Gene Symbol | Pus1 |
Entrez Gene ID | 56361 |
Full Name | pseudouridine synthase 1 |
Synonyms | A730013B20Rik,MPUS1,mPus1p |
General protein information |
|
Gene Type | protein-coding |
Organism | Mus musculus(house mouse) |
Genome |
ORF » Species Summary » Mus musculus » Pus1 cDNA ORF clone
Gene Symbol | Pus1 |
Entrez Gene ID | 56361 |
Full Name | pseudouridine synthase 1 |
Synonyms | A730013B20Rik,MPUS1,mPus1p |
General protein information |
|
Gene Type | protein-coding |
Organism | Mus musculus(house mouse) |
Genome |
mRNA | Protein | Name |
---|---|---|
NM_001025562.2 | NP_001020733.1 | tRNA pseudouridine synthase A isoform 3 |
NM_019700.4 | NP_062674.2 | tRNA pseudouridine synthase A isoform 2 |
NM_001359219.1 | NP_001346148.1 | tRNA pseudouridine synthase A isoform 3 |
XM_011249545.1 | XP_011247847.1 | tRNA pseudouridine synthase A, mitochondrial isoform X1 |
XM_017321014.1 | XP_017176503.1 | tRNA pseudouridine synthase A, mitochondrial isoform X1 |
XM_017321015.2 | XP_017176504.1 | tRNA pseudouridine synthase A isoform X1 |
XM_006535148.2 | XP_006535211.1 | tRNA pseudouridine synthase A isoform X2 |
NM_001359218.1 | NP_001346147.1 | tRNA pseudouridine synthase A isoform 5 |
NM_001347390.1 | NP_001334319.1 | tRNA pseudouridine synthase A isoform 4 |
NM_001025561.3 | NP_001020732.1 | tRNA pseudouridine synthase A isoform 1 |
XM_011249545.2 | XP_011247847.1 | tRNA pseudouridine synthase A, mitochondrial isoform X1 |
XM_006535148.1 | XP_006535211.1 | tRNA pseudouridine synthase A, mitochondrial isoform X2 |
XM_017321015.1 | XP_017176504.1 | tRNA pseudouridine synthase A, mitochondrial isoform X1 |
XM_017321014.2 | XP_017176503.1 | tRNA pseudouridine synthase A isoform X1 |
Mus musculus (house mouse) | Pus1 | NP_001020732.1 |
Neurospora crassa | NCU07528 | XP_959041.1 |
Xenopus tropicalis (tropical clawed frog) | pus1 | XP_002931922.1 |
Homo sapiens (human) | PUS1 | NP_079491.2 |
Caenorhabditis elegans (roundworm) | pus-1 | NP_507242.1 |
Schizosaccharomyces pombe (fission yeast) | pus1 | NP_588446.1 |
Pan troglodytes (chimpanzee) | PUS1 | XP_001139560.1 |
Bos taurus (cattle) | PUS1 | XP_002694500.1 |
Rattus norvegicus (Norway rat) | Pus1 | NP_001020734.1 |
Canis lupus familiaris (dog) | PUS1 | XP_005636135.1 |
Gallus gallus (chicken) | PUS1 | XP_415090.1 |
Saccharomyces cerevisiae (baker's yeast) | PUS1 | NP_015112.1 |
Kluyveromyces lactis | KLLA0B02244g | XP_451631.1 |
Eremothecium gossypii | AGOS_AFL105C | NP_985445.2 |
Oryza sativa (rice) | Os02g0668400 | NP_001047686.1 |
LOC719360 | XP_001113470.1 | |
Danio rerio (zebrafish) | pus1 | NP_001008603.1 |
Drosophila melanogaster (fruit fly) | CG4159 | NP_001163664.1 |
Anopheles gambiae (African malaria mosquito) | AgaP_AGAP002409 | XP_312543.3 |
Magnaporthe oryzae (rice blast fungus) | MGG_07663 | XP_003711599.1 |
Arabidopsis thaliana (thale cress) | AT1G20370 | NP_564112.1 |
Arabidopsis thaliana (thale cress) | AT1G76120 | NP_565126.1 |
Pseudouridine synthase 1 deficient mice, a model for Mitochondrial Myopathy with Sideroblastic Anemia, exhibit muscle morphology and physiology alterations.
