Gene Symbol | Ccz1 |
Entrez Gene ID | 231874 |
Full Name | CCZ1 vacuolar protein trafficking and biogenesis associated |
Synonyms | AU022870 |
General protein information |
|
Gene Type | protein-coding |
Organism | Mus musculus(house mouse) |
Genome |
ORF » Species Summary » Mus musculus » Ccz1 cDNA ORF clone
Gene Symbol | Ccz1 |
Entrez Gene ID | 231874 |
Full Name | CCZ1 vacuolar protein trafficking and biogenesis associated |
Synonyms | AU022870 |
General protein information |
|
Gene Type | protein-coding |
Organism | Mus musculus(house mouse) |
Genome |
mRNA | Protein | Name |
---|---|---|
NM_177682.3 | NP_808350.1 | vacuolar fusion protein CCZ1 homolog |
XM_017320876.2 | XP_017176365.1 | vacuolar fusion protein CCZ1 homolog isoform X1 |
XM_017320876.1 | XP_017176365.1 | vacuolar fusion protein CCZ1 homolog isoform X1 |
Pan troglodytes (chimpanzee) | CCZ1B | XP_519566.2 |
Caenorhabditis elegans (roundworm) | ccz-1 | NP_506387.1 |
LOC721820 | XP_001118015.1 | |
Canis lupus familiaris (dog) | CCZ1 | XP_536878.3 |
Bos taurus (cattle) | CCZ1 | NP_001068960.1 |
Danio rerio (zebrafish) | ccz1 | NP_956428.1 |
Arabidopsis thaliana (thale cress) | AT1G80910 | NP_178206.1 |
Pan troglodytes (chimpanzee) | LOC463258 | XP_518965.3 |
Mus musculus (house mouse) | Ccz1 | NP_808350.1 |
Gallus gallus (chicken) | CCZ1 | NP_001006158.1 |
Drosophila melanogaster (fruit fly) | CG14980 | NP_647835.1 |
Anopheles gambiae (African malaria mosquito) | AgaP_AGAP006687 | XP_557365.2 |
Oryza sativa (rice) | Os08g0427300 | NP_001061842.1 |
Xenopus tropicalis (tropical clawed frog) | ccz1b | NP_001008198.1 |
Homo sapiens (human) | CCZ1 | NP_056437.4 |
Homo sapiens (human) | CCZ1B | NP_932765.1 |
Rattus norvegicus (Norway rat) | Ccz1 | NP_001014148.1 |
Arabidopsis thaliana (thale cress) | AT1G16020 | NP_849674.1 |
Identification of two evolutionarily conserved genes regulating processing of engulfed apoptotic cells.
Kinchen JM, Ravichandran KS
Nature464(7289)778-82(2010 Apr)
Genomic analysis of mouse retinal development.
Blackshaw S, Harpavat S, Trimarchi J, Cai L, Huang H, Kuo WP, Weber G, Lee K, Fraioli RE, Cho SH, Yung R, Asch E, Ohno-Machado L, Wong WH, Cepko CL
PLoS biology2(9)E247(2004 Sep)
BayGenomics: a resource of insertional mutations in mouse embryonic stem cells.
Stryke D, Kawamoto M, Huang CC, Johns SJ, King LA, Harper CA, Meng EC, Lee RE, Yee A, L'Italien L, Chuang PT, Young SG, Skarnes WC, Babbitt PC, Ferrin TE
Nucleic acids research31(1)278-81(2003 Jan)
Construction of long-transcript enriched cDNA libraries from submicrogram amounts of total RNAs by a universal PCR amplification method.
Piao Y, Ko NT, Lim MK, Ko MS
Genome research11(9)1553-8(2001 Sep)
GeneRIFs: Gene References Into Functions What's a GeneRIF?
data identify SAND-1 (Mon1) and CCZ-1 (Ccz1) as critical and evolutionarily conserved components regulating the processing of ingested apoptotic cell corpses [ccz1]
Title: Identification of two evolutionarily conserved genes regulating processing of engulfed apoptotic cells.
The following Ccz1 gene cDNA ORF clone sequences were retrieved from the NCBI Reference Sequence Database (RefSeq). These sequences represent the protein coding region of the Ccz1 cDNA ORF which is encoded by the open reading frame (ORF) sequence. ORF sequences can be delivered in our standard vector, pcDNA3.1+/C-(K)DYK or the vector of your choice as an expression/transfection-ready ORF clone. Not the clone you want? Click here to find your clone.
