Gene Symbol | Dppa1 |
Entrez Gene ID | 347708 |
Full Name | developmental pluripotency associated 1 |
Synonyms | C77727 |
General protein information |
|
Gene Type | protein-coding |
Organism | Mus musculus(house mouse) |
Genome |
ORF » Species Summary » Mus musculus » Dppa1 cDNA ORF clone
Gene Symbol | Dppa1 |
Entrez Gene ID | 347708 |
Full Name | developmental pluripotency associated 1 |
Synonyms | C77727 |
General protein information |
|
Gene Type | protein-coding |
Organism | Mus musculus(house mouse) |
Genome |
mRNA | Protein | Name |
---|---|---|
NM_001163358.1 | NP_001156830.1 | developmental pluripotency associated 1 precursor |
XM_017314620.1 | XP_017170109.1 | developmental pluripotency associated 1 isoform X1 |
NM_178247.3 | NP_839978.1 | developmental pluripotency associated 1 precursor |
XM_017314620.2 | XP_017170109.1 | developmental pluripotency associated 1 isoform X1 |
High-throughput discovery of novel developmental phenotypes.
Dickinson ME, Flenniken AM, Ji X, Teboul L, Wong MD, White JK, Meehan TF, Weninger WJ, Westerberg H, Adissu H, Baker CN, Bower L, Brown JM, Caddle LB, Chiani F, Clary D, Cleak J, Daly MJ, Denegre JM, Doe B, Dolan ME, Edie SM, Fuchs H, Gailus-Durner V, Galli A, Gambadoro A, Gallegos J, Guo S, Horner NR, Hsu CW, Johnson SJ, Kalaga S, Keith LC, Lanoue L, Lawson TN, Lek M, Mark M, Marschall S, Mason J, McElwee ML, Newbigging S, Nutter LM, Peterson KA, Ramirez-Solis R, Rowland DJ, Ryder E, Samocha KE, Seavitt JR, Selloum M, Szoke-Kovacs Z, Tamura M, Trainor AG, Tudose I, Wakana S, Warren J, Wendling O, West DB, Wong L, Yoshiki A, , , , , , , , , MacArthur DG, Tocchini-Valentini GP, Gao X, Flicek P, Bradley A, Skarnes WC, Justice MJ, Parkinson HE, Moore M, Wells S, Braun RE, Svenson KL, de Angelis MH, Herault Y, Mohun T, Mallon AM, Henkelman RM, Brown SD, Adams DJ, Lloyd KC, McKerlie C, Beaudet AL, Bu?an M, Murray SA
Nature537(7621)508-514(2016 09)
The ability of inner-cell-mass cells to self-renew as embryonic stem cells is acquired following epiblast specification.
Boroviak T, Loos R, Bertone P, Smith A, Nichols J
Nature cell biology16(6)516-28(2014 Jun)
The International Mouse Phenotyping Consortium Web Portal, a unified point of access for knockout mice and related phenotyping data.
Koscielny G, Yaikhom G, Iyer V, Meehan TF, Morgan H, Atienza-Herrero J, Blake A, Chen CK, Easty R, Di Fenza A, Fiegel T, Grifiths M, Horne A, Karp NA, Kurbatova N, Mason JC, Matthews P, Oakley DJ, Qazi A, Regnart J, Retha A, Santos LA, Sneddon DJ, Warren J, Westerberg H, Wilson RJ, Melvin DG, Smedley D, Brown SD, Flicek P, Skarnes WC, Mallon AM, Parkinson H
Nucleic acids research42(Database issue)D802-9(2014 Jan)
Deterministic and stochastic allele specific gene expression in single mouse blastomeres.
Tang F, Barbacioru C, Nordman E, Bao S, Lee C, Wang X, Tuch BB, Heard E, Lao K, Surani MA
PloS one6(6)e21208(2011)
Incomplete reactivation of Oct4-related genes in mouse embryos cloned from somatic nuclei.
Bortvin A, Eggan K, Skaletsky H, Akutsu H, Berry DL, Yanagimachi R, Page DC, Jaenisch R
Development (Cambridge, England)130(8)1673-80(2003 Apr)
GeneRIFs: Gene References Into Functions What's a GeneRIF?