Mangum JE, Hardee JP, Fix DK, Puppa MJ, Elkes J, Altomare D, Bykhovskaya Y, Campagna DR, Schmidt PJ, Sendamarai AK, Lidov HG, Barlow SC, Fischel-Ghodsian N, Fleming MD, Carson JA, Patton JR
Scientific reports626202(2016 May)
Pus3p- and Pus1p-dependent pseudouridylation of steroid receptor RNA activator controls a functional switch that regulates nuclear receptor signaling.
Zhao X, Patton JR, Ghosh SK, Fischel-Ghodsian N, Shen L, Spanjaard RA
Molecular endocrinology (Baltimore, Md.)21(3)686-99(2007 Mar)
Characterization of an exchangeable gene trap using pU-17 carrying a stop codon-beta geo cassette.
Taniwaki T, Haruna K, Nakamura H, Sekimoto T, Oike Y, Imaizumi T, Saito F, Muta M, Soejima Y, Utoh A, Nakagata N, Araki M, Yamamura K, Araki K
Development, growth & differentiation47(3)163-72(2005 Apr)
Regulation of nuclear receptor activity by a pseudouridine synthase through posttranscriptional modification of steroid receptor RNA activator.
Zhao X, Patton JR, Davis SL, Florence B, Ames SJ, Spanjaard RA
Molecular cell15(4)549-58(2004 Aug)
Mouse pseudouridine synthase 1: gene structure and alternative splicing of pre-mRNA.
Chen J, Patton JR
The Biochemical journal352 Pt 2465-73(2000 Dec)
GeneRIFs: Gene References Into Functions What's a GeneRIF?
Pus1p- and Pus3p-dependent pseudouridylation of SRA controls a coactivator-corepressor switch in SRA with major consequences for NR signaling.
Title: Pus3p- and Pus1p-dependent pseudouridylation of steroid receptor RNA activator controls a functional switch that regulates nuclear receptor signaling.
Results identify a pseudouridine synthase, mPus1p, as a coactivator for retinoic acid receptor (mRAR)gamma when coexpressed with steroid receptor RNA activator.
Title: Regulation of nuclear receptor activity by a pseudouridine synthase through posttranscriptional modification of steroid receptor RNA activator.
The following Pus1 gene cDNA ORF clone sequences were retrieved from the NCBI Reference Sequence Database (RefSeq). These sequences represent the protein coding region of the Pus1 cDNA ORF which is encoded by the open reading frame (ORF) sequence. ORF sequences can be delivered in our standard vector, pcDNA3.1+/C-(K)DYK or the vector of your choice as an expression/transfection-ready ORF clone. Not the clone you want? Click here to find your clone.
CloneID | OMu12192 | |
Clone ID Related Accession (Same CDS sequence) | NM_001025561.3 | |
Accession Version | NM_001025561.3 Latest version! | Documents for ORF clone product in default vector |
Sequence Information | ORF Nucleotide Sequence (Length: 1326bp) Protein sequence SNP |
|
Vector | pcDNA3.1-C-(k)DYK or customized vector | User Manual |
Clone information | Clone Map | MSDS |
Tag on pcDNA3.1+/C-(K)DYK | C terminal DYKDDDDK tags | |
ORF Insert Method | CloneEZ™ Seamless cloning technology | |
Insert Structure | linear | |
Update Date | 2019-08-01 | |
Organism | Mus musculus(house mouse) | |
Product | tRNA pseudouridine synthase A isoform 1 | |
Comment | Comment: VALIDATED REFSEQ: This record has undergone validation or preliminary review. The reference sequence was derived from AC161348.2. On Aug 14, 2009 this sequence version replaced NM_001025561.2. Transcript Variant: This variant (1) encodes the longest isoform (1). Sequence Note: The RefSeq transcript and protein were derived from genomic sequence to make the sequence consistent with the reference genome assembly. The genomic coordinates used for the transcript record were based on alignments. ##Evidence-Data-START## Transcript exon combination :: AB041563.1 [ECO:0000332] RNAseq introns :: single sample supports all introns SAMN00849382, SAMN00849383 [ECO:0000348] ##Evidence-Data-END## COMPLETENESS: complete on the 3' end. |
1 | ATGGGCTTCC CCCGCCTGTG GGCCGCACTG CTGAGAAACT GGGGACGGTG GACGGCGCGC |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
RefSeq | NP_001020732.1 |
CDS | 278..1603 |
Translation |
Target ORF information:
Target ORF information:
