Gene Symbol | Prdm13 |
Entrez Gene ID | 230025 |
Full Name | PR domain containing 13 |
General protein information |
|
Gene Type | protein-coding |
Organism | Mus musculus(house mouse) |
Genome |
ORF » Species Summary » Mus musculus » Prdm13 cDNA ORF clone
gRNAs
Gene Symbol | Prdm13 |
Entrez Gene ID | 230025 |
Full Name | PR domain containing 13 |
General protein information |
|
Gene Type | protein-coding |
Organism | Mus musculus(house mouse) |
Genome |
mRNA | Protein | Name |
---|---|---|
XM_006537807.2 | XP_006537870.1 | PR domain zinc finger protein 13 isoform X1 |
XM_006537806.2 | XP_006537869.1 | PR domain zinc finger protein 13 isoform X1 |
NM_001080771.1 | NP_001074240.1 | PR domain zinc finger protein 13 |
Mus musculus (house mouse) | Prdm13 | NP_001074240.1 |
Danio rerio (zebrafish) | prdm13 | XP_001336591.2 |
Rattus norvegicus (Norway rat) | Prdm13 | XP_006238009.1 |
Xenopus tropicalis (tropical clawed frog) | prdm13 | XP_002932206.1 |
Homo sapiens (human) | PRDM13 | NP_067633.2 |
Pan troglodytes (chimpanzee) | PRDM13 | XP_003311465.1 |
LOC100428049 | XP_002803888.1 | |
Bos taurus (cattle) | PRDM13 | NP_001179939.1 |
Prdm13 is required for Ebf3+ amacrine cell formation in the retina.
Goodson NB, Nahreini J, Randazzo G, Uruena A, Johnson JE, Brzezinski JA 4th
Developmental biology(2017 Dec)
Repression by PRDM13 is critical for generating precision in neuronal identity.
Mona B, Uruena A, Kollipara RK, Ma Z, Borromeo MD, Chang JC, Johnson JE
eLife6(2017 Aug)
Prdm13 regulates subtype specification of retinal amacrine interneurons and modulates visual sensitivity.
Watanabe S, Sanuki R, Sugita Y, Imai W, Yamazaki R, Kozuka T, Ohsuga M, Furukawa T
The Journal of neuroscience : the official journal of the Society for Neuroscience35(20)8004-20(2015 May)
Deficiency of Prdm13, a dorsomedial hypothalamus-enriched gene, mimics age-associated changes in sleep quality and adiposity.
Satoh A, Brace CS, Rensing N, Imai S
Aging cell14(2)209-18(2015 Apr)
The Prdm13 histone methyltransferase encoding gene is a Ptf1a-Rbpj downstream target that suppresses glutamatergic and promotes GABAergic neuronal fate in the dorsal neural tube.
Hanotel J, Bessodes N, Th?lie A, Hedderich M, Parain K, Van Driessche B, Brand?o Kde O, Kricha S, Jorgensen MC, Grapin-Botton A, Serup P, Van Lint C, Perron M, Pieler T, Henningfeld KA, Bellefroid EJ
Developmental biology386(2)340-57(2014 Feb)
GeneRIFs: Gene References Into Functions What's a GeneRIF?
Targeted deletion of Prdm13 leads to a specific reduction of amacrine cells and changes visual sensitivity.
Title: Prdm13 regulates subtype specification of retinal amacrine interneurons and modulates visual sensitivity.
Findings indicate that Prdm13/Nkx2-1-mediated signaling in the DMC declines with advanced age, leading to decreased sleep quality and increased adiposity.
Title: Deficiency of Prdm13, a dorsomedial hypothalamus-enriched gene, mimics age-associated changes in sleep quality and adiposity.
The following Prdm13 gene cDNA ORF clone sequences were retrieved from the NCBI Reference Sequence Database (RefSeq). These sequences represent the protein coding region of the Prdm13 cDNA ORF which is encoded by the open reading frame (ORF) sequence. ORF sequences can be delivered in our standard vector, pcDNA3.1+/C-(K)DYK or the vector of your choice as an expression/transfection-ready ORF clone. Not the clone you want? Click here to find your clone.
