Gene Symbol | Spg21 |
Entrez Gene ID | 27965 |
Full Name | SPG21, maspardin |
Synonyms | ACP33,BM-019,C78576,D9Wsu18e,GL010,MAST |
General protein information |
|
Gene Type | protein-coding |
Organism | Mus musculus(house mouse) |
Genome |
ORF » Species Summary » Mus musculus » Spg21 cDNA ORF clone
Gene Symbol | Spg21 |
Entrez Gene ID | 27965 |
Full Name | SPG21, maspardin |
Synonyms | ACP33,BM-019,C78576,D9Wsu18e,GL010,MAST |
General protein information |
|
Gene Type | protein-coding |
Organism | Mus musculus(house mouse) |
Genome |
mRNA | Protein | Name |
---|---|---|
NM_001357813.1 | NP_001344742.1 | maspardin |
XM_006511222.2 | XP_006511285.1 | maspardin isoform X1 |
XM_006511222.3 | XP_006511285.1 | maspardin isoform X1 |
XM_030244409.1 | XP_030100269.1 | maspardin isoform X1 |
NM_138584.2 | NP_613050.1 | maspardin |
Canis lupus familiaris (dog) | SPG21 | XP_852491.3 |
Mus musculus (house mouse) | Spg21 | NP_613050.1 |
Arabidopsis thaliana (thale cress) | AT4G12230 | NP_192960.1 |
Oryza sativa (rice) | Os10g0169800 | NP_001064230.1 |
Homo sapiens (human) | SPG21 | NP_001121361.1 |
Pan troglodytes (chimpanzee) | SPG21 | XP_510477.3 |
Rattus norvegicus (Norway rat) | Spg21 | NP_001006988.1 |
SPG21 | XP_001101919.2 | |
Bos taurus (cattle) | SPG21 | NP_991341.1 |
Gallus gallus (chicken) | SPG21 | NP_001185532.1 |
Danio rerio (zebrafish) | spg21 | NP_998560.1 |
Xenopus tropicalis (tropical clawed frog) | spg21 | NP_001017126.1 |
Loss of Maspardin Attenuates the Growth and Maturation of Mouse Cortical Neurons.
Davenport A, Bivona A, Latson W, Lemanski LF, Cheriyath V
Neuro-degenerative diseases16(3-4)260-72(2016)
Targeted disruption of the Mast syndrome gene SPG21 in mice impairs hind limb function and alters axon branching in cultured cortical neurons.
Soderblom C, Stadler J, Jupille H, Blackstone C, Shupliakov O, Hanna MC
Neurogenetics11(4)369-78(2010 Oct)
On the integration of alcohol-related quantitative trait loci and gene expression analyses.
Hitzemann R, Reed C, Malmanger B, Lawler M, Hitzemann B, Cunningham B, McWeeney S, Belknap J, Harrington C, Buck K, Phillips T, Crabbe J
Alcoholism, clinical and experimental research28(10)1437-48(2004 Oct)
Cloning of ACP33 as a novel intracellular ligand of CD4.
Zeitlmann L, Sirim P, Kremmer E, Kolanus W
The Journal of biological chemistry276(12)9123-32(2001 Mar)
Genome-wide mapping of unselected transcripts from extraembryonic tissue of 7.5-day mouse embryos reveals enrichment in the t-complex and under-representation on the X chromosome.
Ko MS, Threat TA, Wang X, Horton JH, Cui Y, Wang X, Pryor E, Paris J, Wells-Smith J, Kitchen JR, Rowe LB, Eppig J, Satoh T, Brant L, Fujiwara H, Yotsumoto S, Nakashima H
Human molecular genetics7(12)1967-78(1998 Nov)
GeneRIFs: Gene References Into Functions What's a GeneRIF?
Study showed that the loss of maspardin attenuates the growth, maturation, and axonal branching of cortical neurons to promote progressive neuronal dysfunction; impairment of sensory motor neurons in SPG21-/- mice; and that SPG21-/- cortical neurons failed to respond to EGF-induced growth and maturation, which is confirmed by the attenuated expression of a subset of EGFR target genes
Title: Loss of Maspardin Attenuates the Growth and Maturation of Mouse Cortical Neurons.
Mast syndrome gene SPG21 in mice has a role in hind limb function and axon branching in cultured cortical neurons
Title: Targeted disruption of the Mast syndrome gene SPG21 in mice impairs hind limb function and alters axon branching in cultured cortical neurons.
The following Spg21 gene cDNA ORF clone sequences were retrieved from the NCBI Reference Sequence Database (RefSeq). These sequences represent the protein coding region of the Spg21 cDNA ORF which is encoded by the open reading frame (ORF) sequence. ORF sequences can be delivered in our standard vector, pcDNA3.1+/C-(K)DYK or the vector of your choice as an expression/transfection-ready ORF clone. Not the clone you want? Click here to find your clone.