|
NM_001025561.3 |
1 | ATGGGCTTCC CCCGCCTGTG GGCCGCACTG CTGAGAAACT GGGGACGGTG GACGGCGCGC |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
CloneID | OMu35619 | |
Clone ID Related Accession (Same CDS sequence) | NM_001347390.1 | |
Accession Version | NM_001347390.1 Latest version! | Documents for ORF clone product in default vector |
Sequence Information | ORF Nucleotide Sequence (Length: 1044bp) Protein sequence SNP |
|
Vector | pcDNA3.1-C-(k)DYK or customized vector | User Manual |
Clone information | Clone Map | MSDS |
Tag on pcDNA3.1+/C-(K)DYK | C terminal DYKDDDDK tags | |
ORF Insert Method | CloneEZ™ Seamless cloning technology | |
Insert Structure | linear | |
Update Date | 2019-08-01 | |
Organism | Mus musculus(house mouse) | |
Product | tRNA pseudouridine synthase A isoform 4 | |
Comment | Comment: VALIDATED REFSEQ: This record has undergone validation or preliminary review. The reference sequence was derived from AC161348.2. On Nov 26, 2016 this sequence version replaced XM_006535149.3. Transcript Variant: This variant (4) uses an alternate splice site in the 5' UTR and 5' coding region and lacks two in-frame segments in the coding region, as compared to variant 1. These differences cause translation initiation at a downstream AUG and an encoded protein (isoform 4) that is shorter than isoform 1. Sequence Note: The RefSeq transcript and protein were derived from genomic sequence to make the sequence consistent with the reference genome assembly. The genomic coordinates used for the transcript record were based on alignments. ##Evidence-Data-START## CDS exon combination :: AK138570.1 [ECO:0000331] RNAseq introns :: single sample supports all introns SAMN01164142 [ECO:0000348] ##Evidence-Data-END## COMPLETENESS: complete on the 3' end. |
1 | ATGGCTGGAA ACAAGGTGCC ACCAGCGCTG GCCTCACACC AACCGGACAG GAAGGGCCGA |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
RefSeq | NP_001334319.1 |
CDS | 65..1108 |
Translation |
Target ORF information:
Target ORF information:
|
NM_001347390.1 |
1 | ATGGCTGGAA ACAAGGTGCC ACCAGCGCTG GCCTCACACC AACCGGACAG GAAGGGCCGA |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
CloneID | OMu35618 | |
Clone ID Related Accession (Same CDS sequence) | XM_006535148.2 , XM_006535148.1 | |
Accession Version | XM_006535148.1 | Documents for ORF clone product in default vector |
Sequence Information | ORF Nucleotide Sequence (Length: 1134bp) Protein sequence SNP |
|
Vector | pcDNA3.1-C-(k)DYK or customized vector | User Manual |
Clone information | Clone Map | MSDS |
Tag on pcDNA3.1+/C-(K)DYK | C terminal DYKDDDDK tags | |
ORF Insert Method | CloneEZ™ Seamless cloning technology | |
Insert Structure | linear | |
Update Date | 2016-06-21 | |
Organism | Mus musculus(house mouse) | |
Product | tRNA pseudouridine synthase A, mitochondrial isoform X2 | |
Comment | Comment: MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NC_000071.6) annotated using gene prediction method: Gnomon, supported by mRNA and EST evidence. Also see: Documentation of NCBI's Annotation Process ##Genome-Annotation-Data-START## Annotation Provider :: NCBI Annotation Status :: Full annotation Annotation Version :: Mus musculus Annotation Release 106 Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline Annotation Software Version :: 7.1 Annotation Method :: Best-placed RefSeq; Gnomon Features Annotated :: Gene; mRNA; CDS; ncRNA ##Genome-Annotation-Data-END## |
1 | ATGGGCTTCC CCCGCCTGTG GGCCGCACTG CTGAGAAACT GGGGACGGTG GACGGCGCGC |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
RefSeq | XP_006535211.1 |
CDS | 261..1394 |
Translation |
Target ORF information:
Target ORF information:
|
XM_006535148.1 |
1 | ATGGGCTTCC CCCGCCTGTG GGCCGCACTG CTGAGAAACT GGGGACGGTG GACGGCGCGC |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
CloneID | OMu11374 | |
Clone ID Related Accession (Same CDS sequence) | NM_019700.4 | |
Accession Version | NM_019700.4 Latest version! | Documents for ORF clone product in default vector |
