Gene Symbol | Ciart |
Entrez Gene ID | 229599 |
Full Name | circadian associated repressor of transcription |
Synonyms | Chrono,Gm129 |
General protein information |
|
Gene Type | protein-coding |
Organism | Mus musculus(house mouse) |
Genome |
ORF » Species Summary » Mus musculus » Ciart cDNA ORF clone
Gene Symbol | Ciart |
Entrez Gene ID | 229599 |
Full Name | circadian associated repressor of transcription |
Synonyms | Chrono,Gm129 |
General protein information |
|
Gene Type | protein-coding |
Organism | Mus musculus(house mouse) |
Genome |
mRNA | Protein | Name |
---|---|---|
XM_006501374.3 | XP_006501437.1 | circadian-associated transcriptional repressor isoform X1 |
XM_006501375.3 | XP_006501438.1 | circadian-associated transcriptional repressor isoform X1 |
NM_001033302.2 | NP_001028474.1 | circadian-associated transcriptional repressor |
XM_011240094.2 | XP_011238396.1 | circadian-associated transcriptional repressor isoform X2 |
XM_006501374.4 | XP_006501437.1 | circadian-associated transcriptional repressor isoform X1 |
XM_030252581.1 | XP_030108441.1 | circadian-associated transcriptional repressor isoform X2 |
Machine learning helps identify CHRONO as a circadian clock component.
Anafi RC, Lee Y, Sato TK, Venkataraman A, Ramanathan C, Kavakli IH, Hughes ME, Baggs JE, Growe J, Liu AC, Kim J, Hogenesch JB
PLoS biology12(4)e1001840(2014 Apr)
A novel protein, CHRONO, functions as a core component of the mammalian circadian clock.
Goriki A, Hatanaka F, Myung J, Kim JK, Yoritaka T, Tanoue S, Abe T, Kiyonari H, Fujimoto K, Kato Y, Todo T, Matsubara A, Forger D, Takumi T
PLoS biology12(4)e1001839(2014 Apr)
Gene model 129 (Gm129) encodes a novel transcriptional repressor that modulates circadian gene expression.
Annayev Y, Adar S, Chiou YY, Lieb JD, Sancar A, Ye R
The Journal of biological chemistry289(8)5013-24(2014 Feb)
A catalogue of genes in mouse embryonal carcinoma F9 cells identified with expressed sequence tags.
Nishiguchi S, Sakuma R, Nomura M, Zou Z, Jearanaisilavong J, Joh T, Yasunaga T, Shimada K
Journal of biochemistry119(4)749-67(1996 Apr)
GeneRIFs: Gene References Into Functions What's a GeneRIF?
CHRONO interferes with the ability of BMAL1 to recruit CBP, a bona fide histone acetylase and key transcriptional coactivator of the circadian clock.
Title: Machine learning helps identify CHRONO as a circadian clock component.
Chrono binds to the regulatory region of clock genes and its occupancy oscillates in a circadian manner.
Title: A novel protein, CHRONO, functions as a core component of the mammalian circadian clock.
The GM129 protein contributes to the transcriptional feedback loop by modulating CLOCK.BMAL1 activity as a transcriptional repressor.
Title: Gene model 129 (Gm129) encodes a novel transcriptional repressor that modulates circadian gene expression.
The following Ciart gene cDNA ORF clone sequences were retrieved from the NCBI Reference Sequence Database (RefSeq). These sequences represent the protein coding region of the Ciart cDNA ORF which is encoded by the open reading frame (ORF) sequence. ORF sequences can be delivered in our standard vector, pcDNA3.1+/C-(K)DYK or the vector of your choice as an expression/transfection-ready ORF clone. Not the clone you want? Click here to find your clone.
