Gene Symbol | Tapt1 |
Entrez Gene ID | 231225 |
Full Name | transmembrane anterior posterior transformation 1 |
Synonyms | 4932414K18Rik |
General protein information |
|
Gene Type | protein-coding |
Organism | Mus musculus(house mouse) |
Genome |
ORF » Species Summary » Mus musculus » Tapt1 cDNA ORF clone
gRNAs
Gene Symbol | Tapt1 |
Entrez Gene ID | 231225 |
Full Name | transmembrane anterior posterior transformation 1 |
Synonyms | 4932414K18Rik |
General protein information |
|
Gene Type | protein-coding |
Organism | Mus musculus(house mouse) |
Genome |
mRNA | Protein | Name |
---|---|---|
XM_006503940.3 | XP_006504003.1 | transmembrane anterior posterior transformation protein 1 isoform X2 |
XM_006503939.4 | XP_006504002.1 | transmembrane anterior posterior transformation protein 1 isoform X1 |
XM_030254388.1 | XP_030110248.1 | transmembrane anterior posterior transformation protein 1 isoform X3 |
XM_006503941.2 | XP_006504004.1 | transmembrane anterior posterior transformation protein 1 isoform X3 |
XM_006503940.2 | XP_006504003.1 | transmembrane anterior posterior transformation protein 1 isoform X2 |
XM_006503939.3 | XP_006504002.1 | transmembrane anterior posterior transformation protein 1 isoform X1 |
NM_173764.3 | NP_776125.2 | transmembrane anterior posterior transformation protein 1 |
TAPT1 | XP_001100596.1 | |
Bos taurus (cattle) | TAPT1 | XP_002688514.3 |
Mus musculus (house mouse) | Tapt1 | NP_776125.2 |
Gallus gallus (chicken) | TAPT1 | NP_001026332.2 |
Danio rerio (zebrafish) | tapt1 | NP_001116722.1 |
Canis lupus familiaris (dog) | TAPT1 | XP_005618610.1 |
Rattus norvegicus (Norway rat) | Tapt1 | XP_223500.7 |
Anopheles gambiae (African malaria mosquito) | AgaP_AGAP002775 | XP_312149.4 |
Drosophila melanogaster (fruit fly) | CG7218 | NP_650678.1 |
Caenorhabditis elegans (roundworm) | F26F2.7 | NP_507972.1 |
Homo sapiens (human) | TAPT1 | NP_699196.2 |
Pan troglodytes (chimpanzee) | TAPT1 | XP_001161103.1 |
Xenopus tropicalis (tropical clawed frog) | tapt1 | XP_002938684.2 |
High resolution mapping and positional cloning of ENU-induced mutations in the Rw region of mouse chromosome 5.
Ching YH, Munroe RJ, Moran JL, Barker AK, Mauceli E, Fennell T, Dipalma F, Lindblad-Toh K, Abcunas LM, Gilmour JF, Harris TP, Kloet SL, Luo Y, McElwee JL, Mu W, Park HK, Rogal DL, Schimenti KJ, Shen L, Shindo M, Shou JY, Stenson EK, Stover PJ, Schimenti JC
BMC genetics11106(2010 Nov)
Mutation of a ubiquitously expressed mouse transmembrane protein (Tapt1) causes specific skeletal homeotic transformations.
Howell GR, Shindo M, Murray S, Gridley T, Wilson LA, Schimenti JC
Genetics175(2)699-707(2007 Feb)
Random mutagenesis of proximal mouse chromosome 5 uncovers predominantly embryonic lethal mutations.
Wilson L, Ching YH, Farias M, Hartford SA, Howell G, Shao H, Bucan M, Schimenti JC
Genome research15(8)1095-105(2005 Aug)
Genomic analysis of mouse retinal development.
Blackshaw S, Harpavat S, Trimarchi J, Cai L, Huang H, Kuo WP, Weber G, Lee K, Fraioli RE, Cho SH, Yung R, Asch E, Ohno-Machado L, Wong WH, Cepko CL
PLoS biology2(9)E247(2004 Sep)
BayGenomics: a resource of insertional mutations in mouse embryonic stem cells.
Stryke D, Kawamoto M, Huang CC, Johns SJ, King LA, Harper CA, Meng EC, Lee RE, Yee A, L'Italien L, Chuang PT, Young SG, Skarnes WC, Babbitt PC, Ferrin TE
Nucleic acids research31(1)278-81(2003 Jan)
GeneRIFs: Gene References Into Functions What's a GeneRIF?
TAPT1 is a downstream effector of HOXC8 that may act by transducing or transmitting extracellular information required for axial skeletal patterning during development.