Sequence Information | ORF Nucleotide Sequence (Length: 1272bp) Protein sequence SNP |
|
Vector | pcDNA3.1-C-(k)DYK or customized vector | User Manual |
Clone information | Clone Map | MSDS |
Tag on pcDNA3.1+/C-(K)DYK | C terminal DYKDDDDK tags | |
ORF Insert Method | CloneEZ™ Seamless cloning technology | |
Insert Structure | linear | |
Update Date | 2019-08-02 | |
Organism | Mus musculus(house mouse) | |
Product | tRNA pseudouridine synthase A isoform 2 | |
Comment | Comment: VALIDATED REFSEQ: This record has undergone validation or preliminary review. The reference sequence was derived from BY331510.1, BU515425.1, CB059120.1 and CF618003.1. On Apr 13, 2006 this sequence version replaced NM_019700.3. Transcript Variant: This variant (2) lacks an in-frame exon in the coding region, as compared to variant 1. The encoded isoform 2 thus lacks an internal segment, as compared to isoform 1. ##Evidence-Data-START## Transcript exon combination :: BC034359.1, AK089258.1 [ECO:0000332] RNAseq introns :: single sample supports all introns SAMN00849382, SAMN00849383 [ECO:0000348] ##Evidence-Data-END## COMPLETENESS: complete on the 3' end. |
1 | ATGGGCTTCC CCCGCCTGTG GGCCGCACTG CTGAGAAACT GGGGACGGTG GACGGCGCGC |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
RefSeq | NP_062674.2 |
CDS | 278..1549 |
Translation |
Target ORF information:
Target ORF information:
|
NM_019700.4 |
1 | ATGGGCTTCC CCCGCCTGTG GGCCGCACTG CTGAGAAACT GGGGACGGTG GACGGCGCGC |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
CloneID | OMu12194 | |
Clone ID Related Accession (Same CDS sequence) | NM_001025562.2 , NM_001359219.1 , XM_011249545.1 , XM_017321014.1 , XM_017321015.2 , XM_011249545.2 , XM_017321015.1 , XM_017321014.2 | |
Accession Version | NM_001025562.2 Latest version! | Documents for ORF clone product in default vector |
Sequence Information | ORF Nucleotide Sequence (Length: 1182bp) Protein sequence SNP |
|
Vector | pcDNA3.1-C-(k)DYK or customized vector | User Manual |
Clone information | Clone Map | MSDS |
Tag on pcDNA3.1+/C-(K)DYK | C terminal DYKDDDDK tags | |
ORF Insert Method | CloneEZ™ Seamless cloning technology | |
Insert Structure | linear | |
Update Date | 2019-08-02 | |
Organism | Mus musculus(house mouse) | |
Product | tRNA pseudouridine synthase A isoform 3 | |
Comment | Comment: VALIDATED REFSEQ: This record has undergone validation or preliminary review. The reference sequence was derived from BY174054.1, AF116237.1 and CF618003.1. On Apr 13, 2006 this sequence version replaced NM_001025562.1. Transcript Variant: This variant (3) uses an alternate splice site in the 5' UTR and 5' coding region and lacks an in-frame segment in the coding region, as compared to variant 1. These differences cause translation initiation at a downstream AUG and an encoded protein (isoform 3) that is shorter than isoform 1. Variants 3 and 6 both encode the same isoform (3). ##Evidence-Data-START## CDS exon combination :: AK161521.1, AF116237.1 [ECO:0000331] RNAseq introns :: mixed/partial sample support SAMN00849374, SAMN00849375 [ECO:0000350] ##Evidence-Data-END## COMPLETENESS: complete on the 3' end. |
1 | ATGGCTGGAA ACAAGGTGCC ACCAGCGCTG GCCTCACACC AACCGGACAG GAAGGGCCGA |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
RefSeq | NP_001020733.1 |
CDS | 65..1246 |
Translation |
Target ORF information:
Target ORF information:
|
NM_001025562.2 |
1 | ATGGCTGGAA ACAAGGTGCC ACCAGCGCTG GCCTCACACC AACCGGACAG GAAGGGCCGA |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
CloneID | OMu12194 | |
Clone ID Related Accession (Same CDS sequence) | NM_001025562.2 , NM_001359219.1 , XM_011249545.1 , XM_017321014.1 , XM_017321015.2 , XM_011249545.2 , XM_017321015.1 , XM_017321014.2 | |
Accession Version | NM_001359219.1 Latest version! | Documents for ORF clone product in default vector |
Sequence Information | ORF Nucleotide Sequence (Length: 1182bp) Protein sequence SNP |
|
