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ORF cDNA Clones and Custom Clones » Species Summary » Mus musculus » 2410004B18Rik cDNA ORF clone
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2410004B18Rik cDNA ORF clone, Mus musculus(house mouse)

Summary

Gene Symbol 2410004B18Rik
Entrez Gene ID 66421
Full Name RIKEN cDNA 2410004B18 gene
Synonyms 4930572C24Rik
General protein information
Preferred Names

RIKEN cDNA 2410004B18 gene

Names

UPF0690 protein C1orf52 homolog
Gene Type protein-coding
Organism Mus musculus(house mouse)
Genome

3

3|3 H2

Reference Sequences (RefSeq)

mRNA and Protein(s)

mRNA Protein Name
XM_006501885.3 XP_006501948.2 UPF0690 protein C1orf52 homolog isoform X1
NM_025555.4 NP_079831.1 UPF0690 protein C1orf52 homolog
NM_025555.5 NP_079831.1 UPF0690 protein C1orf52 homolog isoform 1
NM_001356284.1 NP_001343213.1 UPF0690 protein C1orf52 homolog isoform 2

Pathways from BioSystems


Homologies


Canis lupus familiaris (dog) C6H1orf52 XP_855354.2
Bos taurus (cattle) C3H1orf52 NP_001032681.1
Mus musculus (house mouse) 2410004B18Rik NP_079831.1
Xenopus tropicalis (tropical clawed frog) c1orf52 NP_001015959.1
Pan troglodytes (chimpanzee) C1H1orf52 XP_001141272.1
Danio rerio (zebrafish) zgc:65873 NP_956836.1
Homo sapiens (human) C1orf52 NP_932343.1
Rattus norvegicus (Norway rat) RGD1560065 NP_001128088.1
C1H1orf52 XP_001108738.1
Gallus gallus (chicken) C8H1ORF52 NP_001264489.1

Gene Ontology


Bibliography

Related articles in PubMed

Prediction of Gene Activity in Early B Cell Development Based on an Integrative Multi-Omics Analysis.
Heydarian M, Luperchio TR, Cutler J, Mitchell CJ, Kim MS, Pandey A, Sollner-Webb B, Reddy K
Journal of proteomics & bioinformatics7(2014 Feb)

A conditional knockout resource for the genome-wide study of mouse gene function.
Skarnes WC, Rosen B, West AP, Koutsourakis M, Bushell W, Iyer V, Mujica AO, Thomas M, Harrow J, Cox T, Jackson D, Severin J, Biggs P, Fu J, Nefedov M, de Jong PJ, Stewart AF, Bradley A
Nature474(7351)337-42(2011 Jun)

Genomic analysis of mouse retinal development.
Blackshaw S, Harpavat S, Trimarchi J, Cai L, Huang H, Kuo WP, Weber G, Lee K, Fraioli RE, Cho SH, Yung R, Asch E, Ohno-Machado L, Wong WH, Cepko CL
PLoS biology2(9)E247(2004 Sep)

GeneRIFs: Gene References Into Functions What's a GeneRIF?

The following 2410004B18Rik gene cDNA ORF clone sequences were retrieved from the NCBI Reference Sequence Database (RefSeq). These sequences represent the protein coding region of the 2410004B18Rik cDNA ORF which is encoded by the open reading frame (ORF) sequence. ORF sequences can be delivered in our standard vector, pcDNA3.1+/C-(K)DYK or the vector of your choice as an expression/transfection-ready ORF clone. Not the clone you want? Click here to find your clone.