Title: Mutation of a ubiquitously expressed mouse transmembrane protein (Tapt1) causes specific skeletal homeotic transformations.
The following Tapt1 gene cDNA ORF clone sequences were retrieved from the NCBI Reference Sequence Database (RefSeq). These sequences represent the protein coding region of the Tapt1 cDNA ORF which is encoded by the open reading frame (ORF) sequence. ORF sequences can be delivered in our standard vector, pcDNA3.1+/C-(K)DYK or the vector of your choice as an expression/transfection-ready ORF clone. Not the clone you want? Click here to find your clone.
CloneID | OMu35082 | |
Clone ID Related Accession (Same CDS sequence) | XM_030254388.1 , XM_006503941.2 | |
Accession Version | XM_006503941.2 Latest version! | Documents for ORF clone product in default vector |
Sequence Information | ORF Nucleotide Sequence (Length: 1182bp) Protein sequence SNP |
|
Vector | pcDNA3.1-C-(k)DYK or customized vector | ![]() |
Clone information | Clone Map | ![]() |
Tag on pcDNA3.1+/C-(K)DYK | C terminal DYKDDDDK tags | |
ORF Insert Method | CloneEZ™ Seamless cloning technology | |
Insert Structure | linear | |
Update Date | 2016-06-21 | |
Organism | Mus musculus(house mouse) | |
Product | transmembrane anterior posterior transformation protein 1 isoform X3 | |
Comment | Comment: MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NC_000071.6) annotated using gene prediction method: Gnomon, supported by mRNA and EST evidence. Also see: Documentation of NCBI's Annotation Process On Jun 22, 2016 this sequence version replaced XM_006503941.1. ##Genome-Annotation-Data-START## Annotation Provider :: NCBI Annotation Status :: Full annotation Annotation Version :: Mus musculus Annotation Release 106 Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline Annotation Software Version :: 7.1 Annotation Method :: Best-placed RefSeq; Gnomon Features Annotated :: Gene; mRNA; CDS; ncRNA ##Genome-Annotation-Data-END## |
1 | ATGATGCACT ATGTTGACTA CTCCATGATG TACCACCTGA TAAGAGGCCA GTCTGTCATC |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
RefSeq | XP_006504004.1 |
CDS | 376..1557 |
Translation |
Target ORF information:
Target ORF information:
|
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1 | ATGATGCACT ATGTTGACTA CTCCATGATG TACCACCTGA TAAGAGGCCA GTCTGTCATC |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
CloneID | OMu35082 | |
Clone ID Related Accession (Same CDS sequence) | XM_030254388.1 , XM_006503941.2 | |
Accession Version | XM_030254388.1 Latest version! | Documents for ORF clone product in default vector |
Sequence Information | ORF Nucleotide Sequence (Length: 1182bp) Protein sequence SNP |
|
Vector | pcDNA3.1-C-(k)DYK or customized vector | ![]() |
Clone information | Clone Map | ![]() |
Tag on pcDNA3.1+/C-(K)DYK | C terminal DYKDDDDK tags | |
ORF Insert Method | CloneEZ™ Seamless cloning technology | |
Insert Structure | linear | |
Update Date | 2019-08-07 | |
Organism | Mus musculus(house mouse) | |
Product | transmembrane anterior posterior transformation protein 1 isoform X3 | |
Comment | Comment: MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NC_000071.6) annotated using gene prediction method: Gnomon, supported by mRNA and EST evidence. Also see: Documentation of NCBI's Annotation Process ##Genome-Annotation-Data-START## Annotation Provider :: NCBI Annotation Status :: Full annotation Annotation Name :: Mus musculus Annotation Release 108 Annotation Version :: 108 Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline Annotation Software Version :: 8.2 Annotation Method :: Best-placed RefSeq; Gnomon Features Annotated :: Gene; mRNA; CDS; ncRNA ##Genome-Annotation-Data-END## |
1 | ATGATGCACT ATGTTGACTA CTCCATGATG TACCACCTGA TAAGAGGCCA GTCTGTCATC |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
RefSeq | XP_030110248.1 |
CDS | 621..1802 |
Translation |
Target ORF information:
Target ORF information:
|
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1 | ATGATGCACT ATGTTGACTA CTCCATGATG TACCACCTGA TAAGAGGCCA GTCTGTCATC |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
CloneID | OMu35080 | |
Clone ID Related Accession (Same CDS sequence) | XM_006503939.4 , XM_006503939.3 | |
Accession Version | XM_006503939.4 Latest version! | Documents for ORF clone product in default vector |
Sequence Information | ORF Nucleotide Sequence (Length: 1911bp) Protein sequence SNP |