Vector | pcDNA3.1-C-(k)DYK or customized vector | User Manual |
Clone information | Clone Map | MSDS |
Tag on pcDNA3.1+/C-(K)DYK | C terminal DYKDDDDK tags | |
ORF Insert Method | CloneEZ™ Seamless cloning technology | |
Insert Structure | linear | |
Update Date | 2019-10-21 | |
Organism | Mus musculus(house mouse) | |
Product | tRNA pseudouridine synthase A isoform 3 | |
Comment | Comment: VALIDATED REFSEQ: This record has undergone validation or preliminary review. The reference sequence was derived from AK161521.1 and AC161348.2. On Dec 29, 2017 this sequence version replaced XM_011249545.2. Transcript Variant: This variant (6) differs in the 5' UTR and coding sequence and lacks an alternate in-frame exon compared to variant 1. The resulting isoform (3) is shorter at the N-terminus and lacks an alternate internal segment compared to variant 1. Variants 3 and 6 both encode the same isoform (3). ##Evidence-Data-START## Transcript exon combination :: AK161521.1 [ECO:0000332] RNAseq introns :: single sample supports all introns SAMN00849382, SAMN00849383 [ECO:0000348] ##Evidence-Data-END## COMPLETENESS: complete on the 3' end. |
1 | ATGGCTGGAA ACAAGGTGCC ACCAGCGCTG GCCTCACACC AACCGGACAG GAAGGGCCGA |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
RefSeq | NP_001346148.1 |
CDS | 73..1254 |
Translation |
Target ORF information:
Target ORF information:
|
NM_001359219.1 |
1 | ATGGCTGGAA ACAAGGTGCC ACCAGCGCTG GCCTCACACC AACCGGACAG GAAGGGCCGA |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
CloneID | OMu35617 | |
Clone ID Related Accession (Same CDS sequence) | NM_001359218.1 | |
Accession Version | NM_001359218.1 Latest version! | Documents for ORF clone product in default vector |
Sequence Information | ORF Nucleotide Sequence (Length: 1236bp) Protein sequence SNP |
|
Vector | pcDNA3.1-C-(k)DYK or customized vector | User Manual |
Clone information | Clone Map | MSDS |
Tag on pcDNA3.1+/C-(K)DYK | C terminal DYKDDDDK tags | |
ORF Insert Method | CloneEZ™ Seamless cloning technology | |
Insert Structure | linear | |
Update Date | 2019-08-02 | |
Organism | Mus musculus(house mouse) | |
Product | tRNA pseudouridine synthase A isoform 5 | |
Comment | Comment: VALIDATED REFSEQ: This record has undergone validation or preliminary review. The reference sequence was derived from AC161348.2. Transcript Variant: This variant (5) differs in the 5' UTR and coding sequence compared to variant 1. The resulting isoform (5) is shorter at the N-terminus compared to isoform 1. Sequence Note: The RefSeq transcript and protein were derived from genomic sequence to make the sequence consistent with the reference genome assembly. The genomic coordinates used for the transcript record were based on alignments. ##Evidence-Data-START## CDS exon combination :: SRR1660811.167760.1 [ECO:0000331] RNAseq introns :: mixed/partial sample support SAMN00849374, SAMN00849375 [ECO:0000350] ##Evidence-Data-END## COMPLETENESS: complete on the 3' end. |
1 | ATGGCTGGAA ACAAGGTGCC ACCAGCGCTG GCCTCACACC AACCGGACAG GAAGGGCCGA |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
RefSeq | NP_001346147.1 |
CDS | 65..1300 |
Translation |
Target ORF information:
Target ORF information:
|
NM_001359218.1 |
1 | ATGGCTGGAA ACAAGGTGCC ACCAGCGCTG GCCTCACACC AACCGGACAG GAAGGGCCGA |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
CloneID | OMu12194 | |
Clone ID Related Accession (Same CDS sequence) | NM_001025562.2 , NM_001359219.1 , XM_011249545.1 , XM_017321014.1 , XM_017321015.2 , XM_011249545.2 , XM_017321015.1 , XM_017321014.2 | |
Accession Version | XM_011249545.1 | Documents for ORF clone product in default vector |
Sequence Information | ORF Nucleotide Sequence (Length: 1182bp) Protein sequence SNP |
|
Vector | pcDNA3.1-C-(k)DYK or customized vector | User Manual |
Clone information | Clone Map | MSDS |
Tag on pcDNA3.1+/C-(K)DYK | C terminal DYKDDDDK tags | |
ORF Insert Method | CloneEZ™ Seamless cloning technology | |
Insert Structure | linear | |
