Gene Symbol
Pard6a
Entrez Gene ID
56513
Full Name
par-6 family cell polarity regulator alpha
Synonyms
0710008C04Rik,2610010A15Rik,PAR-6A,PAR6alpha,Par-6,Par6,Par6c,TAX40,Tip-40
General protein information
Preferred Namespar-6 family cell polarity regulator alpha
Namespartitioning defective 6 homolog alpha PAR-6 alpha Tax interaction protein 40 par-6 (partitioning defective 6,) homolog alpha
Gene Type
protein-coding
Organism
Mus musculus(house mouse)
Genome
Chromosome: 8
Map Location: 8|8 D3
mRNA and Protein(s)
mRNA
Protein
Name
NM_001047436.2
NP_001040901.1
partitioning defective 6 homolog alpha isoform 3
NM_019695.3
NP_062669.2
partitioning defective 6 homolog alpha isoform 1
NM_001047435.2
NP_001040900.1
partitioning defective 6 homolog alpha isoform 2
NM_001286345.1
NP_001273274.1
partitioning defective 6 homolog alpha isoform 5
NM_001286344.1
NP_001273273.1
partitioning defective 6 homolog alpha isoform 4
Canis lupus familiaris (dog)
PARD6A
XP_546876.5
Mus musculus (house mouse)
Pard6a
NP_062669.2
Gallus gallus (chicken)
PARD6A
XP_004944104.1
Danio rerio (zebrafish)
pard6a
NP_001093521.2
PARD6A
XP_001092684.1
Bos taurus (cattle)
PARD6A
NP_001039739.1
Homo sapiens (human)
PARD6A
NP_058644.1
Pan troglodytes (chimpanzee)
PARD6A
XP_511037.2
Rattus norvegicus (Norway rat)
Pard6a
NP_001003653.1
Related articles in PubMed
FRMD4A-cytohesin signaling modulates the cellular release of tau.
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Zeb1 controls neuron differentiation and germinal zone exit by a mesenchymal-epithelial-like transition.
Singh S, Howell D, Trivedi N, Kessler K, Ong T, Rosmaninho P, Raposo AA, Robinson G, Roussel MF, Castro DS, Solecki DJ eLife5(2016 05)
Antagonistic functions of Dishevelleds regulate Frizzled3 endocytosis via filopodia tips in Wnt-mediated growth cone guidance.
Onishi K, Shafer B, Lo C, Tissir F, Goffinet AM, Zou Y The Journal of neuroscience : the official journal of the Society for Neuroscience33(49)19071-85(2013 Dec)
Loss of aPKC? in differentiated neurons disrupts the polarity complex but does not induce obvious neuronal loss or disorientation in mouse brains.
Yamanaka T, Tosaki A, Kurosawa M, Akimoto K, Hirose T, Ohno S, Hattori N, Nukina N PloS one8(12)e84036(2013)
GeneRIFs: Gene References Into Functions What's a GeneRIF?
The following Pard6a gene cDNA ORF clone sequences were retrieved from the NCBI Reference Sequence Database (RefSeq). These sequences represent the protein coding region of the Pard6a cDNA ORF which is encoded by the open reading frame (ORF) sequence. ORF sequences can be delivered in our standard vector, pcDNA3.1+ /C-(K)DYK or the vector of your choice as an expression/transfection-ready ORF clone. Not the clone you want? Click here to find your clone.
CloneID
OMu19901
Clone ID Related Accession (Same CDS sequence)
NM_001286344.1
Accession Version
NM_001286344.1 Latest version!
Documents for ORF clone product in default vector
Sequence Information
ORF Nucleotide Sequence (Length: 513bp)
Protein sequence
SNP
Vector
pcDNA3.1+ /C-(K)DYK or customized vector
User Manual
Clone information
Clone Map
MSDS
Tag on pcDNA3.1+ /C-(K)DYK
C terminal DYKDDDDK tags
ORF Insert Method
CloneEZ™ Seamless cloning technology
Insert Structure
linear
Update Date
2019-09-30
Organism
Mus musculus(house mouse)
Product
partitioning defective 6 homolog alpha isoform 4
Comment
Comment: VALIDATED REFSEQ: This record has undergone validation or preliminary review. The reference sequence was derived from BY099545.1, CK618363.1, AK158848.1 and BF466814.1.
Transcript Variant: This variant (4) differs in the 5' UTR, lacks a portion of the 5' coding region, and initiates translation at a downstream start codon. This encodes a shorter protein (isoform 4), compared to isoform 1.
Publication Note: This RefSeq record includes a subset of the publications that are available for this gene. Please see the Gene record to access additional publications.
