Gene Symbol | SCAF1 |
Entrez Gene ID | 233208 |
Full Name | SR-related CTD-associated factor 1 |
Synonyms | AI480556,SR-A1 |
General protein information |
|
Gene Type | protein-coding |
Organism | Mus musculus(House mouse) |
Genome |
ORF » Species Summary » Mus musculus » SCAF1 cDNA ORF clone
gRNAs
Gene Symbol | SCAF1 |
Entrez Gene ID | 233208 |
Full Name | SR-related CTD-associated factor 1 |
Synonyms | AI480556,SR-A1 |
General protein information |
|
Gene Type | protein-coding |
Organism | Mus musculus(House mouse) |
Genome |
mRNA | Protein | Name |
---|---|---|
XM_011250855.1 | XP_011249157.1 | splicing factor, arginine/serine-rich 19 isoform X1 |
NM_001008422.1 | NP_001008422.1 | splicing factor, arginine/serine-rich 19 |
XM_011250855.3 | XP_011249157.1 | splicing factor, arginine/serine-rich 19 isoform X1 |
XM_006540821.2 | XP_006540884.1 | splicing factor, arginine/serine-rich 19 isoform X1 |
XM_006540821.3 | XP_006540884.1 | splicing factor, arginine/serine-rich 19 isoform X1 |
XM_006540821.4 | XP_006540884.1 | splicing factor, arginine/serine-rich 19 isoform X1 |
XM_011250855.2 | XP_011249157.1 | splicing factor, arginine/serine-rich 19 isoform X1 |
XM_030242466.1 | XP_030098326.1 | splicing factor, arginine/serine-rich 19 isoform X1 |
XM_006540820.2 | XP_006540883.1 | splicing factor, arginine/serine-rich 19 isoform X1 |
Malondialdehyde-acetaldehyde (MAA) adducted surfactant protein induced lung inflammation is mediated through scavenger receptor a (SR-A1).
Sapkota M, DeVasure JM, Kharbanda KK, Wyatt TA
Respiratory research18(1)36(2017 Feb)
GeneRIFs: Gene References Into Functions What's a GeneRIF?
Overall, the data demonstrate that SR-A1/CD204 plays an important role in SPD-MAA induced inflammation in lung.
Title: Malondialdehyde-acetaldehyde (MAA) adducted surfactant protein induced lung inflammation is mediated through scavenger receptor a (SR-A1).
The following SCAF1 gene cDNA ORF clone sequences were retrieved from the NCBI Reference Sequence Database (RefSeq). These sequences represent the protein coding region of the SCAF1 cDNA ORF which is encoded by the open reading frame (ORF) sequence. ORF sequences can be delivered in our standard vector, pcDNA3.1+/C-(K)DYK or the vector of your choice as an expression/transfection-ready ORF clone. Not the clone you want? Click here to find your clone.