Update Date | 2015-02-08 | |
Organism | Mus musculus(House mouse) | |
Product | tRNA pseudouridine synthase A, mitochondrial isoform X1 | |
Comment |
1 | ATGGCTGGAA ACAAGGTGCC ACCAGCGCTG GCCTCACACC AACCGGACAG GAAGGGCCGA |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
RefSeq | XP_011247847.1 |
Translation |
Target ORF information:
Target ORF information:
|
XM_011249545.1 |
1 | ATGGCTGGAA ACAAGGTGCC ACCAGCGCTG GCCTCACACC AACCGGACAG GAAGGGCCGA |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
CloneID | OMu12194 | |
Clone ID Related Accession (Same CDS sequence) | NM_001025562.2 , NM_001359219.1 , XM_011249545.1 , XM_017321014.1 , XM_017321015.2 , XM_011249545.2 , XM_017321015.1 , XM_017321014.2 | |
Accession Version | XM_017321014.1 | Documents for ORF clone product in default vector |
Sequence Information | ORF Nucleotide Sequence (Length: 1182bp) Protein sequence SNP |
|
Vector | pcDNA3.1-C-(k)DYK or customized vector | User Manual |
Clone information | Clone Map | MSDS |
Tag on pcDNA3.1+/C-(K)DYK | C terminal DYKDDDDK tags | |
ORF Insert Method | CloneEZ™ Seamless cloning technology | |
Insert Structure | linear | |
Update Date | 2016-06-21 | |
Organism | Mus musculus(house mouse) | |
Product | tRNA pseudouridine synthase A, mitochondrial isoform X1 | |
Comment | Comment: MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NC_000071.6) annotated using gene prediction method: Gnomon, supported by mRNA and EST evidence. Also see: Documentation of NCBI's Annotation Process ##Genome-Annotation-Data-START## Annotation Provider :: NCBI Annotation Status :: Full annotation Annotation Version :: Mus musculus Annotation Release 106 Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline Annotation Software Version :: 7.1 Annotation Method :: Best-placed RefSeq; Gnomon Features Annotated :: Gene; mRNA; CDS; ncRNA ##Genome-Annotation-Data-END## |
1 | ATGGCTGGAA ACAAGGTGCC ACCAGCGCTG GCCTCACACC AACCGGACAG GAAGGGCCGA |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
RefSeq | XP_017176503.1 |
CDS | 104..1285 |
Translation |
Target ORF information:
Target ORF information:
|
XM_017321014.1 |
1 | ATGGCTGGAA ACAAGGTGCC ACCAGCGCTG GCCTCACACC AACCGGACAG GAAGGGCCGA |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
CloneID | OMu12194 | |
Clone ID Related Accession (Same CDS sequence) | NM_001025562.2 , NM_001359219.1 , XM_011249545.1 , XM_017321014.1 , XM_017321015.2 , XM_011249545.2 , XM_017321015.1 , XM_017321014.2 | |
Accession Version | XM_017321015.2 Latest version! | Documents for ORF clone product in default vector |
Sequence Information | ORF Nucleotide Sequence (Length: 1182bp) Protein sequence SNP |
|
Vector | pcDNA3.1-C-(k)DYK or customized vector | User Manual |
Clone information | Clone Map | MSDS |
Tag on pcDNA3.1+/C-(K)DYK | C terminal DYKDDDDK tags | |
ORF Insert Method | CloneEZ™ Seamless cloning technology | |
Insert Structure | linear | |
Update Date | 2019-08-07 | |
Organism | Mus musculus(house mouse) | |
Product | tRNA pseudouridine synthase A isoform X1 | |
Comment | Comment: MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NC_000071.6) annotated using gene prediction method: Gnomon, supported by mRNA and EST evidence. Also see: Documentation of NCBI's Annotation Process On Aug 8, 2019 this sequence version replaced XM_017321015.1. ##Genome-Annotation-Data-START## Annotation Provider :: NCBI Annotation Status :: Full annotation Annotation Name :: Mus musculus Annotation Release 108 Annotation Version :: 108 Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline Annotation Software Version :: 8.2 Annotation Method :: Best-placed RefSeq; Gnomon Features Annotated :: Gene; mRNA; CDS; ncRNA ##Genome-Annotation-Data-END## |
1 | ATGGCTGGAA ACAAGGTGCC ACCAGCGCTG GCCTCACACC AACCGGACAG GAAGGGCCGA |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
RefSeq | XP_017176504.1 |
CDS | 73..1254 |
Translation |
Target ORF information:
Target ORF information:
|