##Evidence-Data-START##
Transcript exon combination :: BY099545.1, BI409102.1 [ECO:0000332]
RNAseq introns :: single sample supports all introns SAMN00849374, SAMN00849375 [ECO:0000348]
##Evidence-Data-END##
COMPLETENESS: complete on the 3' end.
1 61 121 181 241 301 361 421 481 ATGAGTGTTC GCGTGGCTCC CCAGGGCCTG GAGCGGGTTC CAGGTATCTT CATCTCCCGC CTGGTACGTG GGGGCCTGGC TGAGAGTACA GGGCTGCTGG CGGTCAGTGA TGAGATCCTT GAGGTCAACG GCATTGAGGT GGCCGGGAAG ACCTTGGACC AAGTGACGGA CATGATGGTC GCCAACAGCC ACAACCTCAT CGTCACTGTC AAGCCTGCCA ACCAGCGTAA TAATGTGGTA CGGGGGGCAT CTGGGCGTCT GACAGGGCCT TCCTCTGTAG GGCCTGGGCC TACTGATCCT GACAGTGACG ATGACAGCAG TGACCTGGTC ATTGAGAATC GCCACCCTCC CTGTTCTAAT GGGCTGTCTC AGGGGCCCCT GTGCTGGGAC CTGCAACCTG GCTGCCTACT TCCTGGTGCT GGCAGCTCTC TGCCCTCCTT GGATAGCAGA GAGCAAGCCA ATTCTGGCTG GGGGAATGGC ATGCGAGGTG ATGTTAGCGG ATTCAGCCTC TGA
The stop codons will be deleted if pcDNA3.1+ /C-(K)DYK vector is selected.
RefSeq
NP_001273273.1
CDS 605..1117
Translation
Target ORF information:
RefSeq Version NM_001286344.1
Organism Mus musculus(house mouse)
Definition Mus musculus par-6 family cell polarity regulator alpha (Pard6a), transcript variant 4, mRNA.
Target ORF information:
Epitope DYKDDDDK
Bacterial selection AMPR
Mammalian selection NeoR
Vector pcDNA3.1+ /C-(K)DYK
NM_001286344.1
ORF Insert Sequence:
1 61 121 181 241 301 361 421 481 ATGAGTGTTC GCGTGGCTCC CCAGGGCCTG GAGCGGGTTC CAGGTATCTT CATCTCCCGC CTGGTACGTG GGGGCCTGGC TGAGAGTACA GGGCTGCTGG CGGTCAGTGA TGAGATCCTT GAGGTCAACG GCATTGAGGT GGCCGGGAAG ACCTTGGACC AAGTGACGGA CATGATGGTC GCCAACAGCC ACAACCTCAT CGTCACTGTC AAGCCTGCCA ACCAGCGTAA TAATGTGGTA CGGGGGGCAT CTGGGCGTCT GACAGGGCCT TCCTCTGTAG GGCCTGGGCC TACTGATCCT GACAGTGACG ATGACAGCAG TGACCTGGTC ATTGAGAATC GCCACCCTCC CTGTTCTAAT GGGCTGTCTC AGGGGCCCCT GTGCTGGGAC CTGCAACCTG GCTGCCTACT TCCTGGTGCT GGCAGCTCTC TGCCCTCCTT GGATAGCAGA GAGCAAGCCA ATTCTGGCTG GGGGAATGGC ATGCGAGGTG ATGTTAGCGG ATTCAGCCTC TGA
The stop codons will be deleted if pcDNA3.1+ /C-(K)DYK vector is selected.
CloneID
OMu19753
Clone ID Related Accession (Same CDS sequence)
NM_019695.3
Accession Version
NM_019695.3 Latest version!
Documents for ORF clone product in default vector
Sequence Information
ORF Nucleotide Sequence (Length: 1041bp)
Protein sequence
SNP
Vector
pcDNA3.1+ /C-(K)DYK or customized vector
User Manual
Clone information
Clone Map
MSDS
Tag on pcDNA3.1+ /C-(K)DYK
C terminal DYKDDDDK tags
ORF Insert Method
CloneEZ™ Seamless cloning technology
Insert Structure
linear
Update Date
2019-12-27
Organism
Mus musculus(house mouse)
Product
partitioning defective 6 homolog alpha isoform 1
Comment
Comment: VALIDATED REFSEQ: This record has undergone validation or preliminary review. The reference sequence was derived from AC152826.2, AK158848.1, CX206739.1 and BF466814.1. On Nov 2, 2013 this sequence version replaced NM_019695.2.
Transcript Variant: This variant (1) encodes the longest protein (isoform 1).
