Gene Symbol | 2310022A10Rik |
Entrez Gene ID | 66367 |
Full Name | RIKEN cDNA 2310022A10 gene |
General protein information |
|
Gene Type | protein-coding |
Organism | Mus musculus(house mouse) |
Genome |
ORF » Species Summary » Mus musculus » 2310022A10Rik cDNA ORF clone
Gene Symbol | 2310022A10Rik |
Entrez Gene ID | 66367 |
Full Name | RIKEN cDNA 2310022A10 gene |
General protein information |
|
Gene Type | protein-coding |
Organism | Mus musculus(house mouse) |
Genome |
mRNA | Protein | Name |
---|---|---|
NM_001122767.1 | NP_001116239.1 | uncharacterized protein C19orf47 homolog isoform 2 |
XM_017312231.2 | XP_017167720.1 | uncharacterized protein C19orf47 homolog isoform X2 |
XM_017312231.1 | XP_017167720.1 | uncharacterized protein C19orf47 homolog isoform X2 |
XM_006540290.3 | XP_006540353.1 | uncharacterized protein C19orf47 homolog isoform X1 |
NM_001374792.1 | NP_001361721.1 | uncharacterized protein C19orf47 homolog isoform 3 |
NM_175107.5 | NP_780316.3 | uncharacterized protein C19orf47 homolog isoform 1 |
Bos taurus (cattle) | C18H19orf47 | NP_001073760.1 |
Xenopus tropicalis (tropical clawed frog) | c19orf47 | NP_001005016.1 |
Pan troglodytes (chimpanzee) | C19H19orf47 | XP_001144328.1 |
Canis lupus familiaris (dog) | C1H19orf47 | XP_005616622.1 |
Mus musculus (house mouse) | 2310022A10Rik | NP_780316.3 |
Rattus norvegicus (Norway rat) | RGD1307554 | NP_001103134.1 |
Homo sapiens (human) | C19orf47 | NP_001243369.1 |
Danio rerio (zebrafish) | si:ch211-160d20.3 | NP_001038706.1 |
C19H19orf47 | XP_001095658.2 |
BayGenomics: a resource of insertional mutations in mouse embryonic stem cells.
Stryke D, Kawamoto M, Huang CC, Johns SJ, King LA, Harper CA, Meng EC, Lee RE, Yee A, L'Italien L, Chuang PT, Young SG, Skarnes WC, Babbitt PC, Ferrin TE
Nucleic acids research31(1)278-81(2003 Jan)
Assembly, verification, and initial annotation of the NIA mouse 7.4K cDNA clone set.
VanBuren V, Piao Y, Dudekula DB, Qian Y, Carter MG, Martin PR, Stagg CA, Bassey UC, Aiba K, Hamatani T, Kargul GJ, Luo AG, Kelso J, Hide W, Ko MS
Genome research12(12)1999-2003(2002 Dec)
GeneRIFs: Gene References Into Functions What's a GeneRIF?
The following 2310022A10Rik gene cDNA ORF clone sequences were retrieved from the NCBI Reference Sequence Database (RefSeq). These sequences represent the protein coding region of the 2310022A10Rik cDNA ORF which is encoded by the open reading frame (ORF) sequence. ORF sequences can be delivered in our standard vector, pcDNA3.1+/C-(K)DYK or the vector of your choice as an expression/transfection-ready ORF clone. Not the clone you want? Click here to find your clone.
CloneID | OMu04865 | |
Clone ID Related Accession (Same CDS sequence) | NM_175107.5 | |
Accession Version | NM_175107.5 Latest version! | Documents for ORF clone product in default vector |
Sequence Information | ORF Nucleotide Sequence (Length: 1242bp) Protein sequence SNP |
|
Vector | pcDNA3.1-C-(k)DYK or customized vector | User Manual |
Clone information | Clone Map | MSDS |
Tag on pcDNA3.1+/C-(K)DYK | C terminal DYKDDDDK tags | |
ORF Insert Method | CloneEZ™ Seamless cloning technology | |
Insert Structure | linear | |
Update Date | 2019-10-15 | |
Organism | Mus musculus(house mouse) | |
Product | uncharacterized protein C19orf47 homolog isoform 1 | |
Comment | Comment: VALIDATED REFSEQ: This record has undergone validation or preliminary review. The reference sequence was derived from BB853451.1, AK077369.1, BE854222.1, BX522780.1, BQ560353.1 and BU555303.1. On Nov 17, 2012 this sequence version replaced NM_175107.4. Transcript Variant: This variant (1) represents the longest transcript and encodes the longest isoform (1). ##Evidence-Data-START## Transcript exon combination :: BC023369.1, SRR1660815.278933.1 [ECO:0000332] RNAseq introns :: single sample supports all introns SAMN00849374, SAMN00849375 [ECO:0000348] ##Evidence-Data-END## COMPLETENESS: complete on the 3' end. |
1 | ATGGGCTTCA GAATCGGAGA GAACTTGCTT TTCAATCTCA GAAAGGCTCC AGGAAGCAGG |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
RefSeq | NP_780316.3 |
CDS | 141..1382 |
Translation |
Target ORF information:
Target ORF information:
|
NM_175107.5 |
1 | ATGGGCTTCA GAATCGGAGA GAACTTGCTT TTCAATCTCA GAAAGGCTCC AGGAAGCAGG |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
CloneID | OMu13021 | |
Clone ID Related Accession (Same CDS sequence) | NM_001122767.1 | |