CloneID | OMu10781 | |
Clone ID Related Accession (Same CDS sequence) | NM_001357813.1 , XM_006511222.2 , XM_006511222.3 , XM_030244409.1 , NM_138584.2 | |
Accession Version | NM_001357813.1 Latest version! | Documents for ORF clone product in default vector |
Sequence Information | ORF Nucleotide Sequence (Length: 927bp) Protein sequence SNP |
|
Vector | pcDNA3.1-C-(k)DYK or customized vector | User Manual |
Clone information | Clone Map | MSDS |
Tag on pcDNA3.1+/C-(K)DYK | C terminal DYKDDDDK tags | |
ORF Insert Method | CloneEZ™ Seamless cloning technology | |
Insert Structure | linear | |
Update Date | 2019-10-22 | |
Organism | Mus musculus(house mouse) | |
Product | maspardin | |
Comment | Comment: VALIDATED REFSEQ: This record has undergone validation or preliminary review. The reference sequence was derived from AC114645.9. On Nov 10, 2017 this sequence version replaced XM_006511222.3. Transcript Variant: This variant (2) differs in the 5' UTR compared to variant 1. Variants 1 and 2 both encode the same protein. Sequence Note: The RefSeq transcript and protein were derived from genomic sequence to make the sequence consistent with the reference genome assembly. The genomic coordinates used for the transcript record were based on alignments. ##Evidence-Data-START## Transcript exon combination :: SRR1660821.198509.1, SRR1660817.306695.1 [ECO:0000332] RNAseq introns :: single sample supports all introns SAMN00849375, SAMN00849383 [ECO:0000348] ##Evidence-Data-END## COMPLETENESS: complete on the 3' end. |
1 | ATGGGAGAGA TCAAAGTCTC TCCAGATTAT AATTGGTTTA GAAGTACTGT TCCCCTGAAA |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
RefSeq | NP_001344742.1 |
CDS | 229..1155 |
Translation |
Target ORF information:
Target ORF information:
|
NM_001357813.1 |
1 | ATGGGAGAGA TCAAAGTCTC TCCAGATTAT AATTGGTTTA GAAGTACTGT TCCCCTGAAA |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
CloneID | OMu10781 | |
Clone ID Related Accession (Same CDS sequence) | NM_001357813.1 , XM_006511222.2 , XM_006511222.3 , XM_030244409.1 , NM_138584.2 | |
Accession Version | NM_138584.2 Latest version! | Documents for ORF clone product in default vector |
Sequence Information | ORF Nucleotide Sequence (Length: 927bp) Protein sequence SNP |
|
Vector | pcDNA3.1-C-(k)DYK or customized vector | User Manual |
Clone information | Clone Map | MSDS |
Tag on pcDNA3.1+/C-(K)DYK | C terminal DYKDDDDK tags | |
ORF Insert Method | CloneEZ™ Seamless cloning technology | |
Insert Structure | linear | |
Update Date | 2019-09-23 | |
Organism | Mus musculus(house mouse) | |
Product | maspardin | |
Comment | Comment: VALIDATED REFSEQ: This record has undergone validation or preliminary review. The reference sequence was derived from AK150215.1 and AK149930.1. On Feb 28, 2006 this sequence version replaced NM_138584.1. Transcript Variant: This variant (1) represents the longer transcript. Variants 1 and 2 both encode the same protein. ##Evidence-Data-START## Transcript exon combination :: AK149930.1, BC132377.1 [ECO:0000332] RNAseq introns :: single sample supports all introns SAMN00849374, SAMN00849375 [ECO:0000348] ##Evidence-Data-END## COMPLETENESS: complete on the 3' end. |
1 | ATGGGAGAGA TCAAAGTCTC TCCAGATTAT AATTGGTTTA GAAGTACTGT TCCCCTGAAA |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
RefSeq | NP_613050.1 |
CDS | 243..1169 |
Translation |
Target ORF information:
Target ORF information:
|
NM_138584.2 |
1 | ATGGGAGAGA TCAAAGTCTC TCCAGATTAT AATTGGTTTA GAAGTACTGT TCCCCTGAAA |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
CloneID | OMu10781 | |
Clone ID Related Accession (Same CDS sequence) | NM_001357813.1 , XM_006511222.2 , XM_006511222.3 , XM_030244409.1 , NM_138584.2 | |
Accession Version | XM_006511222.2 | Documents for ORF clone product in default vector |
Sequence Information | ORF Nucleotide Sequence (Length: 927bp) Protein sequence SNP |
|
Vector | pcDNA3.1-C-(k)DYK or customized vector | User Manual |
Clone information | Clone Map | MSDS |
Tag on pcDNA3.1+/C-(K)DYK | C terminal DYKDDDDK tags | |
ORF Insert Method | CloneEZ™ Seamless cloning technology | |
Insert Structure | linear | |
Update Date | 2015-02-08 | |
Organism | Mus musculus(House mouse) | |
Product | maspardin isoform X1 | |
Comment |