CloneID | OMu23614 | |
Clone ID Related Accession (Same CDS sequence) | XM_006501374.3 , XM_006501375.3 , NM_001033302.2 , XM_006501374.4 | |
Accession Version | NM_001033302.2 Latest version! | Documents for ORF clone product in default vector |
Sequence Information | ORF Nucleotide Sequence (Length: 1128bp) Protein sequence SNP |
|
Vector | pcDNA3.1-C-(k)DYK or customized vector | User Manual |
Clone information | Clone Map | MSDS |
Tag on pcDNA3.1+/C-(K)DYK | C terminal DYKDDDDK tags | |
ORF Insert Method | CloneEZ™ Seamless cloning technology | |
Insert Structure | linear | |
Update Date | 2019-09-20 | |
Organism | Mus musculus(house mouse) | |
Product | circadian-associated transcriptional repressor | |
Comment | Comment: PROVISIONAL REFSEQ: This record has not yet been subject to final NCBI review. The reference sequence was derived from AK164001.1. On May 29, 2009 this sequence version replaced NM_001033302.1. ##Evidence-Data-START## Transcript exon combination :: AK164001.1, SRR1660817.403733.1 [ECO:0000332] RNAseq introns :: single sample supports all introns SAMN00849384, SAMN00849390 [ECO:0000348] ##Evidence-Data-END## |
1 | ATGGATTCTC CATCTAGTGT TTCTTCTTAT TCCTCCTCCT CCCTCTCCCC ATCATTTTCC |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
RefSeq | NP_001028474.1 |
CDS | 139..1266 |
Translation |
Target ORF information:
Target ORF information:
|
NM_001033302.2 |
1 | ATGGATTCTC CATCTAGTGT TTCTTCTTAT TCCTCCTCCT CCCTCTCCCC ATCATTTTCC |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
CloneID | OMu23614 | |
Clone ID Related Accession (Same CDS sequence) | XM_006501374.3 , XM_006501375.3 , NM_001033302.2 , XM_006501374.4 | |
Accession Version | XM_006501374.3 | Documents for ORF clone product in default vector |
Sequence Information | ORF Nucleotide Sequence (Length: 1128bp) Protein sequence SNP |
|
Vector | pcDNA3.1-C-(k)DYK or customized vector | User Manual |
Clone information | Clone Map | MSDS |
Tag on pcDNA3.1+/C-(K)DYK | C terminal DYKDDDDK tags | |
ORF Insert Method | CloneEZ™ Seamless cloning technology | |
Insert Structure | linear | |
Update Date | 2016-06-21 | |
Organism | Mus musculus(house mouse) | |
Product | circadian-associated transcriptional repressor isoform X1 | |
Comment | Comment: MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NC_000069.6) annotated using gene prediction method: Gnomon, supported by mRNA and EST evidence. Also see: Documentation of NCBI's Annotation Process On Jun 22, 2016 this sequence version replaced XM_006501374.2. ##Genome-Annotation-Data-START## Annotation Provider :: NCBI Annotation Status :: Full annotation Annotation Version :: Mus musculus Annotation Release 106 Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline Annotation Software Version :: 7.1 Annotation Method :: Best-placed RefSeq; Gnomon Features Annotated :: Gene; mRNA; CDS; ncRNA ##Genome-Annotation-Data-END## |
1 | ATGGATTCTC CATCTAGTGT TTCTTCTTAT TCCTCCTCCT CCCTCTCCCC ATCATTTTCC |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
RefSeq | XP_006501437.1 |
CDS | 353..1480 |
Translation |
Target ORF information:
Target ORF information:
|
XM_006501374.3 |
1 | ATGGATTCTC CATCTAGTGT TTCTTCTTAT TCCTCCTCCT CCCTCTCCCC ATCATTTTCC |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
CloneID | OMu23614 | |
Clone ID Related Accession (Same CDS sequence) | XM_006501374.3 , XM_006501375.3 , NM_001033302.2 , XM_006501374.4 | |
Accession Version | XM_006501375.3 Latest version! | Documents for ORF clone product in default vector |