Publication Note: This RefSeq record includes a subset of the publications that are available for this gene. Please see the Gene record to access additional publications.
##Evidence-Data-START##
Transcript exon combination :: AF070970.1, BG806503.1 [ECO:0000332]
RNAseq introns :: single sample supports all introns SAMN00849374, SAMN00849375 [ECO:0000348]
##Evidence-Data-END##
COMPLETENESS: complete on the 3' end.
1 61 121 181 241 301 361 421 481 541 601 661 721 781 841 901 961 1021 ATGGCCAGGC CGCAGAGGAC TCCGGCGCGC AGTCCCGATA GCATCGTCGA GGTGAAGAGC AAATTTGACG CCGAGTTCCG ACGCTTTGCA CTACCCCGCA CTTCGGTGAG AGGCTTTCAG GAGTTCTCGC GATTGCTGTG TGTGGTACAC CAGATCCCTG GCCTGGACGT CCTGCTTGGC TATACGGATG CTCACGGTGA CTTGCTGCCC CTCACCAACG ATGACAGTTT GCACCGGGCC CTGGCCAGCG GGCCCCCACC TCTGCGCCTC TTGGTTCAGA AACGGGCAGA AGGTGACTCG AGTGGCCTGG CTTTTGCCTC CAACTCTCTA CAAAGGCGCA AGAAAGGGCT CCTGCTACGA CCAGTGGCAC CTCTGCGCAC CAGGCCACCC TTGTTAATCA GCTTGCCCCA AGATTTCCGC CAGGTGTCTT CAGTTATAGA TGTGGACCTA CTACCTGAGA CCCACCGACG AGTGAGGCTG CACAAACATG GTTCAGACCG TCCCCTGGGC TTCTACATTC GAGATGGCAT GAGTGTTCGC GTGGCTCCCC AGGGCCTGGA GCGGGTTCCA GGTATCTTCA TCTCCCGCCT GGTACGTGGG GGCCTGGCTG AGAGTACAGG GCTGCTGGCG GTCAGTGATG AGATCCTTGA GGTCAACGGC ATTGAGGTGG CCGGGAAGAC CTTGGACCAA GTGACGGACA TGATGGTCGC CAACAGCCAC AACCTCATCG TCACTGTCAA GCCTGCCAAC CAGCGTAATA ATGTGGTACG GGGGGCATCT GGGCGTCTGA CAGGGCCTTC CTCTGTAGGG CCTGGGCCTA CTGATCCTGA CAGTGACGAT GACAGCAGTG ACCTGGTCAT TGAGAATCGC CACCCTCCCT GTTCTAATGG GCTGTCTCAG GGGCCCCTGT GCTGGGACCT GCAACCTGGC TGCCTACTTC CTGGTGCTGG CAGCTCTCTG CCCTCCTTGG ATAGCAGAGA GCAAGCCAAT TCTGGCTGGG GGAATGGCAT GCGAGGTGAT GTTAGCGGAT TCAGCCTCTG A
The stop codons will be deleted if pcDNA3.1+ /C-(K)DYK vector is selected.
RefSeq
NP_062669.2
CDS 95..1135
Translation
Target ORF information:
RefSeq Version NM_019695.3
Organism Mus musculus(house mouse)
Definition Mus musculus par-6 family cell polarity regulator alpha (Pard6a), transcript variant 1, mRNA.