1 | ATGGGAGAGA TCAAAGTCTC TCCAGATTAT AATTGGTTTA GAAGTACTGT TCCCCTGAAA |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
RefSeq | XP_006511285.1 |
Translation |
Target ORF information:
Target ORF information:
|
XM_006511222.2 |
1 | ATGGGAGAGA TCAAAGTCTC TCCAGATTAT AATTGGTTTA GAAGTACTGT TCCCCTGAAA |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
CloneID | OMu10781 | |
Clone ID Related Accession (Same CDS sequence) | NM_001357813.1 , XM_006511222.2 , XM_006511222.3 , XM_030244409.1 , NM_138584.2 | |
Accession Version | XM_006511222.3 Latest version! | Documents for ORF clone product in default vector |
Sequence Information | ORF Nucleotide Sequence (Length: 927bp) Protein sequence SNP |
|
Vector | pcDNA3.1-C-(k)DYK or customized vector | User Manual |
Clone information | Clone Map | MSDS |
Tag on pcDNA3.1+/C-(K)DYK | C terminal DYKDDDDK tags | |
ORF Insert Method | CloneEZ™ Seamless cloning technology | |
Insert Structure | linear | |
Update Date | 2016-06-21 | |
Organism | Mus musculus(House mouse) | |
Product | maspardin isoform X1 | |
Comment | MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NC_000075.6) annotated using gene prediction method: Gnomon, supported by mRNA and EST evidence. Also see: Documentation of NCBI's Annotation Process On Jun 22, 2016 this sequence version replaced XM_006511222.2. ##Genome-Annotation-Data-START## Annotation Provider :: NCBI Annotation Status :: Full annotation Annotation Version :: Mus musculus Annotation Release 106 Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline Annotation Software Version :: 7.1 Annotation Method :: Best-placed RefSeq; Gnomon Features Annotated :: Gene; mRNA; CDS; ncRNA ##Genome-Annotation-Data-END## |
1 | ATGGGAGAGA TCAAAGTCTC TCCAGATTAT AATTGGTTTA GAAGTACTGT TCCCCTGAAA |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
RefSeq | XP_006511285.1 |
CDS | 224..1150 |
Translation |
Target ORF information:
Target ORF information:
|
XM_006511222.3 |
1 | ATGGGAGAGA TCAAAGTCTC TCCAGATTAT AATTGGTTTA GAAGTACTGT TCCCCTGAAA |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
CloneID | OMu10781 | |
Clone ID Related Accession (Same CDS sequence) | NM_001357813.1 , XM_006511222.2 , XM_006511222.3 , XM_030244409.1 , NM_138584.2 | |
Accession Version | XM_030244409.1 Latest version! | Documents for ORF clone product in default vector |
Sequence Information | ORF Nucleotide Sequence (Length: 927bp) Protein sequence SNP |
|
Vector | pcDNA3.1-C-(k)DYK or customized vector | User Manual |
Clone information | Clone Map | MSDS |
Tag on pcDNA3.1+/C-(K)DYK | C terminal DYKDDDDK tags | |
ORF Insert Method | CloneEZ™ Seamless cloning technology | |
Insert Structure | linear | |
Update Date | 2019-08-07 | |
Organism | Mus musculus(house mouse) | |
Product | maspardin isoform X1 | |
Comment | Comment: MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NC_000075.6) annotated using gene prediction method: Gnomon, supported by mRNA and EST evidence. Also see: Documentation of NCBI's Annotation Process ##Genome-Annotation-Data-START## Annotation Provider :: NCBI Annotation Status :: Full annotation Annotation Name :: Mus musculus Annotation Release 108 Annotation Version :: 108 Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline Annotation Software Version :: 8.2 Annotation Method :: Best-placed RefSeq; Gnomon Features Annotated :: Gene; mRNA; CDS; ncRNA ##Genome-Annotation-Data-END## |
1 | ATGGGAGAGA TCAAAGTCTC TCCAGATTAT AATTGGTTTA GAAGTACTGT TCCCCTGAAA |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
RefSeq | XP_030100269.1 |
CDS | 1729..2655 |
Translation |
Target ORF information:
Target ORF information:
|
XM_030244409.1 |
1 | ATGGGAGAGA TCAAAGTCTC TCCAGATTAT AATTGGTTTA GAAGTACTGT TCCCCTGAAA |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
Loss of Maspardin Attenuates the Growth and Maturation of Mouse Cortical Neurons. |
Targeted disruption of the Mast syndrome gene SPG21 in mice impairs hind limb function and alters axon branching in cultured cortical neurons. |
On the integration of alcohol-related quantitative trait loci and gene expression analyses. |
Cloning of ACP33 as a novel intracellular ligand of CD4. |
Genome-wide mapping of unselected transcripts from extraembryonic tissue of 7.5-day mouse embryos reveals enrichment in the t-complex and under-representation on the X chromosome. |