Gene Symbol | Lca5l |
Entrez Gene ID | 385668 |
Full Name | Leber congenital amaurosis 5-like |
Synonyms | 4921526F01Rik,Lcca5l |
General protein information |
|
Gene Type | protein-coding |
Organism | Mus musculus(house mouse) |
Genome |
ORF » Species Summary » Mus musculus » Lca5l cDNA ORF clone
gRNAs
Gene Symbol | Lca5l |
Entrez Gene ID | 385668 |
Full Name | Leber congenital amaurosis 5-like |
Synonyms | 4921526F01Rik,Lcca5l |
General protein information |
|
Gene Type | protein-coding |
Organism | Mus musculus(house mouse) |
Genome |
mRNA | Protein | Name |
---|---|---|
XM_006523061.3 | XP_006523124.1 | lebercilin-like protein isoform X1 |
XM_006523062.3 | XP_006523125.1 | lebercilin-like protein isoform X2 |
XM_006523062.4 | XP_006523125.1 | lebercilin-like protein isoform X2 |
XM_006523061.4 | XP_006523124.1 | lebercilin-like protein isoform X1 |
NM_001001492.2 | NP_001001492.2 | lebercilin-like protein |
Phylogenetic-based propagation of functional annotations within the Gene Ontology consortium.
Gaudet P, Livstone MS, Lewis SE, Thomas PD
Briefings in bioinformatics12(5)449-62(2011 Sep)
GeneRIFs: Gene References Into Functions What's a GeneRIF?
The following Lca5l gene cDNA ORF clone sequences were retrieved from the NCBI Reference Sequence Database (RefSeq). These sequences represent the protein coding region of the Lca5l cDNA ORF which is encoded by the open reading frame (ORF) sequence. ORF sequences can be delivered in our standard vector, pcDNA3.1+/C-(K)DYK or the vector of your choice as an expression/transfection-ready ORF clone. Not the clone you want? Click here to find your clone.
CloneID | OMu10377 | |
Clone ID Related Accession (Same CDS sequence) | NM_001001492.2 | |
Accession Version | NM_001001492.2 Latest version! | Documents for ORF clone product in default vector |
Sequence Information | ORF Nucleotide Sequence (Length: 2208bp) Protein sequence SNP |
|
Vector | pcDNA3.1-C-(k)DYK or customized vector | ![]() |
Clone information | Clone Map | ![]() |
Tag on pcDNA3.1+/C-(K)DYK | C terminal DYKDDDDK tags | |
ORF Insert Method | CloneEZ™ Seamless cloning technology | |
Insert Structure | linear | |
Update Date | 2019-01-19 | |
Organism | Mus musculus(house mouse) | |
Product | lebercilin-like protein | |
Comment | Comment: VALIDATED REFSEQ: This record has undergone validation or preliminary review. The reference sequence was derived from AC164647.3 and AK029554.1. On Feb 7, 2007 this sequence version replaced NM_001001492.1. ##Evidence-Data-START## Transcript exon combination :: AK029554.1 [ECO:0000332] RNAseq introns :: mixed/partial sample support SAMN00849374, SAMN00849377 [ECO:0000350] ##Evidence-Data-END## |
1 | ATGAGGTTGT GGACTATGTC TTTGGCTGAT ACAACAGAAG CACACACAAA CGAGCATTTC |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
RefSeq | NP_001001492.2 |
CDS | 301..2508 |
Translation |
Target ORF information:
Target ORF information:
|
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1 | ATGAGGTTGT GGACTATGTC TTTGGCTGAT ACAACAGAAG CACACACAAA CGAGCATTTC |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
CloneID | OMu52776 | |
Clone ID Related Accession (Same CDS sequence) | XM_006523061.3 , XM_006523061.4 | |
Accession Version | XM_006523061.3 | Documents for ORF clone product in default vector |
Sequence Information | ORF Nucleotide Sequence (Length: 2205bp) Protein sequence SNP |
|
Vector | pcDNA3.1-C-(k)DYK or customized vector | ![]() |
Clone information | Clone Map | ![]() |
Tag on pcDNA3.1+/C-(K)DYK | C terminal DYKDDDDK tags | |
ORF Insert Method | CloneEZ™ Seamless cloning technology | |
Insert Structure | linear | |
Update Date | 2016-06-21 | |
Organism | Mus musculus(house mouse) | |
Product | lebercilin-like protein isoform X1 | |
Comment | Comment: MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NC_000082.6) annotated using gene prediction method: Gnomon, supported by mRNA and EST evidence. Also see: Documentation of NCBI's Annotation Process On Jun 22, 2016 this sequence version replaced XM_006523061.2. ##Genome-Annotation-Data-START## Annotation Provider :: NCBI Annotation Status :: Full annotation Annotation Version :: Mus musculus Annotation Release 106 Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline Annotation Software Version :: 7.1 Annotation Method :: Best-placed RefSeq; Gnomon Features Annotated :: Gene; mRNA; CDS; ncRNA ##Genome-Annotation-Data-END## |
1 | ATGAGGTTGT GGACTATGTC TTTGGCTGAT ACAACAGAAG CACACACAAA CGAGCATTTC |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
RefSeq | XP_006523124.1 |
CDS | 301..2505 |
Translation |
Target ORF information:
Target ORF information:
|
![]() |
1 | ATGAGGTTGT GGACTATGTC TTTGGCTGAT ACAACAGAAG CACACACAAA CGAGCATTTC |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
CloneID | OMu52777 | |
Clone ID Related Accession (Same CDS sequence) | XM_006523062.3 , XM_006523062.4 | |
Accession Version | XM_006523062.3 | Documents for ORF clone product in default vector |