Target ORF information:
Epitope DYKDDDDK
Bacterial selection AMPR
Mammalian selection NeoR
Vector pcDNA3.1+ /C-(K)DYK
NM_019695.3
ORF Insert Sequence:
1 61 121 181 241 301 361 421 481 541 601 661 721 781 841 901 961 1021 ATGGCCAGGC CGCAGAGGAC TCCGGCGCGC AGTCCCGATA GCATCGTCGA GGTGAAGAGC AAATTTGACG CCGAGTTCCG ACGCTTTGCA CTACCCCGCA CTTCGGTGAG AGGCTTTCAG GAGTTCTCGC GATTGCTGTG TGTGGTACAC CAGATCCCTG GCCTGGACGT CCTGCTTGGC TATACGGATG CTCACGGTGA CTTGCTGCCC CTCACCAACG ATGACAGTTT GCACCGGGCC CTGGCCAGCG GGCCCCCACC TCTGCGCCTC TTGGTTCAGA AACGGGCAGA AGGTGACTCG AGTGGCCTGG CTTTTGCCTC CAACTCTCTA CAAAGGCGCA AGAAAGGGCT CCTGCTACGA CCAGTGGCAC CTCTGCGCAC CAGGCCACCC TTGTTAATCA GCTTGCCCCA AGATTTCCGC CAGGTGTCTT CAGTTATAGA TGTGGACCTA CTACCTGAGA CCCACCGACG AGTGAGGCTG CACAAACATG GTTCAGACCG TCCCCTGGGC TTCTACATTC GAGATGGCAT GAGTGTTCGC GTGGCTCCCC AGGGCCTGGA GCGGGTTCCA GGTATCTTCA TCTCCCGCCT GGTACGTGGG GGCCTGGCTG AGAGTACAGG GCTGCTGGCG GTCAGTGATG AGATCCTTGA GGTCAACGGC ATTGAGGTGG CCGGGAAGAC CTTGGACCAA GTGACGGACA TGATGGTCGC CAACAGCCAC AACCTCATCG TCACTGTCAA GCCTGCCAAC CAGCGTAATA ATGTGGTACG GGGGGCATCT GGGCGTCTGA CAGGGCCTTC CTCTGTAGGG CCTGGGCCTA CTGATCCTGA CAGTGACGAT GACAGCAGTG ACCTGGTCAT TGAGAATCGC CACCCTCCCT GTTCTAATGG GCTGTCTCAG GGGCCCCTGT GCTGGGACCT GCAACCTGGC TGCCTACTTC CTGGTGCTGG CAGCTCTCTG CCCTCCTTGG ATAGCAGAGA GCAAGCCAAT TCTGGCTGGG GGAATGGCAT GCGAGGTGAT GTTAGCGGAT TCAGCCTCTG A
The stop codons will be deleted if pcDNA3.1+ /C-(K)DYK vector is selected.
CloneID
OMu19843
Clone ID Related Accession (Same CDS sequence)
NM_001047436.2
Accession Version
NM_001047436.2 Latest version!
Documents for ORF clone product in default vector
Sequence Information
ORF Nucleotide Sequence (Length: 993bp)
Protein sequence
SNP
Vector
pcDNA3.1+ /C-(K)DYK or customized vector
User Manual
Clone information
Clone Map
MSDS
Tag on pcDNA3.1+ /C-(K)DYK
C terminal DYKDDDDK tags
ORF Insert Method
CloneEZ™ Seamless cloning technology
Insert Structure
linear
Update Date
2019-09-30
Organism
Mus musculus(house mouse)
Product
partitioning defective 6 homolog alpha isoform 3
Comment
Comment: VALIDATED REFSEQ: This record has undergone validation or preliminary review. The reference sequence was derived from AC152826.2, CX220562.1, AK158848.1 and BF466814.1. On Nov 2, 2013 this sequence version replaced NM_001047436.1.
Transcript Variant: This variant (3) differs in the 5' UTR, lacks a portion of the 5' coding region, and initiates translation at an alternate start codon. This encodes a shorter protein (isoform 3), compared to isoform 1.
Publication Note: This RefSeq record includes a subset of the publications that are available for this gene. Please see the Gene record to access additional publications.
##Evidence-Data-START##
Transcript exon combination :: BU939458.1, CX206739.1 [ECO:0000332]
RNAseq introns :: single sample supports all introns SAMN00849374, SAMN00849375 [ECO:0000348]
##Evidence-Data-END##
COMPLETENESS: complete on the 3' end.
1 61 121 181 241 301 361 421 481 541 601 661 721 781 841 901 961 ATGAGAGCGA TCCAGTTTGA CGCCGAGTTC CGACGCTTTG CACTACCCCG CACTTCGGTG AGAGGCTTTC AGGAGTTCTC GCGATTGCTG TGTGTGGTAC ACCAGATCCC TGGCCTGGAC GTCCTGCTTG GCTATACGGA TGCTCACGGT GACTTGCTGC CCCTCACCAA CGATGACAGT TTGCACCGGG CCCTGGCCAG CGGGCCCCCA CCTCTGCGCC TCTTGGTTCA GAAACGGGCA GAAGGTGACT CGAGTGGCCT GGCTTTTGCC TCCAACTCTC TACAAAGGCG CAAGAAAGGG CTCCTGCTAC GACCAGTGGC ACCTCTGCGC ACCAGGCCAC CCTTGTTAAT CAGCTTGCCC CAAGATTTCC GCCAGGTGTC TTCAGTTATA GATGTGGACC TACTACCTGA GACCCACCGA CGAGTGAGGC TGCACAAACA TGGTTCAGAC CGTCCCCTGG GCTTCTACAT TCGAGATGGC ATGAGTGTTC GCGTGGCTCC CCAGGGCCTG GAGCGGGTTC CAGGTATCTT CATCTCCCGC CTGGTACGTG GGGGCCTGGC TGAGAGTACA GGGCTGCTGG CGGTCAGTGA TGAGATCCTT GAGGTCAACG GCATTGAGGT GGCCGGGAAG ACCTTGGACC AAGTGACGGA CATGATGGTC GCCAACAGCC ACAACCTCAT CGTCACTGTC AAGCCTGCCA ACCAGCGTAA TAATGTGGTA CGGGGGGCAT CTGGGCGTCT GACAGGGCCT TCCTCTGTAG GGCCTGGGCC TACTGATCCT GACAGTGACG ATGACAGCAG TGACCTGGTC ATTGAGAATC GCCACCCTCC CTGTTCTAAT GGGCTGTCTC AGGGGCCCCT GTGCTGGGAC CTGCAACCTG GCTGCCTACT TCCTGGTGCT GGCAGCTCTC TGCCCTCCTT GGATAGCAGA GAGCAAGCCA ATTCTGGCTG GGGGAATGGC ATGCGAGGTG ATGTTAGCGG ATTCAGCCTC TGA
The stop codons will be deleted if pcDNA3.1+ /C-(K)DYK vector is selected.