Sequence Information | ORF Nucleotide Sequence (Length: 1128bp) Protein sequence SNP |
|
Vector | pcDNA3.1-C-(k)DYK or customized vector | User Manual |
Clone information | Clone Map | MSDS |
Tag on pcDNA3.1+/C-(K)DYK | C terminal DYKDDDDK tags | |
ORF Insert Method | CloneEZ™ Seamless cloning technology | |
Insert Structure | linear | |
Update Date | 2016-06-21 | |
Organism | Mus musculus(house mouse) | |
Product | circadian-associated transcriptional repressor isoform X1 | |
Comment | Comment: MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NC_000069.6) annotated using gene prediction method: Gnomon, supported by mRNA and EST evidence. Also see: Documentation of NCBI's Annotation Process On Jun 22, 2016 this sequence version replaced XM_006501375.2. ##Genome-Annotation-Data-START## Annotation Provider :: NCBI Annotation Status :: Full annotation Annotation Version :: Mus musculus Annotation Release 106 Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline Annotation Software Version :: 7.1 Annotation Method :: Best-placed RefSeq; Gnomon Features Annotated :: Gene; mRNA; CDS; ncRNA ##Genome-Annotation-Data-END## |
1 | ATGGATTCTC CATCTAGTGT TTCTTCTTAT TCCTCCTCCT CCCTCTCCCC ATCATTTTCC |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
RefSeq | XP_006501438.1 |
CDS | 614..1741 |
Translation |
Target ORF information:
Target ORF information:
|
XM_006501375.3 |
1 | ATGGATTCTC CATCTAGTGT TTCTTCTTAT TCCTCCTCCT CCCTCTCCCC ATCATTTTCC |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
CloneID | OMu73469 | |
Clone ID Related Accession (Same CDS sequence) | XM_011240094.2 , XM_030252581.1 | |
Accession Version | XM_011240094.2 Latest version! | Documents for ORF clone product in default vector |
Sequence Information | ORF Nucleotide Sequence (Length: 627bp) Protein sequence SNP |
|
Vector | pcDNA3.1-C-(k)DYK or customized vector | User Manual |
Clone information | Clone Map | MSDS |
Tag on pcDNA3.1+/C-(K)DYK | C terminal DYKDDDDK tags | |
ORF Insert Method | CloneEZ™ Seamless cloning technology | |
Insert Structure | linear | |
Update Date | 2016-06-21 | |
Organism | Mus musculus(house mouse) | |
Product | circadian-associated transcriptional repressor isoform X2 | |
Comment | Comment: MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NC_000069.6) annotated using gene prediction method: Gnomon, supported by EST evidence. Also see: Documentation of NCBI's Annotation Process On Jun 22, 2016 this sequence version replaced XM_011240094.1. ##Genome-Annotation-Data-START## Annotation Provider :: NCBI Annotation Status :: Full annotation Annotation Version :: Mus musculus Annotation Release 106 Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline Annotation Software Version :: 7.1 Annotation Method :: Best-placed RefSeq; Gnomon Features Annotated :: Gene; mRNA; CDS; ncRNA ##Genome-Annotation-Data-END## |
1 | ATGGATTCTC CATCTAGTGT TTCTTCTTAT TCCTCCTCCT CCCTCTCCCC ATCATTTTCC |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
RefSeq | XP_011238396.1 |
CDS | 718..1344 |
Translation |
Target ORF information:
Target ORF information:
|
XM_011240094.2 |
1 | ATGGATTCTC CATCTAGTGT TTCTTCTTAT TCCTCCTCCT CCCTCTCCCC ATCATTTTCC |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
CloneID | OMu23614 | |
Clone ID Related Accession (Same CDS sequence) | XM_006501374.3 , XM_006501375.3 , NM_001033302.2 , XM_006501374.4 | |
Accession Version | XM_006501374.4 Latest version! | Documents for ORF clone product in default vector |
Sequence Information | ORF Nucleotide Sequence (Length: 1128bp) Protein sequence SNP |