Accession Version | NM_001122767.1 Latest version! | Documents for ORF clone product in default vector |
Sequence Information | ORF Nucleotide Sequence (Length: 1116bp) Protein sequence SNP |
|
Vector | pcDNA3.1-C-(k)DYK or customized vector | User Manual |
Clone information | Clone Map | MSDS |
Tag on pcDNA3.1+/C-(K)DYK | C terminal DYKDDDDK tags | |
ORF Insert Method | CloneEZ™ Seamless cloning technology | |
Insert Structure | linear | |
Update Date | 2019-06-07 | |
Organism | Mus musculus(house mouse) | |
Product | uncharacterized protein C19orf47 homolog isoform 2 | |
Comment | Comment: VALIDATED REFSEQ: This record has undergone validation or preliminary review. The reference sequence was derived from AK077369.1, BQ560353.1 and BU555303.1. Transcript Variant: This variant (2) differs in the 5' UTR and has multiple coding region differences, compared to variant 1. These differences cause translation initiation at a downstream in-frame ATG and result in an isoform (2) with a distinct C-terminus and shorter N-terminus when compared to isoform 1. ##Evidence-Data-START## Transcript exon combination :: AK009941.1, AK009456.1 [ECO:0000332] RNAseq introns :: single sample supports all introns SAMN00849374, SAMN00849375 [ECO:0000348] ##Evidence-Data-END## ##RefSeq-Attributes-START## CDS uses downstream in-frame AUG :: upstream AUG and CDS extension is not conserved ##RefSeq-Attributes-END## |
1 | ATGGTCTCAG TGACTATGGC CACTTCCGAG TGGATCCAGT TCTTCAAGGA AGCCGGCATT |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
RefSeq | NP_001116239.1 |
CDS | 110..1225 |
Translation |
Target ORF information:
Target ORF information:
|
NM_001122767.1 |
1 | ATGGTCTCAG TGACTATGGC CACTTCCGAG TGGATCCAGT TCTTCAAGGA AGCCGGCATT |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
CloneID | OMu38456 | |
Clone ID Related Accession (Same CDS sequence) | XM_006540290.3 , NM_001374792.1 | |
Accession Version | XM_006540290.3 Latest version! | Documents for ORF clone product in default vector |
Sequence Information | ORF Nucleotide Sequence (Length: 1194bp) Protein sequence SNP |
|
Vector | pcDNA3.1-C-(k)DYK or customized vector | User Manual |
Clone information | Clone Map | MSDS |
Tag on pcDNA3.1+/C-(K)DYK | C terminal DYKDDDDK tags | |
ORF Insert Method | CloneEZ™ Seamless cloning technology | |
Insert Structure | linear | |
Update Date | 2016-06-21 | |
Organism | Mus musculus(house mouse) | |
Product | uncharacterized protein C19orf47 homolog isoform X1 | |
Comment | Comment: MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NC_000073.6) annotated using gene prediction method: Gnomon, supported by mRNA and EST evidence. Also see: Documentation of NCBI's Annotation Process On Jun 22, 2016 this sequence version replaced XM_006540290.2. ##Genome-Annotation-Data-START## Annotation Provider :: NCBI Annotation Status :: Full annotation Annotation Version :: Mus musculus Annotation Release 106 Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline Annotation Software Version :: 7.1 Annotation Method :: Best-placed RefSeq; Gnomon Features Annotated :: Gene; mRNA; CDS; ncRNA ##Genome-Annotation-Data-END## |
1 | ATGGGCTTCA GAATCGGAGA GAACTTGCTT TTCAATCTCA GAAAGGCTCC AGGAAGCAGG |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
RefSeq | XP_006540353.1 |
CDS | 170..1363 |
Translation |
Target ORF information:
Target ORF information:
|
XM_006540290.3 |
1 | ATGGGCTTCA GAATCGGAGA GAACTTGCTT TTCAATCTCA GAAAGGCTCC AGGAAGCAGG |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
CloneID | OMu38456 | |
Clone ID Related Accession (Same CDS sequence) | XM_006540290.3 , NM_001374792.1 | |
Accession Version | NM_001374792.1 Latest version! | Documents for ORF clone product in default vector |
Sequence Information | ORF Nucleotide Sequence (Length: 1194bp) Protein sequence SNP |
|
Vector | pcDNA3.1-C-(k)DYK or customized vector | User Manual |
Clone information | Clone Map | MSDS |
Tag on pcDNA3.1+/C-(K)DYK | C terminal DYKDDDDK tags | |
ORF Insert Method | CloneEZ™ Seamless cloning technology | |
Insert Structure | linear | |
Update Date | 2019-10-24 | |
Organism | Mus musculus(house mouse) | |
Product | uncharacterized protein C19orf47 homolog isoform 3 | |