CloneID | OMu10773 | |
Clone ID Related Accession (Same CDS sequence) | XM_011250855.1 , NM_001008422.1 , XM_011250855.3 , XM_006540821.2 , XM_006540821.3 , XM_006540821.4 , XM_011250855.2 , XM_030242466.1 , XM_006540820.2 | |
Accession Version | NM_001008422.1 Latest version! | Documents for ORF clone product in default vector |
Sequence Information | ORF Nucleotide Sequence (Length: 3771bp) Protein sequence SNP |
|
Vector | pcDNA3.1-C-(k)DYK or customized vector | ![]() |
Clone information | Clone Map | ![]() |
Tag on pcDNA3.1+/C-(K)DYK | C terminal DYKDDDDK tags | |
ORF Insert Method | CloneEZ™ Seamless cloning technology | |
Insert Structure | linear | |
Update Date | 2019-02-16 | |
Organism | Mus musculus(house mouse) | |
Product | splicing factor, arginine/serine-rich 19 | |
Comment | Comment: PROVISIONAL REFSEQ: This record has not yet been subject to final NCBI review. The reference sequence was derived from BC085153.1. On Dec 16, 2004 this sequence version replaced XM_133474.5. ##Evidence-Data-START## Transcript exon combination :: BC085153.1, BC079873.1 [ECO:0000332] RNAseq introns :: single sample supports all introns SAMN01164131, SAMN01164141 [ECO:0000348] ##Evidence-Data-END## |
1 | ATGGAGGAGG AAGATGAGTC TCGAGGTAAA ACAGAGGAGT CGGGAGAGGA TCGGGGAGAC |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
RefSeq | NP_001008422.1 |
CDS | 177..3947 |
Translation |
Target ORF information:
Target ORF information:
|
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1 | ATGGAGGAGG AAGATGAGTC TCGAGGTAAA ACAGAGGAGT CGGGAGAGGA TCGGGGAGAC |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
CloneID | OMu10773 | |
Clone ID Related Accession (Same CDS sequence) | XM_011250855.1 , NM_001008422.1 , XM_011250855.3 , XM_006540821.2 , XM_006540821.3 , XM_006540821.4 , XM_011250855.2 , XM_030242466.1 , XM_006540820.2 | |
Accession Version | XM_011250855.1 | Documents for ORF clone product in default vector |
Sequence Information | ORF Nucleotide Sequence (Length: 3771bp) Protein sequence SNP |
|
Vector | pcDNA3.1-C-(k)DYK or customized vector | ![]() |
Clone information | Clone Map | ![]() |
Tag on pcDNA3.1+/C-(K)DYK | C terminal DYKDDDDK tags | |
ORF Insert Method | CloneEZ™ Seamless cloning technology | |
Insert Structure | linear | |
Update Date | 2015-02-08 | |
Organism | Mus musculus(House mouse) | |
Product | splicing factor, arginine/serine-rich 19 isoform X1 | |
Comment |
1 | ATGGAGGAGG AAGATGAGTC TCGAGGTAAA ACAGAGGAGT CGGGAGAGGA TCGGGGAGAC |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
RefSeq | XP_011249157.1 |
Translation |
Target ORF information:
Target ORF information:
|
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1 | ATGGAGGAGG AAGATGAGTC TCGAGGTAAA ACAGAGGAGT CGGGAGAGGA TCGGGGAGAC |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
CloneID | OMu10773 | |
Clone ID Related Accession (Same CDS sequence) | XM_011250855.1 , NM_001008422.1 , XM_011250855.3 , XM_006540821.2 , XM_006540821.3 , XM_006540821.4 , XM_011250855.2 , XM_030242466.1 , XM_006540820.2 | |
Accession Version | XM_011250855.3 Latest version! | Documents for ORF clone product in default vector |
Sequence Information | ORF Nucleotide Sequence (Length: 3771bp) Protein sequence SNP |
|
Vector | pcDNA3.1-C-(k)DYK or customized vector | ![]() |
Clone information | Clone Map | ![]() |
Tag on pcDNA3.1+/C-(K)DYK | C terminal DYKDDDDK tags | |
ORF Insert Method | CloneEZ™ Seamless cloning technology | |
Insert Structure | linear | |
Update Date | 2019-08-07 | |
Organism | Mus musculus(house mouse) | |
Product | splicing factor, arginine/serine-rich 19 isoform X1 | |