RefSeq
NP_001040901.1
CDS 156..1148
Translation
Target ORF information:
RefSeq Version NM_001047436.2
Organism Mus musculus(house mouse)
Definition Mus musculus par-6 family cell polarity regulator alpha (Pard6a), transcript variant 3, mRNA.
Target ORF information:
Epitope DYKDDDDK
Bacterial selection AMPR
Mammalian selection NeoR
Vector pcDNA3.1+ /C-(K)DYK
NM_001047436.2
ORF Insert Sequence:
1 61 121 181 241 301 361 421 481 541 601 661 721 781 841 901 961 ATGAGAGCGA TCCAGTTTGA CGCCGAGTTC CGACGCTTTG CACTACCCCG CACTTCGGTG AGAGGCTTTC AGGAGTTCTC GCGATTGCTG TGTGTGGTAC ACCAGATCCC TGGCCTGGAC GTCCTGCTTG GCTATACGGA TGCTCACGGT GACTTGCTGC CCCTCACCAA CGATGACAGT TTGCACCGGG CCCTGGCCAG CGGGCCCCCA CCTCTGCGCC TCTTGGTTCA GAAACGGGCA GAAGGTGACT CGAGTGGCCT GGCTTTTGCC TCCAACTCTC TACAAAGGCG CAAGAAAGGG CTCCTGCTAC GACCAGTGGC ACCTCTGCGC ACCAGGCCAC CCTTGTTAAT CAGCTTGCCC CAAGATTTCC GCCAGGTGTC TTCAGTTATA GATGTGGACC TACTACCTGA GACCCACCGA CGAGTGAGGC TGCACAAACA TGGTTCAGAC CGTCCCCTGG GCTTCTACAT TCGAGATGGC ATGAGTGTTC GCGTGGCTCC CCAGGGCCTG GAGCGGGTTC CAGGTATCTT CATCTCCCGC CTGGTACGTG GGGGCCTGGC TGAGAGTACA GGGCTGCTGG CGGTCAGTGA TGAGATCCTT GAGGTCAACG GCATTGAGGT GGCCGGGAAG ACCTTGGACC AAGTGACGGA CATGATGGTC GCCAACAGCC ACAACCTCAT CGTCACTGTC AAGCCTGCCA ACCAGCGTAA TAATGTGGTA CGGGGGGCAT CTGGGCGTCT GACAGGGCCT TCCTCTGTAG GGCCTGGGCC TACTGATCCT GACAGTGACG ATGACAGCAG TGACCTGGTC ATTGAGAATC GCCACCCTCC CTGTTCTAAT GGGCTGTCTC AGGGGCCCCT GTGCTGGGAC CTGCAACCTG GCTGCCTACT TCCTGGTGCT GGCAGCTCTC TGCCCTCCTT GGATAGCAGA GAGCAAGCCA ATTCTGGCTG GGGGAATGGC ATGCGAGGTG ATGTTAGCGG ATTCAGCCTC TGA
The stop codons will be deleted if pcDNA3.1+ /C-(K)DYK vector is selected.
CloneID
OMu19878
Clone ID Related Accession (Same CDS sequence)
NM_001286345.1
Accession Version
NM_001286345.1 Latest version!
Documents for ORF clone product in default vector
Sequence Information
ORF Nucleotide Sequence (Length: 951bp)
Protein sequence
SNP
Vector
pcDNA3.1+ /C-(K)DYK or customized vector
User Manual
Clone information
Clone Map
MSDS
Tag on pcDNA3.1+ /C-(K)DYK
C terminal DYKDDDDK tags
ORF Insert Method
CloneEZ™ Seamless cloning technology
Insert Structure
linear
Update Date
2019-09-30
Organism
Mus musculus(house mouse)
Product
partitioning defective 6 homolog alpha isoform 5
Comment
Comment: VALIDATED REFSEQ: This record has undergone validation or preliminary review. The reference sequence was derived from AC152826.2, AK158848.1, CX206739.1 and BF466814.1.