XM_017321015.2 |
1 | ATGGCTGGAA ACAAGGTGCC ACCAGCGCTG GCCTCACACC AACCGGACAG GAAGGGCCGA |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
CloneID | OMu12194 | |
Clone ID Related Accession (Same CDS sequence) | NM_001025562.2 , NM_001359219.1 , XM_011249545.1 , XM_017321014.1 , XM_017321015.2 , XM_011249545.2 , XM_017321015.1 , XM_017321014.2 | |
Accession Version | XM_011249545.2 Latest version! | Documents for ORF clone product in default vector |
Sequence Information | ORF Nucleotide Sequence (Length: 1182bp) Protein sequence SNP |
|
Vector | pcDNA3.1-C-(k)DYK or customized vector | User Manual |
Clone information | Clone Map | MSDS |
Tag on pcDNA3.1+/C-(K)DYK | C terminal DYKDDDDK tags | |
ORF Insert Method | CloneEZ™ Seamless cloning technology | |
Insert Structure | linear | |
Update Date | 2016-06-21 | |
Organism | Mus musculus(House mouse) | |
Product | tRNA pseudouridine synthase A, mitochondrial isoform X1 | |
Comment | MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NC_000071.6) annotated using gene prediction method: Gnomon, supported by mRNA and EST evidence. Also see: Documentation of NCBI's Annotation Process On Jun 22, 2016 this sequence version replaced XM_011249545.1. ##Genome-Annotation-Data-START## Annotation Provider :: NCBI Annotation Status :: Full annotation Annotation Version :: Mus musculus Annotation Release 106 Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline Annotation Software Version :: 7.1 Annotation Method :: Best-placed RefSeq; Gnomon Features Annotated :: Gene; mRNA; CDS; ncRNA ##Genome-Annotation-Data-END## |
1 | ATGGCTGGAA ACAAGGTGCC ACCAGCGCTG GCCTCACACC AACCGGACAG GAAGGGCCGA |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
RefSeq | XP_011247847.1 |
CDS | 106..1287 |
Translation |
Target ORF information:
Target ORF information:
|
XM_011249545.2 |
1 | ATGGCTGGAA ACAAGGTGCC ACCAGCGCTG GCCTCACACC AACCGGACAG GAAGGGCCGA |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
CloneID | OMu12194 | |
Clone ID Related Accession (Same CDS sequence) | NM_001025562.2 , NM_001359219.1 , XM_011249545.1 , XM_017321014.1 , XM_017321015.2 , XM_011249545.2 , XM_017321015.1 , XM_017321014.2 | |
Accession Version | XM_017321015.1 | Documents for ORF clone product in default vector |
Sequence Information | ORF Nucleotide Sequence (Length: 1182bp) Protein sequence SNP |
|
Vector | pcDNA3.1-C-(k)DYK or customized vector | User Manual |
Clone information | Clone Map | MSDS |
Tag on pcDNA3.1+/C-(K)DYK | C terminal DYKDDDDK tags | |
ORF Insert Method | CloneEZ™ Seamless cloning technology | |
Insert Structure | linear | |
Update Date | 2016-06-21 | |
Organism | Mus musculus(house mouse) | |
Product | tRNA pseudouridine synthase A, mitochondrial isoform X1 | |
Comment | Comment: MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NC_000071.6) annotated using gene prediction method: Gnomon, supported by mRNA and EST evidence. Also see: Documentation of NCBI's Annotation Process ##Genome-Annotation-Data-START## Annotation Provider :: NCBI Annotation Status :: Full annotation Annotation Version :: Mus musculus Annotation Release 106 Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline Annotation Software Version :: 7.1 Annotation Method :: Best-placed RefSeq; Gnomon Features Annotated :: Gene; mRNA; CDS; ncRNA ##Genome-Annotation-Data-END## |
1 | ATGGCTGGAA ACAAGGTGCC ACCAGCGCTG GCCTCACACC AACCGGACAG GAAGGGCCGA |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
RefSeq | XP_017176504.1 |
CDS | 79..1260 |
Translation |
Target ORF information:
Target ORF information:
|
XM_017321015.1 |
1 | ATGGCTGGAA ACAAGGTGCC ACCAGCGCTG GCCTCACACC AACCGGACAG GAAGGGCCGA |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
CloneID | OMu12194 | |
Clone ID Related Accession (Same CDS sequence) | NM_001025562.2 , NM_001359219.1 , XM_011249545.1 , XM_017321014.1 , XM_017321015.2 , XM_011249545.2 , XM_017321015.1 , XM_017321014.2 | |