Comment | Comment: MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NC_000073.6) annotated using gene prediction method: Gnomon, supported by mRNA and EST evidence. Also see: Documentation of NCBI's Annotation Process On Aug 8, 2019 this sequence version replaced XM_011250855.2. ##Genome-Annotation-Data-START## Annotation Provider :: NCBI Annotation Status :: Full annotation Annotation Name :: Mus musculus Annotation Release 108 Annotation Version :: 108 Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline Annotation Software Version :: 8.2 Annotation Method :: Best-placed RefSeq; Gnomon Features Annotated :: Gene; mRNA; CDS; ncRNA ##Genome-Annotation-Data-END## |
1 | ATGGAGGAGG AAGATGAGTC TCGAGGTAAA ACAGAGGAGT CGGGAGAGGA TCGGGGAGAC |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
RefSeq | XP_011249157.1 |
CDS | 463..4233 |
Translation |
Target ORF information:
Target ORF information:
|
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1 | ATGGAGGAGG AAGATGAGTC TCGAGGTAAA ACAGAGGAGT CGGGAGAGGA TCGGGGAGAC |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
CloneID | OMu10773 | |
Clone ID Related Accession (Same CDS sequence) | XM_011250855.1 , NM_001008422.1 , XM_011250855.3 , XM_006540821.2 , XM_006540821.3 , XM_006540821.4 , XM_011250855.2 , XM_030242466.1 , XM_006540820.2 | |
Accession Version | XM_006540821.2 | Documents for ORF clone product in default vector |
Sequence Information | ORF Nucleotide Sequence (Length: 3771bp) Protein sequence SNP |
|
Vector | pcDNA3.1-C-(k)DYK or customized vector | ![]() |
Clone information | Clone Map | ![]() |
Tag on pcDNA3.1+/C-(K)DYK | C terminal DYKDDDDK tags | |
ORF Insert Method | CloneEZ™ Seamless cloning technology | |
Insert Structure | linear | |
Update Date | 2015-02-08 | |
Organism | Mus musculus(House mouse) | |
Product | splicing factor, arginine/serine-rich 19 isoform X1 | |
Comment |
1 | ATGGAGGAGG AAGATGAGTC TCGAGGTAAA ACAGAGGAGT CGGGAGAGGA TCGGGGAGAC |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
RefSeq | XP_006540884.1 |
Translation |
Target ORF information:
Target ORF information:
|
![]() |
1 | ATGGAGGAGG AAGATGAGTC TCGAGGTAAA ACAGAGGAGT CGGGAGAGGA TCGGGGAGAC |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
CloneID | OMu10773 | |
Clone ID Related Accession (Same CDS sequence) | XM_011250855.1 , NM_001008422.1 , XM_011250855.3 , XM_006540821.2 , XM_006540821.3 , XM_006540821.4 , XM_011250855.2 , XM_030242466.1 , XM_006540820.2 | |
Accession Version | XM_006540821.3 | Documents for ORF clone product in default vector |
Sequence Information | ORF Nucleotide Sequence (Length: 3771bp) Protein sequence SNP |
|
Vector | pcDNA3.1-C-(k)DYK or customized vector | ![]() |
Clone information | Clone Map | ![]() |
Tag on pcDNA3.1+/C-(K)DYK | C terminal DYKDDDDK tags | |
ORF Insert Method | CloneEZ™ Seamless cloning technology | |
Insert Structure | linear | |
Update Date | 2016-06-21 | |
Organism | Mus musculus(house mouse) | |
Product | splicing factor, arginine/serine-rich 19 isoform X1 | |
Comment | Comment: MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NC_000073.6) annotated using gene prediction method: Gnomon, supported by mRNA and EST evidence. Also see: Documentation of NCBI's Annotation Process On Jun 22, 2016 this sequence version replaced XM_006540821.2. ##Genome-Annotation-Data-START## Annotation Provider :: NCBI Annotation Status :: Full annotation Annotation Version :: Mus musculus Annotation Release 106 Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline Annotation Software Version :: 7.1 Annotation Method :: Best-placed RefSeq; Gnomon Features Annotated :: Gene; mRNA; CDS; ncRNA ##Genome-Annotation-Data-END## |