Sequence Information | ORF Nucleotide Sequence (Length: 2193bp) Protein sequence SNP |
|
Vector | pcDNA3.1-C-(k)DYK or customized vector | ![]() |
Clone information | Clone Map | ![]() |
Tag on pcDNA3.1+/C-(K)DYK | C terminal DYKDDDDK tags | |
ORF Insert Method | CloneEZ™ Seamless cloning technology | |
Insert Structure | linear | |
Update Date | 2016-06-21 | |
Organism | Mus musculus(house mouse) | |
Product | lebercilin-like protein isoform X2 | |
Comment | Comment: MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NC_000082.6) annotated using gene prediction method: Gnomon, supported by EST evidence. Also see: Documentation of NCBI's Annotation Process On Jun 22, 2016 this sequence version replaced XM_006523062.2. ##Genome-Annotation-Data-START## Annotation Provider :: NCBI Annotation Status :: Full annotation Annotation Version :: Mus musculus Annotation Release 106 Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline Annotation Software Version :: 7.1 Annotation Method :: Best-placed RefSeq; Gnomon Features Annotated :: Gene; mRNA; CDS; ncRNA ##Genome-Annotation-Data-END## |
1 | ATGTCTTTGG CTGATACAAC AGAAGCACAC ACAAACGAGC ATTTCCCCAG TCTGGCACTA |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
RefSeq | XP_006523125.1 |
CDS | 59..2251 |
Translation |
Target ORF information:
Target ORF information:
|
![]() |
1 | ATGTCTTTGG CTGATACAAC AGAAGCACAC ACAAACGAGC ATTTCCCCAG TCTGGCACTA |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
CloneID | OMu52776 | |
Clone ID Related Accession (Same CDS sequence) | XM_006523061.3 , XM_006523061.4 | |
Accession Version | XM_006523061.4 Latest version! | Documents for ORF clone product in default vector |
Sequence Information | ORF Nucleotide Sequence (Length: 2205bp) Protein sequence SNP |
|
Vector | pcDNA3.1-C-(k)DYK or customized vector | ![]() |
Clone information | Clone Map | ![]() |
Tag on pcDNA3.1+/C-(K)DYK | C terminal DYKDDDDK tags | |
ORF Insert Method | CloneEZ™ Seamless cloning technology | |
Insert Structure | linear | |
Update Date | 2019-08-07 | |
Organism | Mus musculus(house mouse) | |
Product | lebercilin-like protein isoform X1 | |
Comment | Comment: MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NC_000082.6) annotated using gene prediction method: Gnomon, supported by mRNA and EST evidence. Also see: Documentation of NCBI's Annotation Process On Aug 8, 2019 this sequence version replaced XM_006523061.3. ##Genome-Annotation-Data-START## Annotation Provider :: NCBI Annotation Status :: Full annotation Annotation Name :: Mus musculus Annotation Release 108 Annotation Version :: 108 Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline Annotation Software Version :: 8.2 Annotation Method :: Best-placed RefSeq; Gnomon Features Annotated :: Gene; mRNA; CDS; ncRNA ##Genome-Annotation-Data-END## |
1 | ATGAGGTTGT GGACTATGTC TTTGGCTGAT ACAACAGAAG CACACACAAA CGAGCATTTC |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
RefSeq | XP_006523124.1 |
CDS | 301..2505 |
Translation |
Target ORF information:
Target ORF information:
|
![]() |
1 | ATGAGGTTGT GGACTATGTC TTTGGCTGAT ACAACAGAAG CACACACAAA CGAGCATTTC |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
CloneID | OMu52777 | |
Clone ID Related Accession (Same CDS sequence) | XM_006523062.3 , XM_006523062.4 | |
Accession Version | XM_006523062.4 Latest version! | Documents for ORF clone product in default vector |
Sequence Information | ORF Nucleotide Sequence (Length: 2193bp) Protein sequence SNP |
|
Vector | pcDNA3.1-C-(k)DYK or customized vector | ![]() |
Clone information | Clone Map | ![]() |
Tag on pcDNA3.1+/C-(K)DYK | C terminal DYKDDDDK tags | |
ORF Insert Method | CloneEZ™ Seamless cloning technology | |
Insert Structure | linear | |
Update Date | 2019-08-07 | |
Organism | Mus musculus(house mouse) | |
Product | lebercilin-like protein isoform X2 | |
Comment | Comment: MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NC_000082.6) annotated using gene prediction method: Gnomon, supported by EST evidence. Also see: Documentation of NCBI's Annotation Process On Aug 8, 2019 this sequence version replaced XM_006523062.3. ##Genome-Annotation-Data-START## Annotation Provider :: NCBI Annotation Status :: Full annotation Annotation Name :: Mus musculus Annotation Release 108 Annotation Version :: 108 Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline Annotation Software Version :: 8.2 Annotation Method :: Best-placed RefSeq; Gnomon Features Annotated :: Gene; mRNA; CDS; ncRNA ##Genome-Annotation-Data-END## |
1 | ATGTCTTTGG CTGATACAAC AGAAGCACAC ACAAACGAGC ATTTCCCCAG TCTGGCACTA |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
RefSeq | XP_006523125.1 |
CDS | 59..2251 |
Translation |
Target ORF information:
Target ORF information:
|
![]() |
1 | ATGTCTTTGG CTGATACAAC AGAAGCACAC ACAAACGAGC ATTTCCCCAG TCTGGCACTA |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
Phylogenetic-based propagation of functional annotations within the Gene Ontology consortium. |