The following Dppa1 gene cDNA ORF clone sequences were retrieved from the NCBI Reference Sequence Database (RefSeq). These sequences represent the protein coding region of the Dppa1 cDNA ORF which is encoded by the open reading frame (ORF) sequence. ORF sequences can be delivered in our standard vector, pcDNA3.1+/C-(K)DYK or the vector of your choice as an expression/transfection-ready ORF clone. Not the clone you want? Click here to find your clone.
CloneID | OMu12942 | |
Clone ID Related Accession (Same CDS sequence) | NM_001163358.1 , NM_178247.3 | |
Accession Version | NM_001163358.1 Latest version! | Documents for ORF clone product in default vector |
Sequence Information | ORF Nucleotide Sequence (Length: 351bp) Protein sequence SNP |
|
Vector | pcDNA3.1-C-(k)DYK or customized vector | User Manual |
Clone information | Clone Map | MSDS |
Tag on pcDNA3.1+/C-(K)DYK | C terminal DYKDDDDK tags | |
ORF Insert Method | CloneEZ™ Seamless cloning technology | |
Insert Structure | linear | |
Update Date | 2018-05-25 | |
Organism | Mus musculus(house mouse) | |
Product | developmental pluripotency associated 1 precursor | |
Comment | Comment: VALIDATED REFSEQ: This record has undergone validation or preliminary review. The reference sequence was derived from AL669948.8. Transcript Variant: This variant (2) lacks an alternate segment in the 5' UTR, compared to variant 1. Variants 1 and 2 encode the same protein. Sequence Note: The RefSeq transcript and protein were derived from genomic sequence to make the sequence consistent with the reference genome assembly. The genomic coordinates used for the transcript record were based on alignments. ##Evidence-Data-START## Transcript exon combination :: C88843.1, AA624210.1 [ECO:0000332] RNAseq introns :: single sample supports all introns SAMN01164134 [ECO:0000348] ##Evidence-Data-END## |
1 | ATGATGTCCC TTCAAGTCCT CATTTCAGGC CTCCTACTCC TTCTCCCAGC AGTTTGGAGC |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
RefSeq | NP_001156830.1 |
CDS | 60..410 |
Translation |
Target ORF information:
Target ORF information:
|
NM_001163358.1 |
1 | ATGATGTCCC TTCAAGTCCT CATTTCAGGC CTCCTACTCC TTCTCCCAGC AGTTTGGAGC |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
CloneID | OMu12942 | |
Clone ID Related Accession (Same CDS sequence) | NM_001163358.1 , NM_178247.3 | |
Accession Version | NM_178247.3 Latest version! | Documents for ORF clone product in default vector |
Sequence Information | ORF Nucleotide Sequence (Length: 351bp) Protein sequence SNP |
|
Vector | pcDNA3.1-C-(k)DYK or customized vector | User Manual |
Clone information | Clone Map | MSDS |
Tag on pcDNA3.1+/C-(K)DYK | C terminal DYKDDDDK tags | |
ORF Insert Method | CloneEZ™ Seamless cloning technology | |
Insert Structure | linear | |
Update Date | 2018-05-25 | |
Organism | Mus musculus(house mouse) | |
Product | developmental pluripotency associated 1 precursor | |
Comment | Comment: VALIDATED REFSEQ: This record has undergone validation or preliminary review. The reference sequence was derived from AL669948.8. On Jul 17, 2009 this sequence version replaced NM_178247.2. Transcript Variant: This variant (1) represents the longer transcript. Variants 1 and 2 encode the same protein. Sequence Note: The RefSeq transcript and protein were derived from genomic sequence to make the sequence consistent with the reference genome assembly. The genomic coordinates used for the transcript record were based on alignments. ##Evidence-Data-START## Transcript exon combination :: AK145642.1, BY736262.1 [ECO:0000332] RNAseq introns :: mixed/partial sample support SAMN00849374, SAMN00849383 [ECO:0000350] ##Evidence-Data-END## |
1 | ATGATGTCCC TTCAAGTCCT CATTTCAGGC CTCCTACTCC TTCTCCCAGC AGTTTGGAGC |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
RefSeq | NP_839978.1 |
CDS | 146..496 |
Translation |
Target ORF information:
Target ORF information:
|
NM_178247.3 |