Comment | Comment: VALIDATED REFSEQ: This record has undergone validation or preliminary review. The reference sequence was derived from AC158304.11 and AC074312.64. On Oct 16, 2019 this sequence version replaced XM_006540290.4. Sequence Note: The RefSeq transcript and protein were derived from genomic sequence to make the sequence consistent with the reference genome assembly. The genomic coordinates used for the transcript record were based on alignments. ##Evidence-Data-START## Transcript exon combination :: SRR7345562.2262324.1, SRR7652917.823549.1 [ECO:0000332] RNAseq introns :: single sample supports all introns SAMN00849374, SAMN00849375 [ECO:0000348] ##Evidence-Data-END## COMPLETENESS: complete on the 3' end. |
1 | ATGGGCTTCA GAATCGGAGA GAACTTGCTT TTCAATCTCA GAAAGGCTCC AGGAAGCAGG |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
RefSeq | NP_001361721.1 |
CDS | 151..1344 |
Translation |
Target ORF information:
Target ORF information:
|
NM_001374792.1 |
1 | ATGGGCTTCA GAATCGGAGA GAACTTGCTT TTCAATCTCA GAAAGGCTCC AGGAAGCAGG |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
CloneID | OMu82187 | |
Clone ID Related Accession (Same CDS sequence) | XM_017312231.2 , XM_017312231.1 | |
Accession Version | XM_017312231.2 Latest version! | Documents for ORF clone product in default vector |
Sequence Information | ORF Nucleotide Sequence (Length: 813bp) Protein sequence SNP |
|
Vector | pcDNA3.1-C-(k)DYK or customized vector | User Manual |
Clone information | Clone Map | MSDS |
Tag on pcDNA3.1+/C-(K)DYK | C terminal DYKDDDDK tags | |
ORF Insert Method | CloneEZ™ Seamless cloning technology | |
Insert Structure | linear | |
Update Date | 2019-08-07 | |
Organism | Mus musculus(house mouse) | |
Product | uncharacterized protein C19orf47 homolog isoform X2 | |
Comment | Comment: MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NC_000073.6) annotated using gene prediction method: Gnomon, supported by mRNA and EST evidence. Also see: Documentation of NCBI's Annotation Process On Aug 8, 2019 this sequence version replaced XM_017312231.1. ##Genome-Annotation-Data-START## Annotation Provider :: NCBI Annotation Status :: Full annotation Annotation Name :: Mus musculus Annotation Release 108 Annotation Version :: 108 Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline Annotation Software Version :: 8.2 Annotation Method :: Best-placed RefSeq; Gnomon Features Annotated :: Gene; mRNA; CDS; ncRNA ##Genome-Annotation-Data-END## |
1 | ATGGGCTTCA GAATCGGAGA GAACTTGCTT TTCAATCTCA GAAAGGCTCC AGGAAGCAGG |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
RefSeq | XP_017167720.1 |
CDS | 188..1000 |
Translation |
Target ORF information:
Target ORF information:
|
XM_017312231.2 |
1 | ATGGGCTTCA GAATCGGAGA GAACTTGCTT TTCAATCTCA GAAAGGCTCC AGGAAGCAGG |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
CloneID | OMu82187 | |
Clone ID Related Accession (Same CDS sequence) | XM_017312231.2 , XM_017312231.1 | |
Accession Version | XM_017312231.1 | Documents for ORF clone product in default vector |
Sequence Information | ORF Nucleotide Sequence (Length: 813bp) Protein sequence SNP |
|
Vector | pcDNA3.1-C-(k)DYK or customized vector | User Manual |
Clone information | Clone Map | MSDS |
Tag on pcDNA3.1+/C-(K)DYK | C terminal DYKDDDDK tags | |
ORF Insert Method | CloneEZ™ Seamless cloning technology | |
Insert Structure | linear | |
Update Date | 2016-06-21 | |
Organism | Mus musculus(house mouse) | |
Product | uncharacterized protein C19orf47 homolog isoform X2 | |
Comment | Comment: MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NC_000073.6) annotated using gene prediction method: Gnomon, supported by mRNA and EST evidence. Also see: Documentation of NCBI's Annotation Process ##Genome-Annotation-Data-START## Annotation Provider :: NCBI Annotation Status :: Full annotation Annotation Version :: Mus musculus Annotation Release 106 Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline Annotation Software Version :: 7.1 Annotation Method :: Best-placed RefSeq; Gnomon Features Annotated :: Gene; mRNA; CDS; ncRNA ##Genome-Annotation-Data-END## |
1 | ATGGGCTTCA GAATCGGAGA GAACTTGCTT TTCAATCTCA GAAAGGCTCC AGGAAGCAGG |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
RefSeq | XP_017167720.1 |
CDS | 171..983 |
Translation |
Target ORF information:
Target ORF information:
|
XM_017312231.1 |
1 | ATGGGCTTCA GAATCGGAGA GAACTTGCTT TTCAATCTCA GAAAGGCTCC AGGAAGCAGG |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
BayGenomics: a resource of insertional mutations in mouse embryonic stem cells. |
Assembly, verification, and initial annotation of the NIA mouse 7.4K cDNA clone set. |