Transcript Variant: This variant (5) uses an alternate in-frame splice site in the coding region, compared to variant 1. This encodes a shorter protein (isoform 4), compared to isoform 1.
Publication Note: This RefSeq record includes a subset of the publications that are available for this gene. Please see the Gene record to access additional publications.
##Evidence-Data-START##
Transcript exon combination :: BC061114.1 [ECO:0000332]
RNAseq introns :: single sample supports all introns SAMN00849374, SAMN00849375 [ECO:0000348]
##Evidence-Data-END##
COMPLETENESS: complete on the 3' end.
1 61 121 181 241 301 361 421 481 541 601 661 721 781 841 901 ATGGCCAGGC CGCAGAGGAC TCCGGCGCGC AGTCCCGATA GCATCGTCGA GGTGAAGAGC AAATTTGACG CCGAGTTCCG ACGCTTTGCA CTACCCCGCA CTTCGGTGAG AGGCTTTCAG GAGTTCTCGC GATTGCTGTG TGTGGTACAC CAGATCCCTG GCCTGGACGT CCTGCTTGGC TATACGGATG CTCACGCAGA AGGTGACTCG AGTGGCCTGG CTTTTGCCTC CAACTCTCTA CAAAGGCGCA AGAAAGGGCT CCTGCTACGA CCAGTGGCAC CTCTGCGCAC CAGGCCACCC TTGTTAATCA GCTTGCCCCA AGATTTCCGC CAGGTGTCTT CAGTTATAGA TGTGGACCTA CTACCTGAGA CCCACCGACG AGTGAGGCTG CACAAACATG GTTCAGACCG TCCCCTGGGC TTCTACATTC GAGATGGCAT GAGTGTTCGC GTGGCTCCCC AGGGCCTGGA GCGGGTTCCA GGTATCTTCA TCTCCCGCCT GGTACGTGGG GGCCTGGCTG AGAGTACAGG GCTGCTGGCG GTCAGTGATG AGATCCTTGA GGTCAACGGC ATTGAGGTGG CCGGGAAGAC CTTGGACCAA GTGACGGACA TGATGGTCGC CAACAGCCAC AACCTCATCG TCACTGTCAA GCCTGCCAAC CAGCGTAATA ATGTGGTACG GGGGGCATCT GGGCGTCTGA CAGGGCCTTC CTCTGTAGGG CCTGGGCCTA CTGATCCTGA CAGTGACGAT GACAGCAGTG ACCTGGTCAT TGAGAATCGC CACCCTCCCT GTTCTAATGG GCTGTCTCAG GGGCCCCTGT GCTGGGACCT GCAACCTGGC TGCCTACTTC CTGGTGCTGG CAGCTCTCTG CCCTCCTTGG ATAGCAGAGA GCAAGCCAAT TCTGGCTGGG GGAATGGCAT GCGAGGTGAT GTTAGCGGAT TCAGCCTCTG A
The stop codons will be deleted if pcDNA3.1+ /C-(K)DYK vector is selected.
RefSeq
NP_001273274.1
CDS 95..1045
Translation
Target ORF information:
RefSeq Version NM_001286345.1
Organism Mus musculus(house mouse)
Definition Mus musculus par-6 family cell polarity regulator alpha (Pard6a), transcript variant 5, mRNA.