CloneID | OMu81375 | |
Clone ID Related Accession (Same CDS sequence) | XM_017320876.2 , XM_017320876.1 | |
Accession Version | XM_017320876.1 | Documents for ORF clone product in default vector |
Sequence Information | ORF Nucleotide Sequence (Length: 1020bp) Protein sequence SNP |
|
Vector | pcDNA3.1-C-(k)DYK or customized vector | User Manual |
Clone information | Clone Map | MSDS |
Tag on pcDNA3.1+/C-(K)DYK | C terminal DYKDDDDK tags | |
ORF Insert Method | CloneEZ™ Seamless cloning technology | |
Insert Structure | linear | |
Update Date | 2016-06-21 | |
Organism | Mus musculus(house mouse) | |
Product | vacuolar fusion protein CCZ1 homolog isoform X1 | |
Comment | Comment: MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NC_000071.6) annotated using gene prediction method: Gnomon, supported by mRNA and EST evidence. Also see: Documentation of NCBI's Annotation Process ##Genome-Annotation-Data-START## Annotation Provider :: NCBI Annotation Status :: Full annotation Annotation Version :: Mus musculus Annotation Release 106 Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline Annotation Software Version :: 7.1 Annotation Method :: Best-placed RefSeq; Gnomon Features Annotated :: Gene; mRNA; CDS; ncRNA ##Genome-Annotation-Data-END## |
1 | ATGTACAAGC TTTTCAATGG GACGTTTCTG AAAGCCATGG AAGATGGAGG CGTCAAGCTC |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
RefSeq | XP_017176365.1 |
CDS | 322..1341 |
Translation |
Target ORF information:
Target ORF information:
|
XM_017320876.1 |
1 | ATGTACAAGC TTTTCAATGG GACGTTTCTG AAAGCCATGG AAGATGGAGG CGTCAAGCTC |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
CloneID | OMu06640 | |
Clone ID Related Accession (Same CDS sequence) | NM_177682.3 | |
Accession Version | NM_177682.3 Latest version! | Documents for ORF clone product in default vector |
Sequence Information | ORF Nucleotide Sequence (Length: 1443bp) Protein sequence SNP |
|
Vector | pcDNA3.1-C-(k)DYK or customized vector | User Manual |
Clone information | Clone Map | MSDS |
Tag on pcDNA3.1+/C-(K)DYK | C terminal DYKDDDDK tags | |
ORF Insert Method | CloneEZ™ Seamless cloning technology | |
Insert Structure | linear | |
Update Date | 2019-10-18 | |
Organism | Mus musculus(house mouse) | |
Product | vacuolar fusion protein CCZ1 homolog | |
Comment | Comment: PROVISIONAL REFSEQ: This record has not yet been subject to final NCBI review. The reference sequence was derived from BC048077.1. On Jun 20, 2003 this sequence version replaced NM_177682.2. ##Evidence-Data-START## Transcript exon combination :: BC048077.1, AK146704.1 [ECO:0000332] RNAseq introns :: single sample supports all introns SAMN01164131, SAMN01164134 [ECO:0000348] ##Evidence-Data-END## |
1 | ATGGCGGCAG CCGCGGCCGG GCCGGGTGCT TGGGCGGCCC AGGAGAAGCA GTTCCCGCCA |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
RefSeq | NP_808350.1 |
CDS | 42..1484 |
Translation |
Target ORF information:
Target ORF information:
|
NM_177682.3 |
1 | ATGGCGGCAG CCGCGGCCGG GCCGGGTGCT TGGGCGGCCC AGGAGAAGCA GTTCCCGCCA |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
CloneID | OMu81375 | |
Clone ID Related Accession (Same CDS sequence) | XM_017320876.2 , XM_017320876.1 | |
Accession Version | XM_017320876.2 Latest version! | Documents for ORF clone product in default vector |
Sequence Information | ORF Nucleotide Sequence (Length: 1020bp) Protein sequence SNP |
|
Vector | pcDNA3.1-C-(k)DYK or customized vector | User Manual |
Clone information | Clone Map | MSDS |
Tag on pcDNA3.1+/C-(K)DYK | C terminal DYKDDDDK tags | |
ORF Insert Method | CloneEZ™ Seamless cloning technology | |
Insert Structure | linear | |
Update Date | 2019-08-07 | |
Organism | Mus musculus(house mouse) | |
Product | vacuolar fusion protein CCZ1 homolog isoform X1 | |
Comment | Comment: MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NC_000071.6) annotated using gene prediction method: Gnomon, supported by mRNA and EST evidence. Also see: Documentation of NCBI's Annotation Process On Aug 8, 2019 this sequence version replaced XM_017320876.1. ##Genome-Annotation-Data-START## Annotation Provider :: NCBI Annotation Status :: Full annotation Annotation Name :: Mus musculus Annotation Release 108 Annotation Version :: 108 Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline Annotation Software Version :: 8.2 Annotation Method :: Best-placed RefSeq; Gnomon Features Annotated :: Gene; mRNA; CDS; ncRNA ##Genome-Annotation-Data-END## |
1 | ATGTACAAGC TTTTCAATGG GACGTTTCTG AAAGCCATGG AAGATGGAGG CGTCAAGCTC |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
RefSeq | XP_017176365.1 |
CDS | 605..1624 |
Translation |
Target ORF information:
Target ORF information:
|
XM_017320876.2 |
1 | ATGTACAAGC TTTTCAATGG GACGTTTCTG AAAGCCATGG AAGATGGAGG CGTCAAGCTC |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
Identification of two evolutionarily conserved genes regulating processing of engulfed apoptotic cells. |
Genomic analysis of mouse retinal development. |
BayGenomics: a resource of insertional mutations in mouse embryonic stem cells. |
Construction of long-transcript enriched cDNA libraries from submicrogram amounts of total RNAs by a universal PCR amplification method. |