Gene Symbol | Srp54b |
Entrez Gene ID | 665155 |
Full Name | signal recognition particle 54B |
General protein information |
|
Gene Type | protein-coding |
Organism | Mus musculus(house mouse) |
Genome |
ORF » Species Summary » Mus musculus » Srp54b cDNA ORF clone
gRNAs
Gene Symbol | Srp54b |
Entrez Gene ID | 665155 |
Full Name | signal recognition particle 54B |
General protein information |
|
Gene Type | protein-coding |
Organism | Mus musculus(house mouse) |
Genome |
mRNA | Protein | Name |
---|---|---|
XM_006516155.3 | XP_006516218.1 | signal recognition particle 54 kDa protein isoform X1 |
NM_001100109.1 | NP_001093579.1 | signal recognition particle 54 kDa protein |
Mus musculus (house mouse) | Srp54a | NP_036029.2 |
Danio rerio (zebrafish) | srp54 | NP_957282.1 |
Anopheles gambiae (African malaria mosquito) | AgaP_AGAP004610 | XP_315212.2 |
Caenorhabditis elegans (roundworm) | F21D5.7 | NP_501507.1 |
Saccharomyces cerevisiae (baker's yeast) | SRP54 | NP_015413.1 |
Kluyveromyces lactis | KLLA0D09020g | XP_453464.1 |
Homo sapiens (human) | SRP54 | NP_003127.1 |
Rattus norvegicus (Norway rat) | Srp54a | NP_446323.1 |
Magnaporthe oryzae (rice blast fungus) | MGG_05977 | XP_003711822.1 |
Arabidopsis thaliana (thale cress) | AT1G48900 | NP_564535.1 |
Canis lupus familiaris (dog) | SRP54 | NP_001003272.1 |
Bos taurus (cattle) | SRP54 | NP_001033290.1 |
Gallus gallus (chicken) | SRP54 | XP_421238.1 |
Schizosaccharomyces pombe (fission yeast) | srp54 | NP_588209.1 |
Neurospora crassa | NCU09696 | XP_960643.1 |
Oryza sativa (rice) | Os01g0772800 | NP_001044395.1 |
Pan troglodytes (chimpanzee) | SRP54 | XP_001136048.1 |
SRP54 | XP_001082531.1 | |
Mus musculus (house mouse) | Srp54b | NP_001093579.1 |
Drosophila melanogaster (fruit fly) | Srp54k | NP_523931.1 |
Eremothecium gossypii | AGOS_AAR041W | NP_982582.2 |
Xenopus tropicalis (tropical clawed frog) | srp54 | NP_988977.1 |
Structure of the signal recognition particle interacting with the elongation-arrested ribosome.
Halic M, Becker T, Pool MR, Spahn CM, Grassucci RA, Frank J, Beckmann R
Nature427(6977)808-14(2004 Feb)
The methionine-rich domain of the 54 kd protein subunit of the signal recognition particle contains an RNA binding site and can be crosslinked to a signal sequence.
Zopf D, Bernstein HD, Johnson AE, Walter P
The EMBO journal9(13)4511-7(1990 Dec)
Model for signal sequence recognition from amino-acid sequence of 54K subunit of signal recognition particle.
Bernstein HD, Poritz MA, Strub K, Hoben PJ, Brenner S, Walter P
Nature340(6233)482-6(1989 Aug)
GeneRIFs: Gene References Into Functions What's a GeneRIF?
The following Srp54b gene cDNA ORF clone sequences were retrieved from the NCBI Reference Sequence Database (RefSeq). These sequences represent the protein coding region of the Srp54b cDNA ORF which is encoded by the open reading frame (ORF) sequence. ORF sequences can be delivered in our standard vector, pcDNA3.1+/C-(K)DYK or the vector of your choice as an expression/transfection-ready ORF clone. Not the clone you want? Click here to find your clone.