***CloneID Accession No. Definition **Vector *Turnaround time Price (USD) Select
OMu69937 NM_001356284.1
Latest version!		 Mus musculus RIKEN cDNA 2410004B18 gene (2410004B18Rik), transcript variant 2, mRNA. pcDNA3.1+/C-(K)DYK or customized vector 7-9 $69.30
$99.00
OMu69937 XM_006501885.3
Latest version!		 Mus musculus RIKEN cDNA 2410004B18 gene (2410004B18Rik), transcript variant X1, mRNA. pcDNA3.1+/C-(K)DYK or customized vector 7-9 $69.30
$99.00
OMu00664 NM_025555.5
Latest version!		 Mus musculus RIKEN cDNA 2410004B18 gene (2410004B18Rik), transcript variant 1, mRNA. pcDNA3.1+/C-(K)DYK or customized vector 5-7 $69.30
$99.00
View Old Accession Versions >>
OMu00664 NM_025555.4 Mus musculus RIKEN cDNA 2410004B18 gene (2410004B18Rik), mRNA. pcDNA3.1+/C-(K)DYK or customized vector 5-7 $69.30
$99.00
Hide Old Accession Versions >>

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** You may select a custom vector to replace pcDNA3.1+/C-(K)DYK after clone is added to cart.

** GenScript guarantees 100% sequence accuracy of all synthetic DNA constructs we deliver, but we do not guarantee protein expression in your experimental system. Protein expression is influenced by many factors that may vary between experiments or laboratories. In addition, please pay attention to the signal peptide, propeptide and transit peptide in target ORF, which may affect the choice of vector (N/C terminal tag vector).

***One clone ID might be correlated to multiple accession numbers, which share the same CDS sequence.

Reference Sequences (Refseq)


CloneID OMu69937
Clone ID Related Accession (Same CDS sequence) XM_006501885.3 , NM_001356284.1
Accession Version NM_001356284.1 Latest version! Documents for ORF clone product in default vector
Sequence Information ORF Nucleotide Sequence (Length: 477bp)
Protein sequence
SNP
Vector pcDNA3.1+/C-(K)DYK or customized vector User Manual
Clone information Clone Map MSDS
Tag on pcDNA3.1+/C-(K)DYK C terminal DYKDDDDK tags
ORF Insert Method CloneEZ™ Seamless cloning technology
Insert Structure linear
Update Date 2019-12-28
Organism Mus musculus(house mouse)
Product UPF0690 protein C1orf52 homolog isoform 2
Comment Comment: VALIDATED REFSEQ: This record has undergone validation or preliminary review. The reference sequence was derived from AC123684.8. On Sep 28, 2017 this sequence version replaced XM_006501885.3. Sequence Note: The RefSeq transcript and protein were derived from genomic sequence to make the sequence consistent with the reference genome assembly. The genomic coordinates used for the transcript record were based on alignments. ##Evidence-Data-START## Transcript exon combination :: SRR7345562.2159612.1, SRR7345562.2694165.1 [ECO:0000332] RNAseq introns :: single sample supports all introns SAMN00849378, SAMN00849379 [ECO:0000348] ##Evidence-Data-END## COMPLETENESS: complete on the 3' end. 

1
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121
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361
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ATGGCAGCCG AAGAGAAGGA CCCGTTGAGC TACTTCGCGG CTTACGGGAG CAGCAGCTCC 
GACTCGTCGG ATGAGAACAG CGAGCCGGAA GACGCGGGTC GCAAGGAGGC GGCCTCGGCT 
CCGACGACGG GCGGCCGCGG GAAGCAGGCG GAGAAGCGGC TGCCCGGCCC GGACGAGCTG 
TTCCGCAGCG TGACCCGCCC GGCCTTCCTC TACAACCCGC TCAACAAGCA GATCGACTGG 
GAGCGGCATG TGGTGAAAGC GCCGGAGGAG CCTCCAAAGG AGTTCAAGAT CTGGAAGTCC 
AACTGCGTGC CGCCCCCAGA GACCTACACT ACTGAGAAGA AGCCGCCGCC GCCAGAGCTG 
GACATGGCGA TCAAATGGTC GAATATCTAT GAAGACAATG GAGACGATGC CCCACAGAAC 
GCCAAGAAAG CCAGGCTTCT GCCTGAAGGG GAGGAGACAG TGGAATCAGA GAACTAA

The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.

RefSeq NP_001343213.1
CDS46..522
Translation

Target ORF information:

RefSeq Version NM_001356284.1
Organism Mus musculus(house mouse)
Definition Mus musculus RIKEN cDNA 2410004B18 gene (2410004B18Rik), transcript variant 2, mRNA.