Target ORF information:
Epitope DYKDDDDK
Bacterial selection AMPR
Mammalian selection NeoR
Vector pcDNA3.1+ /C-(K)DYK
NM_001286345.1
ORF Insert Sequence:
1 61 121 181 241 301 361 421 481 541 601 661 721 781 841 901 ATGGCCAGGC CGCAGAGGAC TCCGGCGCGC AGTCCCGATA GCATCGTCGA GGTGAAGAGC AAATTTGACG CCGAGTTCCG ACGCTTTGCA CTACCCCGCA CTTCGGTGAG AGGCTTTCAG GAGTTCTCGC GATTGCTGTG TGTGGTACAC CAGATCCCTG GCCTGGACGT CCTGCTTGGC TATACGGATG CTCACGCAGA AGGTGACTCG AGTGGCCTGG CTTTTGCCTC CAACTCTCTA CAAAGGCGCA AGAAAGGGCT CCTGCTACGA CCAGTGGCAC CTCTGCGCAC CAGGCCACCC TTGTTAATCA GCTTGCCCCA AGATTTCCGC CAGGTGTCTT CAGTTATAGA TGTGGACCTA CTACCTGAGA CCCACCGACG AGTGAGGCTG CACAAACATG GTTCAGACCG TCCCCTGGGC TTCTACATTC GAGATGGCAT GAGTGTTCGC GTGGCTCCCC AGGGCCTGGA GCGGGTTCCA GGTATCTTCA TCTCCCGCCT GGTACGTGGG GGCCTGGCTG AGAGTACAGG GCTGCTGGCG GTCAGTGATG AGATCCTTGA GGTCAACGGC ATTGAGGTGG CCGGGAAGAC CTTGGACCAA GTGACGGACA TGATGGTCGC CAACAGCCAC AACCTCATCG TCACTGTCAA GCCTGCCAAC CAGCGTAATA ATGTGGTACG GGGGGCATCT GGGCGTCTGA CAGGGCCTTC CTCTGTAGGG CCTGGGCCTA CTGATCCTGA CAGTGACGAT GACAGCAGTG ACCTGGTCAT TGAGAATCGC CACCCTCCCT GTTCTAATGG GCTGTCTCAG GGGCCCCTGT GCTGGGACCT GCAACCTGGC TGCCTACTTC CTGGTGCTGG CAGCTCTCTG CCCTCCTTGG ATAGCAGAGA GCAAGCCAAT TCTGGCTGGG GGAATGGCAT GCGAGGTGAT GTTAGCGGAT TCAGCCTCTG A
The stop codons will be deleted if pcDNA3.1+ /C-(K)DYK vector is selected.
CloneID
OMu19773
Clone ID Related Accession (Same CDS sequence)
NM_001047435.2
Accession Version
NM_001047435.2 Latest version!
Documents for ORF clone product in default vector
Sequence Information
ORF Nucleotide Sequence (Length: 1038bp)
Protein sequence
SNP
Vector
pcDNA3.1+ /C-(K)DYK or customized vector
User Manual
Clone information
Clone Map
MSDS
Tag on pcDNA3.1+ /C-(K)DYK
C terminal DYKDDDDK tags
ORF Insert Method
CloneEZ™ Seamless cloning technology
Insert Structure
linear
Update Date
2019-12-27
Organism
Mus musculus(house mouse)
Product
partitioning defective 6 homolog alpha isoform 2
Comment
Comment: VALIDATED REFSEQ: This record has undergone validation or preliminary review. The reference sequence was derived from AC152826.2, AK158848.1 and BF466814.1. On Nov 2, 2013 this sequence version replaced NM_001047435.1.
Transcript Variant: This variant (2) uses an alternate in-frame splice site in the 3' coding region, compared to variant 1. This results in a shorter protein (isoform 2), compared to isoform 1.
Publication Note: This RefSeq record includes a subset of the publications that are available for this gene. Please see the Gene record to access additional publications.
##Evidence-Data-START##
Transcript exon combination :: AK158848.1, BC049593.1 [ECO:0000332]
RNAseq introns :: single sample supports all introns SAMN00849374, SAMN00849375 [ECO:0000348]
##Evidence-Data-END##
COMPLETENESS: complete on the 3' end.
1 61 121 181 241 301 361 421 481 541 601 661 721 781 841 901 961 1021 ATGGCCAGGC CGCAGAGGAC TCCGGCGCGC AGTCCCGATA GCATCGTCGA GGTGAAGAGC AAATTTGACG CCGAGTTCCG ACGCTTTGCA CTACCCCGCA CTTCGGTGAG AGGCTTTCAG GAGTTCTCGC GATTGCTGTG TGTGGTACAC CAGATCCCTG GCCTGGACGT CCTGCTTGGC TATACGGATG CTCACGGTGA CTTGCTGCCC CTCACCAACG ATGACAGTTT GCACCGGGCC CTGGCCAGCG GGCCCCCACC TCTGCGCCTC TTGGTTCAGA AACGGGAAGG TGACTCGAGT GGCCTGGCTT TTGCCTCCAA CTCTCTACAA AGGCGCAAGA AAGGGCTCCT GCTACGACCA GTGGCACCTC TGCGCACCAG GCCACCCTTG TTAATCAGCT TGCCCCAAGA TTTCCGCCAG GTGTCTTCAG TTATAGATGT GGACCTACTA CCTGAGACCC ACCGACGAGT GAGGCTGCAC AAACATGGTT CAGACCGTCC CCTGGGCTTC TACATTCGAG ATGGCATGAG TGTTCGCGTG GCTCCCCAGG GCCTGGAGCG GGTTCCAGGT ATCTTCATCT CCCGCCTGGT ACGTGGGGGC CTGGCTGAGA GTACAGGGCT GCTGGCGGTC AGTGATGAGA TCCTTGAGGT CAACGGCATT GAGGTGGCCG GGAAGACCTT GGACCAAGTG ACGGACATGA TGGTCGCCAA CAGCCACAAC CTCATCGTCA CTGTCAAGCC TGCCAACCAG CGTAATAATG TGGTACGGGG GGCATCTGGG CGTCTGACAG GGCCTTCCTC TGTAGGGCCT GGGCCTACTG ATCCTGACAG TGACGATGAC AGCAGTGACC TGGTCATTGA GAATCGCCAC CCTCCCTGTT CTAATGGGCT GTCTCAGGGG CCCCTGTGCT GGGACCTGCA ACCTGGCTGC CTACTTCCTG GTGCTGGCAG CTCTCTGCCC TCCTTGGATA GCAGAGAGCA AGCCAATTCT GGCTGGGGGA ATGGCATGCG AGGTGATGTT AGCGGATTCA GCCTCTGA
The stop codons will be deleted if pcDNA3.1+ /C-(K)DYK vector is selected.