Accession Version | XM_017321014.2 Latest version! | Documents for ORF clone product in default vector |
Sequence Information | ORF Nucleotide Sequence (Length: 1182bp) Protein sequence SNP |
|
Vector | pcDNA3.1-C-(k)DYK or customized vector | User Manual |
Clone information | Clone Map | MSDS |
Tag on pcDNA3.1+/C-(K)DYK | C terminal DYKDDDDK tags | |
ORF Insert Method | CloneEZ™ Seamless cloning technology | |
Insert Structure | linear | |
Update Date | 2019-08-07 | |
Organism | Mus musculus(house mouse) | |
Product | tRNA pseudouridine synthase A isoform X1 | |
Comment | Comment: MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NC_000071.6) annotated using gene prediction method: Gnomon, supported by mRNA and EST evidence. Also see: Documentation of NCBI's Annotation Process On Aug 8, 2019 this sequence version replaced XM_017321014.1. ##Genome-Annotation-Data-START## Annotation Provider :: NCBI Annotation Status :: Full annotation Annotation Name :: Mus musculus Annotation Release 108 Annotation Version :: 108 Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline Annotation Software Version :: 8.2 Annotation Method :: Best-placed RefSeq; Gnomon Features Annotated :: Gene; mRNA; CDS; ncRNA ##Genome-Annotation-Data-END## |
1 | ATGGCTGGAA ACAAGGTGCC ACCAGCGCTG GCCTCACACC AACCGGACAG GAAGGGCCGA |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
RefSeq | XP_017176503.1 |
CDS | 88..1269 |
Translation |
Target ORF information:
Target ORF information:
|
XM_017321014.2 |
1 | ATGGCTGGAA ACAAGGTGCC ACCAGCGCTG GCCTCACACC AACCGGACAG GAAGGGCCGA |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
CloneID | OMu35618 | |
Clone ID Related Accession (Same CDS sequence) | XM_006535148.2 , XM_006535148.1 | |
Accession Version | XM_006535148.2 Latest version! | Documents for ORF clone product in default vector |
Sequence Information | ORF Nucleotide Sequence (Length: 1134bp) Protein sequence SNP |
|
Vector | pcDNA3.1-C-(k)DYK or customized vector | User Manual |
Clone information | Clone Map | MSDS |
Tag on pcDNA3.1+/C-(K)DYK | C terminal DYKDDDDK tags | |
ORF Insert Method | CloneEZ™ Seamless cloning technology | |
Insert Structure | linear | |
Update Date | 2019-08-07 | |
Organism | Mus musculus(house mouse) | |
Product | tRNA pseudouridine synthase A isoform X2 | |
Comment | Comment: MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NC_000071.6) annotated using gene prediction method: Gnomon, supported by mRNA and EST evidence. Also see: Documentation of NCBI's Annotation Process On Aug 8, 2019 this sequence version replaced XM_006535148.1. ##Genome-Annotation-Data-START## Annotation Provider :: NCBI Annotation Status :: Full annotation Annotation Name :: Mus musculus Annotation Release 108 Annotation Version :: 108 Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline Annotation Software Version :: 8.2 Annotation Method :: Best-placed RefSeq; Gnomon Features Annotated :: Gene; mRNA; CDS; ncRNA ##Genome-Annotation-Data-END## |
1 | ATGGGCTTCC CCCGCCTGTG GGCCGCACTG CTGAGAAACT GGGGACGGTG GACGGCGCGC |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
RefSeq | XP_006535211.1 |
CDS | 290..1423 |
Translation |
Target ORF information:
Target ORF information:
|
XM_006535148.2 |
1 | ATGGGCTTCC CCCGCCTGTG GGCCGCACTG CTGAGAAACT GGGGACGGTG GACGGCGCGC |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
Pseudouridine synthase 1 deficient mice, a model for Mitochondrial Myopathy with Sideroblastic Anemia, exhibit muscle morphology and physiology alterations. |
Pus3p- and Pus1p-dependent pseudouridylation of steroid receptor RNA activator controls a functional switch that regulates nuclear receptor signaling. |
Characterization of an exchangeable gene trap using pU-17 carrying a stop codon-beta geo cassette. |
Regulation of nuclear receptor activity by a pseudouridine synthase through posttranscriptional modification of steroid receptor RNA activator. |
Mouse pseudouridine synthase 1: gene structure and alternative splicing of pre-mRNA. |