Target ORF information:

Epitope DYKDDDDK
Bacterial selection AMPR
Mammalian selection NeoR
Vector pcDNA3.1+/C-(K)DYK
 NM_001356284.1

ORF Insert Sequence:

1
61
121
181
241
301
361
421
ATGGCAGCCG AAGAGAAGGA CCCGTTGAGC TACTTCGCGG CTTACGGGAG CAGCAGCTCC 
GACTCGTCGG ATGAGAACAG CGAGCCGGAA GACGCGGGTC GCAAGGAGGC GGCCTCGGCT 
CCGACGACGG GCGGCCGCGG GAAGCAGGCG GAGAAGCGGC TGCCCGGCCC GGACGAGCTG 
TTCCGCAGCG TGACCCGCCC GGCCTTCCTC TACAACCCGC TCAACAAGCA GATCGACTGG 
GAGCGGCATG TGGTGAAAGC GCCGGAGGAG CCTCCAAAGG AGTTCAAGAT CTGGAAGTCC 
AACTGCGTGC CGCCCCCAGA GACCTACACT ACTGAGAAGA AGCCGCCGCC GCCAGAGCTG 
GACATGGCGA TCAAATGGTC GAATATCTAT GAAGACAATG GAGACGATGC CCCACAGAAC 
GCCAAGAAAG CCAGGCTTCT GCCTGAAGGG GAGGAGACAG TGGAATCAGA GAACTAA

The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.

CloneID OMu69937
Clone ID Related Accession (Same CDS sequence) XM_006501885.3 , NM_001356284.1
Accession Version XM_006501885.3 Latest version! Documents for ORF clone product in default vector
Sequence Information ORF Nucleotide Sequence (Length: 477bp)
Protein sequence
SNP
Vector pcDNA3.1+/C-(K)DYK or customized vector User Manual
Clone information Clone Map MSDS
Tag on pcDNA3.1+/C-(K)DYK C terminal DYKDDDDK tags
ORF Insert Method CloneEZ™ Seamless cloning technology
Insert Structure linear
Update Date 2016-06-21
Organism Mus musculus(House mouse)
Product UPF0690 protein C1orf52 homolog isoform X1
Comment MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NC_000069.6) annotated using gene prediction method: Gnomon, supported by EST evidence. Also see: Documentation of NCBI's Annotation Process On Jun 22, 2016 this sequence version replaced XM_006501885.2. ##Genome-Annotation-Data-START## Annotation Provider :: NCBI Annotation Status :: Full annotation Annotation Version :: Mus musculus Annotation Release 106 Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline Annotation Software Version :: 7.1 Annotation Method :: Best-placed RefSeq; Gnomon Features Annotated :: Gene; mRNA; CDS; ncRNA ##Genome-Annotation-Data-END## 

1
61
121
181
241
301
361
421
ATGGCAGCCG AAGAGAAGGA CCCGTTGAGC TACTTCGCGG CTTACGGGAG CAGCAGCTCC 
GACTCGTCGG ATGAGAACAG CGAGCCGGAA GACGCGGGTC GCAAGGAGGC GGCCTCGGCT 
CCGACGACGG GCGGCCGCGG GAAGCAGGCG GAGAAGCGGC TGCCCGGCCC GGACGAGCTG 
TTCCGCAGCG TGACCCGCCC GGCCTTCCTC TACAACCCGC TCAACAAGCA GATCGACTGG 
GAGCGGCATG TGGTGAAAGC GCCGGAGGAG CCTCCAAAGG AGTTCAAGAT CTGGAAGTCC 
AACTGCGTGC CGCCCCCAGA GACCTACACT ACTGAGAAGA AGCCGCCGCC GCCAGAGCTG 
GACATGGCGA TCAAATGGTC GAATATCTAT GAAGACAATG GAGACGATGC CCCACAGAAC 
GCCAAGAAAG CCAGGCTTCT GCCTGAAGGG GAGGAGACAG TGGAATCAGA GAACTAA

The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.