|
Vector | pcDNA3.1-C-(k)DYK or customized vector | User Manual |
Clone information | Clone Map | MSDS |
Tag on pcDNA3.1+/C-(K)DYK | C terminal DYKDDDDK tags | |
ORF Insert Method | CloneEZ™ Seamless cloning technology | |
Insert Structure | linear | |
Update Date | 2019-08-07 | |
Organism | Mus musculus(house mouse) | |
Product | circadian-associated transcriptional repressor isoform X1 | |
Comment | Comment: MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NC_000069.6) annotated using gene prediction method: Gnomon, supported by mRNA and EST evidence. Also see: Documentation of NCBI's Annotation Process On Aug 8, 2019 this sequence version replaced XM_006501374.3. ##Genome-Annotation-Data-START## Annotation Provider :: NCBI Annotation Status :: Full annotation Annotation Name :: Mus musculus Annotation Release 108 Annotation Version :: 108 Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline Annotation Software Version :: 8.2 Annotation Method :: Best-placed RefSeq; Gnomon Features Annotated :: Gene; mRNA; CDS; ncRNA ##Genome-Annotation-Data-END## |
1 | ATGGATTCTC CATCTAGTGT TTCTTCTTAT TCCTCCTCCT CCCTCTCCCC ATCATTTTCC |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
RefSeq | XP_006501437.1 |
CDS | 267..1394 |
Translation |
Target ORF information:
Target ORF information:
|
XM_006501374.4 |
1 | ATGGATTCTC CATCTAGTGT TTCTTCTTAT TCCTCCTCCT CCCTCTCCCC ATCATTTTCC |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
CloneID | OMu73469 | |
Clone ID Related Accession (Same CDS sequence) | XM_011240094.2 , XM_030252581.1 | |
Accession Version | XM_030252581.1 Latest version! | Documents for ORF clone product in default vector |
Sequence Information | ORF Nucleotide Sequence (Length: 627bp) Protein sequence SNP |
|
Vector | pcDNA3.1-C-(k)DYK or customized vector | User Manual |
Clone information | Clone Map | MSDS |
Tag on pcDNA3.1+/C-(K)DYK | C terminal DYKDDDDK tags | |
ORF Insert Method | CloneEZ™ Seamless cloning technology | |
Insert Structure | linear | |
Update Date | 2019-08-07 | |
Organism | Mus musculus(house mouse) | |
Product | circadian-associated transcriptional repressor isoform X2 | |
Comment | Comment: MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NC_000069.6) annotated using gene prediction method: Gnomon, supported by EST evidence. Also see: Documentation of NCBI's Annotation Process ##Genome-Annotation-Data-START## Annotation Provider :: NCBI Annotation Status :: Full annotation Annotation Name :: Mus musculus Annotation Release 108 Annotation Version :: 108 Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline Annotation Software Version :: 8.2 Annotation Method :: Best-placed RefSeq; Gnomon Features Annotated :: Gene; mRNA; CDS; ncRNA ##Genome-Annotation-Data-END## |
1 | ATGGATTCTC CATCTAGTGT TTCTTCTTAT TCCTCCTCCT CCCTCTCCCC ATCATTTTCC |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
RefSeq | XP_030108441.1 |
CDS | 168..794 |
Translation |
Target ORF information:
Target ORF information:
|
XM_030252581.1 |
1 | ATGGATTCTC CATCTAGTGT TTCTTCTTAT TCCTCCTCCT CCCTCTCCCC ATCATTTTCC |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
Machine learning helps identify CHRONO as a circadian clock component. |
A novel protein, CHRONO, functions as a core component of the mammalian circadian clock. |
Gene model 129 (Gm129) encodes a novel transcriptional repressor that modulates circadian gene expression. |
A catalogue of genes in mouse embryonal carcinoma F9 cells identified with expressed sequence tags. |