids research42(Database issue)D802-9(2014 Jan)
Characterization of an exchangeable gene trap using pU-17 carrying a stop codon-beta geo cassette.
Taniwaki T, Haruna K, Nakamura H, Sekimoto T, Oike Y, Imaizumi T, Saito F, Muta M, Soejima Y, Utoh A, Nakagata N, Araki M, Yamamura K, Araki K
Development, growth & differentiation47(3)163-72(2005 Apr)
GeneRIFs: Gene References Into Functions What's a GeneRIF?
Mechanistic analysis suggest that USP12 may be required for the activation of NFkappaB pathway as knockdown of USP12 reduced the inhibitory phosphorylation of IkappaBalpha, a well characterized inhibitor of NFkappaB nuclear translocation.
Title: Deubiquitinase USP12 promotes LPS induced macrophage responses through inhibition of I?B?.
Product has deubiquitinating enzyme activity and sequence analysis showed 98.3% amino acid identity with human UBH1.
Title: Molecular cloning and complete cDNA sequence of UBH1 in mouse testis.
The following Usp12 gene cDNA ORF clone sequences were retrieved from the NCBI Reference Sequence Database (RefSeq). These sequences represent the protein coding region of the Usp12 cDNA ORF which is encoded by the open reading frame (ORF) sequence. ORF sequences can be delivered in our standard vector, pcDNA3.1+/C-(K)DYK or the vector of your choice as an expression/transfection-ready ORF clone. Not the clone you want? Click here to find your clone.
CloneID | OMu36391 | |
Clone ID Related Accession (Same CDS sequence) | XM_030254365.1 , XM_006504818.2 | |
Accession Version | XM_006504818.2 Latest version! | Documents for ORF clone product in default vector |
Sequence Information | ORF Nucleotide Sequence (Length: 753bp) Protein sequence SNP |
|
Vector | pcDNA3.1-C-(k)DYK or customized vector | ![]() |
Clone information | Clone Map | ![]() |
Tag on pcDNA3.1+/C-(K)DYK | C terminal DYKDDDDK tags | |
ORF Insert Method | CloneEZ™ Seamless cloning technology | |
Insert Structure | linear | |
Update Date | 2016-06-21 | |
Organism | Mus musculus(house mouse) | |
Product | ubiquitin carboxyl-terminal hydrolase 12 isoform X1 | |
Comment | Comment: MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NC_000071.6) annotated using gene prediction method: Gnomon, supported by mRNA and EST evidence. Also see: Documentation of NCBI's Annotation Process On Jun 22, 2016 this sequence version replaced XM_006504818.1. ##Genome-Annotation-Data-START## Annotation Provider :: NCBI Annotation Status :: Full annotation Annotation Version :: Mus musculus Annotation Release 106 Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline Annotation Software Version :: 7.1 Annotation Method :: Best-placed RefSeq; Gnomon Features Annotated :: Gene; mRNA; CDS; ncRNA ##Genome-Annotation-Data-END## |
1 | ATGCAACAAG ATGCCCATGA ATTCTTAAAT TACCTACTCA ATACAATTGC TGATATTCTA |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
RefSeq | XP_006504881.1 |
CDS | 100..852 |
Translation |
Target ORF information:
Target ORF information:
|
![]() |
1 | ATGCAACAAG ATGCCCATGA ATTCTTAAAT TACCTACTCA ATACAATTGC TGATATTCTA |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
CloneID | OMu36392 | |
Clone ID Related Accession (Same CDS sequence) | XM_006504819.3 | |
Accession Version | XM_006504819.3 Latest version! | Documents for ORF clone product in default vector |
Sequence Information | ORF Nucleotide Sequence (Length: 687bp) Protein sequence SNP |
|
Vector | pcDNA3.1-C-(k)DYK or customized vector | ![]() |
Clone information | Clone Map | ![]() |
Tag on pcDNA3.1+/C-(K)DYK | C terminal DYKDDDDK tags | |
ORF Insert Method | CloneEZ™ Seamless cloning technology | |
Insert Structure | linear | |
Update Date | 2019-08-07 | |
Organism | Mus musculus(house mouse) | |
Product | ubiquitin carboxyl-terminal hydrolase 12 isoform X2 | |
Comment | Comment: MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NC_000071.6) annotated using gene prediction method: Gnomon, supported by EST evidence. Also see: Documentation of NCBI's Annotation Process On Jun 22, 2016 this sequence version replaced XM_006504819.2. ##Genome-Annotation-Data-START## Annotation Provider :: NCBI Annotation Status :: Full annotation Annotation Name :: Mus musculus Annotation Release 108 Annotation Version :: 108 Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline Annotation Software Version :: 8.2 Annotation Method :: Best-placed RefSeq; Gnomon Features Annotated :: Gene; mRNA; CDS; ncRNA ##Genome-Annotation-Data-END## |