1 | ATGGAGGAGG AAGATGAGTC TCGAGGTAAA ACAGAGGAGT CGGGAGAGGA TCGGGGAGAC |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
RefSeq | XP_006540884.1 |
CDS | 741..4511 |
Translation |
Target ORF information:
Target ORF information:
|
![]() |
1 | ATGGAGGAGG AAGATGAGTC TCGAGGTAAA ACAGAGGAGT CGGGAGAGGA TCGGGGAGAC |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
CloneID | OMu10773 | |
Clone ID Related Accession (Same CDS sequence) | XM_011250855.1 , NM_001008422.1 , XM_011250855.3 , XM_006540821.2 , XM_006540821.3 , XM_006540821.4 , XM_011250855.2 , XM_030242466.1 , XM_006540820.2 | |
Accession Version | XM_006540821.4 Latest version! | Documents for ORF clone product in default vector |
Sequence Information | ORF Nucleotide Sequence (Length: 3771bp) Protein sequence SNP |
|
Vector | pcDNA3.1-C-(k)DYK or customized vector | ![]() |
Clone information | Clone Map | ![]() |
Tag on pcDNA3.1+/C-(K)DYK | C terminal DYKDDDDK tags | |
ORF Insert Method | CloneEZ™ Seamless cloning technology | |
Insert Structure | linear | |
Update Date | 2019-08-07 | |
Organism | Mus musculus(house mouse) | |
Product | splicing factor, arginine/serine-rich 19 isoform X1 | |
Comment | Comment: MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NC_000073.6) annotated using gene prediction method: Gnomon, supported by mRNA and EST evidence. Also see: Documentation of NCBI's Annotation Process On Aug 8, 2019 this sequence version replaced XM_006540821.3. ##Genome-Annotation-Data-START## Annotation Provider :: NCBI Annotation Status :: Full annotation Annotation Name :: Mus musculus Annotation Release 108 Annotation Version :: 108 Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline Annotation Software Version :: 8.2 Annotation Method :: Best-placed RefSeq; Gnomon Features Annotated :: Gene; mRNA; CDS; ncRNA ##Genome-Annotation-Data-END## |
1 | ATGGAGGAGG AAGATGAGTC TCGAGGTAAA ACAGAGGAGT CGGGAGAGGA TCGGGGAGAC |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
RefSeq | XP_006540884.1 |
CDS | 768..4538 |
Translation |
Target ORF information:
Target ORF information:
|
![]() |
1 | ATGGAGGAGG AAGATGAGTC TCGAGGTAAA ACAGAGGAGT CGGGAGAGGA TCGGGGAGAC |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
CloneID | OMu10773 | |
Clone ID Related Accession (Same CDS sequence) | XM_011250855.1 , NM_001008422.1 , XM_011250855.3 , XM_006540821.2 , XM_006540821.3 , XM_006540821.4 , XM_011250855.2 , XM_030242466.1 , XM_006540820.2 | |
Accession Version | XM_011250855.2 | Documents for ORF clone product in default vector |
Sequence Information | ORF Nucleotide Sequence (Length: 3771bp) Protein sequence SNP |
|
Vector | pcDNA3.1-C-(k)DYK or customized vector | ![]() |
Clone information | Clone Map | ![]() |
Tag on pcDNA3.1+/C-(K)DYK | C terminal DYKDDDDK tags | |
ORF Insert Method | CloneEZ™ Seamless cloning technology | |
Insert Structure | linear | |
Update Date | 2016-06-21 | |
Organism | Mus musculus(house mouse) | |
Product | splicing factor, arginine/serine-rich 19 isoform X1 | |
Comment | Comment: MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NC_000073.6) annotated using gene prediction method: Gnomon, supported by mRNA and EST evidence. Also see: Documentation of NCBI's Annotation Process On Jun 22, 2016 this sequence version replaced XM_011250855.1. ##Genome-Annotation-Data-START## Annotation Provider :: NCBI Annotation Status :: Full annotation Annotation Version :: Mus musculus Annotation Release 106 Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline Annotation Software Version :: 7.1 Annotation Method :: Best-placed RefSeq; Gnomon Features Annotated :: Gene; mRNA; CDS; ncRNA ##Genome-Annotation-Data-END## |