CloneID | OMu03443 | |
Clone ID Related Accession (Same CDS sequence) | NM_001100109.1 | |
Accession Version | NM_001100109.1 Latest version! | Documents for ORF clone product in default vector |
Sequence Information | ORF Nucleotide Sequence (Length: 1515bp) Protein sequence SNP |
|
Vector | pcDNA3.1-C-(k)DYK or customized vector | ![]() |
Clone information | Clone Map | ![]() |
Tag on pcDNA3.1+/C-(K)DYK | C terminal DYKDDDDK tags | |
ORF Insert Method | CloneEZ™ Seamless cloning technology | |
Insert Structure | linear | |
Update Date | 2019-01-19 | |
Organism | Mus musculus(house mouse) | |
Product | signal recognition particle 54 kDa protein | |
Comment | Comment: PROVISIONAL REFSEQ: This record has not yet been subject to final NCBI review. The reference sequence was derived from AK136033.1. On or before Jul 26, 2007 this sequence version replaced XM_001479059.1, XM_976391.2. ##Evidence-Data-START## Transcript exon combination :: SRR1660815.54090.1, SRR1660819.152885.1 [ECO:0000332] RNAseq introns :: single sample supports all introns SAMN00849374, SAMN00849375 [ECO:0000348] ##Evidence-Data-END## |
1 | ATGGTTCTAG CAGATCTTGG AAGAAAAATA ACATCAGCAT TACGCTCATT GAGCAATGCC |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
RefSeq | NP_001093579.1 |
CDS | 510..2024 |
Translation |
Target ORF information:
Target ORF information:
|
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1 | ATGGTTCTAG CAGATCTTGG AAGAAAAATA ACATCAGCAT TACGCTCATT GAGCAATGCC |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
CloneID | OMu47842 | |
Clone ID Related Accession (Same CDS sequence) | XM_006516155.3 | |
Accession Version | XM_006516155.3 Latest version! | Documents for ORF clone product in default vector |
Sequence Information | ORF Nucleotide Sequence (Length: 1098bp) Protein sequence SNP |
|
Vector | pcDNA3.1-C-(k)DYK or customized vector | ![]() |
Clone information | Clone Map | ![]() |
Tag on pcDNA3.1+/C-(K)DYK | C terminal DYKDDDDK tags | |
ORF Insert Method | CloneEZ™ Seamless cloning technology | |
Insert Structure | linear | |
Update Date | 2016-06-21 | |
Organism | Mus musculus(house mouse) | |
Product | signal recognition particle 54 kDa protein isoform X1 | |
Comment | Comment: MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NC_000078.6) annotated using gene prediction method: Gnomon, supported by EST evidence. Also see: Documentation of NCBI's Annotation Process On Jun 22, 2016 this sequence version replaced XM_006516155.2. ##Genome-Annotation-Data-START## Annotation Provider :: NCBI Annotation Status :: Full annotation Annotation Version :: Mus musculus Annotation Release 106 Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline Annotation Software Version :: 7.1 Annotation Method :: Best-placed RefSeq; Gnomon Features Annotated :: Gene; mRNA; CDS; ncRNA ##Genome-Annotation-Data-END## |
1 | ATGTTCAAAG GAGCCTTTGA CCAGCTAAAA CAGAATGCCA CCAAAGCAAG AATTCCGTTC |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
RefSeq | XP_006516218.1 |
CDS | 85..1182 |
Translation |
Target ORF information:
Target ORF information:
|
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1 | ATGTTCAAAG GAGCCTTTGA CCAGCTAAAA CAGAATGCCA CCAAAGCAAG AATTCCGTTC |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
Structure of the signal recognition particle interacting with the elongation-arrested ribosome. |
The methionine-rich domain of the 54 kd protein subunit of the signal recognition particle contains an RNA binding site and can be crosslinked to a signal sequence. |
Model for signal sequence recognition from amino-acid sequence of 54K subunit of signal recognition particle. |