|
Vector | pcDNA3.1-C-(k)DYK or customized vector | ![]() |
Clone information | Clone Map | ![]() |
Tag on pcDNA3.1+/C-(K)DYK | C terminal DYKDDDDK tags | |
ORF Insert Method | CloneEZ™ Seamless cloning technology | |
Insert Structure | linear | |
Update Date | 2019-08-07 | |
Organism | Mus musculus(house mouse) | |
Product | transmembrane anterior posterior transformation protein 1 isoform X1 | |
Comment | Comment: MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NC_000071.6) annotated using gene prediction method: Gnomon, supported by mRNA and EST evidence. Also see: Documentation of NCBI's Annotation Process On Aug 8, 2019 this sequence version replaced XM_006503939.3. ##Genome-Annotation-Data-START## Annotation Provider :: NCBI Annotation Status :: Full annotation Annotation Name :: Mus musculus Annotation Release 108 Annotation Version :: 108 Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline Annotation Software Version :: 8.2 Annotation Method :: Best-placed RefSeq; Gnomon Features Annotated :: Gene; mRNA; CDS; ncRNA ##Genome-Annotation-Data-END## |
1 | ATGCAGCCAA GACAGCAGAG CCACCGGGTC GGCGCCGGCG GGAGCCACAG AGCTGGAGCC |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
RefSeq | XP_006504002.1 |
CDS | 4095..6005 |
Translation |
Target ORF information:
Target ORF information:
|
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1 | ATGCAGCCAA GACAGCAGAG CCACCGGGTC GGCGCCGGCG GGAGCCACAG AGCTGGAGCC |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
CloneID | OMu35081 | |
Clone ID Related Accession (Same CDS sequence) | XM_006503940.3 , XM_006503940.2 | |
Accession Version | XM_006503940.3 Latest version! | Documents for ORF clone product in default vector |
Sequence Information | ORF Nucleotide Sequence (Length: 1677bp) Protein sequence SNP |
|
Vector | pcDNA3.1-C-(k)DYK or customized vector | ![]() |
Clone information | Clone Map | ![]() |
Tag on pcDNA3.1+/C-(K)DYK | C terminal DYKDDDDK tags | |
ORF Insert Method | CloneEZ™ Seamless cloning technology | |
Insert Structure | linear | |
Update Date | 2019-08-07 | |
Organism | Mus musculus(house mouse) | |
Product | transmembrane anterior posterior transformation protein 1 isoform X2 | |
Comment | Comment: MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NC_000071.6) annotated using gene prediction method: Gnomon, supported by mRNA and EST evidence. Also see: Documentation of NCBI's Annotation Process On Aug 8, 2019 this sequence version replaced XM_006503940.2. ##Genome-Annotation-Data-START## Annotation Provider :: NCBI Annotation Status :: Full annotation Annotation Name :: Mus musculus Annotation Release 108 Annotation Version :: 108 Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline Annotation Software Version :: 8.2 Annotation Method :: Best-placed RefSeq; Gnomon Features Annotated :: Gene; mRNA; CDS; ncRNA ##Genome-Annotation-Data-END## |
1 | ATGGCGGCTG CCCGGGCGAG GGGCGGGGCG AGGCGGCGAG GGGGCCGGCG GGAGGCGGAG |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
RefSeq | XP_006504003.1 |
CDS | 354..2030 |
Translation |
Target ORF information:
Target ORF information:
|
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1 | ATGGCGGCTG CCCGGGCGAG GGGCGGGGCG AGGCGGCGAG GGGGCCGGCG GGAGGCGGAG |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
CloneID | OMu03932 | |
Clone ID Related Accession (Same CDS sequence) | NM_173764.3 | |
Accession Version | NM_173764.3 Latest version! | Documents for ORF clone product in default vector |
Sequence Information | ORF Nucleotide Sequence (Length: 1695bp) Protein sequence SNP |
|
Vector | pcDNA3.1-C-(k)DYK or customized vector | ![]() |
Clone information | Clone Map | ![]() |
Tag on pcDNA3.1+/C-(K)DYK | C terminal DYKDDDDK tags | |
ORF Insert Method | CloneEZ™ Seamless cloning technology | |
Insert Structure | linear | |
Update Date | 2019-09-09 | |
Organism | Mus musculus(house mouse) | |
Product | transmembrane anterior posterior transformation protein 1 | |
Comment | Comment: VALIDATED REFSEQ: This record has undergone validation or preliminary review. The reference sequence was derived from CN459607.1 and BC096038.1. On Jul 26, 2005 this sequence version replaced NM_173764.2. ##Evidence-Data-START## RNAseq introns :: single sample supports all introns SAMN01164135 [ECO:0000348] ##Evidence-Data-END## |