1 | ATGGAGGAGG AAGATGAGTC TCGAGGTAAA ACAGAGGAGT CGGGAGAGGA TCGGGGAGAC |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
RefSeq | XP_011249157.1 |
CDS | 418..4188 |
Translation |
Target ORF information:
Target ORF information:
|
![]() |
1 | ATGGAGGAGG AAGATGAGTC TCGAGGTAAA ACAGAGGAGT CGGGAGAGGA TCGGGGAGAC |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
CloneID | OMu10773 | |
Clone ID Related Accession (Same CDS sequence) | XM_011250855.1 , NM_001008422.1 , XM_011250855.3 , XM_006540821.2 , XM_006540821.3 , XM_006540821.4 , XM_011250855.2 , XM_030242466.1 , XM_006540820.2 | |
Accession Version | XM_030242466.1 Latest version! | Documents for ORF clone product in default vector |
Sequence Information | ORF Nucleotide Sequence (Length: 3771bp) Protein sequence SNP |
|
Vector | pcDNA3.1-C-(k)DYK or customized vector | ![]() |
Clone information | Clone Map | ![]() |
Tag on pcDNA3.1+/C-(K)DYK | C terminal DYKDDDDK tags | |
ORF Insert Method | CloneEZ™ Seamless cloning technology | |
Insert Structure | linear | |
Update Date | 2019-08-07 | |
Organism | Mus musculus(house mouse) | |
Product | splicing factor, arginine/serine-rich 19 isoform X1 | |
Comment | Comment: MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NC_000073.6) annotated using gene prediction method: Gnomon, supported by mRNA and EST evidence. Also see: Documentation of NCBI's Annotation Process ##Genome-Annotation-Data-START## Annotation Provider :: NCBI Annotation Status :: Full annotation Annotation Name :: Mus musculus Annotation Release 108 Annotation Version :: 108 Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline Annotation Software Version :: 8.2 Annotation Method :: Best-placed RefSeq; Gnomon Features Annotated :: Gene; mRNA; CDS; ncRNA ##Genome-Annotation-Data-END## |
1 | ATGGAGGAGG AAGATGAGTC TCGAGGTAAA ACAGAGGAGT CGGGAGAGGA TCGGGGAGAC |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
RefSeq | XP_030098326.1 |
CDS | 637..4407 |
Translation |
Target ORF information:
Target ORF information:
|
![]() |
1 | ATGGAGGAGG AAGATGAGTC TCGAGGTAAA ACAGAGGAGT CGGGAGAGGA TCGGGGAGAC |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
CloneID | OMu10773 | |
Clone ID Related Accession (Same CDS sequence) | XM_011250855.1 , NM_001008422.1 , XM_011250855.3 , XM_006540821.2 , XM_006540821.3 , XM_006540821.4 , XM_011250855.2 , XM_030242466.1 , XM_006540820.2 | |
Accession Version | XM_006540820.2 Latest version! | Documents for ORF clone product in default vector |
Sequence Information | ORF Nucleotide Sequence (Length: 3771bp) Protein sequence SNP |
|
Vector | pcDNA3.1-C-(k)DYK or customized vector | ![]() |
Clone information | Clone Map | ![]() |
Tag on pcDNA3.1+/C-(K)DYK | C terminal DYKDDDDK tags | |
ORF Insert Method | CloneEZ™ Seamless cloning technology | |
Insert Structure | linear | |
Update Date | 2015-02-08 | |
Organism | Mus musculus(House mouse) | |
Product | splicing factor, arginine/serine-rich 19 isoform X1 | |
Comment |
1 | ATGGAGGAGG AAGATGAGTC TCGAGGTAAA ACAGAGGAGT CGGGAGAGGA TCGGGGAGAC |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
RefSeq | XP_006540883.1 |
Translation |
Target ORF information:
Target ORF information:
|
![]() |
1 | ATGGAGGAGG AAGATGAGTC TCGAGGTAAA ACAGAGGAGT CGGGAGAGGA TCGGGGAGAC |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
Malondialdehyde-acetaldehyde (MAA) adducted surfactant protein induced lung inflammation is mediated through scavenger receptor a (SR-A1). |