1 | ATGATGTCCC TTCAAGTCCT CATTTCAGGC CTCCTACTCC TTCTCCCAGC AGTTTGGAGC |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
CloneID | OMu77951 | |
Clone ID Related Accession (Same CDS sequence) | XM_017314620.1 , XM_017314620.2 | |
Accession Version | XM_017314620.1 | Documents for ORF clone product in default vector |
Sequence Information | ORF Nucleotide Sequence (Length: 348bp) Protein sequence SNP |
|
Vector | pcDNA3.1-C-(k)DYK or customized vector | User Manual |
Clone information | Clone Map | MSDS |
Tag on pcDNA3.1+/C-(K)DYK | C terminal DYKDDDDK tags | |
ORF Insert Method | CloneEZ™ Seamless cloning technology | |
Insert Structure | linear | |
Update Date | 2016-06-21 | |
Organism | Mus musculus(house mouse) | |
Product | developmental pluripotency associated 1 isoform X1 | |
Comment | Comment: MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NC_000077.6) annotated using gene prediction method: Gnomon, supported by mRNA and EST evidence. Also see: Documentation of NCBI's Annotation Process ##Genome-Annotation-Data-START## Annotation Provider :: NCBI Annotation Status :: Full annotation Annotation Version :: Mus musculus Annotation Release 106 Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline Annotation Software Version :: 7.1 Annotation Method :: Best-placed RefSeq; Gnomon Features Annotated :: Gene; mRNA; CDS; ncRNA ##Genome-Annotation-Data-END## |
1 | ATGATGTCCC TTCAAGTCCT CATTTCAGGC CTCCTACTCC TTCTCCCAGT TTGGAGCACC |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
RefSeq | XP_017170109.1 |
CDS | 146..493 |
Translation |
Target ORF information:
Target ORF information:
|
XM_017314620.1 |
1 | ATGATGTCCC TTCAAGTCCT CATTTCAGGC CTCCTACTCC TTCTCCCAGT TTGGAGCACC |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
CloneID | OMu77951 | |
Clone ID Related Accession (Same CDS sequence) | XM_017314620.1 , XM_017314620.2 | |
Accession Version | XM_017314620.2 Latest version! | Documents for ORF clone product in default vector |
Sequence Information | ORF Nucleotide Sequence (Length: 348bp) Protein sequence SNP |
|
Vector | pcDNA3.1-C-(k)DYK or customized vector | User Manual |
Clone information | Clone Map | MSDS |
Tag on pcDNA3.1+/C-(K)DYK | C terminal DYKDDDDK tags | |
ORF Insert Method | CloneEZ™ Seamless cloning technology | |
Insert Structure | linear | |
Update Date | 2019-08-07 | |
Organism | Mus musculus(house mouse) | |
Product | developmental pluripotency associated 1 isoform X1 | |
Comment | Comment: MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NC_000077.6) annotated using gene prediction method: Gnomon, supported by mRNA and EST evidence. Also see: Documentation of NCBI's Annotation Process On Aug 8, 2019 this sequence version replaced XM_017314620.1. ##Genome-Annotation-Data-START## Annotation Provider :: NCBI Annotation Status :: Full annotation Annotation Name :: Mus musculus Annotation Release 108 Annotation Version :: 108 Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline Annotation Software Version :: 8.2 Annotation Method :: Best-placed RefSeq; Gnomon Features Annotated :: Gene; mRNA; CDS; ncRNA ##Genome-Annotation-Data-END## |
1 | ATGATGTCCC TTCAAGTCCT CATTTCAGGC CTCCTACTCC TTCTCCCAGT TTGGAGCACC |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
RefSeq | XP_017170109.1 |
CDS | 146..493 |
Translation |
Target ORF information:
Target ORF information:
|
XM_017314620.2 |
1 | ATGATGTCCC TTCAAGTCCT CATTTCAGGC CTCCTACTCC TTCTCCCAGT TTGGAGCACC |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
High-throughput discovery of novel developmental phenotypes. |
The ability of inner-cell-mass cells to self-renew as embryonic stem cells is acquired following epiblast specification. |
The International Mouse Phenotyping Consortium Web Portal, a unified point of access for knockout mice and related phenotyping data. |
Deterministic and stochastic allele specific gene expression in single mouse blastomeres. |
Incomplete reactivation of Oct4-related genes in mouse embryos cloned from somatic nuclei. |