RefSeq
NP_001040900.1
CDS 95..1132
Translation
Target ORF information:
RefSeq Version NM_001047435.2
Organism Mus musculus(house mouse)
Definition Mus musculus par-6 family cell polarity regulator alpha (Pard6a), transcript variant 2, mRNA.
Target ORF information:
Epitope DYKDDDDK
Bacterial selection AMPR
Mammalian selection NeoR
Vector pcDNA3.1+ /C-(K)DYK
NM_001047435.2
ORF Insert Sequence:
1 61 121 181 241 301 361 421 481 541 601 661 721 781 841 901 961 1021 ATGGCCAGGC CGCAGAGGAC TCCGGCGCGC AGTCCCGATA GCATCGTCGA GGTGAAGAGC AAATTTGACG CCGAGTTCCG ACGCTTTGCA CTACCCCGCA CTTCGGTGAG AGGCTTTCAG GAGTTCTCGC GATTGCTGTG TGTGGTACAC CAGATCCCTG GCCTGGACGT CCTGCTTGGC TATACGGATG CTCACGGTGA CTTGCTGCCC CTCACCAACG ATGACAGTTT GCACCGGGCC CTGGCCAGCG GGCCCCCACC TCTGCGCCTC TTGGTTCAGA AACGGGAAGG TGACTCGAGT GGCCTGGCTT TTGCCTCCAA CTCTCTACAA AGGCGCAAGA AAGGGCTCCT GCTACGACCA GTGGCACCTC TGCGCACCAG GCCACCCTTG TTAATCAGCT TGCCCCAAGA TTTCCGCCAG GTGTCTTCAG TTATAGATGT GGACCTACTA CCTGAGACCC ACCGACGAGT GAGGCTGCAC AAACATGGTT CAGACCGTCC CCTGGGCTTC TACATTCGAG ATGGCATGAG TGTTCGCGTG GCTCCCCAGG GCCTGGAGCG GGTTCCAGGT ATCTTCATCT CCCGCCTGGT ACGTGGGGGC CTGGCTGAGA GTACAGGGCT GCTGGCGGTC AGTGATGAGA TCCTTGAGGT CAACGGCATT GAGGTGGCCG GGAAGACCTT GGACCAAGTG ACGGACATGA TGGTCGCCAA CAGCCACAAC CTCATCGTCA CTGTCAAGCC TGCCAACCAG CGTAATAATG TGGTACGGGG GGCATCTGGG CGTCTGACAG GGCCTTCCTC TGTAGGGCCT GGGCCTACTG ATCCTGACAG TGACGATGAC AGCAGTGACC TGGTCATTGA GAATCGCCAC CCTCCCTGTT CTAATGGGCT GTCTCAGGGG CCCCTGTGCT GGGACCTGCA ACCTGGCTGC CTACTTCCTG GTGCTGGCAG CTCTCTGCCC TCCTTGGATA GCAGAGAGCA AGCCAATTCT GGCTGGGGGA ATGGCATGCG AGGTGATGTT AGCGGATTCA GCCTCTGA
The stop codons will be deleted if pcDNA3.1+ /C-(K)DYK vector is selected.
Zeb1 controls neuron differentiation and germinal zone exit by a mesenchymal-epithelial-like transition.
eLife5(2016 05)
Singh S,Howell D,Trivedi N,Kessler K,Ong T,Rosmaninho P,Raposo AA,Robinson G,Roussel MF,Castro DS,Solecki DJ