RefSeq XP_006501948.2
CDS56..532
Translation

Target ORF information:

RefSeq Version XM_006501885.3
Organism Mus musculus(House mouse)
Definition Mus musculus RIKEN cDNA 2410004B18 gene (2410004B18Rik), transcript variant X1, mRNA.

Target ORF information:

Epitope DYKDDDDK
Bacterial selection AMPR
Mammalian selection NeoR
Vector pcDNA3.1+/C-(K)DYK
 XM_006501885.3

ORF Insert Sequence:

1
61
121
181
241
301
361
421
ATGGCAGCCG AAGAGAAGGA CCCGTTGAGC TACTTCGCGG CTTACGGGAG CAGCAGCTCC 
GACTCGTCGG ATGAGAACAG CGAGCCGGAA GACGCGGGTC GCAAGGAGGC GGCCTCGGCT 
CCGACGACGG GCGGCCGCGG GAAGCAGGCG GAGAAGCGGC TGCCCGGCCC GGACGAGCTG 
TTCCGCAGCG TGACCCGCCC GGCCTTCCTC TACAACCCGC TCAACAAGCA GATCGACTGG 
GAGCGGCATG TGGTGAAAGC GCCGGAGGAG CCTCCAAAGG AGTTCAAGAT CTGGAAGTCC 
AACTGCGTGC CGCCCCCAGA GACCTACACT ACTGAGAAGA AGCCGCCGCC GCCAGAGCTG 
GACATGGCGA TCAAATGGTC GAATATCTAT GAAGACAATG GAGACGATGC CCCACAGAAC 
GCCAAGAAAG CCAGGCTTCT GCCTGAAGGG GAGGAGACAG TGGAATCAGA GAACTAA

The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.

CloneID OMu00664
Clone ID Related Accession (Same CDS sequence) NM_025555.4 , NM_025555.5
Accession Version NM_025555.4 Documents for ORF clone product in default vector
Sequence Information ORF Nucleotide Sequence (Length: 543bp)
Protein sequence
SNP
Vector pcDNA3.1+/C-(K)DYK or customized vector User Manual
Clone information Clone Map MSDS
Tag on pcDNA3.1+/C-(K)DYK C terminal DYKDDDDK tags
ORF Insert Method CloneEZ™ Seamless cloning technology
Insert Structure linear
Update Date 2015-02-14
Organism Mus musculus(House mouse)
Product UPF0690 protein C1orf52 homolog
Comment PREDICTED REFSEQ: This record has not been reviewed and the function is unknown. The reference sequence was derived from AC123684.8. On Oct 19, 2007 this sequence version replaced NM_025555.3. Sequence Note: The RefSeq transcript and protein were derived from genomic sequence to make the sequence consistent with the reference genome assembly. The genomic coordinates used for the transcript record were based on alignments. ##Evidence-Data-START## Transcript exon combination :: AK010378.1, AK019404.1 [ECO:0000332] RNAseq introns :: single sample supports all introns SAMN00849374, SAMN00849375 [ECO:0000348] ##Evidence-Data-END## 

1
61
121
181
241
301
361
421
481
541
ATGGCAGCCG AAGAGAAGGA CCCGTTGAGC TACTTCGCGG CTTACGGGAG CAGCAGCTCC 
GACTCGTCGG ATGAGAACAG CGAGCCGGAA GACGCGGGTC GCAAGGAGGC GGCCTCGGCT 
CCGACGACGG GCGGCCGCGG GAAGCAGGCG GAGAAGCGGC TGCCCGGCCC GGACGAGCTG 
TTCCGCAGCG TGACCCGCCC GGCCTTCCTC TACAACCCGC TCAACAAGCA GATCGACTGG 
GAGCGGCATG TGGTGAAAGC GCCGGAGGAG CCTCCAAAGG AGTTCAAGAT CTGGAAGTCC 
AACTGCGTGC CGCCCCCAGA GACCTACACT ACTGAGAAGA AGCCGCCGCC GCCAGAGCTG 
GACATGGCGA TCAAATGGTC GAATATCTAT GAAGACAATG GAGACGATGC CCCACAGAAC 
GCCAAGAAAG CCAGGCTTCT GCCTGAAGGG GAGGAGACAG TGGAATCAGA TGATGACAAA 
GATGAGCGGG CATCTAAGAT TCGCAGAGTG GAGCCAGGAG AAGCAGCCAA GAAGAAGAAG 
TAG

The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.