CloneID | OMu01440 | |
Clone ID Related Accession (Same CDS sequence) | NM_001080771.1 | |
Accession Version | NM_001080771.1 Latest version! | Documents for ORF clone product in default vector |
Sequence Information | ORF Nucleotide Sequence (Length: 2265bp) Protein sequence SNP |
|
Vector | pcDNA3.1-C-(k)DYK or customized vector | ![]() |
Clone information | Clone Map | ![]() |
Tag on pcDNA3.1+/C-(K)DYK | C terminal DYKDDDDK tags | |
ORF Insert Method | CloneEZ™ Seamless cloning technology | |
Insert Structure | linear | |
Update Date | 2019-12-25 | |
Organism | Mus musculus(house mouse) | |
Product | PR domain zinc finger protein 13 | |
Comment | Comment: VALIDATED REFSEQ: This record has undergone validation or preliminary review. The reference sequence was derived from BC017632.1 and BB665287.1. On or before Jan 26, 2007 this sequence version replaced XM_907402.2, XM_920394.2, XM_884367.2, XM_131309.6, XM_977119.1, XM_977082.1. ##Evidence-Data-START## Transcript exon combination :: BB665287.1, BY731300.1 [ECO:0000332] RNAseq introns :: single sample supports all introns SAMN01164138, SAMN01164139 [ECO:0000348] ##Evidence-Data-END## COMPLETENESS: complete on the 3' end. |
1 | ATGCCCGCCC ACGTCACTCC GCGGACAGAA GACGCACGTC GGGGTGCGGG TCCCTCCTCT |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
RefSeq | NP_001074240.1 |
CDS | 166..2430 |
Translation |
Target ORF information:
Target ORF information:
|
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1 | ATGCCCGCCC ACGTCACTCC GCGGACAGAA GACGCACGTC GGGGTGCGGG TCCCTCCTCT |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
CloneID | OMu32865 | |
Clone ID Related Accession (Same CDS sequence) | XM_006537807.2 , XM_006537806.2 | |
Accession Version | XM_006537807.2 Latest version! | Documents for ORF clone product in default vector |
Sequence Information | ORF Nucleotide Sequence (Length: 1971bp) Protein sequence SNP |
|
Vector | pcDNA3.1-C-(k)DYK or customized vector | ![]() |
Clone information | Clone Map | ![]() |
Tag on pcDNA3.1+/C-(K)DYK | C terminal DYKDDDDK tags | |
ORF Insert Method | CloneEZ™ Seamless cloning technology | |
Insert Structure | linear | |
Update Date | 2019-08-07 | |
Organism | Mus musculus(house mouse) | |
Product | PR domain zinc finger protein 13 isoform X1 | |
Comment | Comment: MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NC_000070.6) annotated using gene prediction method: Gnomon, supported by EST evidence. Also see: Documentation of NCBI's Annotation Process On Feb 9, 2015 this sequence version replaced XM_006537807.1. ##Genome-Annotation-Data-START## Annotation Provider :: NCBI Annotation Status :: Full annotation Annotation Name :: Mus musculus Annotation Release 108 Annotation Version :: 108 Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline Annotation Software Version :: 8.2 Annotation Method :: Best-placed RefSeq; Gnomon Features Annotated :: Gene; mRNA; CDS; ncRNA ##Genome-Annotation-Data-END## |
1 | ATGGTGAGAG GGGAGCTGGT GGACGAGTCA GGGGGCTCCC CTCTGGAGTG GATAGGGTTA |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
RefSeq | XP_006537870.1 |
CDS | 1189..3159 |
Translation |
Target ORF information:
Target ORF information:
|
![]() |
1 | ATGGTGAGAG GGGAGCTGGT GGACGAGTCA GGGGGCTCCC CTCTGGAGTG GATAGGGTTA |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
CloneID | OMu32865 | |
Clone ID Related Accession (Same CDS sequence) | XM_006537807.2 , XM_006537806.2 | |
Accession Version | XM_006537806.2 Latest version! | Documents for ORF clone product in default vector |
Sequence Information | ORF Nucleotide Sequence (Length: 1971bp) Protein sequence SNP |
|
Vector | pcDNA3.1-C-(k)DYK or customized vector | ![]() |
Clone information | Clone Map | ![]() |
Tag on pcDNA3.1+/C-(K)DYK | C terminal DYKDDDDK tags | |
ORF Insert Method | CloneEZ™ Seamless cloning technology | |
Insert Structure | linear | |
Update Date | 2019-08-07 | |
Organism | Mus musculus(house mouse) | |
Product | PR domain zinc finger protein 13 isoform X1 | |
Comment | Comment: MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NC_000070.6) annotated using gene prediction method: Gnomon, supported by EST evidence. Also see: Documentation of NCBI's Annotation Process On Feb 9, 2015 this sequence version replaced XM_006537806.1. ##Genome-Annotation-Data-START## Annotation Provider :: NCBI Annotation Status :: Full annotation Annotation Name :: Mus musculus Annotation Release 108 Annotation Version :: 108 Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline Annotation Software Version :: 8.2 Annotation Method :: Best-placed RefSeq; Gnomon Features Annotated :: Gene; mRNA; CDS; ncRNA ##Genome-Annotation-Data-END## |
1 | ATGGTGAGAG GGGAGCTGGT GGACGAGTCA GGGGGCTCCC CTCTGGAGTG GATAGGGTTA |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
RefSeq | XP_006537869.1 |
CDS | 1256..3226 |
Translation |
Target ORF information:
Target ORF information:
|
![]() |
1 | ATGGTGAGAG GGGAGCTGGT GGACGAGTCA GGGGGCTCCC CTCTGGAGTG GATAGGGTTA |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
Prdm13 is required for Ebf3+ amacrine cell formation in the retina. |
Repression by PRDM13 is critical for generating precision in neuronal identity. |
Prdm13 regulates subtype specification of retinal amacrine interneurons and modulates visual sensitivity. |
Deficiency of Prdm13, a dorsomedial hypothalamus-enriched gene, mimics age-associated changes in sleep quality and adiposity. |
The Prdm13 histone methyltransferase encoding gene is a Ptf1a-Rbpj downstream target that suppresses glutamatergic and promotes GABAergic neuronal fate in the dorsal neural tube. |