1 | ATGGCGGGCG TCTGCGACGC GGCCGCCCCG GGAGAAGGCG GCGGTGGCGG CGCGGACGGC |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
RefSeq | NP_776125.2 |
CDS | 4..1698 |
Translation |
Target ORF information:
Target ORF information:
|
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1 | ATGGCGGGCG TCTGCGACGC GGCCGCCCCG GGAGAAGGCG GCGGTGGCGG CGCGGACGGC |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
CloneID | OMu35080 | |
Clone ID Related Accession (Same CDS sequence) | XM_006503939.4 , XM_006503939.3 | |
Accession Version | XM_006503939.3 | Documents for ORF clone product in default vector |
Sequence Information | ORF Nucleotide Sequence (Length: 1911bp) Protein sequence SNP |
|
Vector | pcDNA3.1-C-(k)DYK or customized vector | ![]() |
Clone information | Clone Map | ![]() |
Tag on pcDNA3.1+/C-(K)DYK | C terminal DYKDDDDK tags | |
ORF Insert Method | CloneEZ™ Seamless cloning technology | |
Insert Structure | linear | |
Update Date | 2016-06-21 | |
Organism | Mus musculus(house mouse) | |
Product | transmembrane anterior posterior transformation protein 1 isoform X1 | |
Comment | Comment: MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NC_000071.6) annotated using gene prediction method: Gnomon, supported by mRNA and EST evidence. Also see: Documentation of NCBI's Annotation Process On Jun 22, 2016 this sequence version replaced XM_006503939.2. ##Genome-Annotation-Data-START## Annotation Provider :: NCBI Annotation Status :: Full annotation Annotation Version :: Mus musculus Annotation Release 106 Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline Annotation Software Version :: 7.1 Annotation Method :: Best-placed RefSeq; Gnomon Features Annotated :: Gene; mRNA; CDS; ncRNA ##Genome-Annotation-Data-END## |
1 | ATGCAGCCAA GACAGCAGAG CCACCGGGTC GGCGCCGGCG GGAGCCACAG AGCTGGAGCC |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
RefSeq | XP_006504002.1 |
CDS | 1698..3608 |
Translation |
Target ORF information:
Target ORF information:
|
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1 | ATGCAGCCAA GACAGCAGAG CCACCGGGTC GGCGCCGGCG GGAGCCACAG AGCTGGAGCC |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
CloneID | OMu35081 | |
Clone ID Related Accession (Same CDS sequence) | XM_006503940.3 , XM_006503940.2 | |
Accession Version | XM_006503940.2 | Documents for ORF clone product in default vector |
Sequence Information | ORF Nucleotide Sequence (Length: 1677bp) Protein sequence SNP |
|
Vector | pcDNA3.1-C-(k)DYK or customized vector | ![]() |
Clone information | Clone Map | ![]() |
Tag on pcDNA3.1+/C-(K)DYK | C terminal DYKDDDDK tags | |
ORF Insert Method | CloneEZ™ Seamless cloning technology | |
Insert Structure | linear | |
Update Date | 2016-06-21 | |
Organism | Mus musculus(house mouse) | |
Product | transmembrane anterior posterior transformation protein 1 isoform X2 | |
Comment | Comment: MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NC_000071.6) annotated using gene prediction method: Gnomon, supported by mRNA and EST evidence. Also see: Documentation of NCBI's Annotation Process On Jun 22, 2016 this sequence version replaced XM_006503940.1. ##Genome-Annotation-Data-START## Annotation Provider :: NCBI Annotation Status :: Full annotation Annotation Version :: Mus musculus Annotation Release 106 Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline Annotation Software Version :: 7.1 Annotation Method :: Best-placed RefSeq; Gnomon Features Annotated :: Gene; mRNA; CDS; ncRNA ##Genome-Annotation-Data-END## |
1 | ATGGCGGCTG CCCGGGCGAG GGGCGGGGCG AGGCGGCGAG GGGGCCGGCG GGAGGCGGAG |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
RefSeq | XP_006504003.1 |
CDS | 354..2030 |
Translation |
Target ORF information:
Target ORF information:
|
![]() |
1 | ATGGCGGCTG CCCGGGCGAG GGGCGGGGCG AGGCGGCGAG GGGGCCGGCG GGAGGCGGAG |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
High resolution mapping and positional cloning of ENU-induced mutations in the Rw region of mouse chromosome 5. |
Mutation of a ubiquitously expressed mouse transmembrane protein (Tapt1) causes specific skeletal homeotic transformations. |
Random mutagenesis of proximal mouse chromosome 5 uncovers predominantly embryonic lethal mutations. |
Genomic analysis of mouse retinal development. |
BayGenomics: a resource of insertional mutations in mouse embryonic stem cells. |