RefSeq NP_079831.1
CDS28..570
Translation

Target ORF information:

RefSeq Version NM_025555.4
Organism Mus musculus(House mouse)
Definition Mus musculus RIKEN cDNA 2410004B18 gene (2410004B18Rik), mRNA.

Target ORF information:

Epitope DYKDDDDK
Bacterial selection AMPR
Mammalian selection NeoR
Vector pcDNA3.1+/C-(K)DYK
 NM_025555.4

ORF Insert Sequence:

1
61
121
181
241
301
361
421
481
541
ATGGCAGCCG AAGAGAAGGA CCCGTTGAGC TACTTCGCGG CTTACGGGAG CAGCAGCTCC 
GACTCGTCGG ATGAGAACAG CGAGCCGGAA GACGCGGGTC GCAAGGAGGC GGCCTCGGCT 
CCGACGACGG GCGGCCGCGG GAAGCAGGCG GAGAAGCGGC TGCCCGGCCC GGACGAGCTG 
TTCCGCAGCG TGACCCGCCC GGCCTTCCTC TACAACCCGC TCAACAAGCA GATCGACTGG 
GAGCGGCATG TGGTGAAAGC GCCGGAGGAG CCTCCAAAGG AGTTCAAGAT CTGGAAGTCC 
AACTGCGTGC CGCCCCCAGA GACCTACACT ACTGAGAAGA AGCCGCCGCC GCCAGAGCTG 
GACATGGCGA TCAAATGGTC GAATATCTAT GAAGACAATG GAGACGATGC CCCACAGAAC 
GCCAAGAAAG CCAGGCTTCT GCCTGAAGGG GAGGAGACAG TGGAATCAGA TGATGACAAA 
GATGAGCGGG CATCTAAGAT TCGCAGAGTG GAGCCAGGAG AAGCAGCCAA GAAGAAGAAG 
TAG

The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.

CloneID OMu00664
Clone ID Related Accession (Same CDS sequence) NM_025555.4 , NM_025555.5
Accession Version NM_025555.5 Latest version! Documents for ORF clone product in default vector
Sequence Information ORF Nucleotide Sequence (Length: 543bp)
Protein sequence
SNP
Vector pcDNA3.1+/C-(K)DYK or customized vector User Manual
Clone information Clone Map MSDS
Tag on pcDNA3.1+/C-(K)DYK C terminal DYKDDDDK tags
ORF Insert Method CloneEZ™ Seamless cloning technology
Insert Structure linear
Update Date 2018-09-29
Organism Mus musculus(house mouse)
Product UPF0690 protein C1orf52 homolog isoform 1
Comment Comment: VALIDATED REFSEQ: This record has undergone validation or preliminary review. The reference sequence was derived from AC123684.8. On Sep 28, 2017 this sequence version replaced NM_025555.4. Sequence Note: The RefSeq transcript and protein were derived from genomic sequence to make the sequence consistent with the reference genome assembly. The genomic coordinates used for the transcript record were based on alignments. ##Evidence-Data-START## Transcript exon combination :: SRR1660815.483844.1, AK010378.1 [ECO:0000332] RNAseq introns :: single sample supports all introns SAMN00849374, SAMN00849375 [ECO:0000348] ##Evidence-Data-END## COMPLETENESS: complete on the 3' end. 