1 | ATGGAAATCC TAATGACAGT CTCCAAATTC GCCTCCATCT GTACCATGGG CGCCAATGCC |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
RefSeq | XP_006504882.1 |
CDS | 290..976 |
Translation |
Target ORF information:
Target ORF information:
|
![]() |
1 | ATGGAAATCC TAATGACAGT CTCCAAATTC GCCTCCATCT GTACCATGGG CGCCAATGCC |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
CloneID | OMu08580 | |
Clone ID Related Accession (Same CDS sequence) | NM_011669.3 | |
Accession Version | NM_011669.3 Latest version! | Documents for ORF clone product in default vector |
Sequence Information | ORF Nucleotide Sequence (Length: 1113bp) Protein sequence SNP |
|
Vector | pcDNA3.1-C-(k)DYK or customized vector | ![]() |
Clone information | Clone Map | ![]() |
Tag on pcDNA3.1+/C-(K)DYK | C terminal DYKDDDDK tags | |
ORF Insert Method | CloneEZ™ Seamless cloning technology | |
Insert Structure | linear | |
Update Date | 2019-02-22 | |
Organism | Mus musculus(house mouse) | |
Product | ubiquitin carboxyl-terminal hydrolase 12 | |
Comment | Comment: PROVISIONAL REFSEQ: This record has not yet been subject to final NCBI review. The reference sequence was derived from AC124828.14 and AC127589.4. On Nov 17, 2006 this sequence version replaced NM_011669.2. Sequence Note: The RefSeq transcript and protein were derived from genomic sequence to make the sequence consistent with the reference genome assembly. The genomic coordinates used for the transcript record were based on alignments. ##Evidence-Data-START## Transcript exon combination :: BC068136.1, AK035629.1 [ECO:0000332] RNAseq introns :: single sample supports all introns SAMN01164142 [ECO:0000348] ##Evidence-Data-END## |
1 | ATGGAAATCC TAATGACAGT CTCCAAATTC GCCTCCATCT GTACCATGGG CGCCAATGCC |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
RefSeq | NP_035799.1 |
CDS | 295..1407 |
Translation |
Target ORF information:
Target ORF information:
|
![]() |
1 | ATGGAAATCC TAATGACAGT CTCCAAATTC GCCTCCATCT GTACCATGGG CGCCAATGCC |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
CloneID | OMu36391 | |
Clone ID Related Accession (Same CDS sequence) | XM_030254365.1 , XM_006504818.2 | |
Accession Version | XM_030254365.1 Latest version! | Documents for ORF clone product in default vector |
Sequence Information | ORF Nucleotide Sequence (Length: 753bp) Protein sequence SNP |
|
Vector | pcDNA3.1-C-(k)DYK or customized vector | ![]() |
Clone information | Clone Map | ![]() |
Tag on pcDNA3.1+/C-(K)DYK | C terminal DYKDDDDK tags | |
ORF Insert Method | CloneEZ™ Seamless cloning technology | |
Insert Structure | linear | |
Update Date | 2019-08-07 | |
Organism | Mus musculus(house mouse) | |
Product | ubiquitin carboxyl-terminal hydrolase 12 isoform X1 | |
Comment | Comment: MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NC_000071.6) annotated using gene prediction method: Gnomon, supported by mRNA and EST evidence. Also see: Documentation of NCBI's Annotation Process ##Genome-Annotation-Data-START## Annotation Provider :: NCBI Annotation Status :: Full annotation Annotation Name :: Mus musculus Annotation Release 108 Annotation Version :: 108 Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline Annotation Software Version :: 8.2 Annotation Method :: Best-placed RefSeq; Gnomon Features Annotated :: Gene; mRNA; CDS; ncRNA ##Genome-Annotation-Data-END## |
1 | ATGCAACAAG ATGCCCATGA ATTCTTAAAT TACCTACTCA ATACAATTGC TGATATTCTA |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
RefSeq | XP_030110225.1 |
CDS | 349..1101 |
Translation |
Target ORF information:
Target ORF information:
|
![]() |
1 | ATGCAACAAG ATGCCCATGA ATTCTTAAAT TACCTACTCA ATACAATTGC TGATATTCTA |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
Deubiquitinase USP12 promotes LPS induced macrophage responses through inhibition of I?B?. |
High-throughput discovery of novel developmental phenotypes. |
Usp12 stabilizes the T-cell receptor complex at the cell surface during signaling. |
The International Mouse Phenotyping Consortium Web Portal, a unified point of access for knockout mice and related phenotyping data. |
Characterization of an exchangeable gene trap using pU-17 carrying a stop codon-beta geo cassette. |