1
61
121
181
241
301
361
421
481
541
ATGGCAGCCG AAGAGAAGGA CCCGTTGAGC TACTTCGCGG CTTACGGGAG CAGCAGCTCC 
GACTCGTCGG ATGAGAACAG CGAGCCGGAA GACGCGGGTC GCAAGGAGGC GGCCTCGGCT 
CCGACGACGG GCGGCCGCGG GAAGCAGGCG GAGAAGCGGC TGCCCGGCCC GGACGAGCTG 
TTCCGCAGCG TGACCCGCCC GGCCTTCCTC TACAACCCGC TCAACAAGCA GATCGACTGG 
GAGCGGCATG TGGTGAAAGC GCCGGAGGAG CCTCCAAAGG AGTTCAAGAT CTGGAAGTCC 
AACTGCGTGC CGCCCCCAGA GACCTACACT ACTGAGAAGA AGCCGCCGCC GCCAGAGCTG 
GACATGGCGA TCAAATGGTC GAATATCTAT GAAGACAATG GAGACGATGC CCCACAGAAC 
GCCAAGAAAG CCAGGCTTCT GCCTGAAGGG GAGGAGACAG TGGAATCAGA TGATGACAAA 
GATGAGCGGG CATCTAAGAT TCGCAGAGTG GAGCCAGGAG AAGCAGCCAA GAAGAAGAAG 
TAG

The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.

RefSeq NP_079831.1
CDS46..588
Translation

Target ORF information:

RefSeq Version NM_025555.5
Organism Mus musculus(house mouse)
Definition Mus musculus RIKEN cDNA 2410004B18 gene (2410004B18Rik), transcript variant 1, mRNA.

Target ORF information:

Epitope DYKDDDDK
Bacterial selection AMPR
Mammalian selection NeoR
Vector pcDNA3.1+/C-(K)DYK
 NM_025555.5

ORF Insert Sequence:

1
61
121
181
241
301
361
421
481
541
ATGGCAGCCG AAGAGAAGGA CCCGTTGAGC TACTTCGCGG CTTACGGGAG CAGCAGCTCC 
GACTCGTCGG ATGAGAACAG CGAGCCGGAA GACGCGGGTC GCAAGGAGGC GGCCTCGGCT 
CCGACGACGG GCGGCCGCGG GAAGCAGGCG GAGAAGCGGC TGCCCGGCCC GGACGAGCTG 
TTCCGCAGCG TGACCCGCCC GGCCTTCCTC TACAACCCGC TCAACAAGCA GATCGACTGG 
GAGCGGCATG TGGTGAAAGC GCCGGAGGAG CCTCCAAAGG AGTTCAAGAT CTGGAAGTCC 
AACTGCGTGC CGCCCCCAGA GACCTACACT ACTGAGAAGA AGCCGCCGCC GCCAGAGCTG 
GACATGGCGA TCAAATGGTC GAATATCTAT GAAGACAATG GAGACGATGC CCCACAGAAC 
GCCAAGAAAG CCAGGCTTCT GCCTGAAGGG GAGGAGACAG TGGAATCAGA TGATGACAAA 
GATGAGCGGG CATCTAAGAT TCGCAGAGTG GAGCCAGGAG AAGCAGCCAA GAAGAAGAAG 
TAG

The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.

PubMed

book

Prediction of Gene Activity in Early B Cell Development Based on an Integrative Multi-Omics Analysis.
Journal of proteomics & bioinformatics7(2014 Feb)
Heydarian M,Luperchio TR,Cutler J,Mitchell CJ,Kim MS,Pandey A,Sollner-Webb B,Reddy K


book

A conditional knockout resource for the genome-wide study of mouse gene function.
Nature474(7351)337-42(2011 Jun)
Skarnes WC,Rosen B,West AP,Koutsourakis M,Bushell W,Iyer V,Mujica AO,Thomas M,Harrow J,Cox T,Jackson D,Severin J,Biggs P,Fu J,Nefedov M,de Jong PJ,Stewart AF,Bradley A


book

Genomic analysis of mouse retinal development.
PLoS biology2(9)E247(2004 Sep)
Blackshaw S,Harpavat S,Trimarchi J,Cai L,Huang H,Kuo WP,Weber G,Lee K,Fraioli RE,Cho SH,Yung R,Asch E,Ohno-Machado L,Wong WH,Cepko CL